Cow genome map
| Conread name: | Ss1.1-Lym2-sn29_A08.f.5 |
| Conread position: | 501-768 |
| Cow position: | chr28:9705865-9705621 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 48, 75 |
| Conread position: | 501-781 |
| Cow position: | chr28:4873114-4873393 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 11, 79 |
| Conread position: | 501-820 |
| Cow position: | chr28:26220489-26220172 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 87, 116 |
| Conread position: | 501-828 |
| Cow position: | chr28:4159172-4158867 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 502-795 |
| Cow position: | chr28:20759484-20759760 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 10, 39 |
| Conread position: | 503-823 |
| Cow position: | chr28:27161092-27161414 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 23, 76 |
| Conread position: | 505-695 |
| Cow position: | chr28:23641034-23641225 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 505-725 |
| Cow position: | chr28:19024654-19024443 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 505-824 |
| Cow position: | chr28:33052265-33051941 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 10, 32 |
| Conread position: | 505-828 |
| Cow position: | chr28:15043635-15043953 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 94, 46 |
| Conread position: | 506-831 |
| Cow position: | chr28:2960612-2960926 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 229 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 210, 31 |
| Conread position: | 510-824 |
| Cow position: | chr28:25806796-25806485 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 127, 9 |
| Conread position: | 514-814 |
| Cow position: | chr28:16110164-16109859 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 100, 28 |
| Conread position: | 514-828 |
| Cow position: | chr28:13232890-13233200 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 77, 195 |
| Conread position: | 517-824 |
| Cow position: | chr28:2752283-2752582 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 26 |
| Conread position: | 517-824 |
| Cow position: | chr28:8021876-8022197 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 50, 25 |
| Conread position: | 517-828 |
| Cow position: | chr28:12964775-12964478 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 244, 80 |
| Conread position: | 518-820 |
| Cow position: | chr28:12619797-12619485 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 224 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 58, 23 |
| Conread position: | 523-803 |
| Cow position: | chr28:29434220-29434499 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 255, 88 |
| Conread position: | 573-824 |
| Cow position: | chr28:19025845-19026099 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 184, 49 |
| Conread position: | 579-824 |
| Cow position: | chr28:20313433-20313188 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 580-739 |
| Cow position: | chr28:30902278-30902122 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 580-815 |
| Cow position: | chr28:6971193-6971429 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 580-820 |
| Cow position: | chr28:4071120-4070886 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 7, 43 |
| Conread position: | 585-824 |
| Cow position: | chr28:17071485-17071246 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 179, 32 |
| Conread position: | 586-828 |
| Cow position: | chr28:5684852-5684619 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 34, 53 |
| Conread position: | 590-825 |
| Cow position: | chr28:2863013-2862777 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 167, 193 |
| Conread position: | 593-766 |
| Cow position: | chr28:12991280-12991105 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 117, 18 |
| Conread position: | 593-767 |
| Cow position: | chr28:6975379-6975209 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 593-818 |
| Cow position: | chr28:5138854-5139078 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 169, 55 |
| Conread position: | 593-825 |
| Cow position: | chr28:25057104-25056882 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 593-828 |
| Cow position: | chr28:5577672-5577434 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 31, 149 |
| Conread position: | 594-828 |
| Cow position: | chr28:28164224-28163995 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 172, 29 |
| Conread position: | 595-759 |
| Cow position: | chr28:17739960-17739801 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 595-825 |
| Cow position: | chr28:22346160-22345931 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 166, 28 |
| Conread position: | 596-794 |
| Cow position: | chr28:16346394-16346590 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 596-815 |
| Cow position: | chr28:25596765-25596548 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 136, 26 |
| Conread position: | 596-818 |
| Cow position: | chr28:12070368-12070154 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 168, 30 |
| Conread position: | 596-828 |
| Cow position: | chr28:4884111-4884354 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 146 |
| Conread position: | 599-744 |
| Cow position: | chr28:7557599-7557743 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 599-746 |
| Cow position: | chr28:4364690-4364833 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 599-759 |
| Cow position: | chr28:10775576-10775737 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 107, 22 |
| Conread position: | 599-761 |
| Cow position: | chr28:7131956-7132112 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 599-795 |
| Cow position: | chr28:3445345-3445541 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 599-795 |
| Cow position: | chr28:16210966-16211162 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 167, 32 |
| Conread position: | 599-804 |
| Cow position: | chr28:4013218-4013019 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 599-814 |
| Cow position: | chr28:33884535-33884325 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 167, 17 |
| Conread position: | 599-820 |
| Cow position: | chr28:4045980-4045769 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 599-820 |
| Cow position: | chr28:7350788-7350574 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 599-820 |
| Cow position: | chr28:8787674-8787456 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 173 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 164, 24 |
| Conread position: | 599-820 |
| Cow position: | chr28:21868592-21868372 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 599-823 |
| Cow position: | chr28:26982602-26982823 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 599-824 |
| Cow position: | chr28:27218458-27218237 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 59 |
| Conread position: | 599-825 |
| Cow position: | chr28:22332666-22332447 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 26, 134 |
| Conread position: | 599-828 |
| Cow position: | chr28:4089924-4090139 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 78, 23 |
| Conread position: | 599-828 |
| Cow position: | chr28:4834707-4834933 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 35, 60 |
| Conread position: | 599-828 |
| Cow position: | chr28:13474435-13474209 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 599-828 |
| Cow position: | chr28:14998204-14997973 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 38 |
| Conread position: | 599-828 |
| Cow position: | chr28:25129019-25128792 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 166, 18 |
| Conread position: | 599-829 |
| Cow position: | chr28:20124917-20124691 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 101, 30 |
| Conread position: | 599-830 |
| Cow position: | chr28:4182137-4181910 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 600-840 |
| Cow position: | chr28:3741011-3740781 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 601-767 |
| Cow position: | chr28:5255006-5254843 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 601-790 |
| Cow position: | chr28:9684203-9684386 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 601-813 |
| Cow position: | chr28:16919037-16919242 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 601-815 |
| Cow position: | chr28:21845089-21844875 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 166, 16 |
| Conread position: | 601-816 |
| Cow position: | chr28:3492652-3492864 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 171, 21 |
| Conread position: | 601-819 |
| Cow position: | chr28:10863660-10863869 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 165, 21 |
| Conread position: | 601-820 |
| Cow position: | chr28:11422682-11422899 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 169, 91 |
| Conread position: | 601-827 |
| Cow position: | chr28:24082405-24082174 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 24, 222 |
| Conread position: | 601-828 |
| Cow position: | chr28:5204329-5204101 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 601-828 |
| Cow position: | chr28:16369949-16370167 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 602-828 |
| Cow position: | chr28:11752008-11752232 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 153, 9 |
| Conread position: | 603-744 |
| Cow position: | chr28:8396465-8396326 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 603-756 |
| Cow position: | chr28:8304377-8304226 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 113, 13 |
| Conread position: | 603-779 |
| Cow position: | chr28:7498015-7498192 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 603-808 |
| Cow position: | chr28:3023782-3023987 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 154, 42 |
| Conread position: | 603-810 |
| Cow position: | chr28:4016661-4016459 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 21, 13 |
| Conread position: | 603-820 |
| Cow position: | chr28:8140612-8140399 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 603-828 |
| Cow position: | chr28:3746332-3746114 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 107, 8 |
| Conread position: | 603-828 |
| Cow position: | chr28:30937541-30937754 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 159, 19 |
| Conread position: | 604-764 |
| Cow position: | chr28:11816537-11816696 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 153, 13 |
| Conread position: | 605-789 |
| Cow position: | chr28:777805-777619 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 45, 16 |
| Conread position: | 605-812 |
| Cow position: | chr28:9636329-9636532 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 192, 17 |
| Conread position: | 605-816 |
| Cow position: | chr28:2131796-2132002 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 605-824 |
| Cow position: | chr28:26743756-26743536 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 46 |
| Conread position: | 605-828 |
| Cow position: | chr28:12430734-12430516 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 142, 33 |
| Conread position: | 606-828 |
| Cow position: | chr28:11079429-11079215 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 614-828 |
| Cow position: | chr28:9285256-9285465 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 158, 69 |
| Conread position: | 616-790 |
| Cow position: | chr28:4438831-4438656 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 616-795 |
| Cow position: | chr28:7619031-7619211 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 616-797 |
| Cow position: | chr28:26531160-26531342 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 151, 21 |
| Conread position: | 616-814 |
| Cow position: | chr28:6059351-6059548 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 616-815 |
| Cow position: | chr28:11348541-11348351 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 616-823 |
| Cow position: | chr28:10588903-10589109 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 143, 31 |
| Conread position: | 616-824 |
| Cow position: | chr28:4881121-4881324 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 616-824 |
| Cow position: | chr28:23410204-23410412 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 79, 142 |
| Conread position: | 616-828 |
| Cow position: | chr28:3914836-3914620 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 616-828 |
| Cow position: | chr28:11426424-11426633 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 617-727 |
| Cow position: | chr28:9109333-9109224 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 617-795 |
| Cow position: | chr28:10977959-10977784 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 617-814 |
| Cow position: | chr28:19564112-19564307 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 140, 12 |
| Conread position: | 617-820 |
| Cow position: | chr28:11585084-11585288 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 617-828 |
| Cow position: | chr28:7865447-7865233 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 617-828 |
| Cow position: | chr28:16245947-16246154 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 153, 76 |
| Conread position: | 617-828 |
| Cow position: | chr28:33163348-33163555 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 145, 12 |
| Conread position: | 617-829 |
| Cow position: | chr28:10172299-10172506 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 617-830 |
| Cow position: | chr28:7927292-7927081 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 164, 53 |
| Conread position: | 618-828 |
| Cow position: | chr28:11884403-11884611 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 6, 126 |
| Conread position: | 621-820 |
| Cow position: | chr28:30326977-30327174 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 622-788 |
| Cow position: | chr28:2762308-2762142 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 622-802 |
| Cow position: | chr28:3410871-3411057 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 622-815 |
| Cow position: | chr28:18591383-18591189 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 135, 70 |
| Conread position: | 622-828 |
| Cow position: | chr28:3169076-3169286 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 132, 101 |
| Conread position: | 622-828 |
| Cow position: | chr28:11527146-11527350 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 150, 66 |
| Conread position: | 622-829 |
| Cow position: | chr28:16204220-16204421 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 6, 136 |
| Conread position: | 623-808 |
| Cow position: | chr28:4179663-4179482 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 142, 81 |
| Conread position: | 623-827 |
| Cow position: | chr28:32365955-32365752 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 131, 8 |
| Conread position: | 623-828 |
| Cow position: | chr28:14649453-14649257 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 135, 8 |
| Conread position: | 625-809 |
| Cow position: | chr28:22813368-22813188 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 134, 71 |
| Conread position: | 625-813 |
| Cow position: | chr28:5128618-5128808 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 36, 82 |
| Conread position: | 625-824 |
| Cow position: | chr28:30746619-30746815 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 16, 134 |
| Conread position: | 625-825 |
| Cow position: | chr28:1099554-1099748 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 142, 85 |
| Conread position: | 625-843 |
| Cow position: | chr28:29416607-29416825 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 127, 70 |
| Conread position: | 626-823 |
| Cow position: | chr28:23007621-23007820 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 628-818 |
| Cow position: | chr28:4809886-4809706 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 164, 119 |
| Conread position: | 631-824 |
| Cow position: | chr28:26922264-26922454 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 631-825 |
| Cow position: | chr28:24018088-24017910 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 635-828 |
| Cow position: | chr28:18186656-18186463 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 127, 106 |
| Conread position: | 650-824 |
| Cow position: | chr28:21598167-21598341 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 652-820 |
| Cow position: | chr28:4536542-4536373 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 47, 109 |
| Conread position: | 657-824 |
| Cow position: | chr28:21380959-21380791 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 110, 100 |
| Conread position: | 660-820 |
| Cow position: | chr28:5074433-5074593 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 97, 57 |
| Conread position: | 660-828 |
| Cow position: | chr28:10533860-10534025 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 661-823 |
| Cow position: | chr28:12363083-12363247 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 661-824 |
| Cow position: | chr28:10745288-10745125 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 68, 77 |
| Conread position: | 666-820 |
| Cow position: | chr28:7548989-7549143 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 669-828 |
| Cow position: | chr28:4588163-4588008 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 673-814 |
| Cow position: | chr28:7751239-7751380 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 88, 26 |
| Conread position: | 675-828 |
| Cow position: | chr28:3256858-3256706 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 687-828 |
| Cow position: | chr28:5904780-5904641 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 706-824 |
| Cow position: | chr28:7607947-7608067 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 716-829 |
| Cow position: | chr28:10762680-10762567 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.