Cow genome map
| Conread name: | Ss1.1-Lym2-sn01_H04.f.5 |
| Conread position: | 2-133 |
| Cow position: | chr16:17868017-17868147 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 16, 40 |
| Conread position: | 2-188 |
| Cow position: | chr16:34019129-34019318 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 152, 34 |
| Conread position: | 2-197 |
| Cow position: | chr16:50519145-50518948 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 135, 26 |
| Conread position: | 2-198 |
| Cow position: | chr16:15470345-15470152 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 181, 33 |
| Conread position: | 2-200 |
| Cow position: | chr16:24229209-24229016 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 152, 26 |
| Conread position: | 2-211 |
| Cow position: | chr16:10570090-10569885 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 132, 34 |
| Conread position: | 2-240 |
| Cow position: | chr16:54214363-54214132 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 177, 37 |
| Conread position: | 4-199 |
| Cow position: | chr16:32496718-32496522 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 150, 32 |
| Conread position: | 5-151 |
| Cow position: | chr16:20234661-20234805 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 5-151 |
| Cow position: | chr16:24128139-24127995 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 5-182 |
| Cow position: | chr16:32742274-32742095 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 149, 36 |
| Conread position: | 5-194 |
| Cow position: | chr16:51042543-51042729 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 5-222 |
| Cow position: | chr16:33196817-33196599 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 148, 31 |
| Conread position: | 6-151 |
| Cow position: | chr16:24625107-24625249 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 6-152 |
| Cow position: | chr16:13555016-13555161 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 132, 29 |
| Conread position: | 6-185 |
| Cow position: | chr16:50190153-50190334 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 147, 29 |
| Conread position: | 6-188 |
| Cow position: | chr16:3597065-3597250 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 147, 37 |
| Conread position: | 6-194 |
| Cow position: | chr16:192970-193160 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 131, 35 |
| Conread position: | 6-194 |
| Cow position: | chr16:3338347-3338156 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 147, 30 |
| Conread position: | 6-194 |
| Cow position: | chr16:19062803-19062613 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 139, 26 |
| Conread position: | 6-194 |
| Cow position: | chr16:41034270-41034078 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 93, 26 |
| Conread position: | 6-231 |
| Cow position: | chr16:49169922-49170152 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 139, 13 |
| Conread position: | 7-152 |
| Cow position: | chr16:22843632-22843489 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 7-165 |
| Cow position: | chr16:2947394-2947555 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 143, 33 |
| Conread position: | 7-168 |
| Cow position: | chr16:2426135-2426299 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 145, 25 |
| Conread position: | 7-171 |
| Cow position: | chr16:2960647-2960480 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 146, 26 |
| Conread position: | 7-171 |
| Cow position: | chr16:23877442-23877275 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 143, 26 |
| Conread position: | 7-171 |
| Cow position: | chr16:29107176-29107343 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 143, 26 |
| Conread position: | 7-171 |
| Cow position: | chr16:34021884-34022052 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 146, 29 |
| Conread position: | 7-171 |
| Cow position: | chr16:39788036-39788203 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 145, 26 |
| Conread position: | 7-185 |
| Cow position: | chr16:3148073-3148252 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 147, 34 |
| Conread position: | 7-185 |
| Cow position: | chr16:18650616-18650797 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 145, 26 |
| Conread position: | 7-187 |
| Cow position: | chr16:840238-840054 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 145, 34 |
| Conread position: | 7-188 |
| Cow position: | chr16:4461360-4461545 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 145, 29 |
| Conread position: | 7-194 |
| Cow position: | chr16:7673409-7673600 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 145, 35 |
| Conread position: | 8-152 |
| Cow position: | chr16:51381626-51381768 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 8-200 |
| Cow position: | chr16:52892518-52892322 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 55, 28 |
| Conread position: | 8-215 |
| Cow position: | chr16:31122818-31123026 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 145, 11 |
| Conread position: | 9-185 |
| Cow position: | chr16:3820601-3820423 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 145, 32 |
| Conread position: | 11-185 |
| Cow position: | chr16:29379698-29379522 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 142, 12 |
| Conread position: | 14-194 |
| Cow position: | chr16:20124845-20124661 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 140, 22 |
| Conread position: | 14-208 |
| Cow position: | chr16:43794922-43795108 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 17-132 |
| Cow position: | chr16:42752305-42752192 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 17-190 |
| Cow position: | chr16:9226521-9226340 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 18-151 |
| Cow position: | chr16:8646814-8646683 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 18-151 |
| Cow position: | chr16:44050935-44051066 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 18-152 |
| Cow position: | chr16:54431316-54431448 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 18-169 |
| Cow position: | chr16:27064442-27064596 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 132, 15 |
| Conread position: | 18-171 |
| Cow position: | chr16:3012071-3011915 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 132, 18 |
| Conread position: | 18-171 |
| Cow position: | chr16:6677674-6677522 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 132, 15 |
| Conread position: | 18-171 |
| Cow position: | chr16:7385722-7385566 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 132, 15 |
| Conread position: | 18-171 |
| Cow position: | chr16:7718164-7718006 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 94, 15 |
| Conread position: | 18-171 |
| Cow position: | chr16:8883890-8883734 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 132, 15 |
| Conread position: | 18-171 |
| Cow position: | chr16:10812839-10812683 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 127, 18 |
| Conread position: | 18-171 |
| Cow position: | chr16:12485343-12485499 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 132, 18 |
| Conread position: | 18-171 |
| Cow position: | chr16:12651877-12651721 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 132, 15 |
| Conread position: | 18-171 |
| Cow position: | chr16:15424808-15424964 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 132, 15 |
| Conread position: | 18-171 |
| Cow position: | chr16:15754984-15755139 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 134, 15 |
| Conread position: | 18-171 |
| Cow position: | chr16:16942673-16942517 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 132, 18 |
| Conread position: | 18-171 |
| Cow position: | chr16:18975825-18975669 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 134, 15 |
| Conread position: | 18-171 |
| Cow position: | chr16:20502988-20502836 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 132, 15 |
| Conread position: | 18-171 |
| Cow position: | chr16:23772718-23772874 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 134, 15 |
| Conread position: | 18-171 |
| Cow position: | chr16:24752970-24753126 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 132, 18 |
| Conread position: | 18-171 |
| Cow position: | chr16:24987546-24987703 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 18-171 |
| Cow position: | chr16:25075550-25075394 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 134, 18 |
| Conread position: | 18-171 |
| Cow position: | chr16:25880272-25880117 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 132, 15 |
| Conread position: | 18-171 |
| Cow position: | chr16:26133219-26133375 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 132, 15 |
| Conread position: | 18-171 |
| Cow position: | chr16:27537971-27537815 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 132, 18 |
| Conread position: | 18-171 |
| Cow position: | chr16:44475400-44475556 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 132, 15 |
| Conread position: | 18-171 |
| Cow position: | chr16:49779993-49780149 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 135, 15 |
| Conread position: | 18-171 |
| Cow position: | chr16:52952283-52952439 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 132, 18 |
| Conread position: | 18-185 |
| Cow position: | chr16:15312238-15312068 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 132, 15 |
| Conread position: | 18-185 |
| Cow position: | chr16:18212238-18212408 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 134, 15 |
| Conread position: | 18-185 |
| Cow position: | chr16:19082003-19081833 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 134, 15 |
| Conread position: | 18-185 |
| Cow position: | chr16:20278797-20278627 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 132, 18 |
| Conread position: | 18-185 |
| Cow position: | chr16:24407869-24407699 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 132, 15 |
| Conread position: | 18-185 |
| Cow position: | chr16:24615118-24615288 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 132, 18 |
| Conread position: | 18-185 |
| Cow position: | chr16:25329340-25329510 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 134, 18 |
| Conread position: | 18-185 |
| Cow position: | chr16:49096921-49096751 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 132, 18 |
| Conread position: | 18-185 |
| Cow position: | chr16:56281842-56282011 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 132, 18 |
| Conread position: | 18-187 |
| Cow position: | chr16:45464963-45465135 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 132, 15 |
| Conread position: | 18-188 |
| Cow position: | chr16:27592867-27593040 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 135, 15 |
| Conread position: | 18-200 |
| Cow position: | chr16:13721631-13721814 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 136, 15 |
| Conread position: | 19-178 |
| Cow position: | chr16:10202978-10203140 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 133, 13 |
| Conread position: | 19-194 |
| Cow position: | chr16:1734692-1734517 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 133, 22 |
| Conread position: | 19-194 |
| Cow position: | chr16:31426010-31425837 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 134, 22 |
| Conread position: | 21-185 |
| Cow position: | chr16:24240446-24240613 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 131, 14 |
| Conread position: | 21-185 |
| Cow position: | chr16:54322456-54322623 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 131, 20 |
| Conread position: | 21-194 |
| Cow position: | chr16:21018512-21018337 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 130, 19 |
| Conread position: | 21-206 |
| Cow position: | chr16:16280998-16281184 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 17, 24 |
| Conread position: | 29-185 |
| Cow position: | chr16:8813157-8813318 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 31-187 |
| Cow position: | chr16:2962909-2963073 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 32-196 |
| Cow position: | chr16:13715821-13715987 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 33-194 |
| Cow position: | chr16:3769064-3769230 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 35-185 |
| Cow position: | chr16:41163834-41163988 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 117, 64 |
| Conread position: | 35-194 |
| Cow position: | chr16:52527172-52527009 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 117, 99 |
| Conread position: | 36-152 |
| Cow position: | chr16:29323051-29323168 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 36-170 |
| Cow position: | chr16:30801233-30801094 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 36-171 |
| Cow position: | chr16:7303698-7303557 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 36-178 |
| Cow position: | chr16:46555363-46555216 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 36-185 |
| Cow position: | chr16:23027656-23027505 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 36-185 |
| Cow position: | chr16:46385607-46385760 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 36-185 |
| Cow position: | chr16:49094157-49094311 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 36-191 |
| Cow position: | chr16:21453705-21453867 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 36-191 |
| Cow position: | chr16:47404321-47404166 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 36-194 |
| Cow position: | chr16:14040366-14040203 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 36-194 |
| Cow position: | chr16:16540338-16540175 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 36-194 |
| Cow position: | chr16:26627693-26627530 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 36-194 |
| Cow position: | chr16:37477920-37478083 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 36-194 |
| Cow position: | chr16:40293229-40293392 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 36-195 |
| Cow position: | chr16:32118518-32118356 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 99, 88 |
| Conread position: | 36-200 |
| Cow position: | chr16:7712557-7712391 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 117, 149 |
| Conread position: | 36-200 |
| Cow position: | chr16:15813023-15812857 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 116, 149 |
| Conread position: | 36-200 |
| Cow position: | chr16:23403754-23403588 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 52, 45 |
| Conread position: | 36-200 |
| Cow position: | chr16:37053124-37053291 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 99, 143 |
| Conread position: | 36-245 |
| Cow position: | chr16:30516486-30516690 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 37-171 |
| Cow position: | chr16:26658905-26658766 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 37-194 |
| Cow position: | chr16:14100788-14100626 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 37-200 |
| Cow position: | chr16:5345759-5345924 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 115, 141 |
| Conread position: | 37-210 |
| Cow position: | chr16:2223992-2224170 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 40-185 |
| Cow position: | chr16:23249018-23249168 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 40-185 |
| Cow position: | chr16:23654186-23654036 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 40-185 |
| Cow position: | chr16:28278465-28278612 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 40-185 |
| Cow position: | chr16:42211433-42211283 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 41-178 |
| Cow position: | chr16:16567033-16566891 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 41-185 |
| Cow position: | chr16:22798768-22798917 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 41-185 |
| Cow position: | chr16:42745548-42745697 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 41-194 |
| Cow position: | chr16:4756946-4756788 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 41-194 |
| Cow position: | chr16:24209462-24209620 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 41-198 |
| Cow position: | chr16:55786638-55786801 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 41-201 |
| Cow position: | chr16:10866692-10866531 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 113, 23 |
| Conread position: | 42-178 |
| Cow position: | chr16:15187993-15187854 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 111, 64 |
| Conread position: | 42-185 |
| Cow position: | chr16:5350573-5350721 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 42-185 |
| Cow position: | chr16:5488806-5488658 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 42-185 |
| Cow position: | chr16:23533065-23533213 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 42-187 |
| Cow position: | chr16:5435760-5435609 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 42-188 |
| Cow position: | chr16:11100391-11100541 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 24 |
| Conread position: | 42-190 |
| Cow position: | chr16:37454399-37454550 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 42-193 |
| Cow position: | chr16:10441173-10441017 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 42-194 |
| Cow position: | chr16:1563452-1563610 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 42-194 |
| Cow position: | chr16:2724289-2724446 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 42-194 |
| Cow position: | chr16:15979443-15979600 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 42-194 |
| Cow position: | chr16:31585568-31585724 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 42-194 |
| Cow position: | chr16:46101684-46101841 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 42-194 |
| Cow position: | chr16:51087717-51087561 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 108, 147 |
| Conread position: | 42-194 |
| Cow position: | chr16:51641182-51641025 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 42-195 |
| Cow position: | chr16:49742594-49742754 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 42-198 |
| Cow position: | chr16:7504368-7504206 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 42-200 |
| Cow position: | chr16:11632909-11633069 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 110, 143 |
| Conread position: | 42-200 |
| Cow position: | chr16:17142334-17142179 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 42-200 |
| Cow position: | chr16:41834800-41834641 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 111, 130 |
| Conread position: | 42-200 |
| Cow position: | chr16:43090161-43090322 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 111, 143 |
| Conread position: | 42-200 |
| Cow position: | chr16:49188336-49188485 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 42-218 |
| Cow position: | chr16:12535033-12535211 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 110, 138 |
| Conread position: | 42-228 |
| Cow position: | chr16:20734344-20734538 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 45-194 |
| Cow position: | chr16:15369923-15369769 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 49-200 |
| Cow position: | chr16:14382532-14382379 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 105, 139 |
| Conread position: | 49-210 |
| Cow position: | chr16:15308935-15308769 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 101, 62 |
| Conread position: | 49-283 |
| Cow position: | chr16:39645957-39645718 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 104, 178 |
| Conread position: | 54-151 |
| Cow position: | chr16:27787980-27787883 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 58-208 |
| Cow position: | chr16:32839480-32839322 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 94, 114 |
Show alignments to all cow chromosomes.