Cow genome map


           Conread name:
           Ss1.1-Lym2-sn27_H02.f.5
        

               Conread position:
               303-468
               

               Cow position:
               chr24:6709756-6709589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               75, 123
               

               Conread position:
               304-469
               

               Cow position:
               chr24:32679223-32679055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               22, 55
               

               Conread position:
               306-464
               

               Cow position:
               chr24:42186599-42186439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               18, 35
               

               Conread position:
               306-469
               

               Cow position:
               chr24:24483566-24483731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               13, 108
               

               Conread position:
               312-445
               

               Cow position:
               chr24:20204829-20204965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               18, 8
               

               Conread position:
               313-469
               

               Cow position:
               chr24:33728037-33727881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               65, 76
               

               Conread position:
               323-463
               

               Cow position:
               chr24:7758456-7758599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 26
               

               Conread position:
               324-469
               

               Cow position:
               chr24:26285157-26285014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               325-473
               

               Cow position:
               chr24:13064103-13063955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               55, 79
               

               Conread position:
               328-467
               

               Cow position:
               chr24:23219717-23219577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               52, 21
               
Show alignments to all cow chromosomes.