Cow genome map
| Conread name: | Ss1.1-Lym1-jns97_C07.f.5 |
| Conread position: | 155-598 |
| Cow position: | chr27:8562019-8561572 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 115 |
| Conread position: | 286-775 |
| Cow position: | chr27:6007352-6006864 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 317 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 81, 180 |
| Conread position: | 287-654 |
| Cow position: | chr27:26555659-26556034 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 40 |
| Conread position: | 290-666 |
| Cow position: | chr27:26034718-26035097 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 85, 49 |
| Conread position: | 305-746 |
| Cow position: | chr27:22316911-22316457 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 29 |
| Conread position: | 341-777 |
| Cow position: | chr27:27663181-27662744 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 341-778 |
| Cow position: | chr27:5911148-5910707 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 22 |
| Conread position: | 341-783 |
| Cow position: | chr27:1209637-1209188 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 341-790 |
| Cow position: | chr27:893493-893039 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 341-790 |
| Cow position: | chr27:9992917-9993376 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 376-535 |
| Cow position: | chr27:28078699-28078536 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 376-713 |
| Cow position: | chr27:27051936-27051588 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 195 |
| Conread position: | 376-748 |
| Cow position: | chr27:16432668-16432296 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 107 |
| Conread position: | 376-791 |
| Cow position: | chr27:15277821-15278234 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 56 |
| Conread position: | 376-791 |
| Cow position: | chr27:25002283-25002702 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 198 |
| Conread position: | 377-747 |
| Cow position: | chr27:27752945-27753324 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 199 |
| Conread position: | 377-790 |
| Cow position: | chr27:14460205-14460627 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 199 |
| Conread position: | 377-791 |
| Cow position: | chr27:15541580-15541157 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 199 |
| Conread position: | 377-791 |
| Cow position: | chr27:16034143-16034564 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 199 |
| Conread position: | 378-790 |
| Cow position: | chr27:26325065-26324644 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 198 |
| Conread position: | 378-791 |
| Cow position: | chr27:16439578-16439153 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 201 |
| Conread position: | 381-791 |
| Cow position: | chr27:26227535-26227123 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 115, 52 |
| Conread position: | 382-790 |
| Cow position: | chr27:25804650-25805051 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 90 |
| Conread position: | 395-671 |
| Cow position: | chr27:15638124-15638401 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 101, 38 |
| Conread position: | 418-791 |
| Cow position: | chr27:2364960-2364580 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 158 |
Show alignments to all cow chromosomes.