Cow genome map
| Conread name: | Ss1.1-Lym1-jns57_G02.f.5 |
| Conread position: | 1-113 |
| Cow position: | chr3:26346042-26346154 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 93-210 |
| Cow position: | chr3:26347250-26347367 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-291 |
| Cow position: | chr3:26349702-26349782 (view UCSC Genome Browser custom track) |
| Alignm length: | 81 |
| Alignm identity: | 78 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 291-433 |
| Cow position: | chr3:26350078-26350219 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 134 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 422-547 |
| Cow position: | chr3:26350318-26350443 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 122 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 545-761 |
| Cow position: | chr3:26351057-26351273 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 760-902 |
| Cow position: | chr3:26352851-26352993 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 142 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 902-1067 |
| Cow position: | chr3:26353081-26353246 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1065-1175 |
| Cow position: | chr3:26354566-26354676 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1173-1350 |
| Cow position: | chr3:26355251-26355428 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1341-1469 |
| Cow position: | chr3:26356055-26356183 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 119 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1462-1584 |
| Cow position: | chr3:26357008-26357130 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 120 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1582-1805 |
| Cow position: | chr3:26359836-26360059 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 106 |
| Conread position: | 1759-1926 |
| Cow position: | chr3:26360822-26360989 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1926-2063 |
| Cow position: | chr3:26361544-26361681 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 135 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2054-3218 |
| Cow position: | chr3:26362100-26363259 (view UCSC Genome Browser custom track) |
| Alignm length: | 1186 |
| Alignm identity: | 1097 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 369, 456 |
| Conread position: | 3030-3365 |
| Cow position: | chr3:26363310-26363641 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 17 |
Show alignments to all cow chromosomes.