Cow genome map
| Conread name: | Ss1.1-Lym1-jns86_C04.f.5 |
| Conread position: | 1-289 |
| Cow position: | chrX:21816892-21816605 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 88, 11 |
| Conread position: | 2-159 |
| Cow position: | chrX:24286682-24286526 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 86, 96 |
| Conread position: | 2-223 |
| Cow position: | chrX:23253591-23253813 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 111, 58 |
| Conread position: | 2-225 |
| Cow position: | chrX:18518663-18518435 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 9, 162 |
| Conread position: | 2-257 |
| Cow position: | chrX:13403123-13403381 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 159, 68 |
| Conread position: | 2-280 |
| Cow position: | chrX:11675702-11675412 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 30, 142 |
| Conread position: | 2-287 |
| Cow position: | chrX:37981010-37980726 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 10, 92 |
| Conread position: | 3-158 |
| Cow position: | chrX:19391649-19391806 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 96, 57 |
| Conread position: | 3-222 |
| Cow position: | chrX:11851150-11851368 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 105, 77 |
| Conread position: | 3-291 |
| Cow position: | chrX:37137645-37137948 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 26 |
| Conread position: | 4-144 |
| Cow position: | chrX:502939-503082 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 4-152 |
| Cow position: | chrX:25653709-25653558 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 4-183 |
| Cow position: | chrX:30785179-30784998 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 112, 43 |
| Conread position: | 4-241 |
| Cow position: | chrX:35552963-35552728 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 98, 43 |
| Conread position: | 4-251 |
| Cow position: | chrX:6672403-6672147 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 107, 124 |
| Conread position: | 4-269 |
| Cow position: | chrX:4440475-4440200 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 112, 43 |
| Conread position: | 4-275 |
| Cow position: | chrX:1330174-1330450 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 4-276 |
| Cow position: | chrX:2186881-2186600 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 8, 52 |
| Conread position: | 4-276 |
| Cow position: | chrX:20505329-20505053 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 102, 26 |
| Conread position: | 4-280 |
| Cow position: | chrX:4590572-4590292 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 207 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 82, 24 |
| Conread position: | 4-280 |
| Cow position: | chrX:18699735-18700018 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 105, 145 |
| Conread position: | 4-280 |
| Cow position: | chrX:40353932-40353647 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 102, 28 |
| Conread position: | 4-287 |
| Cow position: | chrX:6472334-6472042 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 4-328 |
| Cow position: | chrX:19127019-19127341 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 99, 43 |
| Conread position: | 5-269 |
| Cow position: | chrX:9910135-9910400 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 104, 140 |
| Conread position: | 5-276 |
| Cow position: | chrX:2147933-2147663 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 98 |
| Conread position: | 5-380 |
| Cow position: | chrX:20958201-20957799 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 101, 15 |
| Conread position: | 6-249 |
| Cow position: | chrX:37236624-37236378 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 102, 125 |
| Conread position: | 6-275 |
| Cow position: | chrX:4601033-4601296 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 164, 37 |
| Conread position: | 6-287 |
| Cow position: | chrX:25453794-25453520 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 103, 138 |
| Conread position: | 7-280 |
| Cow position: | chrX:19017616-19017903 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 108, 29 |
| Conread position: | 8-284 |
| Cow position: | chrX:37749277-37748990 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 101, 155 |
| Conread position: | 9-195 |
| Cow position: | chrX:1427893-1427708 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 97, 61 |
| Conread position: | 9-276 |
| Cow position: | chrX:4625532-4625252 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 104, 77 |
| Conread position: | 11-166 |
| Cow position: | chrX:40350515-40350365 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 11-275 |
| Cow position: | chrX:4019304-4019584 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 101, 142 |
| Conread position: | 16-278 |
| Cow position: | chrX:4630764-4631031 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 97, 61 |
| Conread position: | 25-280 |
| Cow position: | chrX:25921200-25921444 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 30-289 |
| Cow position: | chrX:21885501-21885771 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 38, 245 |
| Conread position: | 50-287 |
| Cow position: | chrX:957067-956816 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 238 |
| Conread position: | 226-604 |
| Cow position: | chrX:7425402-7425027 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 14, 19 |
| Conread position: | 235-596 |
| Cow position: | chrX:42499102-42499463 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 72, 33 |
| Conread position: | 322-604 |
| Cow position: | chrX:2186101-2185832 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 160, 71 |
| Conread position: | 324-671 |
| Cow position: | chrX:40789045-40788699 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 102, 71 |
| Conread position: | 325-606 |
| Cow position: | chrX:42530614-42530889 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 157, 20 |
| Conread position: | 332-601 |
| Cow position: | chrX:38840721-38840455 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 150, 63 |
| Conread position: | 337-604 |
| Cow position: | chrX:31338804-31338542 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 95, 67 |
| Conread position: | 411-604 |
| Cow position: | chrX:18989258-18989063 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 415-604 |
| Cow position: | chrX:33589925-33589737 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 12 |
| Conread position: | 418-588 |
| Cow position: | chrX:23666966-23666797 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 418-671 |
| Cow position: | chrX:42381641-42381877 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 9 |
| Conread position: | 439-604 |
| Cow position: | chrX:39126086-39125917 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 459-604 |
| Cow position: | chrX:2147061-2146915 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 23, 5 |
| Conread position: | 459-604 |
| Cow position: | chrX:17663169-17663315 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 25, 5 |
| Conread position: | 459-604 |
| Cow position: | chrX:18695178-18695323 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 5 |
| Conread position: | 459-606 |
| Cow position: | chrX:35633010-35633158 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 23, 5 |
| Conread position: | 460-593 |
| Cow position: | chrX:22139340-22139475 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 464-579 |
| Cow position: | chrX:32012317-32012433 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 464-594 |
| Cow position: | chrX:40142455-40142587 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 464-595 |
| Cow position: | chrX:2300670-2300537 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 464-595 |
| Cow position: | chrX:39700957-39700825 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 18, 101 |
| Conread position: | 464-596 |
| Cow position: | chrX:11674797-11674665 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 77 |
| Conread position: | 464-599 |
| Cow position: | chrX:19930169-19930035 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 464-600 |
| Cow position: | chrX:38667895-38668033 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 464-601 |
| Cow position: | chrX:3582936-3582797 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 464-601 |
| Cow position: | chrX:14908755-14908617 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 40 |
| Conread position: | 464-601 |
| Cow position: | chrX:18293675-18293539 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 18, 99 |
| Conread position: | 464-601 |
| Cow position: | chrX:43199176-43199038 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 464-604 |
| Cow position: | chrX:158092-158231 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 19, 58 |
| Conread position: | 464-604 |
| Cow position: | chrX:160293-160437 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 464-604 |
| Cow position: | chrX:1728829-1728973 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 464-604 |
| Cow position: | chrX:5246993-5246851 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 464-604 |
| Cow position: | chrX:6277717-6277858 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 69 |
| Conread position: | 464-604 |
| Cow position: | chrX:9538282-9538141 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 464-604 |
| Cow position: | chrX:9837859-9837717 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 464-604 |
| Cow position: | chrX:19437348-19437490 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 464-604 |
| Cow position: | chrX:19878776-19878636 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 78 |
| Conread position: | 464-604 |
| Cow position: | chrX:24827078-24826936 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 464-604 |
| Cow position: | chrX:25281745-25281887 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 17, 84 |
| Conread position: | 464-604 |
| Cow position: | chrX:27070128-27070269 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 50 |
| Conread position: | 464-604 |
| Cow position: | chrX:31385458-31385321 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 21, 98 |
| Conread position: | 464-604 |
| Cow position: | chrX:34993915-34993773 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 464-604 |
| Cow position: | chrX:36557529-36557388 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 464-609 |
| Cow position: | chrX:26749134-26749280 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 18, 144 |
| Conread position: | 464-613 |
| Cow position: | chrX:27288003-27288154 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 464-614 |
| Cow position: | chrX:17265307-17265458 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 18, 144 |
| Conread position: | 464-635 |
| Cow position: | chrX:35441290-35441121 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 18, 145 |
| Conread position: | 464-671 |
| Cow position: | chrX:17200542-17200339 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 18, 145 |
| Conread position: | 464-671 |
| Cow position: | chrX:20504502-20504314 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 115, 32 |
| Conread position: | 464-671 |
| Cow position: | chrX:21815908-21815715 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 18, 141 |
| Conread position: | 464-671 |
| Cow position: | chrX:40544871-40545070 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 19, 94 |
| Conread position: | 464-671 |
| Cow position: | chrX:45448395-45448196 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 20, 110 |
| Conread position: | 464-674 |
| Cow position: | chrX:3808145-3807942 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 18, 136 |
| Conread position: | 464-674 |
| Cow position: | chrX:19127488-19127700 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 115, 163 |
| Conread position: | 465-600 |
| Cow position: | chrX:3145746-3145609 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 465-602 |
| Cow position: | chrX:12091930-12092068 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 126 |
| Conread position: | 465-604 |
| Cow position: | chrX:41683099-41682958 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 466-600 |
| Cow position: | chrX:13058301-13058165 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 466-604 |
| Cow position: | chrX:8517345-8517205 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 466-604 |
| Cow position: | chrX:20976322-20976464 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 466-606 |
| Cow position: | chrX:37955640-37955498 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 466-631 |
| Cow position: | chrX:6203246-6203084 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 114, 141 |
| Conread position: | 468-604 |
| Cow position: | chrX:30729761-30729899 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 481-595 |
| Cow position: | chrX:40279528-40279414 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 100, 56 |
| Conread position: | 481-599 |
| Cow position: | chrX:31571103-31570987 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 100, 12 |
| Conread position: | 481-604 |
| Cow position: | chrX:17933855-17933730 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 481-604 |
| Cow position: | chrX:23414661-23414784 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 99, 90 |
| Conread position: | 481-604 |
| Cow position: | chrX:33803295-33803418 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 97, 12 |
| Conread position: | 481-604 |
| Cow position: | chrX:36840588-36840464 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 481-604 |
| Cow position: | chrX:39546252-39546376 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 481-670 |
| Cow position: | chrX:6654589-6654775 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 481-671 |
| Cow position: | chrX:20131159-20131338 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 100, 90 |
| Conread position: | 483-604 |
| Cow position: | chrX:4329359-4329482 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 486-604 |
| Cow position: | chrX:37906668-37906547 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 486-606 |
| Cow position: | chrX:38999619-38999497 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 489-600 |
| Cow position: | chrX:19210676-19210789 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 7, 0 |
Show alignments to all cow chromosomes.