Cow genome map
| Conread name: | Ss1.1-Lym2-sn29_A08.f.5 |
| Conread position: | 496-828 |
| Cow position: | chr21:13488828-13488489 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 232 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 501-695 |
| Cow position: | chr21:47451452-47451268 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 44, 38 |
| Conread position: | 501-794 |
| Cow position: | chr21:7394003-7394284 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 501-795 |
| Cow position: | chr21:44825608-44825891 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 187, 17 |
| Conread position: | 501-801 |
| Cow position: | chr21:46132863-46132569 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 14, 88 |
| Conread position: | 501-820 |
| Cow position: | chr21:34001-33696 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 155, 78 |
| Conread position: | 501-823 |
| Cow position: | chr21:42841318-42841628 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 255, 24 |
| Conread position: | 501-824 |
| Cow position: | chr21:10515102-10514775 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 135, 18 |
| Conread position: | 501-825 |
| Cow position: | chr21:5392238-5392570 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 17 |
| Conread position: | 501-825 |
| Cow position: | chr21:20260026-20260351 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 77 |
| Conread position: | 501-828 |
| Cow position: | chr21:13365636-13365305 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 74 |
| Conread position: | 504-820 |
| Cow position: | chr21:36910216-36909910 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 137, 39 |
| Conread position: | 504-825 |
| Cow position: | chr21:29069058-29069359 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 68 |
| Conread position: | 505-739 |
| Cow position: | chr21:41450660-41450437 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 176, 67 |
| Conread position: | 505-814 |
| Cow position: | chr21:33351034-33350721 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 77, 13 |
| Conread position: | 505-820 |
| Cow position: | chr21:40432728-40432425 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 505-824 |
| Cow position: | chr21:42384799-42384481 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 505-828 |
| Cow position: | chr21:41522149-41522440 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 265, 34 |
| Conread position: | 505-828 |
| Cow position: | chr21:46264455-46264139 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 506-751 |
| Cow position: | chr21:5486232-5486471 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 170, 56 |
| Conread position: | 506-803 |
| Cow position: | chr21:30980296-30980586 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 506-815 |
| Cow position: | chr21:30249914-30250216 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 105, 126 |
| Conread position: | 506-828 |
| Cow position: | chr21:27568896-27569196 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 257, 66 |
| Conread position: | 508-843 |
| Cow position: | chr21:29014276-29014609 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 103 |
| Conread position: | 513-711 |
| Cow position: | chr21:42958473-42958663 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 513-824 |
| Cow position: | chr21:26245186-26244891 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 514-828 |
| Cow position: | chr21:35569084-35569414 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 196, 0 |
| Conread position: | 514-828 |
| Cow position: | chr21:36795879-36795567 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 518-686 |
| Cow position: | chr21:48478622-48478790 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 131 |
| Conread position: | 518-743 |
| Cow position: | chr21:14228009-14228229 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 518-790 |
| Cow position: | chr21:11057608-11057870 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 58, 94 |
| Conread position: | 526-736 |
| Cow position: | chr21:8506278-8506488 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 17, 41 |
| Conread position: | 557-766 |
| Cow position: | chr21:17252737-17252950 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 7, 151 |
| Conread position: | 568-843 |
| Cow position: | chr21:40899563-40899291 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 167, 52 |
| Conread position: | 579-820 |
| Cow position: | chr21:18800321-18800554 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 131, 43 |
| Conread position: | 579-824 |
| Cow position: | chr21:734804-734567 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 214, 97 |
| Conread position: | 579-828 |
| Cow position: | chr21:27624916-27624676 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 171 |
| Conread position: | 582-828 |
| Cow position: | chr21:30222558-30222311 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 5, 236 |
| Conread position: | 584-820 |
| Cow position: | chr21:18155358-18155592 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 38 |
| Conread position: | 584-824 |
| Cow position: | chr21:8349536-8349299 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 182, 38 |
| Conread position: | 585-784 |
| Cow position: | chr21:36682532-36682332 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 175, 31 |
| Conread position: | 586-803 |
| Cow position: | chr21:7169898-7169677 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 588-820 |
| Cow position: | chr21:30835567-30835338 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 165, 29 |
| Conread position: | 590-815 |
| Cow position: | chr21:9990712-9990490 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 591-831 |
| Cow position: | chr21:7581704-7581942 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 196, 31 |
| Conread position: | 593-767 |
| Cow position: | chr21:22851119-22850949 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 593-820 |
| Cow position: | chr21:20153153-20152929 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 167, 30 |
| Conread position: | 593-828 |
| Cow position: | chr21:29485177-29484946 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 168, 29 |
| Conread position: | 595-785 |
| Cow position: | chr21:19359979-19360167 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 596-824 |
| Cow position: | chr21:9416451-9416219 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 599-758 |
| Cow position: | chr21:39393942-39393784 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 23 |
| Conread position: | 599-790 |
| Cow position: | chr21:7268689-7268878 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 599-795 |
| Cow position: | chr21:19240679-19240877 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 166, 32 |
| Conread position: | 599-812 |
| Cow position: | chr21:829016-829227 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 155, 22 |
| Conread position: | 599-819 |
| Cow position: | chr21:643517-643303 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 177, 17 |
| Conread position: | 599-820 |
| Cow position: | chr21:28030481-28030263 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 599-820 |
| Cow position: | chr21:42413901-42414126 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 599-821 |
| Cow position: | chr21:71780-71560 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 168, 22 |
| Conread position: | 599-824 |
| Cow position: | chr21:28919333-28919553 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 599-825 |
| Cow position: | chr21:11644772-11645000 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 159, 18 |
| Conread position: | 599-825 |
| Cow position: | chr21:37480158-37479929 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 79, 17 |
| Conread position: | 599-845 |
| Cow position: | chr21:11739925-11740171 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 163, 73 |
| Conread position: | 600-824 |
| Cow position: | chr21:957864-957643 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 600-828 |
| Cow position: | chr21:36297686-36297457 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 162, 21 |
| Conread position: | 601-736 |
| Cow position: | chr21:8509241-8509376 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 601-758 |
| Cow position: | chr21:24875546-24875387 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 601-803 |
| Cow position: | chr21:21615973-21615766 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 147, 10 |
| Conread position: | 601-820 |
| Cow position: | chr21:36695897-36696115 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 55 |
| Conread position: | 601-824 |
| Cow position: | chr21:10004689-10004916 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 91 |
| Conread position: | 601-829 |
| Cow position: | chr21:30592118-30592338 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 160, 21 |
| Conread position: | 601-829 |
| Cow position: | chr21:42135427-42135654 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 154, 10 |
| Conread position: | 601-837 |
| Cow position: | chr21:742466-742239 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 156, 15 |
| Conread position: | 602-828 |
| Cow position: | chr21:34654263-34654043 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 602-829 |
| Cow position: | chr21:22861189-22860965 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 163, 20 |
| Conread position: | 603-794 |
| Cow position: | chr21:35437298-35437478 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 603-820 |
| Cow position: | chr21:641778-641561 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 603-823 |
| Cow position: | chr21:17890491-17890275 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 8 |
| Conread position: | 603-824 |
| Cow position: | chr21:868734-868954 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 159, 8 |
| Conread position: | 603-824 |
| Cow position: | chr21:20160867-20160649 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 603-824 |
| Cow position: | chr21:40266312-40266095 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 28, 42 |
| Conread position: | 604-814 |
| Cow position: | chr21:8426635-8426427 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 46, 27 |
| Conread position: | 605-764 |
| Cow position: | chr21:16498703-16498550 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 605-784 |
| Cow position: | chr21:19868766-19868946 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 153, 138 |
| Conread position: | 605-815 |
| Cow position: | chr21:47719114-47719325 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 152, 26 |
| Conread position: | 605-820 |
| Cow position: | chr21:47464931-47465146 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 156, 6 |
| Conread position: | 605-824 |
| Cow position: | chr21:4399992-4399774 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 195, 128 |
| Conread position: | 605-826 |
| Cow position: | chr21:37299651-37299429 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 147, 195 |
| Conread position: | 605-828 |
| Cow position: | chr21:29001968-29002191 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 111, 44 |
| Conread position: | 606-794 |
| Cow position: | chr21:24598843-24598656 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 111, 15 |
| Conread position: | 606-820 |
| Cow position: | chr21:33982623-33982831 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 607-829 |
| Cow position: | chr21:31691667-31691448 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 156, 19 |
| Conread position: | 616-751 |
| Cow position: | chr21:5341916-5342051 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 616-764 |
| Cow position: | chr21:46451776-46451922 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 616-803 |
| Cow position: | chr21:41046984-41046796 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 148, 86 |
| Conread position: | 616-809 |
| Cow position: | chr21:802139-802321 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 616-820 |
| Cow position: | chr21:14126455-14126263 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 616-824 |
| Cow position: | chr21:25764813-25764605 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 144, 52 |
| Conread position: | 616-824 |
| Cow position: | chr21:32339562-32339766 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 616-825 |
| Cow position: | chr21:396045-395840 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 30 |
| Conread position: | 616-827 |
| Cow position: | chr21:29978582-29978792 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 616-828 |
| Cow position: | chr21:28191210-28190999 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 159, 96 |
| Conread position: | 616-829 |
| Cow position: | chr21:16570077-16569867 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 168, 22 |
| Conread position: | 616-829 |
| Cow position: | chr21:24858493-24858281 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 149, 137 |
| Conread position: | 616-833 |
| Cow position: | chr21:6713345-6713564 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 69, 77 |
| Conread position: | 617-820 |
| Cow position: | chr21:12723328-12723132 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 113, 74 |
| Conread position: | 617-824 |
| Cow position: | chr21:12461789-12461999 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 617-828 |
| Cow position: | chr21:33210366-33210169 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 131 |
| Conread position: | 617-828 |
| Cow position: | chr21:41590388-41590593 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 150, 165 |
| Conread position: | 617-828 |
| Cow position: | chr21:45262633-45262845 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 147, 182 |
| Conread position: | 617-829 |
| Cow position: | chr21:27229618-27229828 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 144, 27 |
| Conread position: | 618-815 |
| Cow position: | chr21:7673296-7673100 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 134, 72 |
| Conread position: | 618-815 |
| Cow position: | chr21:12801569-12801772 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 618-820 |
| Cow position: | chr21:45850530-45850737 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 6, 75 |
| Conread position: | 618-823 |
| Cow position: | chr21:45920883-45921086 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 618-828 |
| Cow position: | chr21:32559188-32559392 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 6, 126 |
| Conread position: | 620-774 |
| Cow position: | chr21:6851346-6851192 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 620-824 |
| Cow position: | chr21:47363560-47363767 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 95, 140 |
| Conread position: | 621-815 |
| Cow position: | chr21:42540049-42540242 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 25, 12 |
| Conread position: | 621-828 |
| Cow position: | chr21:35900016-35899811 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 84 |
| Conread position: | 622-824 |
| Cow position: | chr21:15911572-15911371 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 146, 74 |
| Conread position: | 622-828 |
| Cow position: | chr21:22014362-22014154 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 139, 166 |
| Conread position: | 622-829 |
| Cow position: | chr21:38121273-38121067 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 144, 183 |
| Conread position: | 623-828 |
| Cow position: | chr21:297925-297720 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 142, 194 |
| Conread position: | 623-828 |
| Cow position: | chr21:10561413-10561617 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 144, 10 |
| Conread position: | 624-829 |
| Cow position: | chr21:35354703-35354499 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 117 |
| Conread position: | 625-820 |
| Cow position: | chr21:44214295-44214099 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 107, 67 |
| Conread position: | 626-813 |
| Cow position: | chr21:47160386-47160199 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 136, 160 |
| Conread position: | 626-828 |
| Cow position: | chr21:28626405-28626207 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 106, 77 |
| Conread position: | 627-820 |
| Cow position: | chr21:9940023-9940215 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 143, 22 |
| Conread position: | 630-824 |
| Cow position: | chr21:19059930-19060116 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 631-820 |
| Cow position: | chr21:40192141-40192326 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 631-828 |
| Cow position: | chr21:29213997-29214188 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 632-821 |
| Cow position: | chr21:20183233-20183043 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 174, 125 |
| Conread position: | 638-828 |
| Cow position: | chr21:18850068-18850261 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 643-824 |
| Cow position: | chr21:16187656-16187837 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 118, 154 |
| Conread position: | 644-790 |
| Cow position: | chr21:12104516-12104369 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 649-824 |
| Cow position: | chr21:46551958-46552134 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 650-824 |
| Cow position: | chr21:30606942-30607118 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 657-795 |
| Cow position: | chr21:46599498-46599359 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 660-816 |
| Cow position: | chr21:10601241-10601401 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 107, 147 |
| Conread position: | 660-824 |
| Cow position: | chr21:24642654-24642491 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 660-825 |
| Cow position: | chr21:45906488-45906651 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 36, 23 |
| Conread position: | 660-831 |
| Cow position: | chr21:724751-724922 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 102, 39 |
| Conread position: | 661-828 |
| Cow position: | chr21:6834182-6834017 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 665-803 |
| Cow position: | chr21:674814-674676 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 665-829 |
| Cow position: | chr21:22856347-22856187 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 666-820 |
| Cow position: | chr21:19363331-19363487 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 666-820 |
| Cow position: | chr21:44515392-44515238 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 666-826 |
| Cow position: | chr21:20193022-20192866 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 668-824 |
| Cow position: | chr21:17856670-17856513 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 670-828 |
| Cow position: | chr21:2367456-2367301 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 671-823 |
| Cow position: | chr21:18844889-18845043 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 678-828 |
| Cow position: | chr21:23192393-23192547 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 678-829 |
| Cow position: | chr21:20262219-20262367 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 89, 58 |
| Conread position: | 683-827 |
| Cow position: | chr21:44733062-44733203 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 694-820 |
| Cow position: | chr21:12339741-12339612 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 699-828 |
| Cow position: | chr21:18041752-18041881 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 713-828 |
| Cow position: | chr21:41598201-41598085 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 52, 44 |
Show alignments to all cow chromosomes.