Cow genome map


           Conread name:
           Ss1.1-Lym2-sn10_H05.f.5
        

               Conread position:
               1-114
               

               Cow position:
               chr2:74996641-74996527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               114-206
               

               Cow position:
               chr2:74980450-74980358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               284-418
               

               Cow position:
               chr2:74977924-74977790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               421-543
               

               Cow position:
               chr2:74977087-74976965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               119
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               543-639
               

               Cow position:
               chr2:74975823-74975727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               85
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               638-742
               

               Cow position:
               chr2:74973452-74973348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               731-2167
               

               Cow position:
               chr2:74972105-74970718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               1440
               

               Alignm identity:
               1170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               608, 162
               
Show alignments to all cow chromosomes.