Cow genome map
| Conread name: | Ss1.1-Lym2-sn29_A08.f.5 |
| Conread position: | 490-820 |
| Cow position: | chr23:18402039-18402375 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 60 |
| Conread position: | 499-789 |
| Cow position: | chr23:3814053-3814338 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 270, 19 |
| Conread position: | 500-763 |
| Cow position: | chr23:28798301-28798047 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 15, 76 |
| Conread position: | 501-721 |
| Cow position: | chr23:18354881-18354661 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 118, 17 |
| Conread position: | 501-725 |
| Cow position: | chr23:18106734-18106963 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 70, 149 |
| Conread position: | 501-756 |
| Cow position: | chr23:5608846-5609103 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 107, 115 |
| Conread position: | 501-800 |
| Cow position: | chr23:22105790-22105494 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 112 |
| Conread position: | 501-812 |
| Cow position: | chr23:3431294-3430990 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 260, 17 |
| Conread position: | 501-816 |
| Cow position: | chr23:14524205-14523901 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 11, 79 |
| Conread position: | 501-819 |
| Cow position: | chr23:1768061-1767744 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 14, 112 |
| Conread position: | 501-820 |
| Cow position: | chr23:2487761-2488072 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 74, 60 |
| Conread position: | 501-820 |
| Cow position: | chr23:13511961-13511648 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 87, 252 |
| Conread position: | 501-820 |
| Cow position: | chr23:20002491-20002168 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 14, 188 |
| Conread position: | 501-828 |
| Cow position: | chr23:21502399-21502732 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 18 |
| Conread position: | 502-708 |
| Cow position: | chr23:27030514-27030316 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 80 |
| Conread position: | 502-718 |
| Cow position: | chr23:12602229-12602460 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 502-790 |
| Cow position: | chr23:20604478-20604776 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 94 |
| Conread position: | 502-816 |
| Cow position: | chr23:3408680-3408993 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 231 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 162, 112 |
| Conread position: | 505-764 |
| Cow position: | chr23:5449923-5449675 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 505-787 |
| Cow position: | chr23:3244234-3244520 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 255 |
| Conread position: | 505-820 |
| Cow position: | chr23:12334425-12334120 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 266, 54 |
| Conread position: | 505-823 |
| Cow position: | chr23:24927029-24926722 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 252, 45 |
| Conread position: | 505-824 |
| Cow position: | chr23:14164173-14164492 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 185, 66 |
| Conread position: | 505-824 |
| Cow position: | chr23:38454960-38455272 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 132, 96 |
| Conread position: | 506-816 |
| Cow position: | chr23:21439758-21440084 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 235 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 69, 203 |
| Conread position: | 506-821 |
| Cow position: | chr23:30951186-30950871 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 90 |
| Conread position: | 506-825 |
| Cow position: | chr23:20744380-20744683 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 226 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 507-803 |
| Cow position: | chr23:3281909-3282193 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 249, 72 |
| Conread position: | 514-610 |
| Cow position: | chr23:18604926-18605023 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 514-781 |
| Cow position: | chr23:11314823-11315084 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 146, 94 |
| Conread position: | 514-802 |
| Cow position: | chr23:40637458-40637187 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 251, 48 |
| Conread position: | 514-825 |
| Cow position: | chr23:16075941-16076252 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 23 |
| Conread position: | 514-825 |
| Cow position: | chr23:29626620-29626323 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 250, 50 |
| Conread position: | 516-807 |
| Cow position: | chr23:35247575-35247292 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 255, 57 |
| Conread position: | 517-841 |
| Cow position: | chr23:21336278-21336595 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 228, 54 |
| Conread position: | 518-708 |
| Cow position: | chr23:30110056-30109870 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 24 |
| Conread position: | 543-820 |
| Cow position: | chr23:11473314-11473595 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 71 |
| Conread position: | 563-802 |
| Cow position: | chr23:22587050-22586820 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 22, 150 |
| Conread position: | 572-824 |
| Cow position: | chr23:39276051-39275799 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 47, 67 |
| Conread position: | 576-828 |
| Cow position: | chr23:11045642-11045391 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 89, 35 |
| Conread position: | 579-825 |
| Cow position: | chr23:33717391-33717632 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 191, 42 |
| Conread position: | 582-815 |
| Cow position: | chr23:40391625-40391395 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 176, 34 |
| Conread position: | 585-818 |
| Cow position: | chr23:38264386-38264618 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 131, 41 |
| Conread position: | 586-745 |
| Cow position: | chr23:1877747-1877908 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 591-829 |
| Cow position: | chr23:2282041-2282270 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 593-760 |
| Cow position: | chr23:8698558-8698392 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 162, 23 |
| Conread position: | 593-823 |
| Cow position: | chr23:2359020-2358802 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 93, 108 |
| Conread position: | 593-826 |
| Cow position: | chr23:9599631-9599399 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 137, 29 |
| Conread position: | 593-828 |
| Cow position: | chr23:21765059-21764823 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 123, 71 |
| Conread position: | 593-829 |
| Cow position: | chr23:21452590-21452827 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 174, 160 |
| Conread position: | 595-754 |
| Cow position: | chr23:22238684-22238843 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 595-755 |
| Cow position: | chr23:5785980-5785822 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 595-820 |
| Cow position: | chr23:18036522-18036744 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 132, 31 |
| Conread position: | 596-745 |
| Cow position: | chr23:1194355-1194504 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 596-833 |
| Cow position: | chr23:3293829-3293592 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 161, 26 |
| Conread position: | 598-820 |
| Cow position: | chr23:2799718-2799495 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 28, 204 |
| Conread position: | 599-783 |
| Cow position: | chr23:2160508-2160685 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 157, 23 |
| Conread position: | 599-810 |
| Cow position: | chr23:5881388-5881595 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 158, 12 |
| Conread position: | 599-810 |
| Cow position: | chr23:33629059-33628849 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 40, 12 |
| Conread position: | 599-814 |
| Cow position: | chr23:24966328-24966545 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 599-825 |
| Cow position: | chr23:9268713-9268501 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 599-825 |
| Cow position: | chr23:10497828-10497617 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 599-828 |
| Cow position: | chr23:534359-534133 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 599-828 |
| Cow position: | chr23:5426570-5426336 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 601-776 |
| Cow position: | chr23:20093113-20093286 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 164, 39 |
| Conread position: | 601-800 |
| Cow position: | chr23:1981535-1981721 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 168, 12 |
| Conread position: | 601-803 |
| Cow position: | chr23:4470369-4470571 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 165, 24 |
| Conread position: | 601-815 |
| Cow position: | chr23:4646640-4646429 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 163, 21 |
| Conread position: | 601-823 |
| Cow position: | chr23:8917547-8917764 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 165, 56 |
| Conread position: | 601-829 |
| Cow position: | chr23:5540278-5540064 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 602-802 |
| Cow position: | chr23:35965273-35965074 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 160, 14 |
| Conread position: | 602-825 |
| Cow position: | chr23:5451450-5451233 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 125 |
| Conread position: | 602-828 |
| Cow position: | chr23:24867438-24867211 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 155, 30 |
| Conread position: | 603-825 |
| Cow position: | chr23:11212637-11212414 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 603-825 |
| Cow position: | chr23:16582780-16583000 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 49 |
| Conread position: | 603-828 |
| Cow position: | chr23:1776512-1776724 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 16, 53 |
| Conread position: | 603-828 |
| Cow position: | chr23:2501724-2501948 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 35, 42 |
| Conread position: | 605-761 |
| Cow position: | chr23:17231274-17231121 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 605-778 |
| Cow position: | chr23:25990312-25990483 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 161, 17 |
| Conread position: | 605-795 |
| Cow position: | chr23:40995296-40995110 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 159, 17 |
| Conread position: | 605-813 |
| Cow position: | chr23:3967432-3967638 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 105, 155 |
| Conread position: | 605-815 |
| Cow position: | chr23:5707121-5706912 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 605-823 |
| Cow position: | chr23:31493993-31493774 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 605-827 |
| Cow position: | chr23:1701016-1700814 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 606-795 |
| Cow position: | chr23:1614531-1614720 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 75 |
| Conread position: | 606-825 |
| Cow position: | chr23:4959447-4959656 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 87 |
| Conread position: | 606-828 |
| Cow position: | chr23:16881036-16881257 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 607-828 |
| Cow position: | chr23:29034438-29034222 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 160, 22 |
| Conread position: | 611-828 |
| Cow position: | chr23:1876833-1876616 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 614-831 |
| Cow position: | chr23:33711878-33711664 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 615-803 |
| Cow position: | chr23:26841540-26841356 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 149, 77 |
| Conread position: | 616-759 |
| Cow position: | chr23:18605292-18605433 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 616-795 |
| Cow position: | chr23:13202242-13202423 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 150, 41 |
| Conread position: | 616-801 |
| Cow position: | chr23:348831-349018 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 616-803 |
| Cow position: | chr23:16961414-16961226 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 616-814 |
| Cow position: | chr23:3394379-3394576 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 132 |
| Conread position: | 616-816 |
| Cow position: | chr23:18286309-18286109 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 150, 132 |
| Conread position: | 616-819 |
| Cow position: | chr23:17486707-17486912 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 616-820 |
| Cow position: | chr23:18901938-18902134 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 616-828 |
| Cow position: | chr23:1222120-1222334 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 616-828 |
| Cow position: | chr23:5795594-5795383 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 142, 96 |
| Conread position: | 616-828 |
| Cow position: | chr23:17404955-17404744 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 616-828 |
| Cow position: | chr23:26986155-26986366 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 145, 62 |
| Conread position: | 616-832 |
| Cow position: | chr23:29458982-29459189 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 616-843 |
| Cow position: | chr23:3830084-3830308 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 149, 22 |
| Conread position: | 616-843 |
| Cow position: | chr23:16699925-16700149 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 215, 141 |
| Conread position: | 617-793 |
| Cow position: | chr23:35368931-35369105 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 617-795 |
| Cow position: | chr23:1589705-1589524 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 617-797 |
| Cow position: | chr23:19565565-19565385 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 145, 62 |
| Conread position: | 617-820 |
| Cow position: | chr23:1697789-1697590 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 7, 75 |
| Conread position: | 617-824 |
| Cow position: | chr23:6244481-6244676 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 150, 85 |
| Conread position: | 617-824 |
| Cow position: | chr23:40891478-40891269 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 617-828 |
| Cow position: | chr23:1720867-1721079 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 143, 106 |
| Conread position: | 617-828 |
| Cow position: | chr23:1883510-1883299 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 166 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 69, 16 |
| Conread position: | 617-828 |
| Cow position: | chr23:13599456-13599250 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 618-827 |
| Cow position: | chr23:39778517-39778308 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 6, 189 |
| Conread position: | 618-828 |
| Cow position: | chr23:12363503-12363713 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 621-840 |
| Cow position: | chr23:20539498-20539276 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 622-817 |
| Cow position: | chr23:5237309-5237512 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 88, 193 |
| Conread position: | 622-817 |
| Cow position: | chr23:8063654-8063464 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 143, 49 |
| Conread position: | 622-817 |
| Cow position: | chr23:19872572-19872758 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 622-825 |
| Cow position: | chr23:1438403-1438204 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 122, 136 |
| Conread position: | 622-825 |
| Cow position: | chr23:7361218-7361025 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 59, 126 |
| Conread position: | 622-828 |
| Cow position: | chr23:35938456-35938247 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 166, 204 |
| Conread position: | 623-731 |
| Cow position: | chr23:27849106-27848998 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 623-820 |
| Cow position: | chr23:24685353-24685165 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 95, 12 |
| Conread position: | 623-828 |
| Cow position: | chr23:1290407-1290201 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 138, 120 |
| Conread position: | 623-828 |
| Cow position: | chr23:7845403-7845198 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 148, 134 |
| Conread position: | 623-831 |
| Cow position: | chr23:1403696-1403902 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 624-825 |
| Cow position: | chr23:5732659-5732458 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 144, 75 |
| Conread position: | 625-820 |
| Cow position: | chr23:26051146-26050949 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 626-820 |
| Cow position: | chr23:11845382-11845189 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 135, 27 |
| Conread position: | 630-817 |
| Cow position: | chr23:14462613-14462429 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 631-816 |
| Cow position: | chr23:1906144-1905965 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 637-829 |
| Cow position: | chr23:39806965-39806771 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 121, 52 |
| Conread position: | 643-763 |
| Cow position: | chr23:7138257-7138376 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 649-814 |
| Cow position: | chr23:1733244-1733083 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 108, 38 |
| Conread position: | 649-824 |
| Cow position: | chr23:4329591-4329771 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 649-828 |
| Cow position: | chr23:4980463-4980640 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 656-816 |
| Cow position: | chr23:26722051-26721890 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 657-828 |
| Cow position: | chr23:16563914-16563746 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 60, 91 |
| Conread position: | 658-840 |
| Cow position: | chr23:6367685-6367498 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 660-795 |
| Cow position: | chr23:5400739-5400604 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 660-824 |
| Cow position: | chr23:24509766-24509611 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 661-790 |
| Cow position: | chr23:18748992-18749122 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 662-824 |
| Cow position: | chr23:16631340-16631179 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 662-830 |
| Cow position: | chr23:39324232-39324064 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 664-817 |
| Cow position: | chr23:18238458-18238610 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 670-824 |
| Cow position: | chr23:3244851-3245006 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 671-821 |
| Cow position: | chr23:3522812-3522663 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 685-817 |
| Cow position: | chr23:2801635-2801769 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 694-820 |
| Cow position: | chr23:23104678-23104806 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 699-814 |
| Cow position: | chr23:16664536-16664653 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 709-828 |
| Cow position: | chr23:14191578-14191458 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 717-820 |
| Cow position: | chr23:207030-206927 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 100 |
Show alignments to all cow chromosomes.