Cow genome map
Conread name: | Ss1.1-Lym2-sn01_H04.f.5 |
Conread position: | 1-215 |
Cow position: | chr19:50668841-50668622 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 155 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 134, 34 |
Conread position: | 2-245 |
Cow position: | chr19:23821696-23821945 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 168 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 150, 26 |
Conread position: | 3-200 |
Cow position: | chr19:49401737-49401542 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 136 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 40, 65 |
Conread position: | 4-194 |
Cow position: | chr19:32471727-32471534 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 140 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 126, 32 |
Conread position: | 4-200 |
Cow position: | chr19:158431-158624 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 136 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 97, 14 |
Conread position: | 4-211 |
Cow position: | chr19:2481079-2481293 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 152 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 138, 15 |
Conread position: | 5-185 |
Cow position: | chr19:24928181-24928366 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 138 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 27, 40 |
Conread position: | 5-185 |
Cow position: | chr19:40883775-40883954 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 134 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 148, 35 |
Conread position: | 5-191 |
Cow position: | chr19:27081656-27081840 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 128 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 5-194 |
Cow position: | chr19:19500934-19501124 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 136 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 145, 31 |
Conread position: | 5-218 |
Cow position: | chr19:37626666-37626881 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 153 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 147, 18 |
Conread position: | 6-151 |
Cow position: | chr19:40439346-40439203 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 107 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 6-197 |
Cow position: | chr19:45146515-45146328 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 146 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 21, 43 |
Conread position: | 6-200 |
Cow position: | chr19:1581147-1581345 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 139 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 144, 30 |
Conread position: | 6-200 |
Cow position: | chr19:33586108-33586299 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 140 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 147, 30 |
Conread position: | 6-208 |
Cow position: | chr19:38439522-38439327 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 148 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 173, 15 |
Conread position: | 7-152 |
Cow position: | chr19:30352969-30352830 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 114 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 94, 28 |
Conread position: | 7-191 |
Cow position: | chr19:36100995-36101182 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 132 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 147, 29 |
Conread position: | 7-193 |
Cow position: | chr19:14581039-14580850 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 139 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 143, 33 |
Conread position: | 8-169 |
Cow position: | chr19:52147667-52147834 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 125 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 7, 36 |
Conread position: | 12-194 |
Cow position: | chr19:28794579-28794764 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 134 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 140, 29 |
Conread position: | 14-204 |
Cow position: | chr19:5765622-5765431 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 138 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 136, 22 |
Conread position: | 17-194 |
Cow position: | chr19:12551355-12551529 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 128 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 115, 24 |
Conread position: | 18-144 |
Cow position: | chr19:6532205-6532081 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 98 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 18-151 |
Cow position: | chr19:4283552-4283683 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 102 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 18-151 |
Cow position: | chr19:42304877-42305008 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 102 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 18-156 |
Cow position: | chr19:777262-777126 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 106 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 18-171 |
Cow position: | chr19:2249738-2249894 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 120 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 134, 15 |
Conread position: | 18-171 |
Cow position: | chr19:10196154-10196003 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 120 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 132, 15 |
Conread position: | 18-171 |
Cow position: | chr19:20928922-20928766 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 120 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 132, 15 |
Conread position: | 18-171 |
Cow position: | chr19:23488502-23488346 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 120 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 134, 15 |
Conread position: | 18-171 |
Cow position: | chr19:30515296-30515452 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 119 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 132, 15 |
Conread position: | 18-171 |
Cow position: | chr19:41223917-41224073 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 120 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 132, 18 |
Conread position: | 18-171 |
Cow position: | chr19:55163911-55164067 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 121 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 134, 15 |
Conread position: | 18-185 |
Cow position: | chr19:5887898-5887728 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 127 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 132, 18 |
Conread position: | 18-185 |
Cow position: | chr19:29394088-29393918 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 126 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 132, 15 |
Conread position: | 18-185 |
Cow position: | chr19:33118978-33119148 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 129 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 135, 15 |
Conread position: | 18-185 |
Cow position: | chr19:35081975-35081805 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 126 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 132, 18 |
Conread position: | 18-185 |
Cow position: | chr19:41204481-41204651 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 129 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 132, 18 |
Conread position: | 18-185 |
Cow position: | chr19:48626801-48626635 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 127 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 132, 16 |
Conread position: | 18-191 |
Cow position: | chr19:55843740-55843569 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 124 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 18-194 |
Cow position: | chr19:23383185-23383006 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 134 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 134, 22 |
Conread position: | 21-185 |
Cow position: | chr19:12776984-12776817 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 122 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 131, 20 |
Conread position: | 21-200 |
Cow position: | chr19:12652618-12652439 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 134 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 131, 20 |
Conread position: | 29-200 |
Cow position: | chr19:11778057-11777881 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 128 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 125, 0 |
Conread position: | 31-194 |
Cow position: | chr19:28575665-28575835 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 123 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 33-151 |
Cow position: | chr19:37844045-37844161 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 94 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 33-171 |
Cow position: | chr19:35362826-35362969 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 110 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 33-185 |
Cow position: | chr19:21336835-21336992 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 118 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 33-216 |
Cow position: | chr19:15252749-15252558 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 138 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 35-185 |
Cow position: | chr19:35288827-35288979 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 122 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 8, 36 |
Conread position: | 35-200 |
Cow position: | chr19:35781610-35781440 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 135 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 8, 152 |
Conread position: | 35-200 |
Cow position: | chr19:39181802-39181976 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 134 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 8, 51 |
Conread position: | 36-150 |
Cow position: | chr19:30540663-30540777 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 90 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 36-151 |
Cow position: | chr19:8567090-8566975 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 93 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 36-171 |
Cow position: | chr19:3086519-3086382 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 104 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 36-171 |
Cow position: | chr19:5679921-5680061 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 109 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 36-171 |
Cow position: | chr19:30037177-30037317 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 109 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 36-178 |
Cow position: | chr19:7346113-7345967 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 114 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 116, 16 |
Conread position: | 36-185 |
Cow position: | chr19:16316489-16316643 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 116 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 36-194 |
Cow position: | chr19:14180271-14180434 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 120 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 99, 105 |
Conread position: | 36-194 |
Cow position: | chr19:29367258-29367095 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 121 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 36-194 |
Cow position: | chr19:29624766-29624603 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 120 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 36-199 |
Cow position: | chr19:5429081-5429247 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 128 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 114, 149 |
Conread position: | 36-200 |
Cow position: | chr19:20612064-20611898 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 127 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 116, 149 |
Conread position: | 36-200 |
Cow position: | chr19:41518903-41518739 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 119 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 98, 144 |
Conread position: | 36-220 |
Cow position: | chr19:39976256-39976442 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 139 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 117, 149 |
Conread position: | 37-171 |
Cow position: | chr19:3406909-3406770 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 109 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 115, 0 |
Conread position: | 37-188 |
Cow position: | chr19:43149312-43149154 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 118 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 37-227 |
Cow position: | chr19:22860125-22860325 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 149 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 41-171 |
Cow position: | chr19:1169197-1169331 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 105 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 41-173 |
Cow position: | chr19:8206294-8206431 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 108 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 41-185 |
Cow position: | chr19:24734862-24734713 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 114 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 41-194 |
Cow position: | chr19:22512966-22512811 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 120 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 110, 93 |
Conread position: | 41-194 |
Cow position: | chr19:23463224-23463382 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 117 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 113, 0 |
Conread position: | 41-211 |
Cow position: | chr19:36150501-36150323 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 137 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 111, 17 |
Conread position: | 42-127 |
Cow position: | chr19:39454385-39454470 (view UCSC Genome Browser custom track) |
Alignm length: | 86 |
Alignm identity: | 75 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 42-178 |
Cow position: | chr19:48534445-48534304 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 106 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 110, 0 |
Conread position: | 42-185 |
Cow position: | chr19:40790634-40790782 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 111 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 110, 0 |
Conread position: | 42-185 |
Cow position: | chr19:41674034-41674181 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 111 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 110, 62 |
Conread position: | 42-188 |
Cow position: | chr19:4447936-4447785 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 42-188 |
Cow position: | chr19:50561784-50561636 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 116 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 111, 92 |
Conread position: | 42-194 |
Cow position: | chr19:930543-930386 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 120 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 110, 0 |
Conread position: | 42-194 |
Cow position: | chr19:30518457-30518300 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 115 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 110, 0 |
Conread position: | 42-200 |
Cow position: | chr19:34905601-34905761 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 124 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 110, 142 |
Conread position: | 42-216 |
Cow position: | chr19:33932747-33932926 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 130 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 103, 164 |
Conread position: | 42-242 |
Cow position: | chr19:42867352-42867154 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 143 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 108, 141 |
Conread position: | 47-199 |
Cow position: | chr19:39794177-39794023 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 122 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 105, 141 |
Show alignments to all cow chromosomes.