Cow genome map
| Conread name: | Ss1.1-Lym1-jns97_C07.f.5 |
| Conread position: | 32-131 |
| Cow position: | chr3:24591151-24591249 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 86 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 32-791 |
| Cow position: | chr3:6685968-6685218 (view UCSC Genome Browser custom track) |
| Alignm length: | 778 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 322, 93 |
| Conread position: | 154-544 |
| Cow position: | chr3:63004337-63004726 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 68 |
| Conread position: | 154-695 |
| Cow position: | chr3:52864061-52864621 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 170 |
| Conread position: | 154-783 |
| Cow position: | chr3:24591242-24591862 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 130 |
| Conread position: | 154-790 |
| Cow position: | chr3:29595600-29594961 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 160 |
| Conread position: | 154-791 |
| Cow position: | chr3:48230604-48231233 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 88 |
| Conread position: | 154-791 |
| Cow position: | chr3:64357763-64358409 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 92 |
| Conread position: | 155-790 |
| Cow position: | chr3:66991165-66990561 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 89 |
| Conread position: | 178-785 |
| Cow position: | chr3:19803032-19802422 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 146 |
| Conread position: | 211-531 |
| Cow position: | chr3:14632352-14632678 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 62 |
| Conread position: | 248-630 |
| Cow position: | chr3:2908054-2908432 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 80 |
| Conread position: | 253-670 |
| Cow position: | chr3:39327024-39326600 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 41 |
| Conread position: | 278-709 |
| Cow position: | chr3:34093163-34093606 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 305 |
| Conread position: | 278-790 |
| Cow position: | chr3:36098434-36098947 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 54 |
| Conread position: | 278-791 |
| Cow position: | chr3:4027557-4027030 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 49 |
| Conread position: | 278-791 |
| Cow position: | chr3:14754015-14754539 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 61 |
| Conread position: | 278-791 |
| Cow position: | chr3:45774815-45775318 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 340 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 93, 49 |
| Conread position: | 279-791 |
| Cow position: | chr3:3980670-3980142 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 11 |
| Conread position: | 286-629 |
| Cow position: | chr3:77443150-77442806 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 88, 41 |
| Conread position: | 298-791 |
| Cow position: | chr3:42631276-42630770 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 335 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 68, 25 |
| Conread position: | 306-783 |
| Cow position: | chr3:32842195-32842662 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 330 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 69, 25 |
| Conread position: | 306-791 |
| Cow position: | chr3:60209932-60210421 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 326 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 311-791 |
| Cow position: | chr3:4286126-4285642 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 302, 262 |
| Conread position: | 315-549 |
| Cow position: | chr3:26837520-26837760 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 27, 11 |
| Conread position: | 315-789 |
| Cow position: | chr3:15178558-15178069 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 37 |
| Conread position: | 329-789 |
| Cow position: | chr3:63241542-63241976 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 328 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 16, 143 |
| Conread position: | 335-603 |
| Cow position: | chr3:34395862-34396132 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 161, 44 |
| Conread position: | 340-790 |
| Cow position: | chr3:53515828-53515376 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 24 |
| Conread position: | 341-672 |
| Cow position: | chr3:49544993-49545326 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 341-709 |
| Cow position: | chr3:23213848-23214224 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 341-764 |
| Cow position: | chr3:30314781-30314350 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 22 |
| Conread position: | 341-772 |
| Cow position: | chr3:64017152-64017588 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 341-782 |
| Cow position: | chr3:34030685-34031132 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 341-782 |
| Cow position: | chr3:48060618-48061064 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 341-782 |
| Cow position: | chr3:75040956-75041402 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 22 |
| Conread position: | 341-789 |
| Cow position: | chr3:26949734-26949273 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 186 |
| Conread position: | 341-790 |
| Cow position: | chr3:594790-594336 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 341-790 |
| Cow position: | chr3:5953973-5954429 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 341-790 |
| Cow position: | chr3:19756745-19757202 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 341-790 |
| Cow position: | chr3:36881708-36882157 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 341-790 |
| Cow position: | chr3:40823601-40823146 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 22 |
| Conread position: | 341-790 |
| Cow position: | chr3:59861580-59861123 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 22 |
| Conread position: | 341-790 |
| Cow position: | chr3:66620386-66619936 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 37 |
| Conread position: | 341-790 |
| Cow position: | chr3:69933608-69933155 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 341-790 |
| Cow position: | chr3:72630283-72629826 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 341-790 |
| Cow position: | chr3:78027196-78027653 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 342-791 |
| Cow position: | chr3:36127608-36127148 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 313 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 347-766 |
| Cow position: | chr3:30929849-30929441 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 141, 32 |
| Conread position: | 347-791 |
| Cow position: | chr3:47081449-47081901 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 350-687 |
| Cow position: | chr3:49137336-49137680 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 13 |
| Conread position: | 350-738 |
| Cow position: | chr3:19722419-19722804 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 151, 19 |
| Conread position: | 351-713 |
| Cow position: | chr3:3054808-3054433 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 230 |
| Conread position: | 351-791 |
| Cow position: | chr3:66638943-66638496 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 12 |
| Conread position: | 353-688 |
| Cow position: | chr3:77423882-77423544 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 103 |
| Conread position: | 353-783 |
| Cow position: | chr3:50127671-50128114 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 305 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 14, 76 |
| Conread position: | 353-788 |
| Cow position: | chr3:58947665-58947215 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 38 |
| Conread position: | 353-790 |
| Cow position: | chr3:18811704-18811260 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 40 |
| Conread position: | 371-627 |
| Cow position: | chr3:83233943-83234203 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 88 |
| Conread position: | 371-645 |
| Cow position: | chr3:49162880-49162604 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 9, 59 |
| Conread position: | 371-782 |
| Cow position: | chr3:54783729-54783305 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 292 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 9, 76 |
| Conread position: | 371-789 |
| Cow position: | chr3:54785942-54785523 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 23, 35 |
| Conread position: | 371-791 |
| Cow position: | chr3:5829443-5829872 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 118 |
| Conread position: | 374-502 |
| Cow position: | chr3:37969229-37969102 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 375-791 |
| Cow position: | chr3:3806508-3806112 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 83 |
| Conread position: | 376-521 |
| Cow position: | chr3:53713228-53713078 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 376-661 |
| Cow position: | chr3:49677966-49677679 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 187 |
| Conread position: | 376-729 |
| Cow position: | chr3:26822329-26822675 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 157 |
| Conread position: | 376-791 |
| Cow position: | chr3:472712-472290 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 200 |
| Conread position: | 376-791 |
| Cow position: | chr3:2634100-2633685 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 53 |
| Conread position: | 376-791 |
| Cow position: | chr3:2654282-2653864 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 53 |
| Conread position: | 376-791 |
| Cow position: | chr3:9716990-9716570 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 68 |
| Conread position: | 376-791 |
| Cow position: | chr3:31354085-31354500 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 200 |
| Conread position: | 376-791 |
| Cow position: | chr3:45869038-45869453 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 61 |
| Conread position: | 376-791 |
| Cow position: | chr3:57499366-57499762 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 229, 41 |
| Conread position: | 376-792 |
| Cow position: | chr3:206981-207404 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 266 |
| Conread position: | 376-792 |
| Cow position: | chr3:51940245-51940659 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 55 |
| Conread position: | 377-499 |
| Cow position: | chr3:40339933-40340055 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 377-528 |
| Cow position: | chr3:7481053-7481212 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 377-536 |
| Cow position: | chr3:29331098-29331262 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 377-578 |
| Cow position: | chr3:19939063-19938856 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 168 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 119, 75 |
| Conread position: | 377-614 |
| Cow position: | chr3:36864180-36864421 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 199 |
| Conread position: | 377-654 |
| Cow position: | chr3:68699794-68700070 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 54 |
| Conread position: | 377-654 |
| Cow position: | chr3:68873576-68873848 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 54 |
| Conread position: | 377-696 |
| Cow position: | chr3:14439582-14439909 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 199 |
| Conread position: | 377-781 |
| Cow position: | chr3:2917640-2917229 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 199 |
| Conread position: | 377-783 |
| Cow position: | chr3:5995518-5995932 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 199 |
| Conread position: | 377-783 |
| Cow position: | chr3:47179024-47179439 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 160 |
| Conread position: | 377-783 |
| Cow position: | chr3:49613798-49614212 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 199 |
| Conread position: | 377-790 |
| Cow position: | chr3:18542229-18542650 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 199 |
| Conread position: | 377-790 |
| Cow position: | chr3:21182508-21182927 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 75 |
| Conread position: | 377-790 |
| Cow position: | chr3:42432410-42431993 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 199 |
| Conread position: | 377-790 |
| Cow position: | chr3:57484551-57484966 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 85 |
| Conread position: | 377-791 |
| Cow position: | chr3:3523200-3522771 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 199 |
| Conread position: | 377-791 |
| Cow position: | chr3:6782563-6782144 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 199 |
| Conread position: | 377-791 |
| Cow position: | chr3:7158554-7158974 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 149 |
| Conread position: | 377-791 |
| Cow position: | chr3:7168971-7168552 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 11 |
| Conread position: | 377-791 |
| Cow position: | chr3:18859593-18859176 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 44 |
| Conread position: | 377-791 |
| Cow position: | chr3:22336067-22335649 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 178 |
| Conread position: | 377-791 |
| Cow position: | chr3:24314648-24314235 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 200 |
| Conread position: | 377-791 |
| Cow position: | chr3:36117842-36117432 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 120 |
| Conread position: | 377-791 |
| Cow position: | chr3:41211558-41211981 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 199 |
| Conread position: | 377-791 |
| Cow position: | chr3:45032920-45032498 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 199 |
| Conread position: | 377-791 |
| Cow position: | chr3:46861124-46861541 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 199 |
| Conread position: | 377-791 |
| Cow position: | chr3:56321494-56321074 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 198 |
| Conread position: | 377-791 |
| Cow position: | chr3:64027907-64028329 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 160 |
| Conread position: | 377-791 |
| Cow position: | chr3:66119834-66119413 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 199 |
| Conread position: | 377-791 |
| Cow position: | chr3:66890784-66891205 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 148 |
| Conread position: | 377-791 |
| Cow position: | chr3:77474941-77474517 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 198 |
| Conread position: | 378-667 |
| Cow position: | chr3:32617743-32618033 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 123, 60 |
| Conread position: | 378-782 |
| Cow position: | chr3:18728962-18729367 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 263 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 91, 199 |
| Conread position: | 378-788 |
| Cow position: | chr3:31897799-31898212 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 198 |
| Conread position: | 378-790 |
| Cow position: | chr3:21305005-21305408 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 273 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 123, 10 |
| Conread position: | 378-790 |
| Cow position: | chr3:56340249-56340666 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 198 |
| Conread position: | 378-791 |
| Cow position: | chr3:64650804-64650388 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 199 |
| Conread position: | 379-791 |
| Cow position: | chr3:19878835-19878419 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 197 |
| Conread position: | 380-791 |
| Cow position: | chr3:55229525-55229937 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 197 |
| Conread position: | 381-772 |
| Cow position: | chr3:32622861-32623247 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 77 |
| Conread position: | 383-676 |
| Cow position: | chr3:45895385-45895680 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 193 |
| Conread position: | 383-684 |
| Cow position: | chr3:45974670-45974368 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 193 |
| Conread position: | 383-782 |
| Cow position: | chr3:2710789-2711195 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 135 |
| Conread position: | 383-782 |
| Cow position: | chr3:42579794-42580200 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 193 |
| Conread position: | 383-790 |
| Cow position: | chr3:10239822-10239406 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 193 |
| Conread position: | 383-790 |
| Cow position: | chr3:18463420-18463828 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 81 |
| Conread position: | 384-661 |
| Cow position: | chr3:40157334-40157613 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 153 |
| Conread position: | 388-791 |
| Cow position: | chr3:70083486-70083889 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 37 |
| Conread position: | 389-790 |
| Cow position: | chr3:5883706-5883298 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 192 |
| Conread position: | 390-790 |
| Cow position: | chr3:19944216-19943822 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 115 |
| Conread position: | 396-687 |
| Cow position: | chr3:13518134-13518421 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 92 |
| Conread position: | 400-790 |
| Cow position: | chr3:50915462-50915063 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 178 |
| Conread position: | 405-790 |
| Cow position: | chr3:18356737-18357128 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 8 |
| Conread position: | 409-790 |
| Cow position: | chr3:23291256-23291647 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 154 |
| Conread position: | 409-791 |
| Cow position: | chr3:15988880-15989279 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 177 |
| Conread position: | 421-792 |
| Cow position: | chr3:5047049-5047428 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 155 |
| Conread position: | 435-791 |
| Cow position: | chr3:32145971-32146334 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 8 |
| Conread position: | 437-791 |
| Cow position: | chr3:17828530-17828893 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 141 |
| Conread position: | 443-791 |
| Cow position: | chr3:46677798-46678156 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 19, 136 |
| Conread position: | 447-790 |
| Cow position: | chr3:38866504-38866159 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 247 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 41, 129 |
| Conread position: | 451-784 |
| Cow position: | chr3:54864594-54864934 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 240 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 45, 121 |
| Conread position: | 452-791 |
| Cow position: | chr3:57856841-57856493 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 457-790 |
| Cow position: | chr3:43039607-43039935 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 40, 106 |
| Conread position: | 493-791 |
| Cow position: | chr3:37969137-37968837 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 119, 78 |
| Conread position: | 497-791 |
| Cow position: | chr3:21945355-21945648 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 70, 23 |
| Conread position: | 523-791 |
| Cow position: | chr3:14634084-14634355 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 204 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 46, 61 |
| Conread position: | 549-791 |
| Cow position: | chr3:63005144-63005392 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 64, 24 |
| Conread position: | 579-791 |
| Cow position: | chr3:72705171-72704954 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 55 |
Show alignments to all cow chromosomes.