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Cow genome map

           
Conread name:
           
Ss1.1-Lym1-jns97_C07.f.5
        

               
Conread position:
               
31-280
               

               
Cow position:
               
chr1:29413855-29414117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
112, 93
               

               
Conread position:
               
37-791
               

               
Cow position:
               
chr1:72137276-72136519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 37
               

               
Conread position:
               
152-566
               

               
Cow position:
               
chr1:24651290-24650863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 62
               

               
Conread position:
               
154-544
               

               
Cow position:
               
chr1:42869710-42870113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 167
               

               
Conread position:
               
154-576
               

               
Cow position:
               
chr1:40512852-40513280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 171
               

               
Conread position:
               
156-534
               

               
Cow position:
               
chr1:21720406-21720027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
166-706
               

               
Cow position:
               
chr1:55322543-55323094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 84
               

               
Conread position:
               
169-535
               

               
Cow position:
               
chr1:94253428-94253055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 7
               

               
Conread position:
               
182-632
               

               
Cow position:
               
chr1:38387219-38387641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 23
               

               
Conread position:
               
258-742
               

               
Cow position:
               
chr1:46835946-46835452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
266-783
               

               
Cow position:
               
chr1:5319157-5318646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 19
               

               
Conread position:
               
278-748
               

               
Cow position:
               
chr1:67901513-67901997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 306
               

               
Conread position:
               
278-782
               

               
Cow position:
               
chr1:31330387-31330902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
278-783
               

               
Cow position:
               
chr1:13880520-13880020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
68, 56
               

               
Conread position:
               
278-791
               

               
Cow position:
               
chr1:25886760-25887278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 41
               

               
Conread position:
               
278-791
               

               
Cow position:
               
chr1:30027146-30027665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 88
               

               
Conread position:
               
286-728
               

               
Cow position:
               
chr1:89479707-89479262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 158
               

               
Conread position:
               
290-790
               

               
Cow position:
               
chr1:59933919-59933432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 44
               

               
Conread position:
               
290-791
               

               
Cow position:
               
chr1:54365439-54365943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
297-790
               

               
Cow position:
               
chr1:79109652-79109174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
203, 88
               

               
Conread position:
               
298-631
               

               
Cow position:
               
chr1:78361121-78360784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
76, 104
               

               
Conread position:
               
325-791
               

               
Cow position:
               
chr1:34689701-34689217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 257
               

               
Conread position:
               
327-520
               

               
Cow position:
               
chr1:72038991-72039196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
332-783
               

               
Cow position:
               
chr1:37419423-37419864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
24, 130
               

               
Conread position:
               
334-790
               

               
Cow position:
               
chr1:57656884-57656429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 7
               

               
Conread position:
               
335-790
               

               
Cow position:
               
chr1:19992349-19992798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
41, 51
               

               
Conread position:
               
338-791
               

               
Cow position:
               
chr1:101857651-101858106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
340-783
               

               
Cow position:
               
chr1:85780442-85780892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 248
               

               
Conread position:
               
341-523
               

               
Cow position:
               
chr1:18027435-18027620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
155, 22
               

               
Conread position:
               
341-548
               

               
Cow position:
               
chr1:30534689-30534891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
341-557
               

               
Cow position:
               
chr1:65386663-65386443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
341-688
               

               
Cow position:
               
chr1:85882337-85881993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
341-729
               

               
Cow position:
               
chr1:76622622-76623018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
341-734
               

               
Cow position:
               
chr1:58883733-58884133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
341-739
               

               
Cow position:
               
chr1:73070721-73071127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
341-746
               

               
Cow position:
               
chr1:94660017-94659615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
341-749
               

               
Cow position:
               
chr1:57568287-57567870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
341-763
               

               
Cow position:
               
chr1:28723208-28722778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 22
               

               
Conread position:
               
341-783
               

               
Cow position:
               
chr1:57366797-57367246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
341-790
               

               
Cow position:
               
chr1:3385686-3386128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
341-790
               

               
Cow position:
               
chr1:21999622-22000077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
341-790
               

               
Cow position:
               
chr1:25179696-25180152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
341-790
               

               
Cow position:
               
chr1:42736787-42736336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
341-790
               

               
Cow position:
               
chr1:52358942-52359397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
341-790
               

               
Cow position:
               
chr1:58336170-58335715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
341-790
               

               
Cow position:
               
chr1:62244312-62244769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
341-790
               

               
Cow position:
               
chr1:69403315-69402871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
341-790
               

               
Cow position:
               
chr1:76545203-76545664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
341-790
               

               
Cow position:
               
chr1:79636600-79637049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
341-790
               

               
Cow position:
               
chr1:91892788-91893236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
341-790
               

               
Cow position:
               
chr1:97226376-97226823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
341-790
               

               
Cow position:
               
chr1:102434704-102435148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
341-791
               

               
Cow position:
               
chr1:28801066-28801546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 34
               

               
Conread position:
               
341-791
               

               
Cow position:
               
chr1:33712398-33711941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 22
               

               
Conread position:
               
347-717
               

               
Cow position:
               
chr1:88131099-88130726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 16
               

               
Conread position:
               
347-782
               

               
Cow position:
               
chr1:79456644-79457081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 16
               

               
Conread position:
               
349-791
               

               
Cow position:
               
chr1:62853511-62853964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 194
               

               
Conread position:
               
350-783
               

               
Cow position:
               
chr1:56193606-56194046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 12
               

               
Conread position:
               
350-790
               

               
Cow position:
               
chr1:53045461-53045901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
68, 121
               

               
Conread position:
               
351-577
               

               
Cow position:
               
chr1:17941463-17941688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
215, 12
               

               
Conread position:
               
351-783
               

               
Cow position:
               
chr1:13646036-13645617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 12
               

               
Conread position:
               
351-790
               

               
Cow position:
               
chr1:1461008-1461448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 12
               

               
Conread position:
               
351-790
               

               
Cow position:
               
chr1:89770360-89770804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 12
               

               
Conread position:
               
353-782
               

               
Cow position:
               
chr1:76752328-76752767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 224
               

               
Conread position:
               
353-790
               

               
Cow position:
               
chr1:28873399-28872956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 224
               

               
Conread position:
               
356-790
               

               
Cow position:
               
chr1:11862940-11863357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 7
               

               
Conread position:
               
356-790
               

               
Cow position:
               
chr1:18405875-18406311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 219
               

               
Conread position:
               
356-790
               

               
Cow position:
               
chr1:79335484-79335926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 22
               

               
Conread position:
               
363-783
               

               
Cow position:
               
chr1:63501767-63501344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
371-741
               

               
Cow position:
               
chr1:82356022-82355659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
5, 87
               

               
Conread position:
               
371-791
               

               
Cow position:
               
chr1:52918322-52918741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
114, 90
               

               
Conread position:
               
371-791
               

               
Cow position:
               
chr1:77112144-77112565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
12, 193
               

               
Conread position:
               
375-791
               

               
Cow position:
               
chr1:101150135-101149713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 201
               

               
Conread position:
               
376-499
               

               
Cow position:
               
chr1:87515982-87516105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
376-770
               

               
Cow position:
               
chr1:18244083-18244481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 200
               

               
Conread position:
               
376-783
               

               
Cow position:
               
chr1:52232814-52233226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 200
               

               
Conread position:
               
376-783
               

               
Cow position:
               
chr1:72657288-72656866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 200
               

               
Conread position:
               
376-791
               

               
Cow position:
               
chr1:38415099-38414680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 142
               

               
Conread position:
               
376-791
               

               
Cow position:
               
chr1:40308359-40307942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 64
               

               
Conread position:
               
376-791
               

               
Cow position:
               
chr1:45097996-45097584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 41
               

               
Conread position:
               
376-791
               

               
Cow position:
               
chr1:69537198-69536782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 92
               

               
Conread position:
               
376-791
               

               
Cow position:
               
chr1:82918363-82918783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 197
               

               
Conread position:
               
376-791
               

               
Cow position:
               
chr1:87207127-87207539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 19
               

               
Conread position:
               
376-791
               

               
Cow position:
               
chr1:87245112-87244671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 200
               

               
Conread position:
               
376-791
               

               
Cow position:
               
chr1:88635672-88635249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 199
               

               
Conread position:
               
376-791
               

               
Cow position:
               
chr1:89899404-89899824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 6
               

               
Conread position:
               
376-791
               

               
Cow position:
               
chr1:97124109-97123710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 162
               

               
Conread position:
               
377-465
               

               
Cow position:
               
chr1:53198850-53198762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
89
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
377-485
               

               
Cow position:
               
chr1:57424538-57424646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
377-527
               

               
Cow position:
               
chr1:59674750-59674595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
377-632
               

               
Cow position:
               
chr1:5502234-5501972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 199
               

               
Conread position:
               
377-634
               

               
Cow position:
               
chr1:95239670-95239408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 199
               

               
Conread position:
               
377-648
               

               
Cow position:
               
chr1:82912843-82913118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 199
               

               
Conread position:
               
377-654
               

               
Cow position:
               
chr1:9382247-9382526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
120, 93
               

               
Conread position:
               
377-684
               

               
Cow position:
               
chr1:99348737-99349051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 199
               

               
Conread position:
               
377-686
               

               
Cow position:
               
chr1:82652954-82652636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 199
               

               
Conread position:
               
377-695
               

               
Cow position:
               
chr1:40574514-40574189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 41
               

               
Conread position:
               
377-699
               

               
Cow position:
               
chr1:31396991-31396659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 199
               

               
Conread position:
               
377-749
               

               
Cow position:
               
chr1:56144038-56144418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 204
               

               
Conread position:
               
377-761
               

               
Cow position:
               
chr1:29362597-29362204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 199
               

               
Conread position:
               
377-764
               

               
Cow position:
               
chr1:60339606-60339210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 199
               

               
Conread position:
               
377-782
               

               
Cow position:
               
chr1:49973890-49974305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 199
               

               
Conread position:
               
377-783
               

               
Cow position:
               
chr1:8554629-8554214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 199
               

               
Conread position:
               
377-783
               

               
Cow position:
               
chr1:17036256-17036672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 194
               

               
Conread position:
               
377-783
               

               
Cow position:
               
chr1:72081079-72080658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 267
               

               
Conread position:
               
377-783
               

               
Cow position:
               
chr1:78290164-78289767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 199
               

               
Conread position:
               
377-783
               

               
Cow position:
               
chr1:82564804-82564390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 199
               

               
Conread position:
               
377-783
               

               
Cow position:
               
chr1:100597073-100597496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 199
               

               
Conread position:
               
377-785
               

               
Cow position:
               
chr1:82923879-82924296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 199
               

               
Conread position:
               
377-790
               

               
Cow position:
               
chr1:86698917-86699339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 199
               

               
Conread position:
               
377-790
               

               
Cow position:
               
chr1:93854821-93854399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 199
               

               
Conread position:
               
377-791
               

               
Cow position:
               
chr1:11291805-11292226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 112
               

               
Conread position:
               
377-791
               

               
Cow position:
               
chr1:13450507-13450088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 162
               

               
Conread position:
               
377-791
               

               
Cow position:
               
chr1:17012438-17012858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 199
               

               
Conread position:
               
377-791
               

               
Cow position:
               
chr1:18880092-18880515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 199
               

               
Conread position:
               
377-791
               

               
Cow position:
               
chr1:20829190-20828767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 199
               

               
Conread position:
               
377-791
               

               
Cow position:
               
chr1:21087714-21087291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 199
               

               
Conread position:
               
377-791
               

               
Cow position:
               
chr1:28711217-28710794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 199
               

               
Conread position:
               
377-791
               

               
Cow position:
               
chr1:30283242-30283664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 175
               

               
Conread position:
               
377-791
               

               
Cow position:
               
chr1:33851578-33851157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 41
               

               
Conread position:
               
377-791
               

               
Cow position:
               
chr1:39544070-39543649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 200
               

               
Conread position:
               
377-791
               

               
Cow position:
               
chr1:40053656-40053233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 199
               

               
Conread position:
               
377-791
               

               
Cow position:
               
chr1:56163627-56163204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 199
               

               
Conread position:
               
377-791
               

               
Cow position:
               
chr1:56723455-56723033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 198
               

               
Conread position:
               
377-791
               

               
Cow position:
               
chr1:59209838-59210259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 199
               

               
Conread position:
               
377-791
               

               
Cow position:
               
chr1:61309303-61308880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 199
               

               
Conread position:
               
377-791
               

               
Cow position:
               
chr1:62925914-62925491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 199
               

               
Conread position:
               
377-791
               

               
Cow position:
               
chr1:69766763-69766342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 199
               

               
Conread position:
               
377-791
               

               
Cow position:
               
chr1:71562273-71562700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 199
               

               
Conread position:
               
377-791
               

               
Cow position:
               
chr1:80358880-80359291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 148
               

               
Conread position:
               
377-791
               

               
Cow position:
               
chr1:86547834-86548256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 199
               

               
Conread position:
               
377-791
               

               
Cow position:
               
chr1:89425874-89425465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 89
               

               
Conread position:
               
377-791
               

               
Cow position:
               
chr1:91718338-91718756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 138
               

               
Conread position:
               
377-791
               

               
Cow position:
               
chr1:91899297-91898876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 175
               

               
Conread position:
               
378-486
               

               
Cow position:
               
chr1:5355426-5355318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
378-547
               

               
Cow position:
               
chr1:69060784-69060621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
123, 61
               

               
Conread position:
               
378-555
               

               
Cow position:
               
chr1:69922139-69922321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
378-611
               

               
Cow position:
               
chr1:98864854-98865090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
123, 26
               

               
Conread position:
               
378-666
               

               
Cow position:
               
chr1:58201383-58201664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
175, 108
               

               
Conread position:
               
378-790
               

               
Cow position:
               
chr1:39481683-39482102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
123, 198
               

               
Conread position:
               
378-790
               

               
Cow position:
               
chr1:67286785-67286369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 86
               

               
Conread position:
               
378-790
               

               
Cow position:
               
chr1:68607244-68607669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 198
               

               
Conread position:
               
378-790
               

               
Cow position:
               
chr1:72981566-72981146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 198
               

               
Conread position:
               
378-791
               

               
Cow position:
               
chr1:42290682-42290273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 66
               

               
Conread position:
               
378-791
               

               
Cow position:
               
chr1:85791986-85791567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 198
               

               
Conread position:
               
379-791
               

               
Cow position:
               
chr1:56490139-56489717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 197
               

               
Conread position:
               
380-783
               

               
Cow position:
               
chr1:40684393-40684804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 196
               

               
Conread position:
               
381-791
               

               
Cow position:
               
chr1:67834843-67835260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 195
               

               
Conread position:
               
383-790
               

               
Cow position:
               
chr1:8825344-8824938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 14
               

               
Conread position:
               
383-790
               

               
Cow position:
               
chr1:31365784-31366198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 17
               

               
Conread position:
               
383-790
               

               
Cow position:
               
chr1:33551212-33550801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 148
               

               
Conread position:
               
385-790
               

               
Cow position:
               
chr1:63605489-63605903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 191
               

               
Conread position:
               
386-783
               

               
Cow position:
               
chr1:55276193-55276600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 191
               

               
Conread position:
               
386-790
               

               
Cow position:
               
chr1:12061905-12062318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 197
               

               
Conread position:
               
388-631
               

               
Cow position:
               
chr1:84149708-84149461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
108, 73
               

               
Conread position:
               
390-790
               

               
Cow position:
               
chr1:72186590-72186994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 46
               

               
Conread position:
               
390-791
               

               
Cow position:
               
chr1:89739982-89740367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 11
               

               
Conread position:
               
396-790
               

               
Cow position:
               
chr1:48246095-48245690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 182
               

               
Conread position:
               
396-790
               

               
Cow position:
               
chr1:99911240-99910830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 180
               

               
Conread position:
               
398-609
               

               
Cow position:
               
chr1:40954181-40953967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
102, 178
               

               
Conread position:
               
401-776
               

               
Cow position:
               
chr1:55776413-55776046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
211, 84
               

               
Conread position:
               
410-783
               

               
Cow position:
               
chr1:102549513-102549116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
86, 116
               

               
Conread position:
               
412-787
               

               
Cow position:
               
chr1:99020697-99021073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
433-791
               

               
Cow position:
               
chr1:33895925-33895557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 144
               

               
Conread position:
               
440-790
               

               
Cow position:
               
chr1:30058776-30058419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
53, 85
               

               
Conread position:
               
441-759
               

               
Cow position:
               
chr1:77117350-77117681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 135
               

               
Conread position:
               
446-791
               

               
Cow position:
               
chr1:15347357-15347707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
5, 28
               

               
Conread position:
               
447-791
               

               
Cow position:
               
chr1:23051063-23050718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
497-783
               

               
Cow position:
               
chr1:44101572-44101859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 55
               

               
Conread position:
               
497-791
               

               
Cow position:
               
chr1:79920551-79920849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
116, 76
               

               
Conread position:
               
501-748
               

               
Cow position:
               
chr1:20989123-20988873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 70
               

               
Conread position:
               
514-791
               

               
Cow position:
               
chr1:86609347-86609075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 64
               

               
Conread position:
               
587-791
               

               
Cow position:
               
chr1:40513415-40513620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 46
               

               
Conread position:
               
597-791
               

               
Cow position:
               
chr1:6708016-6708216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 38
               
Show alignments to all cow chromosomes.