Cow genome map

Conread name: Ss1.1-Lym1-jns55_D05.f.5

Conread position: 109-405
Cow position: chr17:42347163-42347448 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 86, 13

Conread position: 127-403
Cow position: chr17:1783559-1783831 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 68, 33

Conread position: 127-405
Cow position: chr17:5330629-5330348 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 184
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 16

Conread position: 127-405
Cow position: chr17:15664722-15664442 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 66, 166

Conread position: 127-405
Cow position: chr17:38615005-38614729 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 69, 33

Conread position: 129-401
Cow position: chr17:29472510-29472252 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 66, 38

Conread position: 130-405
Cow position: chr17:25815644-25815381 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 66, 30

Conread position: 132-392
Cow position: chr17:40331815-40331555 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 179
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 162

Conread position: 132-402
Cow position: chr17:40421711-40421445 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 182
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 32

Conread position: 133-353
Cow position: chr17:12591208-12590988 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 61, 27

Conread position: 133-367
Cow position: chr17:12536426-12536657 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 42

Conread position: 133-372
Cow position: chr17:32950314-32950078 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 63, 7

Conread position: 133-387
Cow position: chr17:38647100-38646859 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 174
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 63, 27

Conread position: 133-396
Cow position: chr17:11281063-11281325 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 63, 156

Conread position: 133-403
Cow position: chr17:23246247-23245986 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 112, 35

Conread position: 133-404
Cow position: chr17:24587663-24587392 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 61, 27

Conread position: 134-384
Cow position: chr17:27429617-27429372 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 60, 34

Conread position: 134-405
Cow position: chr17:32366325-32366059 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 184
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 49, 66

Conread position: 135-405
Cow position: chr17:11664548-11664815 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 59, 41

Conread position: 136-391
Cow position: chr17:13143652-13143903 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 58, 29

Conread position: 143-405
Cow position: chr17:11386549-11386289 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 33, 19

Conread position: 143-405
Cow position: chr17:25901229-25900974 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 53, 17

Conread position: 148-404
Cow position: chr17:21114927-21115174 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 37

Conread position: 150-405
Cow position: chr17:7559639-7559898 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 87

Conread position: 151-398
Cow position: chr17:18884309-18884567 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 45, 230

Conread position: 151-404
Cow position: chr17:26183249-26182996 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 45, 134

Conread position: 152-390
Cow position: chr17:11296665-11296423 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 153

Conread position: 154-402
Cow position: chr17:12059071-12059314 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 42, 102

Conread position: 154-403
Cow position: chr17:21874282-21874541 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 24, 149

Conread position: 155-405
Cow position: chr17:29292344-29292596 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 41, 110

Conread position: 156-403
Cow position: chr17:20993018-20993265 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 40, 134

Conread position: 156-405
Cow position: chr17:4721513-4721260 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 36, 78

Conread position: 156-405
Cow position: chr17:5280629-5280869 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 19

Conread position: 162-371
Cow position: chr17:10458921-10459128 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 82

Conread position: 162-372
Cow position: chr17:26000133-25999922 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 9, 82

Conread position: 162-377
Cow position: chr17:21434712-21434928 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 8

Conread position: 162-395
Cow position: chr17:11156476-11156710 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 92

Conread position: 162-402
Cow position: chr17:923894-923656 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 65

Conread position: 162-402
Cow position: chr17:24077421-24077180 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 128

Conread position: 162-403
Cow position: chr17:27306173-27305936 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 31, 10

Conread position: 162-405
Cow position: chr17:11171808-11171569 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 34, 61

Conread position: 162-405
Cow position: chr17:18860707-18860946 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 34, 110

Conread position: 163-336
Cow position: chr17:14762107-14762277 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 33, 124

Conread position: 163-401
Cow position: chr17:8544323-8544087 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 14, 145

Conread position: 163-402
Cow position: chr17:24550191-24549948 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 32, 212

Conread position: 163-404
Cow position: chr17:24787009-24787247 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 78, 39

Conread position: 163-467
Cow position: chr17:11056356-11056663 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 33, 147

Conread position: 165-403
Cow position: chr17:4606970-4606745 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 77

Conread position: 167-405
Cow position: chr17:20083509-20083739 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 73, 28

Conread position: 169-392
Cow position: chr17:25097471-25097249 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 27, 149

Conread position: 169-396
Cow position: chr17:21738867-21739102 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 27, 0

Conread position: 169-401
Cow position: chr17:22806530-22806757 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 41

Conread position: 169-404
Cow position: chr17:5224409-5224177 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 27, 87

Conread position: 169-404
Cow position: chr17:13989166-13989400 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 63

Conread position: 169-405
Cow position: chr17:9565316-9565082 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 27, 72

Conread position: 169-405
Cow position: chr17:21620727-21620487 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 27, 73

Conread position: 172-353
Cow position: chr17:24149189-24149002 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 172-401
Cow position: chr17:30718414-30718642 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 12, 70

Conread position: 172-404
Cow position: chr17:20848527-20848305 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 26, 97

Conread position: 172-404
Cow position: chr17:36330953-36331192 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 22, 124

Conread position: 172-405
Cow position: chr17:23337010-23337241 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 14, 86

Conread position: 173-387
Cow position: chr17:32278902-32279116 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 20, 7

Conread position: 173-405
Cow position: chr17:19999143-19998908 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 23, 53

Conread position: 174-401
Cow position: chr17:13940316-13940545 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 21, 67

Conread position: 174-402
Cow position: chr17:31481033-31481266 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 21, 215

Conread position: 174-404
Cow position: chr17:5688354-5688574 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 85

Conread position: 174-405
Cow position: chr17:27274567-27274335 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 69

Conread position: 175-343
Cow position: chr17:979153-979318 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 115

Conread position: 175-385
Cow position: chr17:6624259-6624051 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 21, 125

Conread position: 175-400
Cow position: chr17:32419112-32419340 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 0

Conread position: 175-404
Cow position: chr17:5745251-5745469 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 67, 25

Conread position: 175-405
Cow position: chr17:1493148-1493383 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 21, 44

Conread position: 175-405
Cow position: chr17:15333710-15333937 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 19, 102

Conread position: 175-405
Cow position: chr17:22032688-22032910 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 81

Conread position: 176-339
Cow position: chr17:25916899-25916731 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 176-340
Cow position: chr17:7142864-7142702 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 112

Conread position: 176-372
Cow position: chr17:11278029-11278226 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 121

Conread position: 176-382
Cow position: chr17:44232713-44232924 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 176-388
Cow position: chr17:20932331-20932126 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 126

Conread position: 176-389
Cow position: chr17:3471422-3471210 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 20, 114

Conread position: 176-389
Cow position: chr17:31231113-31231325 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 22, 41

Conread position: 176-390
Cow position: chr17:40741650-40741435 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 100

Conread position: 176-392
Cow position: chr17:21495378-21495163 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 106

Conread position: 176-392
Cow position: chr17:21628481-21628269 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 110

Conread position: 176-392
Cow position: chr17:24580295-24580513 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 20, 80

Conread position: 176-393
Cow position: chr17:41892064-41892288 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 67

Conread position: 176-399
Cow position: chr17:26230952-26230719 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 203

Conread position: 176-400
Cow position: chr17:20780512-20780290 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 20, 82

Conread position: 176-401
Cow position: chr17:11101799-11102017 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 20, 80

Conread position: 176-401
Cow position: chr17:13922480-13922250 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 18, 82

Conread position: 176-401
Cow position: chr17:41290021-41290240 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 65

Conread position: 176-402
Cow position: chr17:9117648-9117419 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 20, 80

Conread position: 176-402
Cow position: chr17:28540031-28539812 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 17, 114

Conread position: 176-403
Cow position: chr17:21363407-21363183 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 65, 10

Conread position: 176-403
Cow position: chr17:27048159-27047938 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 20, 52

Conread position: 176-404
Cow position: chr17:5246893-5246672 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 40

Conread position: 176-404
Cow position: chr17:5895909-5896136 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 20, 50

Conread position: 176-404
Cow position: chr17:9778249-9778025 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 20, 115

Conread position: 176-404
Cow position: chr17:21312809-21313027 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 14, 67

Conread position: 176-404
Cow position: chr17:24883566-24883790 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 67

Conread position: 176-404
Cow position: chr17:34948640-34948414 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 104

Conread position: 176-405
Cow position: chr17:3306868-3306641 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 20, 67

Conread position: 176-405
Cow position: chr17:7132449-7132682 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 20, 0

Conread position: 176-405
Cow position: chr17:7698053-7697829 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 18, 60

Conread position: 176-405
Cow position: chr17:9746516-9746294 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 82

Conread position: 176-405
Cow position: chr17:10649843-10649622 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 65, 27

Conread position: 176-405
Cow position: chr17:14025911-14026142 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 145

Conread position: 176-405
Cow position: chr17:18720448-18720675 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 20, 117

Conread position: 176-405
Cow position: chr17:20126614-20126394 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 20, 67

Conread position: 176-405
Cow position: chr17:20839559-20839785 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 114

Conread position: 176-405
Cow position: chr17:21680766-21680541 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 20, 57

Conread position: 176-405
Cow position: chr17:21959685-21959906 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 17, 114

Conread position: 176-405
Cow position: chr17:21973132-21973358 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 80

Conread position: 176-405
Cow position: chr17:30539251-30539476 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 67

Conread position: 176-405
Cow position: chr17:30665273-30665047 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 20, 111

Conread position: 176-405
Cow position: chr17:32027454-32027689 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 19, 0

Conread position: 176-405
Cow position: chr17:32651621-32651389 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 20, 120

Conread position: 176-405
Cow position: chr17:35185042-35184807 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 176-405
Cow position: chr17:40771838-40771601 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 20, 0

Conread position: 176-423
Cow position: chr17:14848542-14848768 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 242, 24

Conread position: 177-372
Cow position: chr17:35311427-35311227 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 80

Conread position: 177-373
Cow position: chr17:21697737-21697537 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 177-386
Cow position: chr17:34207818-34208028 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 79

Conread position: 177-399
Cow position: chr17:22564182-22563966 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 19, 113

Conread position: 177-402
Cow position: chr17:12289417-12289641 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 65

Conread position: 177-405
Cow position: chr17:1295569-1295798 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 180
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 19, 114

Conread position: 177-405
Cow position: chr17:5041681-5041903 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 59

Conread position: 177-405
Cow position: chr17:15102892-15103115 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 20, 39

Conread position: 177-405
Cow position: chr17:15684513-15684278 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 66

Conread position: 177-405
Cow position: chr17:21031783-21031561 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 19, 113

Conread position: 177-406
Cow position: chr17:1526354-1526581 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 19, 42

Conread position: 178-366
Cow position: chr17:908742-908558 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 48

Conread position: 178-366
Cow position: chr17:4436233-4436419 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 78

Conread position: 178-372
Cow position: chr17:21207134-21207329 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 31

Conread position: 178-376
Cow position: chr17:4601547-4601745 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 20, 76

Conread position: 178-384
Cow position: chr17:1035598-1035810 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 18, 100

Conread position: 178-397
Cow position: chr17:25128349-25128568 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 18, 78

Conread position: 178-401
Cow position: chr17:21017796-21017571 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 77

Conread position: 178-401
Cow position: chr17:39771395-39771173 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 57

Conread position: 178-402
Cow position: chr17:1410240-1410465 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 18, 78

Conread position: 178-402
Cow position: chr17:12216073-12216301 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 18, 79

Conread position: 178-403
Cow position: chr17:21003829-21004056 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 11, 116

Conread position: 178-403
Cow position: chr17:24973951-24973725 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 16, 78

Conread position: 178-404
Cow position: chr17:8690442-8690666 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 18, 112

Conread position: 178-404
Cow position: chr17:25541821-25542038 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 41

Conread position: 178-404
Cow position: chr17:31231931-31232156 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 92

Conread position: 178-404
Cow position: chr17:32993625-32993839 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 38

Conread position: 178-404
Cow position: chr17:38200761-38200992 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 18, 0

Conread position: 178-405
Cow position: chr17:5255372-5255603 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 18, 64

Conread position: 178-405
Cow position: chr17:5423073-5423298 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 19, 63

Conread position: 178-405
Cow position: chr17:9853986-9853759 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 43

Conread position: 178-405
Cow position: chr17:12929538-12929770 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 62

Conread position: 178-405
Cow position: chr17:25189287-25189053 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 18, 116

Conread position: 178-405
Cow position: chr17:25608502-25608733 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 64

Conread position: 178-406
Cow position: chr17:4612077-4612307 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 18, 37

Conread position: 178-406
Cow position: chr17:8079316-8079089 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 18, 124

Conread position: 178-439
Cow position: chr17:33122094-33121827 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 78

Conread position: 179-387
Cow position: chr17:10446917-10446707 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 16, 76

Conread position: 179-396
Cow position: chr17:5380969-5380748 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 17, 162

Conread position: 179-396
Cow position: chr17:20870102-20870311 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 46

Conread position: 179-400
Cow position: chr17:25590236-25590458 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 103

Conread position: 179-403
Cow position: chr17:1061061-1061287 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 15, 149

Conread position: 179-403
Cow position: chr17:23101210-23101436 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 64

Conread position: 179-405
Cow position: chr17:9697700-9697928 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 77

Conread position: 179-405
Cow position: chr17:11618584-11618353 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 17, 91

Conread position: 179-405
Cow position: chr17:14033642-14033874 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 17, 64

Conread position: 179-405
Cow position: chr17:16371254-16371025 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 14, 64

Conread position: 179-407
Cow position: chr17:37414897-37415129 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 44

Conread position: 180-402
Cow position: chr17:7040949-7041169 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 16, 51

Conread position: 180-402
Cow position: chr17:43717321-43717530 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 61, 24

Conread position: 180-405
Cow position: chr17:10528737-10528968 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 16, 0

Conread position: 180-405
Cow position: chr17:13409360-13409581 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 18

Conread position: 182-404
Cow position: chr17:6566461-6566247 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 33

Conread position: 183-376
Cow position: chr17:1256509-1256702 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 35

Conread position: 183-376
Cow position: chr17:24490522-24490323 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 12, 60

Conread position: 183-392
Cow position: chr17:11381723-11381934 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 12, 33

Conread position: 183-398
Cow position: chr17:3782038-3781823 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 72

Conread position: 183-402
Cow position: chr17:37163526-37163751 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 12, 0

Conread position: 183-404
Cow position: chr17:11397660-11397444 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 58, 19

Conread position: 183-404
Cow position: chr17:20889369-20889149 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 53

Conread position: 183-405
Cow position: chr17:11035918-11035694 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 13, 30

Conread position: 183-405
Cow position: chr17:17951236-17951016 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 12, 74

Conread position: 183-405
Cow position: chr17:23063710-23063484 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 12, 110

Conread position: 183-405
Cow position: chr17:30529547-30529763 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 22, 58

Conread position: 183-405
Cow position: chr17:34316714-34316935 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 57

Conread position: 184-404
Cow position: chr17:242631-242410 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 12, 107

Conread position: 185-403
Cow position: chr17:6263905-6263683 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 9, 55

Conread position: 185-405
Cow position: chr17:3511392-3511616 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 55

Conread position: 185-405
Cow position: chr17:8223749-8223527 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 151
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 55

Conread position: 185-405
Cow position: chr17:16854061-16854286 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 151
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 55

Conread position: 185-405
Cow position: chr17:29277224-29277005 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 55

Conread position: 185-405
Cow position: chr17:29951537-29951316 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 53

Conread position: 185-405
Cow position: chr17:43008715-43008491 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 55

Conread position: 186-403
Cow position: chr17:41029946-41029727 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 14, 57

Conread position: 186-405
Cow position: chr17:20032923-20033143 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 64, 53

Conread position: 193-376
Cow position: chr17:26515752-26515934 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 128
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 60, 46

Conread position: 193-385
Cow position: chr17:33052841-33052656 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 48, 94

Conread position: 193-388
Cow position: chr17:22781673-22781482 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 47

Conread position: 193-390
Cow position: chr17:21710486-21710293 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 60, 9

Conread position: 193-395
Cow position: chr17:966757-966955 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 110

Conread position: 193-395
Cow position: chr17:24553988-24553787 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 19

Conread position: 193-396
Cow position: chr17:20835578-20835375 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 46, 62

Conread position: 193-396
Cow position: chr17:29040484-29040684 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 176, 93

Conread position: 193-397
Cow position: chr17:10220457-10220262 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 193-402
Cow position: chr17:27142741-27142530 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 48, 60

Conread position: 193-403
Cow position: chr17:6156022-6155816 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 48, 15

Conread position: 193-403
Cow position: chr17:34595922-34595719 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 35

Conread position: 193-404
Cow position: chr17:1020580-1020793 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 46

Conread position: 193-404
Cow position: chr17:12219955-12220164 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 47

Conread position: 193-404
Cow position: chr17:25168300-25168087 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 54, 47

Conread position: 193-404
Cow position: chr17:32554043-32554249 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 37, 0

Conread position: 193-404
Cow position: chr17:33402955-33403166 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 75

Conread position: 193-405
Cow position: chr17:3498682-3498891 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 48, 84

Conread position: 193-405
Cow position: chr17:5000597-5000801 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 193-405
Cow position: chr17:6858406-6858619 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 46

Conread position: 193-405
Cow position: chr17:9079216-9079413 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 19

Conread position: 193-405
Cow position: chr17:17222326-17222117 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 48, 112

Conread position: 193-405
Cow position: chr17:18490519-18490306 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 102

Conread position: 193-405
Cow position: chr17:19891602-19891388 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 36, 13

Conread position: 193-405
Cow position: chr17:20800798-20800589 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 78

Conread position: 193-405
Cow position: chr17:21335713-21335925 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 51, 47

Conread position: 193-405
Cow position: chr17:26764999-26764787 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 62

Conread position: 193-405
Cow position: chr17:27679255-27679471 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 32, 0

Conread position: 193-405
Cow position: chr17:27819284-27819075 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 79, 47

Conread position: 193-405
Cow position: chr17:38833024-38832815 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 52, 46

Conread position: 195-403
Cow position: chr17:18109106-18109311 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 44, 92

Conread position: 195-404
Cow position: chr17:38116392-38116186 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 196-367
Cow position: chr17:24773658-24773494 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 196-377
Cow position: chr17:21412267-21412446 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 196-405
Cow position: chr17:20022538-20022744 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 57

Conread position: 196-405
Cow position: chr17:24877121-24876911 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 196-405
Cow position: chr17:40642107-40642317 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 138
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 197-404
Cow position: chr17:3387265-3387068 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 95

Conread position: 201-390
Cow position: chr17:1275498-1275307 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 201-392
Cow position: chr17:25078028-25078207 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 17, 53

Conread position: 201-395
Cow position: chr17:3182611-3182801 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 52

Conread position: 201-396
Cow position: chr17:5767888-5767696 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 52

Conread position: 201-402
Cow position: chr17:3683685-3683881 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 24

Conread position: 201-403
Cow position: chr17:9950926-9950734 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 16

Conread position: 201-404
Cow position: chr17:24761254-24761449 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 40, 52

Conread position: 201-405
Cow position: chr17:6423734-6423534 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 40, 54

Conread position: 201-405
Cow position: chr17:26627665-26627870 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 138
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 38, 175

Conread position: 201-405
Cow position: chr17:37579003-37579206 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 38

Conread position: 202-384
Cow position: chr17:21243813-21243992 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 14

Conread position: 202-392
Cow position: chr17:1327998-1328184 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 202-395
Cow position: chr17:17406112-17405921 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 23, 53

Conread position: 202-403
Cow position: chr17:3258468-3258272 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 18

Conread position: 202-403
Cow position: chr17:9494374-9494576 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 134
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 202-403
Cow position: chr17:30204629-30204430 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 20, 39

Conread position: 202-404
Cow position: chr17:1358828-1359023 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 72, 0

Conread position: 202-404
Cow position: chr17:36817914-36817716 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 79

Conread position: 202-405
Cow position: chr17:1482326-1482122 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 74

Conread position: 202-405
Cow position: chr17:24503825-24503622 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 137
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 51, 18

Conread position: 202-405
Cow position: chr17:26514692-26514488 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 42, 37

Conread position: 202-405
Cow position: chr17:29364780-29364576 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 136
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 202-405
Cow position: chr17:36285289-36285085 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 136
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 202-409
Cow position: chr17:11172644-11172847 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 32

Conread position: 203-401
Cow position: chr17:25796364-25796563 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 36

Conread position: 203-402
Cow position: chr17:7760494-7760687 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 204-392
Cow position: chr17:18592414-18592225 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 49

Conread position: 204-405
Cow position: chr17:33288685-33288881 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 205-404
Cow position: chr17:14088353-14088553 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 205-405
Cow position: chr17:34079132-34079325 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 67

Conread position: 208-405
Cow position: chr17:26818483-26818679 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 30, 45

Conread position: 213-403
Cow position: chr17:16117461-16117654 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 28, 0

Conread position: 213-405
Cow position: chr17:40312688-40312498 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 165

Conread position: 215-405
Cow position: chr17:21039238-21039051 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 38

Conread position: 215-410
Cow position: chr17:12759676-12759870 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 24

Conread position: 216-396
Cow position: chr17:14265595-14265777 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 216-402
Cow position: chr17:37482114-37482312 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 216-405
Cow position: chr17:27162613-27162425 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 73

Conread position: 217-405
Cow position: chr17:26771399-26771581 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 22

Conread position: 218-401
Cow position: chr17:12054678-12054497 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 71

Conread position: 218-404
Cow position: chr17:30999729-30999548 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 21

Conread position: 218-436
Cow position: chr17:36533613-36533403 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 22

Conread position: 226-400
Cow position: chr17:25875361-25875191 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 56

Conread position: 229-385
Cow position: chr17:13124787-13124943 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 23

Conread position: 230-379
Cow position: chr17:26224466-26224317 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 139

Conread position: 230-404
Cow position: chr17:6936718-6936890 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 11, 58

Conread position: 235-405
Cow position: chr17:29715247-29715413 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 236-405
Cow position: chr17:20090682-20090848 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 62

Conread position: 237-397
Cow position: chr17:12325811-12325965 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 237-403
Cow position: chr17:1026216-1026054 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 237-404
Cow position: chr17:8644976-8644811 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 237-405
Cow position: chr17:7810798-7810964 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 70, 15

Conread position: 237-405
Cow position: chr17:32399579-32399749 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 120
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 240-405
Cow position: chr17:40406241-40406077 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 242-405
Cow position: chr17:22057241-22057400 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 243-405
Cow position: chr17:5898593-5898751 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 44

Conread position: 245-403
Cow position: chr17:3095758-3095600 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 246-401
Cow position: chr17:20055597-20055447 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 128, 51

Conread position: 246-404
Cow position: chr17:8214855-8214695 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 125, 77

Conread position: 246-405
Cow position: chr17:7423513-7423668 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 246-405
Cow position: chr17:16895369-16895521 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 246-405
Cow position: chr17:23879894-23880055 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 246-406
Cow position: chr17:26084962-26084807 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 248-404
Cow position: chr17:23680909-23680758 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 32

Conread position: 248-409
Cow position: chr17:2662339-2662179 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 156, 0

Conread position: 249-405
Cow position: chr17:3153843-3153999 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 249-405
Cow position: chr17:39012647-39012491 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 110
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 251-402
Cow position: chr17:23517245-23517391 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 251-405
Cow position: chr17:15376245-15376096 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 269-405
Cow position: chr17:20858131-20858267 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 101
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 280-397
Cow position: chr17:32977077-32977193 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 287-405
Cow position: chr17:2729906-2730025 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 301-401
Cow position: chr17:38829960-38829860 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 301-402
Cow position: chr17:2275152-2275050 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 302-405
Cow position: chr17:40802688-40802585 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 302-406
Cow position: chr17:27770081-27770185 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 304-403
Cow position: chr17:17240079-17240177 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 0

Show alignments to all cow chromosomes.