Cow genome map

Conread name: Ss1.1-Lym2-sn01_H04.f.5

Conread position: 1-189
Cow position: chr1:23839013-23839202 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 153
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 154, 17

Conread position: 1-192
Cow position: chr1:41277459-41277649 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 151, 19

Conread position: 1-194
Cow position: chr1:5420107-5420297 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 149, 16

Conread position: 1-194
Cow position: chr1:7416195-7415999 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 151, 32

Conread position: 1-194
Cow position: chr1:38687931-38687738 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 152, 40

Conread position: 1-197
Cow position: chr1:80701531-80701727 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 51

Conread position: 1-200
Cow position: chr1:88327766-88327975 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 184

Conread position: 1-225
Cow position: chr1:66871092-66871319 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 39

Conread position: 2-148
Cow position: chr1:99262563-99262419 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 133, 39

Conread position: 2-176
Cow position: chr1:82864505-82864326 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 134, 16

Conread position: 2-199
Cow position: chr1:41736155-41736357 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 138
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 2-200
Cow position: chr1:71792638-71792440 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 151, 34

Conread position: 2-206
Cow position: chr1:81925476-81925683 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 34

Conread position: 3-176
Cow position: chr1:43562636-43562806 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 128, 14

Conread position: 4-148
Cow position: chr1:89174071-89174213 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 17

Conread position: 4-178
Cow position: chr1:72114842-72114666 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 149, 14

Conread position: 5-152
Cow position: chr1:33716666-33716521 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 5-176
Cow position: chr1:24909875-24910046 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 129, 36

Conread position: 5-185
Cow position: chr1:57096503-57096320 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 148, 27

Conread position: 5-190
Cow position: chr1:20147129-20146945 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 145, 27

Conread position: 5-199
Cow position: chr1:93413151-93413350 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 17

Conread position: 5-200
Cow position: chr1:58196748-58196943 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 152, 35

Conread position: 5-200
Cow position: chr1:86705842-86705647 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 147, 30

Conread position: 6-152
Cow position: chr1:85353199-85353056 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 6-169
Cow position: chr1:99674631-99674797 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 144, 30

Conread position: 6-171
Cow position: chr1:61331258-61331426 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 144, 30

Conread position: 6-178
Cow position: chr1:69963605-69963780 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 129, 35

Conread position: 6-182
Cow position: chr1:6196576-6196754 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 144, 13

Conread position: 6-194
Cow position: chr1:24440356-24440548 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 144, 29

Conread position: 6-194
Cow position: chr1:81356590-81356780 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 147, 13

Conread position: 6-200
Cow position: chr1:3012113-3012305 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 180, 26

Conread position: 6-200
Cow position: chr1:77461834-77461644 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 6-200
Cow position: chr1:79632850-79633044 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 34

Conread position: 6-204
Cow position: chr1:35732111-35732310 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 9, 31

Conread position: 6-209
Cow position: chr1:79843913-79843709 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 129, 13

Conread position: 6-211
Cow position: chr1:71435145-71434933 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 9, 103

Conread position: 6-223
Cow position: chr1:42080148-42079931 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 44, 30

Conread position: 6-234
Cow position: chr1:40964462-40964698 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 147, 30

Conread position: 7-151
Cow position: chr1:36008271-36008129 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 7-171
Cow position: chr1:57577197-57577364 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 146, 29

Conread position: 7-171
Cow position: chr1:71123935-71124102 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 143, 29

Conread position: 7-171
Cow position: chr1:72963391-72963558 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 143, 26

Conread position: 7-178
Cow position: chr1:51980675-51980501 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 146, 35

Conread position: 7-194
Cow position: chr1:8828724-8828534 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 145, 25

Conread position: 7-194
Cow position: chr1:76873581-76873392 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 146, 29

Conread position: 7-195
Cow position: chr1:56720797-56720988 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 145, 26

Conread position: 7-200
Cow position: chr1:11895808-11896000 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 149, 67

Conread position: 7-200
Cow position: chr1:28811538-28811731 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 145, 25

Conread position: 7-221
Cow position: chr1:15615053-15615269 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 147, 36

Conread position: 8-185
Cow position: chr1:7162099-7162285 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 8-185
Cow position: chr1:93858232-93858045 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 8-195
Cow position: chr1:72462597-72462405 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 137, 26

Conread position: 8-198
Cow position: chr1:79981244-79981431 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 13-224
Cow position: chr1:85295789-85295578 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 118, 34

Conread position: 14-188
Cow position: chr1:56772461-56772640 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 139, 22

Conread position: 14-194
Cow position: chr1:101569553-101569740 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 97, 20

Conread position: 17-177
Cow position: chr1:13250853-13251014 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 136, 15

Conread position: 17-185
Cow position: chr1:70068717-70068888 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 135, 19

Conread position: 17-190
Cow position: chr1:54163407-54163582 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 120, 19

Conread position: 17-194
Cow position: chr1:52378666-52378486 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 135, 15

Conread position: 18-148
Cow position: chr1:2752114-2751986 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 18-151
Cow position: chr1:8345714-8345845 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 18-151
Cow position: chr1:8470470-8470601 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 18-151
Cow position: chr1:12035457-12035326 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 18-151
Cow position: chr1:12608058-12608189 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 18-151
Cow position: chr1:15148951-15149082 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 18-151
Cow position: chr1:17247970-17248101 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 18-151
Cow position: chr1:28770211-28770342 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 18-151
Cow position: chr1:33854959-33854828 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 18-151
Cow position: chr1:46885523-46885392 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 18-151
Cow position: chr1:48600805-48600674 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 18-151
Cow position: chr1:53564132-53564001 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 18-151
Cow position: chr1:55273351-55273482 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 18-151
Cow position: chr1:75826216-75826085 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 18-151
Cow position: chr1:84284396-84284265 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 18-151
Cow position: chr1:89792863-89792994 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 18-156
Cow position: chr1:7324730-7324594 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 18-165
Cow position: chr1:9526259-9526109 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 134, 18

Conread position: 18-165
Cow position: chr1:62597530-62597680 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 132, 18

Conread position: 18-169
Cow position: chr1:8517377-8517531 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 132, 18

Conread position: 18-169
Cow position: chr1:44556972-44557126 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 132, 18

Conread position: 18-169
Cow position: chr1:66368700-66368854 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 132, 18

Conread position: 18-171
Cow position: chr1:2990176-2990020 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 132, 18

Conread position: 18-171
Cow position: chr1:3931947-3932103 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 135, 18

Conread position: 18-171
Cow position: chr1:3969593-3969749 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 135, 15

Conread position: 18-171
Cow position: chr1:9309183-9309027 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 132, 15

Conread position: 18-171
Cow position: chr1:10936976-10936820 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 132, 18

Conread position: 18-171
Cow position: chr1:11665848-11666004 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 134, 21

Conread position: 18-171
Cow position: chr1:12374611-12374767 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 132, 18

Conread position: 18-171
Cow position: chr1:16820299-16820143 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 132, 15

Conread position: 18-171
Cow position: chr1:17187547-17187703 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 132, 15

Conread position: 18-171
Cow position: chr1:18699123-18698967 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 132, 15

Conread position: 18-171
Cow position: chr1:19157764-19157920 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 132, 18

Conread position: 18-171
Cow position: chr1:26536493-26536649 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 132, 18

Conread position: 18-171
Cow position: chr1:26588643-26588487 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 132, 15

Conread position: 18-171
Cow position: chr1:30312122-30311966 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 132, 15

Conread position: 18-171
Cow position: chr1:33364704-33364548 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 132, 15

Conread position: 18-171
Cow position: chr1:33656537-33656381 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 132, 15

Conread position: 18-171
Cow position: chr1:40681037-40681194 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 92, 18

Conread position: 18-171
Cow position: chr1:43225296-43225452 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 132, 15

Conread position: 18-171
Cow position: chr1:46930261-46930417 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 132, 15

Conread position: 18-171
Cow position: chr1:47078489-47078643 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 134, 15

Conread position: 18-171
Cow position: chr1:48735627-48735471 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 132, 15

Conread position: 18-171
Cow position: chr1:49268573-49268417 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 132, 15

Conread position: 18-171
Cow position: chr1:56666793-56666637 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 132, 18

Conread position: 18-171
Cow position: chr1:61097193-61097037 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 132, 18

Conread position: 18-171
Cow position: chr1:61493492-61493336 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 127, 18

Conread position: 18-171
Cow position: chr1:63340780-63340935 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 134, 15

Conread position: 18-171
Cow position: chr1:67717640-67717796 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 135, 18

Conread position: 18-171
Cow position: chr1:68145278-68145434 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 132, 18

Conread position: 18-171
Cow position: chr1:68480994-68481150 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 132, 15

Conread position: 18-171
Cow position: chr1:69503681-69503837 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 135, 18

Conread position: 18-171
Cow position: chr1:72589671-72589827 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 132, 18

Conread position: 18-171
Cow position: chr1:72808272-72808116 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 135, 18

Conread position: 18-171
Cow position: chr1:73564785-73564941 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 132, 15

Conread position: 18-171
Cow position: chr1:77925174-77925018 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 135, 18

Conread position: 18-171
Cow position: chr1:78234994-78235150 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 134, 18

Conread position: 18-171
Cow position: chr1:78921316-78921476 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 103, 22

Conread position: 18-171
Cow position: chr1:80564384-80564540 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 135, 18

Conread position: 18-171
Cow position: chr1:82568101-82567949 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 132, 15

Conread position: 18-171
Cow position: chr1:86496982-86496826 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 132, 15

Conread position: 18-178
Cow position: chr1:31535544-31535382 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 134, 22

Conread position: 18-178
Cow position: chr1:54933620-54933457 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 132, 22

Conread position: 18-178
Cow position: chr1:102815166-102815003 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 134, 22

Conread position: 18-185
Cow position: chr1:1383180-1383350 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 134, 15

Conread position: 18-185
Cow position: chr1:6900839-6900669 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 132, 18

Conread position: 18-185
Cow position: chr1:15418143-15418313 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 132, 18

Conread position: 18-185
Cow position: chr1:19056561-19056391 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 133, 15

Conread position: 18-185
Cow position: chr1:20846320-20846490 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 132, 18

Conread position: 18-185
Cow position: chr1:20848838-20849008 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 132, 18

Conread position: 18-185
Cow position: chr1:21420965-21421135 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 132, 15

Conread position: 18-185
Cow position: chr1:23861016-23861186 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 132, 18

Conread position: 18-185
Cow position: chr1:28714728-28714562 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 132, 15

Conread position: 18-185
Cow position: chr1:40351548-40351378 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 132, 18

Conread position: 18-185
Cow position: chr1:54471721-54471891 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 132, 15

Conread position: 18-185
Cow position: chr1:56205121-56205291 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 132, 18

Conread position: 18-185
Cow position: chr1:66145393-66145223 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 132, 18

Conread position: 18-185
Cow position: chr1:75403587-75403417 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 134, 18

Conread position: 18-185
Cow position: chr1:76486114-76486284 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 131, 18

Conread position: 18-185
Cow position: chr1:78558120-78557950 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 132, 18

Conread position: 18-185
Cow position: chr1:82479676-82479506 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 132, 15

Conread position: 18-185
Cow position: chr1:83170135-83169965 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 134, 18

Conread position: 18-185
Cow position: chr1:85578165-85578335 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 134, 18

Conread position: 18-185
Cow position: chr1:91673924-91673754 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 134, 15

Conread position: 18-186
Cow position: chr1:20527852-20527681 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 134, 18

Conread position: 18-187
Cow position: chr1:72766343-72766518 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 134, 0

Conread position: 18-187
Cow position: chr1:89234340-89234512 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 127, 18

Conread position: 18-194
Cow position: chr1:31708300-31708121 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 134, 22

Conread position: 18-194
Cow position: chr1:59483174-59483349 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 134, 22

Conread position: 18-194
Cow position: chr1:98535307-98535131 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 16, 64

Conread position: 18-197
Cow position: chr1:59626350-59626171 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 116, 15

Conread position: 18-200
Cow position: chr1:19235804-19235986 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 134, 18

Conread position: 18-200
Cow position: chr1:60931211-60931394 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 112, 29

Conread position: 18-200
Cow position: chr1:89492548-89492726 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 134, 17

Conread position: 18-218
Cow position: chr1:95593033-95593236 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 132, 18

Conread position: 18-227
Cow position: chr1:60342667-60342460 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 134, 15

Conread position: 18-231
Cow position: chr1:79554188-79553967 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 132, 15

Conread position: 18-267
Cow position: chr1:70534756-70535002 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 135, 17

Conread position: 19-244
Cow position: chr1:36528856-36528627 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 17

Conread position: 21-187
Cow position: chr1:55780558-55780389 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 129, 15

Conread position: 21-200
Cow position: chr1:17938063-17938243 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 131, 19

Conread position: 25-185
Cow position: chr1:56190731-56190896 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 128, 0

Conread position: 26-195
Cow position: chr1:93962207-93962382 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 13, 22

Conread position: 30-199
Cow position: chr1:71045189-71045012 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 31-178
Cow position: chr1:57678699-57678853 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 31-185
Cow position: chr1:58340598-58340437 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 31-200
Cow position: chr1:13404701-13404880 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 32-178
Cow position: chr1:80967748-80967598 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 120, 12

Conread position: 32-185
Cow position: chr1:79334307-79334464 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 120, 6

Conread position: 32-200
Cow position: chr1:79357072-79357244 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 140

Conread position: 33-188
Cow position: chr1:31351953-31352113 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 120, 0

Conread position: 33-192
Cow position: chr1:23117532-23117692 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 117, 5

Conread position: 33-192
Cow position: chr1:57246777-57246614 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 5

Conread position: 33-200
Cow position: chr1:89742583-89742753 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 7

Conread position: 34-221
Cow position: chr1:101981836-101982026 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 69

Conread position: 35-178
Cow position: chr1:57759587-57759439 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 35-185
Cow position: chr1:72987135-72986980 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 8, 149

Conread position: 35-186
Cow position: chr1:10726303-10726145 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 35-199
Cow position: chr1:44991296-44991462 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 117, 137

Conread position: 36-151
Cow position: chr1:42202008-42201894 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 36-170
Cow position: chr1:71559073-71559212 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 36-171
Cow position: chr1:21079763-21079903 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 36-171
Cow position: chr1:34392183-34392323 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 36-171
Cow position: chr1:44819128-44819268 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 36-171
Cow position: chr1:48036133-48036273 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 36-171
Cow position: chr1:52381121-52380981 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 36-171
Cow position: chr1:62530107-62530247 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 36-171
Cow position: chr1:74513466-74513606 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 36-171
Cow position: chr1:77554326-77554466 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 36-171
Cow position: chr1:91105715-91105575 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 36-174
Cow position: chr1:81867734-81867878 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 36-176
Cow position: chr1:39234830-39234975 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 116, 0

Conread position: 36-178
Cow position: chr1:33040495-33040348 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 116, 0

Conread position: 36-185
Cow position: chr1:14240390-14240544 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 36-185
Cow position: chr1:31645952-31646105 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 116, 142

Conread position: 36-185
Cow position: chr1:39889753-39889602 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 36-185
Cow position: chr1:77748419-77748266 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 116, 28

Conread position: 36-185
Cow position: chr1:86372361-86372516 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 36-185
Cow position: chr1:89432080-89431926 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 36-186
Cow position: chr1:12283038-12282886 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 122, 0

Conread position: 36-191
Cow position: chr1:81309038-81308883 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 36-194
Cow position: chr1:40603701-40603543 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 99, 116

Conread position: 36-194
Cow position: chr1:67831458-67831622 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 36-200
Cow position: chr1:83059965-83060131 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 116, 149

Conread position: 36-230
Cow position: chr1:19192075-19191876 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 118, 153

Conread position: 36-290
Cow position: chr1:31969687-31969943 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 118, 48

Conread position: 37-169
Cow position: chr1:76878706-76878570 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 115, 64

Conread position: 37-170
Cow position: chr1:61281686-61281548 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 37-171
Cow position: chr1:4207823-4207962 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 37-171
Cow position: chr1:34533917-34533778 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 37-171
Cow position: chr1:95457027-95456888 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 37-171
Cow position: chr1:98353719-98353858 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 37-185
Cow position: chr1:1028043-1027897 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 116, 0

Conread position: 37-185
Cow position: chr1:40058769-40058616 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 37-185
Cow position: chr1:52941681-52941528 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 37-185
Cow position: chr1:57506467-57506314 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 37-185
Cow position: chr1:71795208-71795056 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 113, 68

Conread position: 37-188
Cow position: chr1:52979341-52979185 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 37-191
Cow position: chr1:8744821-8744975 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 37-213
Cow position: chr1:37435342-37435525 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 37-221
Cow position: chr1:64717217-64717409 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 37-222
Cow position: chr1:67127201-67127391 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 62, 119

Conread position: 37-223
Cow position: chr1:2600028-2600219 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 113, 43

Conread position: 38-194
Cow position: chr1:25052914-25053073 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 114, 82

Conread position: 38-218
Cow position: chr1:23634488-23634669 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 96, 147

Conread position: 40-171
Cow position: chr1:18962076-18962212 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 40-171
Cow position: chr1:84449298-84449162 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 41-171
Cow position: chr1:46612625-46612760 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 41-171
Cow position: chr1:69770488-69770355 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 33

Conread position: 41-171
Cow position: chr1:85806960-85807095 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 41-185
Cow position: chr1:30281154-30281302 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 111, 52

Conread position: 41-185
Cow position: chr1:68610106-68610255 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 41-185
Cow position: chr1:89089865-89090014 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 41-186
Cow position: chr1:51884273-51884123 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 111, 0

Conread position: 41-194
Cow position: chr1:3440634-3440476 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 41-194
Cow position: chr1:33900211-33900053 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 111, 0

Conread position: 41-194
Cow position: chr1:91902691-91902533 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 41-196
Cow position: chr1:60280201-60280040 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 41-200
Cow position: chr1:9376707-9376868 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 111, 137

Conread position: 41-200
Cow position: chr1:17032923-17033084 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 109, 144

Conread position: 41-200
Cow position: chr1:67006546-67006389 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 109, 133

Conread position: 41-227
Cow position: chr1:83136607-83136420 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 111, 137

Conread position: 41-232
Cow position: chr1:87090702-87090507 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 113, 36

Conread position: 42-178
Cow position: chr1:98988756-98988897 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 42-182
Cow position: chr1:28876768-28876623 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 42-185
Cow position: chr1:3930669-3930817 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 42-185
Cow position: chr1:25178343-25178490 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 22

Conread position: 42-185
Cow position: chr1:29429275-29429127 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 42-185
Cow position: chr1:38479282-38479134 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 42-185
Cow position: chr1:57636283-57636135 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 42-185
Cow position: chr1:69406829-69406681 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 42-185
Cow position: chr1:88179531-88179382 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 42-187
Cow position: chr1:52355003-52355152 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 110, 66

Conread position: 42-191
Cow position: chr1:10034198-10034050 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 140, 0

Conread position: 42-194
Cow position: chr1:3263657-3263503 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 42-194
Cow position: chr1:5505609-5505452 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 42-194
Cow position: chr1:25553473-25553317 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 51

Conread position: 42-194
Cow position: chr1:67078156-67078313 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 42-194
Cow position: chr1:88677139-88676983 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 111, 66

Conread position: 42-194
Cow position: chr1:99917110-99916953 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 42-195
Cow position: chr1:88308054-88308211 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 109, 51

Conread position: 42-198
Cow position: chr1:86511573-86511411 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 42-200
Cow position: chr1:8602305-8602465 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 143

Conread position: 42-200
Cow position: chr1:89766861-89767020 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 111, 90

Conread position: 42-211
Cow position: chr1:68846054-68846227 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 108, 140

Conread position: 42-212
Cow position: chr1:30882985-30883159 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 103, 145

Conread position: 42-216
Cow position: chr1:66491248-66491069 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 111, 0

Conread position: 42-218
Cow position: chr1:54477472-54477296 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 108, 92

Conread position: 43-194
Cow position: chr1:57660267-57660114 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 110, 38

Conread position: 43-194
Cow position: chr1:81779338-81779182 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 43-195
Cow position: chr1:86574495-86574340 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 15

Conread position: 45-171
Cow position: chr1:24715575-24715444 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 45-185
Cow position: chr1:17435734-17435879 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 45-194
Cow position: chr1:26585889-26585735 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 46-200
Cow position: chr1:44229882-44229726 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 142

Conread position: 48-186
Cow position: chr1:25548697-25548556 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 102, 123

Conread position: 49-223
Cow position: chr1:87519101-87519279 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 52-194
Cow position: chr1:75895708-75895855 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 124

Conread position: 54-200
Cow position: chr1:29461985-29461836 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 96, 124

Show alignments to all cow chromosomes.