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Cow genome map

           
Conread name:
           
Ss1.1-Lym1-jns55_D05.f.5
        

               
Conread position:
               
24-405
               

               
Cow position:
               
chr11:32432229-32431850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
5, 46
               

               
Conread position:
               
116-361
               

               
Cow position:
               
chr11:82940620-82940860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
119-405
               

               
Cow position:
               
chr11:70483858-70484148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
121-392
               

               
Cow position:
               
chr11:6400078-6400345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
75, 7
               

               
Conread position:
               
122-405
               

               
Cow position:
               
chr11:74316710-74316420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
127-379
               

               
Cow position:
               
chr11:31525862-31525604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
30, 212
               

               
Conread position:
               
127-403
               

               
Cow position:
               
chr11:36981550-36981283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
127-404
               

               
Cow position:
               
chr11:3780431-3780710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
68, 128
               

               
Conread position:
               
127-404
               

               
Cow position:
               
chr11:68909859-68910132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 154
               

               
Conread position:
               
127-404
               

               
Cow position:
               
chr11:77745265-77745539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
68, 45
               

               
Conread position:
               
127-405
               

               
Cow position:
               
chr11:4323345-4323080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
69, 33
               

               
Conread position:
               
127-406
               

               
Cow position:
               
chr11:42835970-42836250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
70, 49
               

               
Conread position:
               
130-375
               

               
Cow position:
               
chr11:75480036-75480283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 116
               

               
Conread position:
               
130-392
               

               
Cow position:
               
chr11:53773665-53773399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
130-403
               

               
Cow position:
               
chr11:70382706-70382979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
65, 30
               

               
Conread position:
               
132-405
               

               
Cow position:
               
chr11:81066602-81066868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
133-372
               

               
Cow position:
               
chr11:66188336-66188575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 103
               

               
Conread position:
               
133-392
               

               
Cow position:
               
chr11:11232472-11232728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 27
               

               
Conread position:
               
133-392
               

               
Cow position:
               
chr11:63469856-63469610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
133-395
               

               
Cow position:
               
chr11:6154390-6154136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
133-404
               

               
Cow position:
               
chr11:67600765-67600482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
133-405
               

               
Cow position:
               
chr11:41159-40895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
116, 36
               

               
Conread position:
               
133-405
               

               
Cow position:
               
chr11:2309853-2309589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
133-405
               

               
Cow position:
               
chr11:20761828-20761559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
133-405
               

               
Cow position:
               
chr11:43914196-43913936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
133-405
               

               
Cow position:
               
chr11:44031986-44031713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 47
               

               
Conread position:
               
134-404
               

               
Cow position:
               
chr11:23128560-23128821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 26
               

               
Conread position:
               
135-383
               

               
Cow position:
               
chr11:47545113-47544863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
59, 45
               

               
Conread position:
               
135-405
               

               
Cow position:
               
chr11:955346-955078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 32
               

               
Conread position:
               
135-405
               

               
Cow position:
               
chr11:27248472-27248206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
135-406
               

               
Cow position:
               
chr11:35580239-35579966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
140-403
               

               
Cow position:
               
chr11:3833377-3833632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
141-374
               

               
Cow position:
               
chr11:35153847-35154083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
142-372
               

               
Cow position:
               
chr11:63520746-63520520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
52, 33
               

               
Conread position:
               
150-392
               

               
Cow position:
               
chr11:17227684-17227913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
150-401
               

               
Cow position:
               
chr11:43898108-43897855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 76
               

               
Conread position:
               
151-401
               

               
Cow position:
               
chr11:56654518-56654266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
15, 153
               

               
Conread position:
               
151-405
               

               
Cow position:
               
chr11:8827742-8827493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
90, 18
               

               
Conread position:
               
151-405
               

               
Cow position:
               
chr11:77758790-77759046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
8, 23
               

               
Conread position:
               
151-406
               

               
Cow position:
               
chr11:36182657-36182401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
43, 108
               

               
Conread position:
               
152-405
               

               
Cow position:
               
chr11:62019626-62019885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
152-405
               

               
Cow position:
               
chr11:68206879-68207122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
86, 10
               

               
Conread position:
               
153-390
               

               
Cow position:
               
chr11:66041239-66041002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
16, 91
               

               
Conread position:
               
153-392
               

               
Cow position:
               
chr11:62155593-62155357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
43, 139
               

               
Conread position:
               
153-404
               

               
Cow position:
               
chr11:1668643-1668389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
27, 104
               

               
Conread position:
               
154-392
               

               
Cow position:
               
chr11:8105746-8105509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
12, 135
               

               
Conread position:
               
154-397
               

               
Cow position:
               
chr11:1362511-1362759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
154-400
               

               
Cow position:
               
chr11:23138093-23138342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
24, 35
               

               
Conread position:
               
155-402
               

               
Cow position:
               
chr11:40818673-40818928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
14, 137
               

               
Conread position:
               
155-406
               

               
Cow position:
               
chr11:29946968-29947214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
156-390
               

               
Cow position:
               
chr11:30708467-30708232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 133
               

               
Conread position:
               
156-405
               

               
Cow position:
               
chr11:66733790-66733549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
93, 43
               

               
Conread position:
               
158-405
               

               
Cow position:
               
chr11:77750809-77751052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
18, 103
               

               
Conread position:
               
161-400
               

               
Cow position:
               
chr11:62979446-62979196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
161-405
               

               
Cow position:
               
chr11:41811955-41812198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
162-328
               

               
Cow position:
               
chr11:61958789-61958959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
162-353
               

               
Cow position:
               
chr11:18341084-18341273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
162-372
               

               
Cow position:
               
chr11:49152907-49152700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
31, 10
               

               
Conread position:
               
162-383
               

               
Cow position:
               
chr11:27746881-27746653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 81
               

               
Conread position:
               
162-392
               

               
Cow position:
               
chr11:27462435-27462658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 133
               

               
Conread position:
               
162-395
               

               
Cow position:
               
chr11:8428467-8428218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
32, 136
               

               
Conread position:
               
162-395
               

               
Cow position:
               
chr11:33341189-33341422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
16, 95
               

               
Conread position:
               
162-395
               

               
Cow position:
               
chr11:48697403-48697171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 47
               

               
Conread position:
               
162-397
               

               
Cow position:
               
chr11:75748390-75748157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
162-402
               

               
Cow position:
               
chr11:77241327-77241097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
162-403
               

               
Cow position:
               
chr11:83196455-83196217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
34, 94
               

               
Conread position:
               
162-404
               

               
Cow position:
               
chr11:30110919-30110686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
34, 82
               

               
Conread position:
               
162-405
               

               
Cow position:
               
chr11:1485400-1485647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
32, 10
               

               
Conread position:
               
162-405
               

               
Cow position:
               
chr11:7924633-7924875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
162-405
               

               
Cow position:
               
chr11:9837142-9837383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 130
               

               
Conread position:
               
162-405
               

               
Cow position:
               
chr11:37974882-37974639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 80
               

               
Conread position:
               
162-405
               

               
Cow position:
               
chr11:40459067-40458834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
162-405
               

               
Cow position:
               
chr11:58588303-58588057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
162-405
               

               
Cow position:
               
chr11:65970416-65970168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
162-405
               

               
Cow position:
               
chr11:67747241-67746991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
162-405
               

               
Cow position:
               
chr11:70459519-70459288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
162-405
               

               
Cow position:
               
chr11:80530326-80530084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
16, 131
               

               
Conread position:
               
163-383
               

               
Cow position:
               
chr11:36194251-36194028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
13, 158
               

               
Conread position:
               
163-392
               

               
Cow position:
               
chr11:75355565-75355336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
8, 92
               

               
Conread position:
               
163-399
               

               
Cow position:
               
chr11:84385680-84385923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
31, 189
               

               
Conread position:
               
163-403
               

               
Cow position:
               
chr11:43430501-43430731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
163-405
               

               
Cow position:
               
chr11:7315170-7315413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
14, 140
               

               
Conread position:
               
163-405
               

               
Cow position:
               
chr11:14649355-14649599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
28, 113
               

               
Conread position:
               
163-405
               

               
Cow position:
               
chr11:64029306-64029542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 43
               

               
Conread position:
               
164-405
               

               
Cow position:
               
chr11:42016676-42016925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
164-405
               

               
Cow position:
               
chr11:71846389-71846635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
168-403
               

               
Cow position:
               
chr11:71168639-71168862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
28, 58
               

               
Conread position:
               
169-377
               

               
Cow position:
               
chr11:41426862-41426655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
72, 120
               

               
Conread position:
               
169-392
               

               
Cow position:
               
chr11:47193469-47193250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 58
               

               
Conread position:
               
169-404
               

               
Cow position:
               
chr11:7590143-7589905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
169-404
               

               
Cow position:
               
chr11:19508245-19508011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
169-404
               

               
Cow position:
               
chr11:21844185-21844418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
25, 85
               

               
Conread position:
               
169-404
               

               
Cow position:
               
chr11:38194104-38193866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
169-405
               

               
Cow position:
               
chr11:5031824-5032063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
27, 203
               

               
Conread position:
               
169-405
               

               
Cow position:
               
chr11:12528668-12528882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
169-405
               

               
Cow position:
               
chr11:18484222-18484446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
169-405
               

               
Cow position:
               
chr11:49106007-49105771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 116
               

               
Conread position:
               
169-405
               

               
Cow position:
               
chr11:53719893-53719659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
169-405
               

               
Cow position:
               
chr11:58990453-58990224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
169-405
               

               
Cow position:
               
chr11:77705705-77705478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
24, 74
               

               
Conread position:
               
169-440
               

               
Cow position:
               
chr11:57111357-57111628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
172-373
               

               
Cow position:
               
chr11:33310919-33310715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 120
               

               
Conread position:
               
172-388
               

               
Cow position:
               
chr11:38810399-38810620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
172-390
               

               
Cow position:
               
chr11:52380927-52381142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
21, 71
               

               
Conread position:
               
172-390
               

               
Cow position:
               
chr11:71455740-71455516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
172-396
               

               
Cow position:
               
chr11:35276248-35276023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
8, 52
               

               
Conread position:
               
172-405
               

               
Cow position:
               
chr11:18086390-18086624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
172-405
               

               
Cow position:
               
chr11:63065605-63065367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
173-406
               

               
Cow position:
               
chr11:47586403-47586635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
174-392
               

               
Cow position:
               
chr11:17831276-17831501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
19, 64
               

               
Conread position:
               
175-392
               

               
Cow position:
               
chr11:10992225-10992006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
175-396
               

               
Cow position:
               
chr11:3175326-3175102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
21, 203
               

               
Conread position:
               
175-397
               

               
Cow position:
               
chr11:2281350-2281565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
66, 32
               

               
Conread position:
               
175-400
               

               
Cow position:
               
chr11:65826799-65827013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
175-405
               

               
Cow position:
               
chr11:8840802-8841027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
175-405
               

               
Cow position:
               
chr11:53130755-53130526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
21, 115
               

               
Conread position:
               
175-405
               

               
Cow position:
               
chr11:62749811-62750036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 40
               

               
Conread position:
               
175-405
               

               
Cow position:
               
chr11:81174834-81174604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
21, 115
               

               
Conread position:
               
176-341
               

               
Cow position:
               
chr11:17661035-17660872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
176-341
               

               
Cow position:
               
chr11:23586578-23586413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
176-351
               

               
Cow position:
               
chr11:32436274-32436096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
176-372
               

               
Cow position:
               
chr11:42793030-42793229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
18, 80
               

               
Conread position:
               
176-377
               

               
Cow position:
               
chr11:36647300-36647102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
176-378
               

               
Cow position:
               
chr11:63516769-63516563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
176-383
               

               
Cow position:
               
chr11:63482483-63482690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
176-384
               

               
Cow position:
               
chr11:36799359-36799561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 106
               

               
Conread position:
               
176-387
               

               
Cow position:
               
chr11:84924152-84924364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
19, 196
               

               
Conread position:
               
176-388
               

               
Cow position:
               
chr11:45898110-45898325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
176-389
               

               
Cow position:
               
chr11:19247257-19247466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
176-390
               

               
Cow position:
               
chr11:377701-377922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
176-391
               

               
Cow position:
               
chr11:12555468-12555690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
20, 126
               

               
Conread position:
               
176-392
               

               
Cow position:
               
chr11:45631819-45632038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
176-392
               

               
Cow position:
               
chr11:59155937-59156144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
176-396
               

               
Cow position:
               
chr11:10388655-10388874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
20, 98
               

               
Conread position:
               
176-396
               

               
Cow position:
               
chr11:48901138-48901355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 59
               

               
Conread position:
               
176-396
               

               
Cow position:
               
chr11:51043988-51044214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
176-398
               

               
Cow position:
               
chr11:81614698-81614911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
176-399
               

               
Cow position:
               
chr11:26535719-26535495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
176-399
               

               
Cow position:
               
chr11:68570723-68570952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
20, 133
               

               
Conread position:
               
176-400
               

               
Cow position:
               
chr11:41577071-41577286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
176-400
               

               
Cow position:
               
chr11:61203107-61202883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 56
               

               
Conread position:
               
176-400
               

               
Cow position:
               
chr11:73354111-73354337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
20, 114
               

               
Conread position:
               
176-400
               

               
Cow position:
               
chr11:76114594-76114373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
160, 123
               

               
Conread position:
               
176-401
               

               
Cow position:
               
chr11:27386399-27386622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
20, 109
               

               
Conread position:
               
176-401
               

               
Cow position:
               
chr11:30879620-30879395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
176-401
               

               
Cow position:
               
chr11:42083414-42083201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
176-401
               

               
Cow position:
               
chr11:55761813-55761597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 59
               

               
Conread position:
               
176-401
               

               
Cow position:
               
chr11:60470234-60470462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
25, 131
               

               
Conread position:
               
176-402
               

               
Cow position:
               
chr11:6233937-6234162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
19, 122
               

               
Conread position:
               
176-402
               

               
Cow position:
               
chr11:17321602-17321378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
176-402
               

               
Cow position:
               
chr11:18572744-18572520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
176-402
               

               
Cow position:
               
chr11:54334276-54334051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
20, 93
               

               
Conread position:
               
176-402
               

               
Cow position:
               
chr11:65409212-65409441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
24, 67
               

               
Conread position:
               
176-402
               

               
Cow position:
               
chr11:70609729-70609504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
19, 119
               

               
Conread position:
               
176-403
               

               
Cow position:
               
chr11:4674502-4674735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
176-403
               

               
Cow position:
               
chr11:17192339-17192564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
176-403
               

               
Cow position:
               
chr11:37347422-37347191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
20, 164
               

               
Conread position:
               
176-404
               

               
Cow position:
               
chr11:9221785-9222011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
20, 56
               

               
Conread position:
               
176-404
               

               
Cow position:
               
chr11:85764881-85764665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:10076710-10076488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 114
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:17112691-17112913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:18698820-18698588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:23232572-23232799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:26483657-26483433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 114
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:27939425-27939200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 66
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:32609945-32609705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:33753961-33754185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 114
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:34113206-34112989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:34963007-34962776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
17, 69
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:35363441-35363209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
17, 196
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:37068373-37068590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
69, 25
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:43360840-43361087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
20, 211
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:49148981-49148763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:53778558-53778326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
20, 109
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:56821308-56821542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 198
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:58102834-58103061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:58614605-58614374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
13, 68
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:59872874-59872640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
17, 66
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:63847791-63847565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:70273248-70273017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
14, 112
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:74929726-74929494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
14, 196
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:83066437-83066209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
18, 80
               

               
Conread position:
               
176-407
               

               
Cow position:
               
chr11:18210403-18210635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
176-408
               

               
Cow position:
               
chr11:70745586-70745825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 202
               

               
Conread position:
               
176-444
               

               
Cow position:
               
chr11:73478562-73478301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 67
               

               
Conread position:
               
177-362
               

               
Cow position:
               
chr11:33348242-33348430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 114
               

               
Conread position:
               
177-362
               

               
Cow position:
               
chr11:62808707-62808892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
19, 125
               

               
Conread position:
               
177-392
               

               
Cow position:
               
chr11:17278724-17278935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
28, 112
               

               
Conread position:
               
177-397
               

               
Cow position:
               
chr11:34829840-34830058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
177-397
               

               
Cow position:
               
chr11:77207988-77207770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
19, 56
               

               
Conread position:
               
177-398
               

               
Cow position:
               
chr11:34467528-34467319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
197, 25
               

               
Conread position:
               
177-401
               

               
Cow position:
               
chr11:41983511-41983729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
177-402
               

               
Cow position:
               
chr11:8339466-8339688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
177-404
               

               
Cow position:
               
chr11:48474645-48474421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
19, 121
               

               
Conread position:
               
177-405
               

               
Cow position:
               
chr11:44642347-44642572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
177-405
               

               
Cow position:
               
chr11:47165202-47165423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
64, 20
               

               
Conread position:
               
177-405
               

               
Cow position:
               
chr11:48932643-48932869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
177-405
               

               
Cow position:
               
chr11:56518367-56518599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 66
               

               
Conread position:
               
177-405
               

               
Cow position:
               
chr11:61454586-61454821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
178-364
               

               
Cow position:
               
chr11:47899220-47899031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
178-387
               

               
Cow position:
               
chr11:34032261-34032464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
178-392
               

               
Cow position:
               
chr11:15632615-15632829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
178-392
               

               
Cow position:
               
chr11:79728728-79728947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
178-395
               

               
Cow position:
               
chr11:35347812-35348034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
178-397
               

               
Cow position:
               
chr11:45646654-45646869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
19, 111
               

               
Conread position:
               
178-401
               

               
Cow position:
               
chr11:35684554-35684781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
178-401
               

               
Cow position:
               
chr11:37292801-37292574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
178-401
               

               
Cow position:
               
chr11:50152875-50153100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 60
               

               
Conread position:
               
178-402
               

               
Cow position:
               
chr11:84890809-84891035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
178-403
               

               
Cow position:
               
chr11:48272138-48271911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
178-403
               

               
Cow position:
               
chr11:87155460-87155228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
178-404
               

               
Cow position:
               
chr11:3393271-3393495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
18, 76
               

               
Conread position:
               
178-404
               

               
Cow position:
               
chr11:30120725-30120948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
178-404
               

               
Cow position:
               
chr11:31352628-31352856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
16, 80
               

               
Conread position:
               
178-404
               

               
Cow position:
               
chr11:38009874-38010097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
178-404
               

               
Cow position:
               
chr11:50778314-50778084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
178-404
               

               
Cow position:
               
chr11:59702425-59702199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
18, 76
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr11:16251306-16251536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr11:17889785-17890009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 62
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr11:25165383-25165159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
16, 111
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr11:25387005-25386784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 79
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr11:31413394-31413164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
18, 42
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr11:32750055-32749821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr11:39115434-39115209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr11:41986103-41986330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr11:42291894-42292122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr11:44636817-44637047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr11:51756251-51756029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr11:65693897-65694123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr11:73512496-73512706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr11:73924621-73924845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr11:80923383-80923622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
15, 78
               

               
Conread position:
               
178-408
               

               
Cow position:
               
chr11:4384562-4384336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
18, 96
               

               
Conread position:
               
179-361
               

               
Cow position:
               
chr11:57724883-57725071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
179-392
               

               
Cow position:
               
chr11:44819042-44818823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
179-396
               

               
Cow position:
               
chr11:71309588-71309806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 132
               

               
Conread position:
               
179-398
               

               
Cow position:
               
chr11:81143610-81143838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
179-401
               

               
Cow position:
               
chr11:41598785-41599010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 64
               

               
Conread position:
               
179-402
               

               
Cow position:
               
chr11:18588646-18588865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 37
               

               
Conread position:
               
179-402
               

               
Cow position:
               
chr11:64638589-64638807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 107
               

               
Conread position:
               
179-402
               

               
Cow position:
               
chr11:81300670-81300896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
179-403
               

               
Cow position:
               
chr11:23251652-23251888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 197
               

               
Conread position:
               
179-404
               

               
Cow position:
               
chr11:55333851-55333624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
16, 77
               

               
Conread position:
               
179-405
               

               
Cow position:
               
chr11:439725-439945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
179-405
               

               
Cow position:
               
chr11:13191165-13190933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
15, 187
               

               
Conread position:
               
179-405
               

               
Cow position:
               
chr11:15504046-15503815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
16, 221
               

               
Conread position:
               
179-405
               

               
Cow position:
               
chr11:21894217-21894440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
179-405
               

               
Cow position:
               
chr11:25319993-25319764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
17, 64
               

               
Conread position:
               
179-405
               

               
Cow position:
               
chr11:25791751-25791979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
179-405
               

               
Cow position:
               
chr11:31900986-31900762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
15, 120
               

               
Conread position:
               
179-405
               

               
Cow position:
               
chr11:48672653-48672422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
17, 181
               

               
Conread position:
               
179-405
               

               
Cow position:
               
chr11:65857799-65857571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 64
               

               
Conread position:
               
180-374
               

               
Cow position:
               
chr11:81281886-81281690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 63
               

               
Conread position:
               
180-397
               

               
Cow position:
               
chr11:32378126-32377909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 122
               

               
Conread position:
               
180-398
               

               
Cow position:
               
chr11:39057567-39057359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
180-403
               

               
Cow position:
               
chr11:80761440-80761664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 142
               

               
Conread position:
               
180-404
               

               
Cow position:
               
chr11:3720192-3719966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
180-405
               

               
Cow position:
               
chr11:4732281-4732052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
15, 88
               

               
Conread position:
               
180-405
               

               
Cow position:
               
chr11:8495981-8495751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 190
               

               
Conread position:
               
180-405
               

               
Cow position:
               
chr11:17968644-17968862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
180-405
               

               
Cow position:
               
chr11:40467179-40467410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
15, 95
               

               
Conread position:
               
180-405
               

               
Cow position:
               
chr11:54856566-54856348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 36
               

               
Conread position:
               
180-406
               

               
Cow position:
               
chr11:53313634-53313856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
24, 38
               

               
Conread position:
               
181-375
               

               
Cow position:
               
chr11:3726226-3726029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 111
               

               
Conread position:
               
181-405
               

               
Cow position:
               
chr11:34413036-34412810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 111
               

               
Conread position:
               
182-405
               

               
Cow position:
               
chr11:32595404-32595180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
13, 6
               

               
Conread position:
               
183-376
               

               
Cow position:
               
chr11:45872381-45872576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
13, 109
               

               
Conread position:
               
183-384
               

               
Cow position:
               
chr11:62045332-62045133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
183-387
               

               
Cow position:
               
chr11:25337012-25336807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
13, 72
               

               
Conread position:
               
183-395
               

               
Cow position:
               
chr11:81138159-81137945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
12, 97
               

               
Conread position:
               
183-398
               

               
Cow position:
               
chr11:21549419-21549216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
183-401
               

               
Cow position:
               
chr11:67931555-67931777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
12, 143
               

               
Conread position:
               
183-403
               

               
Cow position:
               
chr11:66896861-66897084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 142
               

               
Conread position:
               
183-404
               

               
Cow position:
               
chr11:25745258-25745036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
12, 42
               

               
Conread position:
               
183-404
               

               
Cow position:
               
chr11:35149099-35148883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 112
               

               
Conread position:
               
183-405
               

               
Cow position:
               
chr11:866236-866010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
183-405
               

               
Cow position:
               
chr11:6835466-6835241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 72
               

               
Conread position:
               
183-405
               

               
Cow position:
               
chr11:7247946-7248163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
183-405
               

               
Cow position:
               
chr11:17860218-17860440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
13, 60
               

               
Conread position:
               
183-405
               

               
Cow position:
               
chr11:21856897-21856673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 56
               

               
Conread position:
               
183-405
               

               
Cow position:
               
chr11:34616204-34615982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
13, 107
               

               
Conread position:
               
183-405
               

               
Cow position:
               
chr11:41239335-41239558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 184
               

               
Conread position:
               
183-405
               

               
Cow position:
               
chr11:62965616-62965840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
10, 91
               

               
Conread position:
               
183-405
               

               
Cow position:
               
chr11:67345715-67345931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
57, 21
               

               
Conread position:
               
183-406
               

               
Cow position:
               
chr11:43524555-43524335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
183-413
               

               
Cow position:
               
chr11:63518947-63518717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
11, 43
               

               
Conread position:
               
183-414
               

               
Cow position:
               
chr11:30721029-30720802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
184-401
               

               
Cow position:
               
chr11:4436261-4436050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
11, 94
               

               
Conread position:
               
184-405
               

               
Cow position:
               
chr11:33414172-33413947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
11, 93
               

               
Conread position:
               
185-403
               

               
Cow position:
               
chr11:5481559-5481782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
185-404
               

               
Cow position:
               
chr11:74847547-74847770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr11:12316149-12316373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr11:12353006-12353230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr11:17981348-17981123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
9, 212
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr11:29662177-29662400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr11:32076204-32076428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr11:35737474-35737696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr11:39163214-39162990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr11:43593926-43593706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 105
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr11:44153201-44153420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr11:51299668-51299892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr11:54178599-54178824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
186-399
               

               
Cow position:
               
chr11:10127691-10127894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
186-405
               

               
Cow position:
               
chr11:32198867-32198654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
53, 18
               

               
Conread position:
               
188-405
               

               
Cow position:
               
chr11:30192101-30191883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
35, 14
               

               
Conread position:
               
191-405
               

               
Cow position:
               
chr11:2422343-2422130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
192-396
               

               
Cow position:
               
chr11:44234276-44234081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
192-397
               

               
Cow position:
               
chr11:46746555-46746357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
192-400
               

               
Cow position:
               
chr11:4412091-4412301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
52, 48
               

               
Conread position:
               
192-403
               

               
Cow position:
               
chr11:46747940-46748153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 48
               

               
Conread position:
               
192-405
               

               
Cow position:
               
chr11:16910439-16910655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
192-405
               

               
Cow position:
               
chr11:71868682-71868890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
192-405
               

               
Cow position:
               
chr11:85723625-85723415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
193-346
               

               
Cow position:
               
chr11:19755584-19755429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
48, 16
               

               
Conread position:
               
193-362
               

               
Cow position:
               
chr11:5677648-5677477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
48, 23
               

               
Conread position:
               
193-377
               

               
Cow position:
               
chr11:56728871-56728688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
56, 42
               

               
Conread position:
               
193-381
               

               
Cow position:
               
chr11:30764408-30764217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
193-389
               

               
Cow position:
               
chr11:24937586-24937392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
193-389
               

               
Cow position:
               
chr11:29916454-29916266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
192, 60
               

               
Conread position:
               
193-394
               

               
Cow position:
               
chr11:50951477-50951275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
193-396
               

               
Cow position:
               
chr11:51687802-51688003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
51, 46
               

               
Conread position:
               
193-397
               

               
Cow position:
               
chr11:30475925-30475721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
48, 8
               

               
Conread position:
               
193-401
               

               
Cow position:
               
chr11:31138473-31138679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
51, 43
               

               
Conread position:
               
193-401
               

               
Cow position:
               
chr11:37118412-37118202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
48, 153
               

               
Conread position:
               
193-402
               

               
Cow position:
               
chr11:1071170-1071375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
193-402
               

               
Cow position:
               
chr11:18244015-18244225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
51, 46
               

               
Conread position:
               
193-402
               

               
Cow position:
               
chr11:38236166-38235960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
50, 60
               

               
Conread position:
               
193-403
               

               
Cow position:
               
chr11:10875949-10875738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
54, 46
               

               
Conread position:
               
193-403
               

               
Cow position:
               
chr11:60302038-60302242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
193-404
               

               
Cow position:
               
chr11:952190-951983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
193-404
               

               
Cow position:
               
chr11:30934347-30934140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
43, 99
               

               
Conread position:
               
193-404
               

               
Cow position:
               
chr11:48650718-48650509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
54, 88
               

               
Conread position:
               
193-404
               

               
Cow position:
               
chr11:67804676-67804465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
14, 166
               

               
Conread position:
               
193-404
               

               
Cow position:
               
chr11:79019600-79019801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
48, 60
               

               
Conread position:
               
193-404
               

               
Cow position:
               
chr11:85189459-85189672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 30
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr11:5197152-5197364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
51, 46
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr11:6580740-6580527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 46
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr11:8564048-8564261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr11:10302267-10302475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 86
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr11:11991868-11991659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr11:16226626-16226419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
51, 46
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr11:19098615-19098827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr11:24601896-24601680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
56, 47
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr11:28644007-28643795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
69, 94
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr11:33349773-33349988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr11:35238757-35238542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr11:38639042-38638836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
55, 47
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr11:38843490-38843277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr11:41809557-41809763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr11:46329420-46329213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr11:50112111-50111905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 53
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr11:62490355-62490147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr11:70304006-70303800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
48, 79
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr11:75195271-75195480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
193-406
               

               
Cow position:
               
chr11:80787986-80788198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
48, 97
               

               
Conread position:
               
193-433
               

               
Cow position:
               
chr11:2788305-2788070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
48, 97
               

               
Conread position:
               
194-404
               

               
Cow position:
               
chr11:70838371-70838588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
47, 82
               

               
Conread position:
               
195-392
               

               
Cow position:
               
chr11:51144636-51144444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
195-401
               

               
Cow position:
               
chr11:13061309-13061506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
195-405
               

               
Cow position:
               
chr11:13499937-13499728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
41, 95
               

               
Conread position:
               
196-402
               

               
Cow position:
               
chr11:64090164-64090370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
45, 57
               

               
Conread position:
               
196-405
               

               
Cow position:
               
chr11:83357312-83357106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
53, 33
               

               
Conread position:
               
198-395
               

               
Cow position:
               
chr11:35874074-35874257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
40, 57
               

               
Conread position:
               
199-373
               

               
Cow position:
               
chr11:16342327-16342496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
199-401
               

               
Cow position:
               
chr11:33293868-33294074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
199-401
               

               
Cow position:
               
chr11:69119221-69119017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
199-402
               

               
Cow position:
               
chr11:55117397-55117189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
41, 9
               

               
Conread position:
               
199-405
               

               
Cow position:
               
chr11:3769375-3769576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
170, 41
               

               
Conread position:
               
199-405
               

               
Cow position:
               
chr11:55348183-55347976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 55
               

               
Conread position:
               
201-398
               

               
Cow position:
               
chr11:83043449-83043640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 51
               

               
Conread position:
               
201-399
               

               
Cow position:
               
chr11:58600779-58600580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 159
               

               
Conread position:
               
201-401
               

               
Cow position:
               
chr11:62376521-62376719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
201-402
               

               
Cow position:
               
chr11:80820084-80820282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
201-403
               

               
Cow position:
               
chr11:62150971-62151166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
201-403
               

               
Cow position:
               
chr11:65430974-65430780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 39
               

               
Conread position:
               
201-443
               

               
Cow position:
               
chr11:35881825-35881585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 39
               

               
Conread position:
               
202-390
               

               
Cow position:
               
chr11:5226823-5227010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 38
               

               
Conread position:
               
202-393
               

               
Cow position:
               
chr11:30912074-30912266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
202-401
               

               
Cow position:
               
chr11:46473767-46473968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
36, 53
               

               
Conread position:
               
202-401
               

               
Cow position:
               
chr11:84775020-84774835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 27
               

               
Conread position:
               
202-402
               

               
Cow position:
               
chr11:60512701-60512502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
31, 39
               

               
Conread position:
               
202-403
               

               
Cow position:
               
chr11:1849250-1849448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
202-403
               

               
Cow position:
               
chr11:50197522-50197729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
42, 38
               

               
Conread position:
               
202-405
               

               
Cow position:
               
chr11:24146037-24145832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
202-405
               

               
Cow position:
               
chr11:43646497-43646703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
93, 28
               

               
Conread position:
               
202-405
               

               
Cow position:
               
chr11:44575822-44576023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
202-405
               

               
Cow position:
               
chr11:64334771-64334571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
47, 38
               

               
Conread position:
               
203-404
               

               
Cow position:
               
chr11:10620412-10620611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
114, 63
               

               
Conread position:
               
203-405
               

               
Cow position:
               
chr11:11533989-11534188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
204-405
               

               
Cow position:
               
chr11:8525199-8525392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
204-421
               

               
Cow position:
               
chr11:8988317-8988528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
111, 36
               

               
Conread position:
               
206-404
               

               
Cow position:
               
chr11:18630371-18630169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
206-405
               

               
Cow position:
               
chr11:18388952-18389143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
206-405
               

               
Cow position:
               
chr11:31437082-31437285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
208-404
               

               
Cow position:
               
chr11:54134342-54134531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 44
               

               
Conread position:
               
209-397
               

               
Cow position:
               
chr11:12111560-12111746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
209-405
               

               
Cow position:
               
chr11:6620378-6620578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
213-404
               

               
Cow position:
               
chr11:31873473-31873283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
11, 146
               

               
Conread position:
               
213-405
               

               
Cow position:
               
chr11:35252088-35252269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
213-405
               

               
Cow position:
               
chr11:71705496-71705689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 147
               

               
Conread position:
               
214-405
               

               
Cow position:
               
chr11:74746675-74746483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
30, 25
               

               
Conread position:
               
216-389
               

               
Cow position:
               
chr11:7414948-7415116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
216-401
               

               
Cow position:
               
chr11:3303733-3303554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
216-401
               

               
Cow position:
               
chr11:16795252-16795434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
216-401
               

               
Cow position:
               
chr11:22977965-22978139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
31, 24
               

               
Conread position:
               
216-404
               

               
Cow position:
               
chr11:37563363-37563184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
25, 35
               

               
Conread position:
               
216-405
               

               
Cow position:
               
chr11:6639410-6639225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
216-405
               

               
Cow position:
               
chr11:46451513-46451332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 9
               

               
Conread position:
               
217-403
               

               
Cow position:
               
chr11:64087933-64087749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
217-405
               

               
Cow position:
               
chr11:53925663-53925475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
220-405
               

               
Cow position:
               
chr11:36986862-36986675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
222-401
               

               
Cow position:
               
chr11:18525994-18526175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
222-402
               

               
Cow position:
               
chr11:25645970-25646150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
31, 148
               

               
Conread position:
               
222-403
               

               
Cow position:
               
chr11:36309516-36309696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 17
               

               
Conread position:
               
222-404
               

               
Cow position:
               
chr11:63920395-63920573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
222-405
               

               
Cow position:
               
chr11:72314443-72314259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 17
               

               
Conread position:
               
230-399
               

               
Cow position:
               
chr11:75510345-75510513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
230-404
               

               
Cow position:
               
chr11:9234516-9234341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 59
               

               
Conread position:
               
231-405
               

               
Cow position:
               
chr11:78480684-78480508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
84, 21
               

               
Conread position:
               
236-405
               

               
Cow position:
               
chr11:35206638-35206808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
236-405
               

               
Cow position:
               
chr11:38021123-38021293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
237-392
               

               
Cow position:
               
chr11:17036671-17036825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
237-398
               

               
Cow position:
               
chr11:29014276-29014116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 123
               

               
Conread position:
               
237-403
               

               
Cow position:
               
chr11:70619931-70619771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
240-401
               

               
Cow position:
               
chr11:25807880-25808041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
243-405
               

               
Cow position:
               
chr11:75286533-75286694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
244-392
               

               
Cow position:
               
chr11:39034321-39034181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
245-392
               

               
Cow position:
               
chr11:30354940-30354794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
245-396
               

               
Cow position:
               
chr11:18891153-18891003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
245-397
               

               
Cow position:
               
chr11:56751514-56751659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
245-398
               

               
Cow position:
               
chr11:80520842-80520688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
245-405
               

               
Cow position:
               
chr11:2910951-2911107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
246-399
               

               
Cow position:
               
chr11:49074421-49074574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
123, 77
               

               
Conread position:
               
246-401
               

               
Cow position:
               
chr11:49550208-49550360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
246-403
               

               
Cow position:
               
chr11:49057046-49056891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
247-399
               

               
Cow position:
               
chr11:81337101-81337253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
247-402
               

               
Cow position:
               
chr11:18913134-18912980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
247-405
               

               
Cow position:
               
chr11:29608299-29608457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
248-392
               

               
Cow position:
               
chr11:81922753-81922607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
248-396
               

               
Cow position:
               
chr11:32194293-32194445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
248-399
               

               
Cow position:
               
chr11:17083430-17083578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
248-399
               

               
Cow position:
               
chr11:35282992-35282843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
248-402
               

               
Cow position:
               
chr11:40608852-40609004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
248-402
               

               
Cow position:
               
chr11:85271829-85271981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
248-405
               

               
Cow position:
               
chr11:6046701-6046857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
248-405
               

               
Cow position:
               
chr11:18141109-18140955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 115
               

               
Conread position:
               
249-402
               

               
Cow position:
               
chr11:15285748-15285901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-405
               

               
Cow position:
               
chr11:10545859-10545703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
252-403
               

               
Cow position:
               
chr11:32218131-32218284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
252-405
               

               
Cow position:
               
chr11:45277290-45277442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
252-405
               

               
Cow position:
               
chr11:63166296-63166446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
267-405
               

               
Cow position:
               
chr11:19787996-19787859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
268-402
               

               
Cow position:
               
chr11:37547063-37547197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
274-405
               

               
Cow position:
               
chr11:27326329-27326198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
293-404
               

               
Cow position:
               
chr11:33526903-33526791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
7, 66
               

               
Conread position:
               
301-405
               

               
Cow position:
               
chr11:6091831-6091935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
301-405
               

               
Cow position:
               
chr11:27907370-27907266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
303-402
               

               
Cow position:
               
chr11:19890697-19890601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
304-404
               

               
Cow position:
               
chr11:53147726-53147825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
307-404
               

               
Cow position:
               
chr11:47662536-47662439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
310-405
               

               
Cow position:
               
chr11:15373446-15373351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.