Cow genome map
| Conread name: | Ss1.1-Lym2-sn29_A08.f.5 |
| Conread position: | 491-788 |
| Cow position: | chr12:39591456-39591740 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 188, 25 |
| Conread position: | 491-820 |
| Cow position: | chr12:7000407-7000731 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 501-738 |
| Cow position: | chr12:5543602-5543839 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 101, 190 |
| Conread position: | 501-774 |
| Cow position: | chr12:29018092-29017822 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 73 |
| Conread position: | 501-820 |
| Cow position: | chr12:22882247-22881926 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 113, 84 |
| Conread position: | 501-820 |
| Cow position: | chr12:44920227-44919907 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 14, 165 |
| Conread position: | 501-828 |
| Cow position: | chr12:6720515-6720188 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 11, 61 |
| Conread position: | 501-831 |
| Cow position: | chr12:38455106-38454772 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 83, 17 |
| Conread position: | 501-841 |
| Cow position: | chr12:34473439-34473773 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 100 |
| Conread position: | 502-814 |
| Cow position: | chr12:39486594-39486306 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 57, 78 |
| Conread position: | 504-831 |
| Cow position: | chr12:46120649-46120968 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 12, 103 |
| Conread position: | 505-778 |
| Cow position: | chr12:36261855-36261603 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 505-794 |
| Cow position: | chr12:33319477-33319769 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 106, 246 |
| Conread position: | 505-820 |
| Cow position: | chr12:22284961-22285246 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 506-820 |
| Cow position: | chr12:11090605-11090300 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 121, 198 |
| Conread position: | 506-828 |
| Cow position: | chr12:44622521-44622219 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 250, 73 |
| Conread position: | 507-702 |
| Cow position: | chr12:4014262-4014443 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 510-731 |
| Cow position: | chr12:27572052-27572279 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 514-759 |
| Cow position: | chr12:36993940-36994183 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 67, 84 |
| Conread position: | 514-825 |
| Cow position: | chr12:18420768-18421055 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 257, 41 |
| Conread position: | 514-825 |
| Cow position: | chr12:29770399-29770705 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 180 |
| Conread position: | 514-843 |
| Cow position: | chr12:18765792-18766129 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 90, 28 |
| Conread position: | 517-815 |
| Cow position: | chr12:27037266-27037573 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 517-828 |
| Cow position: | chr12:34148189-34148484 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 124, 88 |
| Conread position: | 518-763 |
| Cow position: | chr12:46463902-46464137 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 518-813 |
| Cow position: | chr12:18021027-18020737 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 212 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 243, 80 |
| Conread position: | 521-815 |
| Cow position: | chr12:31960054-31959765 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 68, 189 |
| Conread position: | 522-828 |
| Cow position: | chr12:45028517-45028217 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 223, 142 |
| Conread position: | 572-828 |
| Cow position: | chr12:17774912-17774664 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 66, 54 |
| Conread position: | 580-828 |
| Cow position: | chr12:30745830-30745581 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 5 |
| Conread position: | 585-789 |
| Cow position: | chr12:30819348-30819145 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 168, 36 |
| Conread position: | 588-824 |
| Cow position: | chr12:4341640-4341870 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 589-815 |
| Cow position: | chr12:43942566-43942349 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 93, 32 |
| Conread position: | 591-827 |
| Cow position: | chr12:10942388-10942151 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 71, 61 |
| Conread position: | 591-828 |
| Cow position: | chr12:36544543-36544785 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 124, 31 |
| Conread position: | 593-727 |
| Cow position: | chr12:29731413-29731279 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 593-760 |
| Cow position: | chr12:27357484-27357320 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 593-786 |
| Cow position: | chr12:33949003-33948808 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 593-790 |
| Cow position: | chr12:37514183-37514380 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 164, 38 |
| Conread position: | 593-803 |
| Cow position: | chr12:18582894-18583103 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 172, 100 |
| Conread position: | 593-804 |
| Cow position: | chr12:16341990-16341781 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 165, 59 |
| Conread position: | 593-819 |
| Cow position: | chr12:7902703-7902928 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 117, 29 |
| Conread position: | 595-815 |
| Cow position: | chr12:15703402-15703625 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 171, 16 |
| Conread position: | 595-824 |
| Cow position: | chr12:6410639-6410863 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 84, 27 |
| Conread position: | 595-828 |
| Cow position: | chr12:42684848-42685082 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 596-771 |
| Cow position: | chr12:17252107-17252277 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 596-820 |
| Cow position: | chr12:26217727-26217953 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 28, 165 |
| Conread position: | 596-824 |
| Cow position: | chr12:19258374-19258148 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 13, 89 |
| Conread position: | 596-828 |
| Cow position: | chr12:17031711-17031480 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 76 |
| Conread position: | 596-843 |
| Cow position: | chr12:7299362-7299612 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 31, 52 |
| Conread position: | 598-820 |
| Cow position: | chr12:24116270-24116490 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 154, 23 |
| Conread position: | 599-765 |
| Cow position: | chr12:12232973-12232810 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 22 |
| Conread position: | 599-772 |
| Cow position: | chr12:5839564-5839738 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 58, 17 |
| Conread position: | 599-814 |
| Cow position: | chr12:9766786-9767001 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 162, 23 |
| Conread position: | 599-821 |
| Cow position: | chr12:45820275-45820496 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 599-824 |
| Cow position: | chr12:16670361-16670134 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 31, 21 |
| Conread position: | 599-828 |
| Cow position: | chr12:6485121-6485342 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 165, 24 |
| Conread position: | 599-828 |
| Cow position: | chr12:15089606-15089379 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 599-828 |
| Cow position: | chr12:37770959-37770741 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 162, 17 |
| Conread position: | 599-829 |
| Cow position: | chr12:18518764-18518531 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 180 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 154, 17 |
| Conread position: | 600-756 |
| Cow position: | chr12:15260855-15260699 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 24, 45 |
| Conread position: | 600-820 |
| Cow position: | chr12:6241409-6241185 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 157, 22 |
| Conread position: | 600-823 |
| Cow position: | chr12:5635363-5635577 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 601-784 |
| Cow position: | chr12:26777102-26777283 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 164, 16 |
| Conread position: | 601-804 |
| Cow position: | chr12:3371455-3371655 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 163, 83 |
| Conread position: | 601-825 |
| Cow position: | chr12:37169856-37170075 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 601-832 |
| Cow position: | chr12:25561458-25561231 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 602-783 |
| Cow position: | chr12:5554246-5554426 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 163, 20 |
| Conread position: | 602-824 |
| Cow position: | chr12:5714717-5714497 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 602-824 |
| Cow position: | chr12:33323405-33323626 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 106 |
| Conread position: | 603-818 |
| Cow position: | chr12:35669374-35669598 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 603-819 |
| Cow position: | chr12:15429508-15429721 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 603-820 |
| Cow position: | chr12:4008196-4008404 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 8 |
| Conread position: | 603-824 |
| Cow position: | chr12:4720036-4719815 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 33, 42 |
| Conread position: | 604-756 |
| Cow position: | chr12:45092534-45092382 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 604-759 |
| Cow position: | chr12:19274312-19274464 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 605-802 |
| Cow position: | chr12:11660008-11659816 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 161, 63 |
| Conread position: | 605-820 |
| Cow position: | chr12:38774155-38774366 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 15, 139 |
| Conread position: | 605-828 |
| Cow position: | chr12:24663200-24662981 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 57, 16 |
| Conread position: | 605-830 |
| Cow position: | chr12:2813314-2813090 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 159, 195 |
| Conread position: | 606-828 |
| Cow position: | chr12:23798183-23797968 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 608-800 |
| Cow position: | chr12:9143469-9143280 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 161, 13 |
| Conread position: | 611-828 |
| Cow position: | chr12:18388211-18388417 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 97, 10 |
| Conread position: | 615-823 |
| Cow position: | chr12:42784389-42784177 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 616-814 |
| Cow position: | chr12:5631806-5632003 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 147, 77 |
| Conread position: | 616-815 |
| Cow position: | chr12:18123745-18123558 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 616-820 |
| Cow position: | chr12:7884605-7884809 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 616-820 |
| Cow position: | chr12:15122402-15122195 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 616-828 |
| Cow position: | chr12:30210559-30210347 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 155, 169 |
| Conread position: | 617-774 |
| Cow position: | chr12:23644728-23644887 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 617-814 |
| Cow position: | chr12:17879227-17879426 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 144, 54 |
| Conread position: | 617-817 |
| Cow position: | chr12:19261270-19261074 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 145, 170 |
| Conread position: | 617-820 |
| Cow position: | chr12:17269877-17269672 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 162 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 617-820 |
| Cow position: | chr12:30805933-30805727 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 143 |
| Conread position: | 617-824 |
| Cow position: | chr12:47804231-47804023 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 140, 54 |
| Conread position: | 617-825 |
| Cow position: | chr12:19507711-19507499 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 140, 9 |
| Conread position: | 617-828 |
| Cow position: | chr12:17001333-17001127 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 617-828 |
| Cow position: | chr12:19691159-19691369 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 149, 72 |
| Conread position: | 617-829 |
| Cow position: | chr12:39465654-39465446 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 150, 184 |
| Conread position: | 617-843 |
| Cow position: | chr12:25917203-25917419 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 194, 11 |
| Conread position: | 618-778 |
| Cow position: | chr12:25805055-25805216 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 108 |
| Conread position: | 618-794 |
| Cow position: | chr12:46792407-46792238 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 618-827 |
| Cow position: | chr12:26575970-26575752 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 618-829 |
| Cow position: | chr12:5906130-5905918 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 619-829 |
| Cow position: | chr12:24032569-24032365 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 621-817 |
| Cow position: | chr12:11056947-11056750 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 20, 25 |
| Conread position: | 622-795 |
| Cow position: | chr12:6468990-6469165 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 622-815 |
| Cow position: | chr12:18577910-18577718 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 40, 183 |
| Conread position: | 622-820 |
| Cow position: | chr12:30170738-30170541 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 79, 15 |
| Conread position: | 622-828 |
| Cow position: | chr12:32169610-32169406 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 136, 87 |
| Conread position: | 623-814 |
| Cow position: | chr12:6488924-6489111 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 135, 73 |
| Conread position: | 623-828 |
| Cow position: | chr12:15531123-15530923 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 134, 40 |
| Conread position: | 623-848 |
| Cow position: | chr12:30605097-30605319 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 137, 48 |
| Conread position: | 625-769 |
| Cow position: | chr12:15641040-15641184 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 79, 134 |
| Conread position: | 625-823 |
| Cow position: | chr12:31429504-31429700 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 133, 87 |
| Conread position: | 631-825 |
| Cow position: | chr12:35378262-35378069 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 112, 53 |
| Conread position: | 637-831 |
| Cow position: | chr12:3906527-3906335 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 139, 9 |
| Conread position: | 639-829 |
| Cow position: | chr12:17080313-17080124 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 114, 158 |
| Conread position: | 644-800 |
| Cow position: | chr12:6235337-6235176 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 649-819 |
| Cow position: | chr12:18023382-18023559 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 109, 156 |
| Conread position: | 652-826 |
| Cow position: | chr12:3092540-3092706 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 655-821 |
| Cow position: | chr12:44733055-44733220 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 76 |
| Conread position: | 657-829 |
| Cow position: | chr12:28471682-28471502 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 659-828 |
| Cow position: | chr12:20776891-20777058 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 99, 33 |
| Conread position: | 662-824 |
| Cow position: | chr12:12637153-12637316 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 666-824 |
| Cow position: | chr12:15038950-15039107 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 666-829 |
| Cow position: | chr12:730910-731073 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 100, 75 |
| Conread position: | 678-825 |
| Cow position: | chr12:6164008-6164157 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 684-825 |
| Cow position: | chr12:26317473-26317330 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
Show alignments to all cow chromosomes.