Cow genome map


           Conread name:
           Ss1.1-Lym2-sn27_H02.f.5
        

               Conread position:
               303-466
               

               Cow position:
               chr26:20163126-20162960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               30, 14
               

               Conread position:
               305-439
               

               Cow position:
               chr26:27272021-27272158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 9
               

               Conread position:
               307-469
               

               Cow position:
               chr26:10746329-10746494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               17, 63
               

               Conread position:
               310-438
               

               Cow position:
               chr26:22646085-22645954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               310-460
               

               Cow position:
               chr26:27540286-27540128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               7, 118
               

               Conread position:
               316-467
               

               Cow position:
               chr26:2504018-2504171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               8, 100
               

               Conread position:
               321-467
               

               Cow position:
               chr26:25011949-25011804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               323-469
               

               Cow position:
               chr26:25444086-25443937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               325-477
               

               Cow position:
               chr26:12840052-12840204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               119, 23
               

               Conread position:
               346-469
               

               Cow position:
               chr26:18169354-18169230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               36, 79
               
Show alignments to all cow chromosomes.