Cow genome map
| Conread name: | Ss1.1-Lym2-sn29_A08.f.5 |
| Conread position: | 494-815 |
| Cow position: | chr27:4720381-4720072 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 281, 43 |
| Conread position: | 500-795 |
| Cow position: | chr27:591019-590740 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 16, 84 |
| Conread position: | 501-593 |
| Cow position: | chr27:31183324-31183415 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 79 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 501-610 |
| Cow position: | chr27:25794950-25794842 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 501-781 |
| Cow position: | chr27:20485798-20486065 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 219, 17 |
| Conread position: | 501-793 |
| Cow position: | chr27:237004-237288 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 501-820 |
| Cow position: | chr27:23482939-23483272 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 73, 17 |
| Conread position: | 501-824 |
| Cow position: | chr27:26413527-26413204 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 11, 121 |
| Conread position: | 501-824 |
| Cow position: | chr27:30988524-30988845 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 15, 74 |
| Conread position: | 501-828 |
| Cow position: | chr27:23510728-23511043 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 264, 17 |
| Conread position: | 501-830 |
| Cow position: | chr27:20628811-20629118 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 37, 107 |
| Conread position: | 501-831 |
| Cow position: | chr27:18767330-18767009 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 114 |
| Conread position: | 501-843 |
| Cow position: | chr27:7212978-7212643 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 72 |
| Conread position: | 502-672 |
| Cow position: | chr27:30803936-30804100 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 38 |
| Conread position: | 502-820 |
| Cow position: | chr27:6014924-6015245 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 119, 299 |
| Conread position: | 502-824 |
| Cow position: | chr27:15214947-15215282 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 86, 238 |
| Conread position: | 502-824 |
| Cow position: | chr27:30868999-30868691 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 10, 91 |
| Conread position: | 502-828 |
| Cow position: | chr27:19717652-19717975 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 237, 16 |
| Conread position: | 505-803 |
| Cow position: | chr27:20758294-20758016 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 505-820 |
| Cow position: | chr27:16780616-16780913 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 261, 24 |
| Conread position: | 505-824 |
| Cow position: | chr27:27641279-27640953 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 506-778 |
| Cow position: | chr27:20275308-20275596 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 118, 267 |
| Conread position: | 506-808 |
| Cow position: | chr27:15343546-15343247 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 111, 15 |
| Conread position: | 506-828 |
| Cow position: | chr27:22455033-22454725 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 507-824 |
| Cow position: | chr27:815090-815415 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 8, 247 |
| Conread position: | 508-814 |
| Cow position: | chr27:20795530-20795832 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 129, 33 |
| Conread position: | 511-824 |
| Cow position: | chr27:7731512-7731202 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 262, 61 |
| Conread position: | 513-760 |
| Cow position: | chr27:16589959-16589716 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 514-711 |
| Cow position: | chr27:26321438-26321639 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 105, 66 |
| Conread position: | 514-812 |
| Cow position: | chr27:20517417-20517696 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 42, 64 |
| Conread position: | 514-828 |
| Cow position: | chr27:30407282-30406984 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 38, 62 |
| Conread position: | 517-760 |
| Cow position: | chr27:30489660-30489424 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 28, 56 |
| Conread position: | 517-803 |
| Cow position: | chr27:18826295-18826581 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 68, 131 |
| Conread position: | 517-824 |
| Cow position: | chr27:27270800-27270493 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 126, 94 |
| Conread position: | 517-828 |
| Cow position: | chr27:28467701-28467397 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 271, 56 |
| Conread position: | 518-820 |
| Cow position: | chr27:435001-435280 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 246, 57 |
| Conread position: | 518-824 |
| Cow position: | chr27:16088560-16088858 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 187, 54 |
| Conread position: | 520-828 |
| Cow position: | chr27:27695004-27694718 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 544-798 |
| Cow position: | chr27:30846425-30846682 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 57, 177 |
| Conread position: | 544-824 |
| Cow position: | chr27:8942919-8942634 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 40, 60 |
| Conread position: | 544-825 |
| Cow position: | chr27:29261571-29261283 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 82, 127 |
| Conread position: | 560-754 |
| Cow position: | chr27:22179976-22179789 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 572-741 |
| Cow position: | chr27:11466663-11466498 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 578-825 |
| Cow position: | chr27:14670578-14670334 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 7, 44 |
| Conread position: | 580-788 |
| Cow position: | chr27:22348296-22348500 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 126, 117 |
| Conread position: | 586-828 |
| Cow position: | chr27:21669302-21669070 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 587-824 |
| Cow position: | chr27:31018008-31017785 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 589-828 |
| Cow position: | chr27:19685896-19685658 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 15 |
| Conread position: | 593-790 |
| Cow position: | chr27:19508834-19509030 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 169, 29 |
| Conread position: | 595-828 |
| Cow position: | chr27:28271329-28271098 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 595-843 |
| Cow position: | chr27:27389201-27388949 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 124, 29 |
| Conread position: | 596-810 |
| Cow position: | chr27:23560210-23559995 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 27, 162 |
| Conread position: | 596-815 |
| Cow position: | chr27:28206623-28206840 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 111 |
| Conread position: | 599-728 |
| Cow position: | chr27:11133914-11134040 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 599-758 |
| Cow position: | chr27:15003153-15002994 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 599-794 |
| Cow position: | chr27:29597921-29597731 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 162, 8 |
| Conread position: | 599-815 |
| Cow position: | chr27:23594147-23594362 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 63, 58 |
| Conread position: | 599-818 |
| Cow position: | chr27:20068148-20067933 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 154, 22 |
| Conread position: | 599-820 |
| Cow position: | chr27:26865282-26865075 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 599-824 |
| Cow position: | chr27:8168605-8168382 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 47 |
| Conread position: | 599-828 |
| Cow position: | chr27:16103637-16103861 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 599-829 |
| Cow position: | chr27:26238850-26239079 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 21, 46 |
| Conread position: | 600-764 |
| Cow position: | chr27:7412221-7412383 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 600-794 |
| Cow position: | chr27:12459117-12459304 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 56, 22 |
| Conread position: | 600-797 |
| Cow position: | chr27:20897193-20897001 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 157, 16 |
| Conread position: | 600-819 |
| Cow position: | chr27:26999597-26999375 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 601-786 |
| Cow position: | chr27:31210376-31210559 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 165, 43 |
| Conread position: | 601-816 |
| Cow position: | chr27:27632769-27632565 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 601-824 |
| Cow position: | chr27:426796-427017 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 23, 99 |
| Conread position: | 601-825 |
| Cow position: | chr27:27460744-27460525 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 16, 70 |
| Conread position: | 601-828 |
| Cow position: | chr27:26643519-26643733 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 162, 15 |
| Conread position: | 601-831 |
| Cow position: | chr27:23108074-23107843 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 11, 109 |
| Conread position: | 602-820 |
| Cow position: | chr27:22418937-22418722 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 168, 19 |
| Conread position: | 602-823 |
| Cow position: | chr27:4672842-4673067 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 602-828 |
| Cow position: | chr27:23452292-23452512 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 603-813 |
| Cow position: | chr27:16705080-16705290 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 165, 144 |
| Conread position: | 603-818 |
| Cow position: | chr27:29431300-29431501 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 603-820 |
| Cow position: | chr27:23485044-23485258 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 152, 19 |
| Conread position: | 603-820 |
| Cow position: | chr27:26226462-26226245 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 43 |
| Conread position: | 603-827 |
| Cow position: | chr27:15865436-15865663 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 603-828 |
| Cow position: | chr27:17397625-17397398 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 604-814 |
| Cow position: | chr27:20812735-20812950 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 184, 0 |
| Conread position: | 605-758 |
| Cow position: | chr27:7343597-7343444 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 33 |
| Conread position: | 605-823 |
| Cow position: | chr27:15378640-15378430 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 160, 12 |
| Conread position: | 605-828 |
| Cow position: | chr27:15454044-15454264 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 605-828 |
| Cow position: | chr27:22035547-22035324 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 19, 147 |
| Conread position: | 606-787 |
| Cow position: | chr27:28478414-28478594 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 156, 20 |
| Conread position: | 606-825 |
| Cow position: | chr27:16478504-16478289 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 150, 86 |
| Conread position: | 612-831 |
| Cow position: | chr27:24321026-24321243 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 58 |
| Conread position: | 614-835 |
| Cow position: | chr27:25721110-25720880 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 5, 71 |
| Conread position: | 616-773 |
| Cow position: | chr27:27055131-27055285 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 616-818 |
| Cow position: | chr27:29593786-29593585 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 616-824 |
| Cow position: | chr27:27038995-27038791 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 131, 72 |
| Conread position: | 616-825 |
| Cow position: | chr27:31148604-31148811 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 616-828 |
| Cow position: | chr27:4813038-4812827 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 145, 10 |
| Conread position: | 616-828 |
| Cow position: | chr27:17331345-17331552 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 142, 28 |
| Conread position: | 616-828 |
| Cow position: | chr27:22171142-22171353 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 151, 76 |
| Conread position: | 616-828 |
| Cow position: | chr27:29504805-29504593 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 141, 13 |
| Conread position: | 617-820 |
| Cow position: | chr27:299537-299338 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 169, 82 |
| Conread position: | 617-828 |
| Cow position: | chr27:4944671-4944465 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 97, 89 |
| Conread position: | 617-828 |
| Cow position: | chr27:20828866-20828657 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 145, 21 |
| Conread position: | 618-799 |
| Cow position: | chr27:20641489-20641309 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 135, 29 |
| Conread position: | 618-815 |
| Cow position: | chr27:15409192-15408994 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 618-828 |
| Cow position: | chr27:8405978-8405772 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 27 |
| Conread position: | 618-828 |
| Cow position: | chr27:24738955-24738738 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 13 |
| Conread position: | 622-812 |
| Cow position: | chr27:4835759-4835566 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 622-824 |
| Cow position: | chr27:1122880-1123080 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 622-828 |
| Cow position: | chr27:22386723-22386923 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 146, 100 |
| Conread position: | 622-828 |
| Cow position: | chr27:22569633-22569825 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 623-803 |
| Cow position: | chr27:20092985-20092801 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 623-815 |
| Cow position: | chr27:16284325-16284515 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 129, 15 |
| Conread position: | 623-821 |
| Cow position: | chr27:8353328-8353520 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 623-824 |
| Cow position: | chr27:23890787-23890988 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 153, 135 |
| Conread position: | 623-828 |
| Cow position: | chr27:19387868-19388067 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 623-834 |
| Cow position: | chr27:24440373-24440168 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 625-817 |
| Cow position: | chr27:26150869-26151063 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 83, 175 |
| Conread position: | 625-828 |
| Cow position: | chr27:19660783-19660988 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 626-828 |
| Cow position: | chr27:20553584-20553773 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 626-829 |
| Cow position: | chr27:26407307-26407111 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 631-759 |
| Cow position: | chr27:788940-788812 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 631-824 |
| Cow position: | chr27:1498172-1498366 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 25, 77 |
| Conread position: | 644-825 |
| Cow position: | chr27:16625770-16625948 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 150 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 648-824 |
| Cow position: | chr27:21975927-21976098 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 649-820 |
| Cow position: | chr27:30550865-30551042 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 54 |
| Conread position: | 649-824 |
| Cow position: | chr27:22225717-22225546 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 657-808 |
| Cow position: | chr27:23472142-23472289 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 657-810 |
| Cow position: | chr27:21130189-21130344 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 43, 39 |
| Conread position: | 657-815 |
| Cow position: | chr27:31231198-31231047 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 661-827 |
| Cow position: | chr27:10979750-10979915 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 664-825 |
| Cow position: | chr27:30890181-30890337 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 666-821 |
| Cow position: | chr27:4829920-4829755 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 668-825 |
| Cow position: | chr27:30804237-30804390 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 99, 24 |
| Conread position: | 669-828 |
| Cow position: | chr27:20789484-20789324 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 93, 135 |
| Conread position: | 673-823 |
| Cow position: | chr27:24306728-24306876 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 93, 19 |
Show alignments to all cow chromosomes.