Cow genome map

Conread name: Ss1.1-Lym2-sn01_H04.f.5

Conread position: 1-171
Cow position: chr21:451717-451539 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 33

Conread position: 1-206
Cow position: chr21:20490627-20490833 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 153, 16

Conread position: 1-222
Cow position: chr21:19127554-19127328 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 40

Conread position: 1-234
Cow position: chr21:15943992-15943764 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 167, 28

Conread position: 2-185
Cow position: chr21:33728941-33728756 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 143, 27

Conread position: 2-194
Cow position: chr21:38021015-38020826 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 61, 41

Conread position: 2-200
Cow position: chr21:19050980-19051179 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 146, 32

Conread position: 2-200
Cow position: chr21:22456708-22456510 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 133, 26

Conread position: 2-200
Cow position: chr21:28028473-28028265 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 2-209
Cow position: chr21:9851840-9851622 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 18

Conread position: 2-232
Cow position: chr21:5634528-5634287 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 141

Conread position: 5-194
Cow position: chr21:37517863-37518055 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 35

Conread position: 5-194
Cow position: chr21:48531009-48530811 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 6-194
Cow position: chr21:149977-149787 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 146, 35

Conread position: 6-194
Cow position: chr21:17370729-17370920 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 147, 29

Conread position: 6-200
Cow position: chr21:37298971-37298776 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 144, 38

Conread position: 6-220
Cow position: chr21:23383501-23383707 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 7-137
Cow position: chr21:5901325-5901452 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 7-171
Cow position: chr21:36854743-36854576 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 143, 29

Conread position: 7-185
Cow position: chr21:7597441-7597622 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 143, 29

Conread position: 7-185
Cow position: chr21:31950243-31950065 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 143, 26

Conread position: 7-199
Cow position: chr21:23606172-23605978 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 130, 34

Conread position: 8-222
Cow position: chr21:1760642-1760857 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 146, 26

Conread position: 12-211
Cow position: chr21:2289873-2289668 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 123

Conread position: 14-189
Cow position: chr21:45457220-45457039 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 140, 0

Conread position: 14-211
Cow position: chr21:45162348-45162550 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 7

Conread position: 14-239
Cow position: chr21:46241701-46241930 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 25, 31

Conread position: 15-132
Cow position: chr21:42454892-42454778 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 17-181
Cow position: chr21:4279127-4278960 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 128, 24

Conread position: 17-196
Cow position: chr21:18285622-18285443 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 73, 24

Conread position: 17-200
Cow position: chr21:471109-470929 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 17-200
Cow position: chr21:16278217-16278038 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 133, 19

Conread position: 18-171
Cow position: chr21:3923730-3923574 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 134, 22

Conread position: 18-171
Cow position: chr21:4898154-4898310 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 134, 22

Conread position: 18-171
Cow position: chr21:11663425-11663581 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 132, 18

Conread position: 18-171
Cow position: chr21:13735343-13735499 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 134, 22

Conread position: 18-171
Cow position: chr21:16575628-16575784 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 135, 18

Conread position: 18-171
Cow position: chr21:19614063-19613906 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 132, 15

Conread position: 18-171
Cow position: chr21:19626891-19627047 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 132, 15

Conread position: 18-171
Cow position: chr21:25598483-25598327 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 132, 15

Conread position: 18-171
Cow position: chr21:26633411-26633567 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 132, 22

Conread position: 18-171
Cow position: chr21:26854874-26855030 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 135, 18

Conread position: 18-171
Cow position: chr21:26875410-26875254 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 134, 22

Conread position: 18-171
Cow position: chr21:30298298-30298142 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 132, 15

Conread position: 18-171
Cow position: chr21:30655458-30655302 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 132, 18

Conread position: 18-171
Cow position: chr21:32238158-32238002 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 131, 18

Conread position: 18-171
Cow position: chr21:32773754-32773598 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 132, 18

Conread position: 18-171
Cow position: chr21:33709681-33709837 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 132, 18

Conread position: 18-171
Cow position: chr21:33770496-33770340 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 132, 15

Conread position: 18-171
Cow position: chr21:34074456-34074300 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 134, 22

Conread position: 18-171
Cow position: chr21:37923995-37923839 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 134, 15

Conread position: 18-171
Cow position: chr21:40479080-40478924 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 132, 18

Conread position: 18-171
Cow position: chr21:47168780-47168623 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 56, 15

Conread position: 18-171
Cow position: chr21:48273379-48273534 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 135, 18

Conread position: 18-173
Cow position: chr21:1752208-1752050 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 132, 15

Conread position: 18-178
Cow position: chr21:36534395-36534556 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 135, 18

Conread position: 18-185
Cow position: chr21:4719001-4719171 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 132, 18

Conread position: 18-185
Cow position: chr21:7524936-7524766 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 132, 18

Conread position: 18-185
Cow position: chr21:11144031-11144201 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 134, 15

Conread position: 18-185
Cow position: chr21:21103537-21103367 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 132, 15

Conread position: 18-185
Cow position: chr21:23341470-23341300 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 132, 18

Conread position: 18-185
Cow position: chr21:26756904-26757074 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 127, 15

Conread position: 18-185
Cow position: chr21:30850681-30850511 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 132, 18

Conread position: 18-185
Cow position: chr21:39429439-39429269 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 134, 15

Conread position: 18-185
Cow position: chr21:41795906-41796076 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 132, 18

Conread position: 18-194
Cow position: chr21:2514666-2514487 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 134, 15

Conread position: 18-194
Cow position: chr21:18574333-18574154 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 132, 15

Conread position: 18-194
Cow position: chr21:30966124-30966303 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 134, 15

Conread position: 18-194
Cow position: chr21:39486455-39486634 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 134, 22

Conread position: 18-200
Cow position: chr21:26628586-26628405 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 134, 22

Conread position: 18-212
Cow position: chr21:47962-47767 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 132, 17

Conread position: 18-218
Cow position: chr21:30571261-30571459 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 18-231
Cow position: chr21:11292525-11292304 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 132, 15

Conread position: 18-248
Cow position: chr21:25738381-25738616 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 132, 18

Conread position: 19-197
Cow position: chr21:3586082-3586259 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 135, 22

Conread position: 19-200
Cow position: chr21:2878024-2878202 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 133, 22

Conread position: 21-194
Cow position: chr21:44761866-44762044 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 24

Conread position: 22-185
Cow position: chr21:33316551-33316717 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 128, 19

Conread position: 29-151
Cow position: chr21:27521886-27522008 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 31-189
Cow position: chr21:22463999-22463837 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 105

Conread position: 32-152
Cow position: chr21:13199727-13199605 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 33-185
Cow position: chr21:13315267-13315110 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 108

Conread position: 33-200
Cow position: chr21:22719296-22719464 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 120, 88

Conread position: 34-197
Cow position: chr21:81549-81381 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 35-200
Cow position: chr21:42842483-42842652 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 118, 8

Conread position: 36-151
Cow position: chr21:10571073-10570958 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 36-171
Cow position: chr21:3496703-3496843 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 36-171
Cow position: chr21:47978070-47977930 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 36-181
Cow position: chr21:28881586-28881440 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 36-185
Cow position: chr21:5642034-5642188 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 116, 0

Conread position: 36-185
Cow position: chr21:19351058-19351212 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 36-185
Cow position: chr21:27287779-27287622 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 36-185
Cow position: chr21:28989087-28988932 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 36-189
Cow position: chr21:25344355-25344197 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 36-194
Cow position: chr21:5009666-5009829 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 36-194
Cow position: chr21:30595288-30595450 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 36-197
Cow position: chr21:7793718-7793883 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 118, 48

Conread position: 36-197
Cow position: chr21:42113232-42113399 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 118, 33

Conread position: 36-200
Cow position: chr21:9010302-9010470 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 117, 140

Conread position: 36-200
Cow position: chr21:9968517-9968684 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 150

Conread position: 36-206
Cow position: chr21:29484438-29484264 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 36-210
Cow position: chr21:34301385-34301201 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 36-221
Cow position: chr21:27619717-27619904 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 116, 149

Conread position: 36-223
Cow position: chr21:30159266-30159460 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 116, 136

Conread position: 37-151
Cow position: chr21:10075462-10075576 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 37-171
Cow position: chr21:23329541-23329680 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 37-171
Cow position: chr21:31040033-31040172 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 37-171
Cow position: chr21:34181467-34181328 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 37-171
Cow position: chr21:36892430-36892569 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 37-185
Cow position: chr21:39469963-39470115 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 113, 63

Conread position: 37-200
Cow position: chr21:3765966-3766133 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 116, 56

Conread position: 37-215
Cow position: chr21:24869515-24869335 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 117, 153

Conread position: 37-231
Cow position: chr21:25480073-25479869 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 113, 198

Conread position: 39-234
Cow position: chr21:10093604-10093404 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 147

Conread position: 40-171
Cow position: chr21:27147753-27147889 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 41-177
Cow position: chr21:7047387-7047525 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 41-178
Cow position: chr21:16890046-16890188 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 109, 0

Conread position: 41-178
Cow position: chr21:45842205-45842347 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 111, 0

Conread position: 41-185
Cow position: chr21:42917591-42917442 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 41-197
Cow position: chr21:28026603-28026445 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 113, 85

Conread position: 42-178
Cow position: chr21:5020935-5020794 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 42-185
Cow position: chr21:9209104-9208958 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 42-194
Cow position: chr21:8071302-8071457 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 112, 39

Conread position: 42-194
Cow position: chr21:26744490-26744645 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 111, 146

Conread position: 42-194
Cow position: chr21:34684827-34684670 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 99

Conread position: 42-195
Cow position: chr21:2293387-2293543 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 111, 92

Conread position: 42-198
Cow position: chr21:12075935-12076096 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 42-200
Cow position: chr21:43403641-43403801 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 110, 143

Conread position: 43-178
Cow position: chr21:36506043-36506183 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 43-194
Cow position: chr21:3782568-3782412 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 43-200
Cow position: chr21:30858749-30858591 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 111, 51

Conread position: 44-183
Cow position: chr21:37873878-37874022 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 44-185
Cow position: chr21:9011700-9011843 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 109, 90

Conread position: 44-194
Cow position: chr21:4585882-4586037 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 82, 146

Conread position: 45-194
Cow position: chr21:36376774-36376621 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 107, 66

Conread position: 46-194
Cow position: chr21:4541394-4541547 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 54-240
Cow position: chr21:32891328-32891519 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 99, 151

Show alignments to all cow chromosomes.