Cow genome map
| Conread name: | Ss1.1-Lym1-jns97_C07.f.5 |
| Conread position: | 154-692 |
| Cow position: | chr26:9845054-9845583 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 37 |
| Conread position: | 280-665 |
| Cow position: | chr26:9849509-9849900 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 52 |
| Conread position: | 280-665 |
| Cow position: | chr26:9853020-9853410 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 52 |
| Conread position: | 290-702 |
| Cow position: | chr26:12666508-12666088 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 82, 33 |
| Conread position: | 307-782 |
| Cow position: | chr26:20263219-20262761 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 319 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 36, 26 |
| Conread position: | 341-782 |
| Cow position: | chr26:9563009-9563458 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 35 |
| Conread position: | 341-782 |
| Cow position: | chr26:30589024-30589473 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 341-790 |
| Cow position: | chr26:17396582-17397037 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 341-790 |
| Cow position: | chr26:19351165-19351620 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 347-645 |
| Cow position: | chr26:6849096-6849394 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 9 |
| Conread position: | 347-790 |
| Cow position: | chr26:5675501-5675062 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 15 |
| Conread position: | 349-790 |
| Cow position: | chr26:12656612-12656187 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 27 |
| Conread position: | 351-783 |
| Cow position: | chr26:4604850-4605282 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 12 |
| Conread position: | 351-791 |
| Cow position: | chr26:3692129-3691698 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 12 |
| Conread position: | 371-787 |
| Cow position: | chr26:8282742-8283150 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 282 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 9, 63 |
| Conread position: | 374-499 |
| Cow position: | chr26:20255511-20255392 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 376-753 |
| Cow position: | chr26:30783058-30782671 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 194 |
| Conread position: | 377-653 |
| Cow position: | chr26:4806247-4806507 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 236, 110 |
| Conread position: | 377-671 |
| Cow position: | chr26:9113052-9112755 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 199 |
| Conread position: | 377-687 |
| Cow position: | chr26:18852533-18852215 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 198 |
| Conread position: | 377-713 |
| Cow position: | chr26:8919164-8918820 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 199 |
| Conread position: | 377-790 |
| Cow position: | chr26:8870196-8869770 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 111 |
| Conread position: | 377-791 |
| Cow position: | chr26:2198940-2198519 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 199 |
| Conread position: | 377-791 |
| Cow position: | chr26:2352046-2352466 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 101 |
| Conread position: | 377-791 |
| Cow position: | chr26:11253742-11254165 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 111 |
| Conread position: | 377-791 |
| Cow position: | chr26:12588251-12588673 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 57 |
| Conread position: | 377-791 |
| Cow position: | chr26:18855402-18854980 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 198 |
| Conread position: | 378-791 |
| Cow position: | chr26:12574096-12574505 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 163 |
| Conread position: | 378-791 |
| Cow position: | chr26:15144447-15144868 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 198 |
| Conread position: | 379-769 |
| Cow position: | chr26:3030517-3030916 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 197 |
| Conread position: | 405-670 |
| Cow position: | chr26:23603481-23603748 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 171 |
| Conread position: | 438-661 |
| Cow position: | chr26:4334398-4334170 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 58, 138 |
| Conread position: | 498-791 |
| Cow position: | chr26:20255242-20254962 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 70, 138 |
| Conread position: | 567-790 |
| Cow position: | chr26:11536719-11536939 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 19 |
Show alignments to all cow chromosomes.