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Cow genome map

           
Conread name:
           
Ss1.1-Lym1-jns55_D05.f.5
        

               
Conread position:
               
117-367
               

               
Cow position:
               
chr27:10992296-10992540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
79, 8
               

               
Conread position:
               
121-396
               

               
Cow position:
               
chr27:27641061-27640777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
75, 257
               

               
Conread position:
               
127-399
               

               
Cow position:
               
chr27:12516145-12516417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 39
               

               
Conread position:
               
127-405
               

               
Cow position:
               
chr27:10979815-10980088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
128-397
               

               
Cow position:
               
chr27:20553677-20553933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
116, 41
               

               
Conread position:
               
130-375
               

               
Cow position:
               
chr27:30670695-30670932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 39
               

               
Conread position:
               
130-405
               

               
Cow position:
               
chr27:1353538-1353807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
65, 42
               

               
Conread position:
               
131-403
               

               
Cow position:
               
chr27:4672971-4673243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
7, 41
               

               
Conread position:
               
133-392
               

               
Cow position:
               
chr27:16871958-16871708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 42
               

               
Conread position:
               
133-392
               

               
Cow position:
               
chr27:30407079-30406820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
133-396
               

               
Cow position:
               
chr27:30550953-30551211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 37
               

               
Conread position:
               
133-401
               

               
Cow position:
               
chr27:31373025-31372760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 110
               

               
Conread position:
               
133-402
               

               
Cow position:
               
chr27:2592501-2592762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
63, 149
               

               
Conread position:
               
133-405
               

               
Cow position:
               
chr27:22171255-22171523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
24, 37
               

               
Conread position:
               
133-405
               

               
Cow position:
               
chr27:23483182-23483447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
63, 42
               

               
Conread position:
               
133-405
               

               
Cow position:
               
chr27:25379948-25380215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
134-391
               

               
Cow position:
               
chr27:20641376-20641136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 33
               

               
Conread position:
               
135-402
               

               
Cow position:
               
chr27:20795749-20796005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
150-405
               

               
Cow position:
               
chr27:26643654-26643897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
29, 52
               

               
Conread position:
               
151-405
               

               
Cow position:
               
chr27:27684149-27683890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
45, 92
               

               
Conread position:
               
152-403
               

               
Cow position:
               
chr27:1183905-1183654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
44, 77
               

               
Conread position:
               
154-405
               

               
Cow position:
               
chr27:28931818-28931563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
42, 15
               

               
Conread position:
               
155-389
               

               
Cow position:
               
chr27:23128431-23128663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
155-392
               

               
Cow position:
               
chr27:12246635-12246871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
83, 99
               

               
Conread position:
               
156-392
               

               
Cow position:
               
chr27:30605658-30605894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
6, 64
               

               
Conread position:
               
156-401
               

               
Cow position:
               
chr27:27040580-27040829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
157-401
               

               
Cow position:
               
chr27:27038860-27038624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
157-403
               

               
Cow position:
               
chr27:24014760-24014519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 54
               

               
Conread position:
               
157-405
               

               
Cow position:
               
chr27:536443-536681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
93, 15
               

               
Conread position:
               
159-402
               

               
Cow position:
               
chr27:28038363-28038116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
159-405
               

               
Cow position:
               
chr27:24227815-24227569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
82, 46
               

               
Conread position:
               
161-405
               

               
Cow position:
               
chr27:11536123-11535873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 76
               

               
Conread position:
               
162-390
               

               
Cow position:
               
chr27:13197902-13198125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
162-400
               

               
Cow position:
               
chr27:18593251-18593488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
162-401
               

               
Cow position:
               
chr27:8292022-8291790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
162-401
               

               
Cow position:
               
chr27:22220537-22220774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
162-404
               

               
Cow position:
               
chr27:12596747-12596980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
162-405
               

               
Cow position:
               
chr27:6550439-6550675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
34, 123
               

               
Conread position:
               
162-405
               

               
Cow position:
               
chr27:11255502-11255737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
162-405
               

               
Cow position:
               
chr27:23472238-23472480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
34, 50
               

               
Conread position:
               
163-373
               

               
Cow position:
               
chr27:13251991-13252202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
31, 98
               

               
Conread position:
               
163-404
               

               
Cow position:
               
chr27:19577656-19577897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
163-405
               

               
Cow position:
               
chr27:4386079-4385841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
13, 100
               

               
Conread position:
               
164-404
               

               
Cow position:
               
chr27:10307318-10307072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
164-405
               

               
Cow position:
               
chr27:26413270-26413031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
20, 79
               

               
Conread position:
               
168-392
               

               
Cow position:
               
chr27:30359396-30359606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
169-346
               

               
Cow position:
               
chr27:22268490-22268670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
169-388
               

               
Cow position:
               
chr27:25277130-25277342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
169-389
               

               
Cow position:
               
chr27:29283420-29283203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 137
               

               
Conread position:
               
169-391
               

               
Cow position:
               
chr27:20283631-20283841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
169-398
               

               
Cow position:
               
chr27:8430449-8430222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 64
               

               
Conread position:
               
169-405
               

               
Cow position:
               
chr27:17472798-17473037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
27, 124
               

               
Conread position:
               
169-405
               

               
Cow position:
               
chr27:21351032-21350791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
169-405
               

               
Cow position:
               
chr27:24559456-24559223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 75
               

               
Conread position:
               
169-405
               

               
Cow position:
               
chr27:28190225-28189993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
27, 46
               

               
Conread position:
               
169-405
               

               
Cow position:
               
chr27:30362235-30362467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
171-410
               

               
Cow position:
               
chr27:15319442-15319681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 44
               

               
Conread position:
               
172-387
               

               
Cow position:
               
chr27:26807571-26807357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
172-400
               

               
Cow position:
               
chr27:2957397-2957627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
75, 35
               

               
Conread position:
               
175-404
               

               
Cow position:
               
chr27:6523033-6523269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
18, 111
               

               
Conread position:
               
175-405
               

               
Cow position:
               
chr27:1768625-1768411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 66
               

               
Conread position:
               
175-405
               

               
Cow position:
               
chr27:6058496-6058726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
66, 26
               

               
Conread position:
               
175-405
               

               
Cow position:
               
chr27:23554335-23554099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 215
               

               
Conread position:
               
175-405
               

               
Cow position:
               
chr27:25809526-25809299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
31, 115
               

               
Conread position:
               
175-405
               

               
Cow position:
               
chr27:31147675-31147449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
16, 41
               

               
Conread position:
               
176-346
               

               
Cow position:
               
chr27:15643167-15643341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
176-346
               

               
Cow position:
               
chr27:18434474-18434305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
176-353
               

               
Cow position:
               
chr27:9169649-9169472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 114
               

               
Conread position:
               
176-371
               

               
Cow position:
               
chr27:30988792-30988989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 102
               

               
Conread position:
               
176-372
               

               
Cow position:
               
chr27:16705248-16705438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
176-375
               

               
Cow position:
               
chr27:19589471-19589673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
176-379
               

               
Cow position:
               
chr27:30915003-30915200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
176-383
               

               
Cow position:
               
chr27:27003278-27003079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
176-386
               

               
Cow position:
               
chr27:20354580-20354785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
176-387
               

               
Cow position:
               
chr27:1884045-1884244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
66, 14
               

               
Conread position:
               
176-387
               

               
Cow position:
               
chr27:18215048-18215262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
176-392
               

               
Cow position:
               
chr27:24999744-24999523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
176-395
               

               
Cow position:
               
chr27:23455159-23454932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 198
               

               
Conread position:
               
176-396
               

               
Cow position:
               
chr27:18558355-18558579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
20, 93
               

               
Conread position:
               
176-398
               

               
Cow position:
               
chr27:25790799-25791021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 126
               

               
Conread position:
               
176-400
               

               
Cow position:
               
chr27:27259607-27259827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
176-402
               

               
Cow position:
               
chr27:22418771-22418545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
176-402
               

               
Cow position:
               
chr27:23882381-23882153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
15, 165
               

               
Conread position:
               
176-404
               

               
Cow position:
               
chr27:1058683-1058459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
63, 26
               

               
Conread position:
               
176-404
               

               
Cow position:
               
chr27:30527175-30527389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
176-404
               

               
Cow position:
               
chr27:30765032-30765255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr27:6541625-6541849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 79
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr27:7958845-7958611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 53
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr27:8942687-8942459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 94
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr27:9090807-9090579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr27:15867393-15867611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 114
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr27:24331717-24331950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 109
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr27:27843999-27843768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
20, 79
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr27:28518291-28518509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr27:28921901-28921672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
20, 72
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr27:30177580-30177350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr27:30868744-30868516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
176-407
               

               
Cow position:
               
chr27:22454782-22454553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
177-401
               

               
Cow position:
               
chr27:13875728-13875948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
19, 66
               

               
Conread position:
               
177-403
               

               
Cow position:
               
chr27:27020107-27019878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 114
               

               
Conread position:
               
177-405
               

               
Cow position:
               
chr27:14902655-14902425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
19, 93
               

               
Conread position:
               
177-405
               

               
Cow position:
               
chr27:26398261-26398035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
178-366
               

               
Cow position:
               
chr27:22547410-22547219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
178-380
               

               
Cow position:
               
chr27:21569845-21569644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
178-384
               

               
Cow position:
               
chr27:19685713-19685511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
178-385
               

               
Cow position:
               
chr27:29250876-29251084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
178-392
               

               
Cow position:
               
chr27:17397453-17397238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
18, 194
               

               
Conread position:
               
178-399
               

               
Cow position:
               
chr27:21669121-21668907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
66, 19
               

               
Conread position:
               
178-401
               

               
Cow position:
               
chr27:12429402-12429628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
178-403
               

               
Cow position:
               
chr27:26224275-26224047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr27:8629875-8629650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr27:13638996-13638768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr27:15859089-15858867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 62
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr27:21138820-21139049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr27:22035377-22035149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
25, 76
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr27:24446157-24445932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 46
               

               
Conread position:
               
179-375
               

               
Cow position:
               
chr27:20591980-20592178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
17, 125
               

               
Conread position:
               
179-397
               

               
Cow position:
               
chr27:2683145-2682927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 63
               

               
Conread position:
               
179-401
               

               
Cow position:
               
chr27:11081193-11081416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 113
               

               
Conread position:
               
179-401
               

               
Cow position:
               
chr27:15866215-15866441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 118
               

               
Conread position:
               
179-404
               

               
Cow position:
               
chr27:25676225-25676456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
17, 63
               

               
Conread position:
               
179-404
               

               
Cow position:
               
chr27:30374574-30374347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
179-405
               

               
Cow position:
               
chr27:12231911-12231686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
17, 76
               

               
Conread position:
               
179-405
               

               
Cow position:
               
chr27:18543993-18544222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 107
               

               
Conread position:
               
179-405
               

               
Cow position:
               
chr27:23070360-23070136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
15, 64
               

               
Conread position:
               
180-405
               

               
Cow position:
               
chr27:15271911-15272130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
180-405
               

               
Cow position:
               
chr27:28276280-28276497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
181-400
               

               
Cow position:
               
chr27:1903060-1903283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
14, 74
               

               
Conread position:
               
181-405
               

               
Cow position:
               
chr27:19486809-19487037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
183-392
               

               
Cow position:
               
chr27:22771754-22771969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
12, 92
               

               
Conread position:
               
183-395
               

               
Cow position:
               
chr27:21408558-21408338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
183-399
               

               
Cow position:
               
chr27:19717927-19718138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
183-401
               

               
Cow position:
               
chr27:26299839-26300059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
183-404
               

               
Cow position:
               
chr27:6500061-6500288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
183-405
               

               
Cow position:
               
chr27:4390252-4390030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
183-405
               

               
Cow position:
               
chr27:11723903-11723680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
183-405
               

               
Cow position:
               
chr27:11815755-11815535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 72
               

               
Conread position:
               
184-403
               

               
Cow position:
               
chr27:22179788-22179575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
13, 91
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr27:2390295-2390519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr27:4881608-4881832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr27:14129506-14129727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr27:15032724-15032948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 54
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr27:15644457-15644233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr27:19522538-19522762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr27:21393495-21393280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
186-400
               

               
Cow position:
               
chr27:30354333-30354126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
186-404
               

               
Cow position:
               
chr27:26380169-26379956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
188-405
               

               
Cow position:
               
chr27:27449417-27449210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
191-403
               

               
Cow position:
               
chr27:2298422-2298634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
192-397
               

               
Cow position:
               
chr27:21453061-21452854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
192-404
               

               
Cow position:
               
chr27:19543893-19543686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 108
               

               
Conread position:
               
192-405
               

               
Cow position:
               
chr27:19388029-19388241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 61
               

               
Conread position:
               
193-378
               

               
Cow position:
               
chr27:30844058-30843881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
193-392
               

               
Cow position:
               
chr27:13317943-13317743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
48, 76
               

               
Conread position:
               
193-392
               

               
Cow position:
               
chr27:28164390-28164200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
193-392
               

               
Cow position:
               
chr27:30582755-30582949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
48, 78
               

               
Conread position:
               
193-395
               

               
Cow position:
               
chr27:20067960-20067765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
193-397
               

               
Cow position:
               
chr27:23632612-23632816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 31
               

               
Conread position:
               
193-398
               

               
Cow position:
               
chr27:706967-707164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
193-400
               

               
Cow position:
               
chr27:29399831-29400036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
46, 88
               

               
Conread position:
               
193-402
               

               
Cow position:
               
chr27:4812864-4812656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 60
               

               
Conread position:
               
193-403
               

               
Cow position:
               
chr27:28018349-28018559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
193-404
               

               
Cow position:
               
chr27:29019736-29019523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr27:651946-651733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr27:815382-815589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr27:2930583-2930372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
48, 100
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr27:6454227-6454437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
33, 48
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr27:7935142-7934939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 47
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr27:11412735-11412940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
62, 95
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr27:11422815-11422604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
190, 49
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr27:13410158-13409944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr27:18507658-18507856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr27:22498573-22498779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 47
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr27:24321202-24321412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
51, 47
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr27:25411503-25411295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 62
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr27:25783620-25783826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 60
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr27:26428117-26427904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr27:26509145-26508937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
51, 47
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr27:27141616-27141816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr27:27389002-27388804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
176, 35
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr27:28907079-28907292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
51, 46
               

               
Conread position:
               
193-406
               

               
Cow position:
               
chr27:16620004-16620216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
45, 60
               

               
Conread position:
               
196-380
               

               
Cow position:
               
chr27:18031044-18030860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
45, 164
               

               
Conread position:
               
196-401
               

               
Cow position:
               
chr27:26436862-26436654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
196-405
               

               
Cow position:
               
chr27:19423217-19423428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 41
               

               
Conread position:
               
199-405
               

               
Cow position:
               
chr27:22426810-22426606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
42, 103
               

               
Conread position:
               
200-394
               

               
Cow position:
               
chr27:16284492-16284685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
49, 40
               

               
Conread position:
               
201-396
               

               
Cow position:
               
chr27:30890311-30890502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
201-403
               

               
Cow position:
               
chr27:20828684-20828485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
100, 19
               

               
Conread position:
               
201-404
               

               
Cow position:
               
chr27:27632582-27632386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
201-405
               

               
Cow position:
               
chr27:6073944-6074140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 53
               

               
Conread position:
               
201-405
               

               
Cow position:
               
chr27:29798965-29799168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 9
               

               
Conread position:
               
201-405
               

               
Cow position:
               
chr27:29831666-29831464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
202-384
               

               
Cow position:
               
chr27:27055599-27055781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
202-390
               

               
Cow position:
               
chr27:15668745-15668558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
202-399
               

               
Cow position:
               
chr27:16513859-16513664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
34, 52
               

               
Conread position:
               
202-400
               

               
Cow position:
               
chr27:29038914-29038721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
202-404
               

               
Cow position:
               
chr27:8048717-8048516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
202-405
               

               
Cow position:
               
chr27:16041755-16041551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
202-405
               

               
Cow position:
               
chr27:21419044-21418842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 87
               

               
Conread position:
               
202-405
               

               
Cow position:
               
chr27:26441036-26440834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 52
               

               
Conread position:
               
202-405
               

               
Cow position:
               
chr27:28206817-28207022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
203-371
               

               
Cow position:
               
chr27:30989819-30989652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
203-405
               

               
Cow position:
               
chr27:2012078-2011879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
204-401
               

               
Cow position:
               
chr27:14670357-14670162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 36
               

               
Conread position:
               
205-403
               

               
Cow position:
               
chr27:15454239-15454435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 34
               

               
Conread position:
               
206-402
               

               
Cow position:
               
chr27:299354-299162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
206-403
               

               
Cow position:
               
chr27:30792909-30792715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
206-405
               

               
Cow position:
               
chr27:27521982-27521780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
207-405
               

               
Cow position:
               
chr27:26865090-26864895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
32, 46
               

               
Conread position:
               
209-405
               

               
Cow position:
               
chr27:18922482-18922674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
209-420
               

               
Cow position:
               
chr27:16786854-16787067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
216-401
               

               
Cow position:
               
chr27:6674276-6674456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 7
               

               
Conread position:
               
216-405
               

               
Cow position:
               
chr27:22549746-22549558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
28, 23
               

               
Conread position:
               
217-402
               

               
Cow position:
               
chr27:26625165-26625348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 59
               

               
Conread position:
               
217-403
               

               
Cow position:
               
chr27:4983566-4983379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
217-403
               

               
Cow position:
               
chr27:16960237-16960419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
217-404
               

               
Cow position:
               
chr27:31217128-31216940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
217-405
               

               
Cow position:
               
chr27:2332632-2332443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
218-405
               

               
Cow position:
               
chr27:23124316-23124129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
26, 21
               

               
Conread position:
               
218-405
               

               
Cow position:
               
chr27:30389178-30388992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
220-405
               

               
Cow position:
               
chr27:22440179-22440366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
221-392
               

               
Cow position:
               
chr27:17926588-17926426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 61
               

               
Conread position:
               
222-405
               

               
Cow position:
               
chr27:5882472-5882288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
222-405
               

               
Cow position:
               
chr27:14530804-14530620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 76
               

               
Conread position:
               
222-405
               

               
Cow position:
               
chr27:22655337-22655153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
223-405
               

               
Cow position:
               
chr27:10384561-10384378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
228-392
               

               
Cow position:
               
chr27:26406992-26406832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
230-392
               

               
Cow position:
               
chr27:20543993-20544161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
49, 10
               

               
Conread position:
               
230-410
               

               
Cow position:
               
chr27:4835558-4835375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
235-440
               

               
Cow position:
               
chr27:490947-491143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
236-405
               

               
Cow position:
               
chr27:24241002-24241172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
237-402
               

               
Cow position:
               
chr27:264308-264472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
12, 107
               

               
Conread position:
               
245-401
               

               
Cow position:
               
chr27:16099957-16099799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
246-405
               

               
Cow position:
               
chr27:22609070-22608912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
247-405
               

               
Cow position:
               
chr27:30185359-30185517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
150, 52
               

               
Conread position:
               
249-405
               

               
Cow position:
               
chr27:9977900-9978049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
260-405
               

               
Cow position:
               
chr27:27455376-27455233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
278-405
               

               
Cow position:
               
chr27:23595369-23595497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 7
               

               
Conread position:
               
284-405
               

               
Cow position:
               
chr27:22293609-22293488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
302-404
               

               
Cow position:
               
chr27:23502585-23502687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
302-405
               

               
Cow position:
               
chr27:15926893-15926996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
302-405
               

               
Cow position:
               
chr27:16331461-16331564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.