Cow genome map
| Conread name: | Ss1.1-Lym2-sn29_A08.f.5 |
| Conread position: | 491-741 |
| Cow position: | chr25:15695490-15695253 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 501-601 |
| Cow position: | chr25:13822646-13822547 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 501-701 |
| Cow position: | chr25:32908159-32907965 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 501-800 |
| Cow position: | chr25:19478892-19478602 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 271, 93 |
| Conread position: | 501-818 |
| Cow position: | chr25:11585731-11585428 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 501-820 |
| Cow position: | chr25:10949363-10949675 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 42 |
| Conread position: | 501-823 |
| Cow position: | chr25:30619282-30618970 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 104 |
| Conread position: | 504-818 |
| Cow position: | chr25:6682851-6683151 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 260, 92 |
| Conread position: | 505-815 |
| Cow position: | chr25:30278999-30279296 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 257, 32 |
| Conread position: | 505-815 |
| Cow position: | chr25:33773572-33773866 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 130, 13 |
| Conread position: | 505-815 |
| Cow position: | chr25:34170167-34169862 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 506-743 |
| Cow position: | chr25:15218359-15218121 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 202 |
| Conread position: | 506-755 |
| Cow position: | chr25:30624872-30625110 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 506-794 |
| Cow position: | chr25:36019442-36019733 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 104, 184 |
| Conread position: | 506-823 |
| Cow position: | chr25:36120727-36120408 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 112, 36 |
| Conread position: | 507-759 |
| Cow position: | chr25:9989906-9990141 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 507-829 |
| Cow position: | chr25:13567180-13566862 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 235, 36 |
| Conread position: | 514-790 |
| Cow position: | chr25:35826073-35826349 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 163, 62 |
| Conread position: | 514-803 |
| Cow position: | chr25:22261095-22261372 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 158 |
| Conread position: | 514-810 |
| Cow position: | chr25:40931508-40931194 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 52, 212 |
| Conread position: | 514-815 |
| Cow position: | chr25:7008109-7007823 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 241, 58 |
| Conread position: | 514-816 |
| Cow position: | chr25:7799741-7799466 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 9, 24 |
| Conread position: | 514-816 |
| Cow position: | chr25:26052121-26051814 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 61, 118 |
| Conread position: | 517-695 |
| Cow position: | chr25:10497456-10497275 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 92, 111 |
| Conread position: | 517-708 |
| Cow position: | chr25:36135928-36136120 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 518-814 |
| Cow position: | chr25:7013517-7013813 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 98, 126 |
| Conread position: | 526-820 |
| Cow position: | chr25:22750803-22751100 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 17, 88 |
| Conread position: | 560-763 |
| Cow position: | chr25:15463751-15463552 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 576-824 |
| Cow position: | chr25:17342617-17342361 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 579-824 |
| Cow position: | chr25:21245459-21245698 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 582-827 |
| Cow position: | chr25:22315349-22315101 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 176, 34 |
| Conread position: | 585-824 |
| Cow position: | chr25:26134184-26133946 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 98, 41 |
| Conread position: | 585-828 |
| Cow position: | chr25:17566730-17566489 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 31 |
| Conread position: | 588-820 |
| Cow position: | chr25:36872498-36872271 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 591-745 |
| Cow position: | chr25:3744609-3744762 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 593-766 |
| Cow position: | chr25:18929057-18929230 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 593-820 |
| Cow position: | chr25:22179047-22178830 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 593-821 |
| Cow position: | chr25:16921663-16921883 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 594-773 |
| Cow position: | chr25:26238995-26238813 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 116, 29 |
| Conread position: | 594-828 |
| Cow position: | chr25:20785457-20785684 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 595-806 |
| Cow position: | chr25:23505185-23504970 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 595-828 |
| Cow position: | chr25:9843307-9843077 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 161, 27 |
| Conread position: | 595-832 |
| Cow position: | chr25:7673434-7673189 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 110, 231 |
| Conread position: | 596-752 |
| Cow position: | chr25:36873202-36873357 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 596-815 |
| Cow position: | chr25:7750584-7750364 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 596-825 |
| Cow position: | chr25:34978733-34978963 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 171, 21 |
| Conread position: | 596-828 |
| Cow position: | chr25:24669317-24669535 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 599-728 |
| Cow position: | chr25:1802739-1802607 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 116, 22 |
| Conread position: | 599-769 |
| Cow position: | chr25:18288642-18288810 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 158, 12 |
| Conread position: | 599-790 |
| Cow position: | chr25:40682867-40682677 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 111 |
| Conread position: | 599-809 |
| Cow position: | chr25:3992908-3992703 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 125, 96 |
| Conread position: | 599-814 |
| Cow position: | chr25:15715002-15714788 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 599-814 |
| Cow position: | chr25:36746320-36746533 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 19, 59 |
| Conread position: | 599-815 |
| Cow position: | chr25:20523108-20523322 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 169, 23 |
| Conread position: | 599-815 |
| Cow position: | chr25:23745387-23745171 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 98, 23 |
| Conread position: | 599-819 |
| Cow position: | chr25:19363932-19364150 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 599-820 |
| Cow position: | chr25:2624922-2624718 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 599-824 |
| Cow position: | chr25:20008262-20008040 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 115, 163 |
| Conread position: | 599-825 |
| Cow position: | chr25:23244876-23245098 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 599-825 |
| Cow position: | chr25:41150836-41151056 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 44, 145 |
| Conread position: | 599-828 |
| Cow position: | chr25:11432818-11433052 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 18 |
| Conread position: | 599-828 |
| Cow position: | chr25:26679355-26679129 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 599-830 |
| Cow position: | chr25:21192813-21193035 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 172, 17 |
| Conread position: | 600-820 |
| Cow position: | chr25:7216952-7216740 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 166, 96 |
| Conread position: | 600-824 |
| Cow position: | chr25:10217921-10218142 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 26 |
| Conread position: | 601-796 |
| Cow position: | chr25:1840449-1840254 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 155, 21 |
| Conread position: | 601-828 |
| Cow position: | chr25:33550639-33550409 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 601-843 |
| Cow position: | chr25:13272695-13272453 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 172, 20 |
| Conread position: | 602-820 |
| Cow position: | chr25:22341652-22341436 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 73 |
| Conread position: | 602-829 |
| Cow position: | chr25:6928382-6928608 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 603-763 |
| Cow position: | chr25:13223026-13222865 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 603-843 |
| Cow position: | chr25:13443285-13443529 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 83, 136 |
| Conread position: | 605-765 |
| Cow position: | chr25:9107402-9107560 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 605-771 |
| Cow position: | chr25:28597487-28597655 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 605-795 |
| Cow position: | chr25:15273796-15273607 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 605-795 |
| Cow position: | chr25:26306083-26306272 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 605-813 |
| Cow position: | chr25:17190626-17190829 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 159, 16 |
| Conread position: | 605-820 |
| Cow position: | chr25:12609463-12609254 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 162, 87 |
| Conread position: | 605-824 |
| Cow position: | chr25:28187822-28188041 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 161, 133 |
| Conread position: | 605-825 |
| Cow position: | chr25:19129976-19129757 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 187, 33 |
| Conread position: | 605-828 |
| Cow position: | chr25:22531404-22531186 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 159, 108 |
| Conread position: | 605-840 |
| Cow position: | chr25:36555566-36555801 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 224, 138 |
| Conread position: | 606-795 |
| Cow position: | chr25:12116877-12117068 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 606-828 |
| Cow position: | chr25:11661696-11661915 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 33, 15 |
| Conread position: | 612-815 |
| Cow position: | chr25:4681342-4681145 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 154, 32 |
| Conread position: | 616-731 |
| Cow position: | chr25:34967397-34967512 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 616-794 |
| Cow position: | chr25:6133979-6134157 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 144, 68 |
| Conread position: | 616-794 |
| Cow position: | chr25:38958067-38957896 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 616-803 |
| Cow position: | chr25:11276664-11276478 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 25, 138 |
| Conread position: | 616-804 |
| Cow position: | chr25:7379035-7379225 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 144, 172 |
| Conread position: | 616-815 |
| Cow position: | chr25:13621247-13621445 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 142, 41 |
| Conread position: | 616-821 |
| Cow position: | chr25:21893450-21893244 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 616-823 |
| Cow position: | chr25:4948074-4947869 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 148, 165 |
| Conread position: | 616-823 |
| Cow position: | chr25:15254236-15254427 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 616-828 |
| Cow position: | chr25:4521729-4521933 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 616-828 |
| Cow position: | chr25:20023274-20023488 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 616-828 |
| Cow position: | chr25:23829018-23829227 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 146, 15 |
| Conread position: | 617-824 |
| Cow position: | chr25:14791865-14791659 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 152, 75 |
| Conread position: | 618-772 |
| Cow position: | chr25:22348353-22348507 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 618-814 |
| Cow position: | chr25:27531160-27531359 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 618-819 |
| Cow position: | chr25:12509901-12510101 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 618-824 |
| Cow position: | chr25:36081985-36081782 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 618-827 |
| Cow position: | chr25:33457843-33457632 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 618-828 |
| Cow position: | chr25:21668359-21668147 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 618-830 |
| Cow position: | chr25:19679464-19679243 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 144, 13 |
| Conread position: | 621-815 |
| Cow position: | chr25:18721013-18721206 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 124, 112 |
| Conread position: | 621-827 |
| Cow position: | chr25:21191596-21191389 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 161 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 621-830 |
| Cow position: | chr25:11051636-11051427 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 145, 81 |
| Conread position: | 622-773 |
| Cow position: | chr25:18810449-18810297 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 622-827 |
| Cow position: | chr25:11436701-11436908 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 622-859 |
| Cow position: | chr25:10156675-10156447 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 22 |
| Conread position: | 623-815 |
| Cow position: | chr25:17975273-17975459 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 147, 122 |
| Conread position: | 623-825 |
| Cow position: | chr25:6961048-6961250 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 143, 154 |
| Conread position: | 623-828 |
| Cow position: | chr25:8120885-8120682 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 144, 57 |
| Conread position: | 623-828 |
| Cow position: | chr25:14157730-14157522 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 623-828 |
| Cow position: | chr25:25051272-25051479 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 624-825 |
| Cow position: | chr25:26089709-26089910 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 133, 108 |
| Conread position: | 625-803 |
| Cow position: | chr25:14720847-14720672 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 626-841 |
| Cow position: | chr25:36036677-36036893 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 131, 167 |
| Conread position: | 629-818 |
| Cow position: | chr25:16319041-16319228 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 141, 164 |
| Conread position: | 631-790 |
| Cow position: | chr25:13768067-13767908 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 133, 40 |
| Conread position: | 631-823 |
| Cow position: | chr25:14809370-14809186 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 632-759 |
| Cow position: | chr25:37606457-37606330 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 644-828 |
| Cow position: | chr25:14118175-14117994 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 121, 32 |
| Conread position: | 649-819 |
| Cow position: | chr25:15377405-15377236 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 119, 44 |
| Conread position: | 650-824 |
| Cow position: | chr25:6688023-6687852 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 110, 57 |
| Conread position: | 652-824 |
| Cow position: | chr25:11066067-11066240 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 64, 79 |
| Conread position: | 655-828 |
| Cow position: | chr25:30816962-30816787 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 660-818 |
| Cow position: | chr25:24052034-24051874 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 107, 140 |
| Conread position: | 661-829 |
| Cow position: | chr25:35347970-35347808 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 664-828 |
| Cow position: | chr25:5921008-5920842 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 60, 67 |
| Conread position: | 664-828 |
| Cow position: | chr25:7035620-7035456 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 148, 93 |
| Conread position: | 664-828 |
| Cow position: | chr25:9316086-9315922 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 53, 69 |
| Conread position: | 664-828 |
| Cow position: | chr25:33959188-33959352 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 111 |
| Conread position: | 664-841 |
| Cow position: | chr25:20133250-20133425 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 165, 92 |
| Conread position: | 666-828 |
| Cow position: | chr25:16570664-16570513 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 68, 33 |
| Conread position: | 668-828 |
| Cow position: | chr25:26642647-26642485 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 669-828 |
| Cow position: | chr25:7449859-7449708 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 692-829 |
| Cow position: | chr25:20211044-20211180 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 707-821 |
| Cow position: | chr25:35902536-35902421 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
Show alignments to all cow chromosomes.