Cow genome map


           Conread name:
           Ss1.1-Lym2-sn13_H11.f.5.5
        

               Conread position:
               3-154
               

               Cow position:
               chr13:54815461-54815612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               131
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-273
               

               Cow position:
               chr13:54816220-54816347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               267-371
               

               Cow position:
               chr13:54816662-54816766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               370-491
               

               Cow position:
               chr13:54817697-54817818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               485-596
               

               Cow position:
               chr13:54818111-54818222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               594-764
               

               Cow position:
               chr13:54819690-54819860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               767-960
               

               Cow position:
               chr13:54821751-54821944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               143, 150
               

               Conread position:
               966-1133
               

               Cow position:
               chr13:54822797-54822964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1129-1264
               

               Cow position:
               chr13:54823355-54823490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1550-1683
               

               Cow position:
               chr13:54826542-54826675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.