Cow genome map
| Conread name: | Ss1.1-Lym1-jns97_C07.f.5 |
| Conread position: | 31-152 |
| Cow position: | chr5:61272485-61272605 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 114, 93 |
| Conread position: | 32-303 |
| Cow position: | chr5:41961869-41962121 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 256, 46 |
| Conread position: | 126-373 |
| Cow position: | chr5:61272529-61272772 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 121 |
| Conread position: | 151-507 |
| Cow position: | chr5:40053749-40053408 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 92 |
| Conread position: | 154-791 |
| Cow position: | chr5:46660021-46659387 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 33 |
| Conread position: | 179-792 |
| Cow position: | chr5:49593174-49593802 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 148 |
| Conread position: | 278-500 |
| Cow position: | chr5:27058939-27059169 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 181 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 67, 49 |
| Conread position: | 278-500 |
| Cow position: | chr5:27059842-27060072 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 181 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 67, 49 |
| Conread position: | 278-630 |
| Cow position: | chr5:49129401-49129035 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 70, 49 |
| Conread position: | 278-666 |
| Cow position: | chr5:23755453-23755836 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 216, 28 |
| Conread position: | 278-676 |
| Cow position: | chr5:39247228-39247606 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 49 |
| Conread position: | 284-685 |
| Cow position: | chr5:46630273-46630679 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 61 |
| Conread position: | 285-676 |
| Cow position: | chr5:25000475-25000869 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 46 |
| Conread position: | 285-783 |
| Cow position: | chr5:56857545-56858033 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 333 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 60, 45 |
| Conread position: | 286-634 |
| Cow position: | chr5:27489422-27489064 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 79 |
| Conread position: | 286-749 |
| Cow position: | chr5:52434141-52433674 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 140 |
| Conread position: | 288-749 |
| Cow position: | chr5:51163075-51162612 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 324 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 10, 184 |
| Conread position: | 290-518 |
| Cow position: | chr5:23228396-23228163 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 19 |
| Conread position: | 290-534 |
| Cow position: | chr5:27682568-27682828 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 85, 41 |
| Conread position: | 297-791 |
| Cow position: | chr5:61019700-61020193 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 336 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 51, 36 |
| Conread position: | 297-792 |
| Cow position: | chr5:26068565-26069059 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 69 |
| Conread position: | 298-791 |
| Cow position: | chr5:41529428-41529916 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 32 |
| Conread position: | 303-781 |
| Cow position: | chr5:58334443-58334920 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 301 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 34, 102 |
| Conread position: | 308-791 |
| Cow position: | chr5:28031624-28031140 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 43 |
| Conread position: | 334-790 |
| Cow position: | chr5:10918915-10918454 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 6 |
| Conread position: | 334-791 |
| Cow position: | chr5:45700385-45699940 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 341-535 |
| Cow position: | chr5:54792522-54792720 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 341-749 |
| Cow position: | chr5:55628099-55627689 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 341-782 |
| Cow position: | chr5:7273941-7273525 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 300 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 341-783 |
| Cow position: | chr5:2914561-2914114 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 341-790 |
| Cow position: | chr5:415610-416066 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 341-790 |
| Cow position: | chr5:4069100-4068647 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 341-790 |
| Cow position: | chr5:24098762-24098305 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 341-790 |
| Cow position: | chr5:30579435-30578979 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 22 |
| Conread position: | 341-790 |
| Cow position: | chr5:37732459-37732002 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 22 |
| Conread position: | 341-790 |
| Cow position: | chr5:48808602-48809059 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 341-790 |
| Cow position: | chr5:57482433-57482890 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 345-791 |
| Cow position: | chr5:14380272-14379818 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 73 |
| Conread position: | 350-782 |
| Cow position: | chr5:46738479-46738920 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 227 |
| Conread position: | 351-467 |
| Cow position: | chr5:52805540-52805426 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 351-563 |
| Cow position: | chr5:27570213-27570000 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 169 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 145, 12 |
| Conread position: | 351-666 |
| Cow position: | chr5:20971944-20972246 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 12 |
| Conread position: | 351-791 |
| Cow position: | chr5:39164698-39165142 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 12 |
| Conread position: | 351-791 |
| Cow position: | chr5:41962127-41962579 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 232 |
| Conread position: | 352-783 |
| Cow position: | chr5:28007291-28006869 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 11 |
| Conread position: | 353-658 |
| Cow position: | chr5:57977363-57977052 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 135 |
| Conread position: | 353-790 |
| Cow position: | chr5:32673633-32674085 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 231 |
| Conread position: | 371-681 |
| Cow position: | chr5:28023237-28022926 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 125, 101 |
| Conread position: | 371-687 |
| Cow position: | chr5:26054834-26054524 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 12, 68 |
| Conread position: | 374-670 |
| Cow position: | chr5:29435887-29436188 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 131, 8 |
| Conread position: | 375-783 |
| Cow position: | chr5:26769884-26769474 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 108 |
| Conread position: | 376-494 |
| Cow position: | chr5:6612090-6611972 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 376-500 |
| Cow position: | chr5:25206605-25206734 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 376-600 |
| Cow position: | chr5:4385325-4385108 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 117, 58 |
| Conread position: | 376-600 |
| Cow position: | chr5:12643864-12644087 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 123, 20 |
| Conread position: | 376-687 |
| Cow position: | chr5:9686348-9686669 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 201 |
| Conread position: | 376-788 |
| Cow position: | chr5:27651903-27652319 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 201 |
| Conread position: | 376-790 |
| Cow position: | chr5:32945953-32945537 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 200 |
| Conread position: | 376-791 |
| Cow position: | chr5:27909193-27909615 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 200 |
| Conread position: | 376-791 |
| Cow position: | chr5:29009432-29009015 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 65 |
| Conread position: | 376-791 |
| Cow position: | chr5:32733173-32733589 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 200 |
| Conread position: | 376-791 |
| Cow position: | chr5:41550847-41551269 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 201 |
| Conread position: | 376-791 |
| Cow position: | chr5:49182348-49181929 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 200 |
| Conread position: | 376-791 |
| Cow position: | chr5:59482332-59481910 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 99 |
| Conread position: | 377-472 |
| Cow position: | chr5:56144943-56145038 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 377-473 |
| Cow position: | chr5:35299931-35299835 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 377-476 |
| Cow position: | chr5:4089149-4089050 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 377-486 |
| Cow position: | chr5:10482926-10482817 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 377-492 |
| Cow position: | chr5:18122390-18122505 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 377-495 |
| Cow position: | chr5:18666072-18665954 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 377-536 |
| Cow position: | chr5:9043116-9042952 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 377-552 |
| Cow position: | chr5:10843341-10843521 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 377-659 |
| Cow position: | chr5:73489483-73489769 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 116, 199 |
| Conread position: | 377-713 |
| Cow position: | chr5:49518736-49518393 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 157 |
| Conread position: | 377-748 |
| Cow position: | chr5:10776186-10776566 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 199 |
| Conread position: | 377-790 |
| Cow position: | chr5:34696681-34696241 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 273 |
| Conread position: | 377-790 |
| Cow position: | chr5:46644765-46644357 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 199 |
| Conread position: | 377-790 |
| Cow position: | chr5:49119203-49119625 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 206 |
| Conread position: | 377-791 |
| Cow position: | chr5:2531349-2530926 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 199 |
| Conread position: | 377-791 |
| Cow position: | chr5:4019120-4019543 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 199 |
| Conread position: | 377-791 |
| Cow position: | chr5:6588942-6589366 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 200 |
| Conread position: | 377-791 |
| Cow position: | chr5:24576993-24576569 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 199 |
| Conread position: | 377-791 |
| Cow position: | chr5:26079140-26079563 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 199 |
| Conread position: | 377-791 |
| Cow position: | chr5:29042589-29042167 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 151 |
| Conread position: | 377-791 |
| Cow position: | chr5:31706652-31706230 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 159 |
| Conread position: | 377-791 |
| Cow position: | chr5:32772560-32772137 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 199 |
| Conread position: | 377-791 |
| Cow position: | chr5:34203013-34202602 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 177 |
| Conread position: | 377-791 |
| Cow position: | chr5:44459561-44459138 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 199 |
| Conread position: | 377-791 |
| Cow position: | chr5:45182025-45182454 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 199 |
| Conread position: | 377-791 |
| Cow position: | chr5:46664081-46663654 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 199 |
| Conread position: | 377-791 |
| Cow position: | chr5:46776158-46775744 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 263 |
| Conread position: | 377-791 |
| Cow position: | chr5:47831035-47831449 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 62 |
| Conread position: | 377-791 |
| Cow position: | chr5:48468201-48468621 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 199 |
| Conread position: | 377-791 |
| Cow position: | chr5:58196080-58195658 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 199 |
| Conread position: | 377-791 |
| Cow position: | chr5:59060696-59060276 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 167 |
| Conread position: | 378-535 |
| Cow position: | chr5:23960238-23960400 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 378-662 |
| Cow position: | chr5:27001684-27001400 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 111, 51 |
| Conread position: | 378-790 |
| Cow position: | chr5:2430055-2430476 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 198 |
| Conread position: | 378-791 |
| Cow position: | chr5:54932141-54932562 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 198 |
| Conread position: | 381-685 |
| Cow position: | chr5:24108521-24108825 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 120, 51 |
| Conread position: | 383-572 |
| Cow position: | chr5:76123509-76123701 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 383-790 |
| Cow position: | chr5:3785857-3785465 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 284 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 112, 69 |
| Conread position: | 383-790 |
| Cow position: | chr5:64781946-64782360 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 200 |
| Conread position: | 384-792 |
| Cow position: | chr5:3964526-3964125 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 47 |
| Conread position: | 388-791 |
| Cow position: | chr5:24330341-24329954 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 85 |
| Conread position: | 388-791 |
| Cow position: | chr5:26089765-26090170 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 54 |
| Conread position: | 392-784 |
| Cow position: | chr5:31101548-31101933 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 405-790 |
| Cow position: | chr5:3504200-3504590 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 171 |
| Conread position: | 406-791 |
| Cow position: | chr5:61273138-61273524 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 133 |
| Conread position: | 409-601 |
| Cow position: | chr5:17773994-17774190 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 87, 167 |
| Conread position: | 409-770 |
| Cow position: | chr5:6158152-6158518 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 249 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 92, 43 |
| Conread position: | 412-790 |
| Cow position: | chr5:1341755-1342137 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 50 |
| Conread position: | 417-661 |
| Cow position: | chr5:5786569-5786808 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 79, 159 |
| Conread position: | 447-769 |
| Cow position: | chr5:58819626-58819957 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 131 |
| Conread position: | 452-720 |
| Cow position: | chr5:18654048-18653774 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 49, 124 |
| Conread position: | 457-753 |
| Cow position: | chr5:5317759-5318063 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 40, 119 |
| Conread position: | 465-791 |
| Cow position: | chr5:18665951-18665617 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 236 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 11, 112 |
| Conread position: | 497-688 |
| Cow position: | chr5:52805319-52805125 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 115, 74 |
| Conread position: | 497-791 |
| Cow position: | chr5:25206787-25207086 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 109, 74 |
| Conread position: | 498-791 |
| Cow position: | chr5:4088757-4088460 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 215 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 110, 73 |
| Conread position: | 513-783 |
| Cow position: | chr5:57366085-57366358 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 54, 70 |
| Conread position: | 528-791 |
| Cow position: | chr5:53715176-53714909 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 85, 45 |
| Conread position: | 534-790 |
| Cow position: | chr5:46005460-46005727 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 39 |
| Conread position: | 560-783 |
| Cow position: | chr5:10843984-10844211 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 13 |
Show alignments to all cow chromosomes.