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Cow genome map

           
Conread name:
           
Ss1.1-Lym1-jns55_D05.f.5
        

               
Conread position:
               
110-405
               

               
Cow position:
               
chr29:28273370-28273657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
87, 17
               

               
Conread position:
               
111-386
               

               
Cow position:
               
chr29:18735620-18735893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
121-405
               

               
Cow position:
               
chr29:9685990-9686270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
126-390
               

               
Cow position:
               
chr29:40891693-40891956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
115, 35
               

               
Conread position:
               
127-351
               

               
Cow position:
               
chr29:14484535-14484761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
127-378
               

               
Cow position:
               
chr29:25474925-25474665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
127-403
               

               
Cow position:
               
chr29:22068738-22069014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 151
               

               
Conread position:
               
127-405
               

               
Cow position:
               
chr29:3704196-3704472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 33
               

               
Conread position:
               
128-388
               

               
Cow position:
               
chr29:1556940-1556680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 115
               

               
Conread position:
               
130-405
               

               
Cow position:
               
chr29:2744268-2744541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
65, 29
               

               
Conread position:
               
130-405
               

               
Cow position:
               
chr29:26771437-26771172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
132-405
               

               
Cow position:
               
chr29:2984888-2984618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
133-371
               

               
Cow position:
               
chr29:24103543-24103784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 123
               

               
Conread position:
               
133-384
               

               
Cow position:
               
chr29:23983959-23984212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
133-392
               

               
Cow position:
               
chr29:8926465-8926715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
174, 39
               

               
Conread position:
               
133-396
               

               
Cow position:
               
chr29:4480174-4480432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
133-405
               

               
Cow position:
               
chr29:5892841-5892578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 29
               

               
Conread position:
               
135-389
               

               
Cow position:
               
chr29:585278-585029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 121
               

               
Conread position:
               
135-392
               

               
Cow position:
               
chr29:26778877-26778628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
61, 34
               

               
Conread position:
               
135-405
               

               
Cow position:
               
chr29:8163861-8164132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
135-405
               

               
Cow position:
               
chr29:35636426-35636155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
126, 37
               

               
Conread position:
               
143-382
               

               
Cow position:
               
chr29:20903299-20903534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
53, 22
               

               
Conread position:
               
143-400
               

               
Cow position:
               
chr29:732607-732358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
144-402
               

               
Cow position:
               
chr29:27008111-27007851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
30, 86
               

               
Conread position:
               
150-405
               

               
Cow position:
               
chr29:41811603-41811846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 69
               

               
Conread position:
               
151-401
               

               
Cow position:
               
chr29:4120832-4120581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 155
               

               
Conread position:
               
152-405
               

               
Cow position:
               
chr29:479364-479117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
92, 16
               

               
Conread position:
               
152-405
               

               
Cow position:
               
chr29:1956110-1956358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
152-405
               

               
Cow position:
               
chr29:18878513-18878770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
19, 142
               

               
Conread position:
               
152-405
               

               
Cow position:
               
chr29:26980383-26980126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
23, 106
               

               
Conread position:
               
155-403
               

               
Cow position:
               
chr29:4805212-4804966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
38, 64
               

               
Conread position:
               
156-405
               

               
Cow position:
               
chr29:23874436-23874187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 54
               

               
Conread position:
               
157-400
               

               
Cow position:
               
chr29:8669342-8669091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
157-405
               

               
Cow position:
               
chr29:1325420-1325172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
159-398
               

               
Cow position:
               
chr29:37599233-37599466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 113
               

               
Conread position:
               
159-404
               

               
Cow position:
               
chr29:6844654-6844897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
162-370
               

               
Cow position:
               
chr29:3711363-3711151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
162-372
               

               
Cow position:
               
chr29:4520309-4520099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
16, 95
               

               
Conread position:
               
162-402
               

               
Cow position:
               
chr29:22175660-22175427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
162-405
               

               
Cow position:
               
chr29:42268668-42268422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 80
               

               
Conread position:
               
162-406
               

               
Cow position:
               
chr29:26335403-26335648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
163-402
               

               
Cow position:
               
chr29:17409307-17409067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
164-402
               

               
Cow position:
               
chr29:15940662-15940904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
14, 92
               

               
Conread position:
               
168-392
               

               
Cow position:
               
chr29:4194150-4194377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 107
               

               
Conread position:
               
168-404
               

               
Cow position:
               
chr29:2522535-2522310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 33
               

               
Conread position:
               
168-405
               

               
Cow position:
               
chr29:36217082-36216849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 86
               

               
Conread position:
               
169-385
               

               
Cow position:
               
chr29:706982-707194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
172-365
               

               
Cow position:
               
chr29:1229569-1229379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 52
               

               
Conread position:
               
172-374
               

               
Cow position:
               
chr29:23844799-23844595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 79
               

               
Conread position:
               
172-398
               

               
Cow position:
               
chr29:109660-109448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
172-400
               

               
Cow position:
               
chr29:5919359-5919589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
172-405
               

               
Cow position:
               
chr29:4066049-4065819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
24, 84
               

               
Conread position:
               
172-406
               

               
Cow position:
               
chr29:28197044-28197278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
24, 81
               

               
Conread position:
               
173-397
               

               
Cow position:
               
chr29:27009379-27009157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
173-405
               

               
Cow position:
               
chr29:26334425-26334658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
174-400
               

               
Cow position:
               
chr29:36586540-36586318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
5, 76
               

               
Conread position:
               
174-403
               

               
Cow position:
               
chr29:17607376-17607149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
174-405
               

               
Cow position:
               
chr29:7666068-7666296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
174-405
               

               
Cow position:
               
chr29:29477073-29477301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
175-375
               

               
Cow position:
               
chr29:23697939-23697740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
21, 106
               

               
Conread position:
               
175-400
               

               
Cow position:
               
chr29:9912132-9911913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
175-400
               

               
Cow position:
               
chr29:29769391-29769610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
175-400
               

               
Cow position:
               
chr29:32799748-32799967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
21, 118
               

               
Conread position:
               
175-404
               

               
Cow position:
               
chr29:35405832-35406062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
175-405
               

               
Cow position:
               
chr29:17151-17374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
175-405
               

               
Cow position:
               
chr29:4328376-4328165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
66, 24
               

               
Conread position:
               
175-405
               

               
Cow position:
               
chr29:26615762-26615998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
175-405
               

               
Cow position:
               
chr29:36530825-36530594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
176-343
               

               
Cow position:
               
chr29:22778218-22778389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
176-343
               

               
Cow position:
               
chr29:41365071-41364902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 127
               

               
Conread position:
               
176-366
               

               
Cow position:
               
chr29:39643134-39642946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 113
               

               
Conread position:
               
176-372
               

               
Cow position:
               
chr29:11705081-11704886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
19, 66
               

               
Conread position:
               
176-376
               

               
Cow position:
               
chr29:17668448-17668255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
176-384
               

               
Cow position:
               
chr29:40852888-40852688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
176-386
               

               
Cow position:
               
chr29:11915779-11915567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 208
               

               
Conread position:
               
176-392
               

               
Cow position:
               
chr29:32963515-32963298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
176-395
               

               
Cow position:
               
chr29:35738312-35738529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
176-396
               

               
Cow position:
               
chr29:18212034-18212242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
176-401
               

               
Cow position:
               
chr29:28868594-28868366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
22, 79
               

               
Conread position:
               
176-401
               

               
Cow position:
               
chr29:29057138-29056918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
176-402
               

               
Cow position:
               
chr29:12798878-12798664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
176-402
               

               
Cow position:
               
chr29:20178174-20178391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
176-402
               

               
Cow position:
               
chr29:24345492-24345730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
20, 79
               

               
Conread position:
               
176-402
               

               
Cow position:
               
chr29:24952647-24952420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
176-402
               

               
Cow position:
               
chr29:39567646-39567422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
176-404
               

               
Cow position:
               
chr29:12783997-12784224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
20, 121
               

               
Conread position:
               
176-404
               

               
Cow position:
               
chr29:16195801-16195584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
65, 22
               

               
Conread position:
               
176-404
               

               
Cow position:
               
chr29:40166199-40165976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
176-404
               

               
Cow position:
               
chr29:42406631-42406395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
20, 116
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr29:478063-477838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
57, 65
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr29:1022254-1022009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr29:2071614-2071837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr29:5977154-5977390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 164
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr29:6293515-6293736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
19, 115
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr29:6925970-6925753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr29:8125632-8125862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr29:9139372-9139139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 109
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr29:19338946-19338710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr29:24624205-24623972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr29:26017545-26017780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr29:31926330-31926559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
18, 108
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr29:40096922-40096696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr29:41530806-41530581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
177-324
               

               
Cow position:
               
chr29:4334684-4334539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
19, 111
               

               
Conread position:
               
177-351
               

               
Cow position:
               
chr29:2533017-2532846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
177-378
               

               
Cow position:
               
chr29:16309699-16309508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
177-383
               

               
Cow position:
               
chr29:36183239-36183029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 66
               

               
Conread position:
               
177-397
               

               
Cow position:
               
chr29:16757016-16756794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 194
               

               
Conread position:
               
177-403
               

               
Cow position:
               
chr29:40583751-40583530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
177-404
               

               
Cow position:
               
chr29:94596-94815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 44
               

               
Conread position:
               
177-404
               

               
Cow position:
               
chr29:6217590-6217816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
177-404
               

               
Cow position:
               
chr29:25088708-25088485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
20, 54
               

               
Conread position:
               
177-405
               

               
Cow position:
               
chr29:2644345-2644574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
19, 150
               

               
Conread position:
               
177-405
               

               
Cow position:
               
chr29:12004803-12005033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
18, 114
               

               
Conread position:
               
177-405
               

               
Cow position:
               
chr29:32521827-32521600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
178-392
               

               
Cow position:
               
chr29:17222370-17222152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
178-392
               

               
Cow position:
               
chr29:22162296-22162509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
178-396
               

               
Cow position:
               
chr29:21237072-21236856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
178-402
               

               
Cow position:
               
chr29:29975000-29974775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
16, 77
               

               
Conread position:
               
178-403
               

               
Cow position:
               
chr29:28195556-28195786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 106
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr29:1306904-1307133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 114
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr29:16175314-16175540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 106
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr29:20429015-20429241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 24
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr29:28775503-28775723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
63, 94
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr29:34745704-34745923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr29:35630453-35630685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
179-335
               

               
Cow position:
               
chr29:3100301-3100461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
179-390
               

               
Cow position:
               
chr29:13554091-13553878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
10, 78
               

               
Conread position:
               
179-392
               

               
Cow position:
               
chr29:34297615-34297821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
179-395
               

               
Cow position:
               
chr29:11562569-11562355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 75
               

               
Conread position:
               
179-396
               

               
Cow position:
               
chr29:19389443-19389226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
16, 113
               

               
Conread position:
               
179-397
               

               
Cow position:
               
chr29:3237399-3237620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
179-400
               

               
Cow position:
               
chr29:7407932-7408153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
179-401
               

               
Cow position:
               
chr29:19762226-19762007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
62, 21
               

               
Conread position:
               
179-404
               

               
Cow position:
               
chr29:961880-961651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
179-404
               

               
Cow position:
               
chr29:45650387-45650610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
17, 64
               

               
Conread position:
               
179-405
               

               
Cow position:
               
chr29:87060-87286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
17, 174
               

               
Conread position:
               
179-405
               

               
Cow position:
               
chr29:3396062-3395841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
14, 64
               

               
Conread position:
               
179-405
               

               
Cow position:
               
chr29:11684963-11684743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
179-405
               

               
Cow position:
               
chr29:21443385-21443613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 113
               

               
Conread position:
               
179-406
               

               
Cow position:
               
chr29:14501547-14501324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
180-384
               

               
Cow position:
               
chr29:19792318-19792528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
15, 175
               

               
Conread position:
               
180-396
               

               
Cow position:
               
chr29:13372620-13372403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 117
               

               
Conread position:
               
180-404
               

               
Cow position:
               
chr29:29312565-29312784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
180-404
               

               
Cow position:
               
chr29:44901749-44901970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
15, 104
               

               
Conread position:
               
183-372
               

               
Cow position:
               
chr29:22714772-22714964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
183-383
               

               
Cow position:
               
chr29:3502519-3502309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
12, 60
               

               
Conread position:
               
183-391
               

               
Cow position:
               
chr29:7956038-7956239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
183-399
               

               
Cow position:
               
chr29:4625045-4625256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
12, 49
               

               
Conread position:
               
183-399
               

               
Cow position:
               
chr29:37785222-37785442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
183-401
               

               
Cow position:
               
chr29:20673848-20674071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
12, 116
               

               
Conread position:
               
183-402
               

               
Cow position:
               
chr29:13615685-13615909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 113
               

               
Conread position:
               
183-402
               

               
Cow position:
               
chr29:35434819-35434604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
183-403
               

               
Cow position:
               
chr29:2414862-2415078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 87
               

               
Conread position:
               
183-404
               

               
Cow position:
               
chr29:21933163-21933381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
183-404
               

               
Cow position:
               
chr29:35281448-35281235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 114
               

               
Conread position:
               
183-405
               

               
Cow position:
               
chr29:465446-465671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
183-405
               

               
Cow position:
               
chr29:15738390-15738613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 67
               

               
Conread position:
               
183-405
               

               
Cow position:
               
chr29:15944523-15944300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
13, 107
               

               
Conread position:
               
185-403
               

               
Cow position:
               
chr29:8935440-8935219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
185-404
               

               
Cow position:
               
chr29:9078623-9078841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr29:528335-528559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr29:2837104-2837327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr29:5238673-5238449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr29:5241583-5241359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr29:10627673-10627897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr29:14207067-14207291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr29:16348395-16348172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr29:17041600-17041378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 57
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr29:19619084-19619308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
9, 54
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr29:25926599-25926823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr29:28689565-28689341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 57
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr29:28696214-28696437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
187-405
               

               
Cow position:
               
chr29:24604200-24604417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 183
               

               
Conread position:
               
191-400
               

               
Cow position:
               
chr29:5947852-5948051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
191-405
               

               
Cow position:
               
chr29:32353772-32353559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
191-405
               

               
Cow position:
               
chr29:38246804-38247014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
191-406
               

               
Cow position:
               
chr29:17773886-17773671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
192-409
               

               
Cow position:
               
chr29:31928921-31928706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
193-384
               

               
Cow position:
               
chr29:10659399-10659595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
51, 192
               

               
Conread position:
               
193-396
               

               
Cow position:
               
chr29:21000582-21000381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
48, 60
               

               
Conread position:
               
193-398
               

               
Cow position:
               
chr29:2188409-2188599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
193-402
               

               
Cow position:
               
chr29:3502991-3502795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
193-403
               

               
Cow position:
               
chr29:16609681-16609471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
50, 145
               

               
Conread position:
               
193-404
               

               
Cow position:
               
chr29:9709634-9709431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
193-404
               

               
Cow position:
               
chr29:12680097-12679886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr29:43548-43762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr29:1933615-1933827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
48, 108
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr29:11696469-11696264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 60
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr29:16097377-16097590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
51, 43
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr29:21196713-21196919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
113, 33
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr29:24650421-24650634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr29:26160655-26160869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr29:28884023-28883811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
60, 109
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr29:32290547-32290333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 52
               

               
Conread position:
               
193-405
               

               
Cow position:
               
chr29:40337590-40337793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
193-406
               

               
Cow position:
               
chr29:38581915-38581699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
48, 170
               

               
Conread position:
               
194-405
               

               
Cow position:
               
chr29:26130721-26130514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
74, 35
               

               
Conread position:
               
194-405
               

               
Cow position:
               
chr29:26734967-26734764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
196-353
               

               
Cow position:
               
chr29:28446320-28446477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 57
               

               
Conread position:
               
196-385
               

               
Cow position:
               
chr29:3252171-3251985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
48, 43
               

               
Conread position:
               
196-404
               

               
Cow position:
               
chr29:5098824-5099030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
196-405
               

               
Cow position:
               
chr29:39111379-39111577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
44, 57
               

               
Conread position:
               
200-392
               

               
Cow position:
               
chr29:40117500-40117316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
201-402
               

               
Cow position:
               
chr29:19756378-19756182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 38
               

               
Conread position:
               
201-404
               

               
Cow position:
               
chr29:4202053-4201851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 38
               

               
Conread position:
               
201-405
               

               
Cow position:
               
chr29:10456628-10456821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
201-405
               

               
Cow position:
               
chr29:23119445-23119646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
43, 38
               

               
Conread position:
               
202-392
               

               
Cow position:
               
chr29:4691748-4691942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
202-405
               

               
Cow position:
               
chr29:5425690-5425894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
202-405
               

               
Cow position:
               
chr29:9917448-9917652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
202-405
               

               
Cow position:
               
chr29:11114786-11114582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
202-405
               

               
Cow position:
               
chr29:18338611-18338815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
202-405
               

               
Cow position:
               
chr29:20626506-20626308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 96
               

               
Conread position:
               
202-405
               

               
Cow position:
               
chr29:20933642-20933436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
202-405
               

               
Cow position:
               
chr29:25957765-25957969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
204-403
               

               
Cow position:
               
chr29:40902794-40902986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
204-405
               

               
Cow position:
               
chr29:26289159-26289355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
37, 49
               

               
Conread position:
               
204-405
               

               
Cow position:
               
chr29:35501723-35501917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
35, 49
               

               
Conread position:
               
206-402
               

               
Cow position:
               
chr29:17109894-17109704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
35, 47
               

               
Conread position:
               
206-403
               

               
Cow position:
               
chr29:30028498-30028698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
208-405
               

               
Cow position:
               
chr29:686262-686460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
33, 92
               

               
Conread position:
               
209-396
               

               
Cow position:
               
chr29:41849886-41850073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
210-405
               

               
Cow position:
               
chr29:22948738-22948932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
187, 35
               

               
Conread position:
               
213-405
               

               
Cow position:
               
chr29:4874974-4875172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
216-396
               

               
Cow position:
               
chr29:6813360-6813183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
216-404
               

               
Cow position:
               
chr29:18748665-18748852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
22, 154
               

               
Conread position:
               
216-404
               

               
Cow position:
               
chr29:43252770-43252955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 68
               

               
Conread position:
               
216-405
               

               
Cow position:
               
chr29:32308406-32308593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
28, 23
               

               
Conread position:
               
217-405
               

               
Cow position:
               
chr29:406345-406533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
217-405
               

               
Cow position:
               
chr29:14889040-14888852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 133
               

               
Conread position:
               
217-405
               

               
Cow position:
               
chr29:24033717-24033527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
217-405
               

               
Cow position:
               
chr29:38910084-38910273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
226-372
               

               
Cow position:
               
chr29:16735096-16735242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
226-403
               

               
Cow position:
               
chr29:5046371-5046541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
229-395
               

               
Cow position:
               
chr29:36356750-36356592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
230-400
               

               
Cow position:
               
chr29:41076121-41076292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
230-405
               

               
Cow position:
               
chr29:11135989-11136157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
232-401
               

               
Cow position:
               
chr29:36243244-36243074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
232-405
               

               
Cow position:
               
chr29:2263122-2263297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
236-405
               

               
Cow position:
               
chr29:6455779-6455609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
236-405
               

               
Cow position:
               
chr29:15767492-15767662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
236-405
               

               
Cow position:
               
chr29:34293268-34293438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
237-402
               

               
Cow position:
               
chr29:18085487-18085324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 15
               

               
Conread position:
               
238-405
               

               
Cow position:
               
chr29:18781761-18781597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
6, 61
               

               
Conread position:
               
239-405
               

               
Cow position:
               
chr29:45588579-45588742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
243-395
               

               
Cow position:
               
chr29:21665859-21665711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
243-401
               

               
Cow position:
               
chr29:26137679-26137521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
10, 147
               

               
Conread position:
               
243-405
               

               
Cow position:
               
chr29:5063017-5062863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
245-403
               

               
Cow position:
               
chr29:30433570-30433412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-405
               

               
Cow position:
               
chr29:3584234-3584394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-405
               

               
Cow position:
               
chr29:21265621-21265466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
245-405
               

               
Cow position:
               
chr29:22721017-22720859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
246-402
               

               
Cow position:
               
chr29:134083-133926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
247-405
               

               
Cow position:
               
chr29:29066311-29066157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
252-413
               

               
Cow position:
               
chr29:254965-254803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
253-405
               

               
Cow position:
               
chr29:1582744-1582895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
270-405
               

               
Cow position:
               
chr29:9333010-9332875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 5
               

               
Conread position:
               
275-404
               

               
Cow position:
               
chr29:7725043-7724912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
283-405
               

               
Cow position:
               
chr29:7290746-7290627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
302-396
               

               
Cow position:
               
chr29:38731458-38731365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
302-405
               

               
Cow position:
               
chr29:15289574-15289471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
302-405
               

               
Cow position:
               
chr29:43516847-43516948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
92, 0
               
Show alignments to all cow chromosomes.