Cow genome map


           Conread name:
           Ss1.1-Lym2-sn12_D02.f.5
        

               Conread position:
               43-178
               

               Cow position:
               chr17:39358408-39358273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               172-260
               

               Cow position:
               chr17:39358002-39357914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               260-345
               

               Cow position:
               chr17:39357394-39357309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               86
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               345-502
               

               Cow position:
               chr17:39357213-39357056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               146
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               502-716
               

               Cow position:
               chr17:39355865-39355670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               1145-1544
               

               Cow position:
               chr17:39355228-39354822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 48
               
Show alignments to all cow chromosomes.