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Cow genome map

           
Conread name:
           
Ss1.1-Lym2-sn55_A01.f.5
        

               
Conread position:
               
1-174
               

               
Cow position:
               
chr27:27531922-27532098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr27:26323240-26323411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr27:6674066-6674252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr27:30489629-30489430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr27:20485843-20486065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr27:237050-237288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
37, 117
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr27:20517450-20517696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 64
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr27:18767284-18767021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
68, 183
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr27:4720331-4720072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
39, 136
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr27:23108104-23107858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
200, 28
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr27:16088589-16088883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
46, 86
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr27:590971-590687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
190, 38
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr27:15378686-15378396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
206, 24
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr27:23510773-23511084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 54
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr27:27694977-27694662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 28
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr27:28245579-28245915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 200
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr27:19500438-19500092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
291, 25
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr27:17331290-17331642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 63
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr27:7649793-7649436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
93, 8
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr27:28467671-28467291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 150
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr27:23890731-23891093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 28
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr27:11480840-11480470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
195, 24
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr27:16780656-16781025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 14
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr27:19496677-19497047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr27:27245566-27245149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 52
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr27:10307505-10307078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr27:27204639-27204212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
125, 27
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr27:4390461-4390033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
93, 28
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr27:22220348-22220796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 40
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr27:27389229-27388786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 37
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr27:18507445-18507889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
411, 33
               

               
Conread position:
               
1-478
               

               
Cow position:
               
chr27:28922097-28921641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 28
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr27:26434015-26433530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 33
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr27:27460780-27460296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr27:815132-815661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 361
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr27:7212932-7212426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 277
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr27:8630075-8629578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 12
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr27:10582166-10582659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr27:19717696-19718212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 187
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr27:20628858-20629324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
446, 28
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr27:20758252-20757762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 107
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr27:26424778-26424293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 28
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr27:26999625-26999129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 20
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr27:29798750-29799238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
213, 18
               

               
Conread position:
               
2-196
               

               
Cow position:
               
chr27:12710039-12710229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
122, 60
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr27:13318178-13317669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 27
               

               
Conread position:
               
4-187
               

               
Cow position:
               
chr27:789009-788826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
5-281
               

               
Cow position:
               
chr27:22489074-22489342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
194, 24
               

               
Conread position:
               
5-337
               

               
Cow position:
               
chr27:30261093-30260776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
89, 24
               

               
Conread position:
               
5-369
               

               
Cow position:
               
chr27:7731472-7731100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
68, 337
               

               
Conread position:
               
5-389
               

               
Cow position:
               
chr27:29185043-29184674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr27:19546719-19546300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 74
               

               
Conread position:
               
5-437
               

               
Cow position:
               
chr27:19660730-19661160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
5-442
               

               
Cow position:
               
chr27:2592339-2592763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 24
               

               
Conread position:
               
5-479
               

               
Cow position:
               
chr27:24331516-24331988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 20
               

               
Conread position:
               
5-484
               

               
Cow position:
               
chr27:6550257-6550715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 48
               

               
Conread position:
               
5-489
               

               
Cow position:
               
chr27:30407243-30406762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 23
               

               
Conread position:
               
5-501
               

               
Cow position:
               
chr27:18558160-18558660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 48
               

               
Conread position:
               
5-502
               

               
Cow position:
               
chr27:30868949-30868458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
5-504
               

               
Cow position:
               
chr27:26413476-26412974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 322
               

               
Conread position:
               
5-516
               

               
Cow position:
               
chr27:11435525-11435035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
5-516
               

               
Cow position:
               
chr27:15925144-15925631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 37
               

               
Conread position:
               
6-437
               

               
Cow position:
               
chr27:30374779-30374353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
6-516
               

               
Cow position:
               
chr27:21978340-21977841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 23
               

               
Conread position:
               
7-433
               

               
Cow position:
               
chr27:22454989-22454565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 194
               

               
Conread position:
               
8-242
               

               
Cow position:
               
chr27:22422058-22421824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
75, 56
               

               
Conread position:
               
8-476
               

               
Cow position:
               
chr27:15204431-15203975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 19
               

               
Conread position:
               
8-509
               

               
Cow position:
               
chr27:22602982-22603451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 35
               

               
Conread position:
               
8-516
               

               
Cow position:
               
chr27:29831903-29831392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
11-516
               

               
Cow position:
               
chr27:22439945-22440438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 7
               

               
Conread position:
               
15-487
               

               
Cow position:
               
chr27:26807766-26807299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
19-508
               

               
Cow position:
               
chr27:4386260-4385777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 187
               

               
Conread position:
               
20-345
               

               
Cow position:
               
chr27:22569584-22569898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
22-307
               

               
Cow position:
               
chr27:15865416-15865696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
185, 11
               

               
Conread position:
               
23-383
               

               
Cow position:
               
chr27:30872245-30871897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
23-516
               

               
Cow position:
               
chr27:21393700-21393211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
24-491
               

               
Cow position:
               
chr27:23483031-23483496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 113
               

               
Conread position:
               
25-515
               

               
Cow position:
               
chr27:27050096-27049625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
26-249
               

               
Cow position:
               
chr27:22348302-22348521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
26-278
               

               
Cow position:
               
chr27:6302655-6302398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
170, 37
               

               
Conread position:
               
26-291
               

               
Cow position:
               
chr27:15215037-15215307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
22, 148
               

               
Conread position:
               
26-363
               

               
Cow position:
               
chr27:16589890-16589570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
26-387
               

               
Cow position:
               
chr27:26426025-26426375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 65
               

               
Conread position:
               
26-388
               

               
Cow position:
               
chr27:15642987-15643343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 37
               

               
Conread position:
               
26-403
               

               
Cow position:
               
chr27:30988610-30988980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 38
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr27:20795605-20796011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
26-502
               

               
Cow position:
               
chr27:22723884-22723431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 166
               

               
Conread position:
               
26-504
               

               
Cow position:
               
chr27:8942878-8942408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 19
               

               
Conread position:
               
26-516
               

               
Cow position:
               
chr27:6073743-6074212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 38
               

               
Conread position:
               
26-516
               

               
Cow position:
               
chr27:27064627-27064148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
26-516
               

               
Cow position:
               
chr27:27136708-27136239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
386, 40
               

               
Conread position:
               
27-380
               

               
Cow position:
               
chr27:27270728-27270378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
61, 34
               

               
Conread position:
               
27-435
               

               
Cow position:
               
chr27:27641197-27640777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 37
               

               
Conread position:
               
28-259
               

               
Cow position:
               
chr27:17918502-17918273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 170
               

               
Conread position:
               
28-431
               

               
Cow position:
               
chr27:30359219-30359606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 32
               

               
Conread position:
               
30-280
               

               
Cow position:
               
chr27:31018011-31017771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
30-310
               

               
Cow position:
               
chr27:24509631-24509910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
6, 161
               

               
Conread position:
               
30-312
               

               
Cow position:
               
chr27:22560005-22559726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
30-516
               

               
Cow position:
               
chr27:1353395-1353891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 70
               

               
Conread position:
               
31-260
               

               
Cow position:
               
chr27:29593815-29593585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 109
               

               
Conread position:
               
31-441
               

               
Cow position:
               
chr27:24738986-24738579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 7
               

               
Conread position:
               
32-229
               

               
Cow position:
               
chr27:19508831-19509027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
181, 32
               

               
Conread position:
               
32-352
               

               
Cow position:
               
chr27:5744682-5745000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
126, 20
               

               
Conread position:
               
32-509
               

               
Cow position:
               
chr27:26920092-26919624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
33-437
               

               
Cow position:
               
chr27:19544102-19543692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
10, 32
               

               
Conread position:
               
33-500
               

               
Cow position:
               
chr27:11273393-11273846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 55
               

               
Conread position:
               
33-504
               

               
Cow position:
               
chr27:7971378-7971854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
33-509
               

               
Cow position:
               
chr27:25809696-25809234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
34-437
               

               
Cow position:
               
chr27:30764856-30765249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 47
               

               
Conread position:
               
34-515
               

               
Cow position:
               
chr27:6454031-6454508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 7
               

               
Conread position:
               
34-516
               

               
Cow position:
               
chr27:15866042-15866517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 52
               

               
Conread position:
               
35-516
               

               
Cow position:
               
chr27:17397630-17397159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 5
               

               
Conread position:
               
36-282
               

               
Cow position:
               
chr27:26407339-26407100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
37-516
               

               
Cow position:
               
chr27:27039017-27038544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 116
               

               
Conread position:
               
38-174
               

               
Cow position:
               
chr27:6106527-6106658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr27:7343606-7343442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
66, 42
               

               
Conread position:
               
38-207
               

               
Cow position:
               
chr27:15003156-15002987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
38-236
               

               
Cow position:
               
chr27:12459113-12459304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
56, 26
               

               
Conread position:
               
38-242
               

               
Cow position:
               
chr27:29597924-29597725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
112, 12
               

               
Conread position:
               
38-261
               

               
Cow position:
               
chr27:23485037-23485257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
115, 26
               

               
Conread position:
               
38-279
               

               
Cow position:
               
chr27:23560206-23559969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
172, 17
               

               
Conread position:
               
38-323
               

               
Cow position:
               
chr27:23594144-23594422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
38-336
               

               
Cow position:
               
chr27:20045714-20046005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
38-346
               

               
Cow position:
               
chr27:8168610-8168300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
38-353
               

               
Cow position:
               
chr27:16103636-16103936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
38-359
               

               
Cow position:
               
chr27:426793-427111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 25
               

               
Conread position:
               
38-384
               

               
Cow position:
               
chr27:27438685-27438341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
38-423
               

               
Cow position:
               
chr27:20354423-20354783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
38-425
               

               
Cow position:
               
chr27:19685889-19685509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 9
               

               
Conread position:
               
38-426
               

               
Cow position:
               
chr27:30914830-30915207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
38-433
               

               
Cow position:
               
chr27:26238847-26239237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 50
               

               
Conread position:
               
38-434
               

               
Cow position:
               
chr27:15668951-15668553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 193
               

               
Conread position:
               
38-439
               

               
Cow position:
               
chr27:18593095-18593488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
395, 106
               

               
Conread position:
               
38-447
               

               
Cow position:
               
chr27:23554504-23554096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 79
               

               
Conread position:
               
38-448
               

               
Cow position:
               
chr27:26865285-26864891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
38-456
               

               
Cow position:
               
chr27:29494076-29493681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
38-462
               

               
Cow position:
               
chr27:10979683-10980106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 184
               

               
Conread position:
               
38-467
               

               
Cow position:
               
chr27:28518116-28518532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 166
               

               
Conread position:
               
38-488
               

               
Cow position:
               
chr27:7412217-7412651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
366, 25
               

               
Conread position:
               
38-492
               

               
Cow position:
               
chr27:21669288-21668853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
373, 25
               

               
Conread position:
               
38-501
               

               
Cow position:
               
chr27:7935335-7934883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
91, 171
               

               
Conread position:
               
38-503
               

               
Cow position:
               
chr27:28931979-28931506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 427
               

               
Conread position:
               
38-509
               

               
Cow position:
               
chr27:27020277-27019814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 111
               

               
Conread position:
               
38-514
               

               
Cow position:
               
chr27:1768799-1768344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 25
               

               
Conread position:
               
38-515
               

               
Cow position:
               
chr27:15454035-15454508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 26
               

               
Conread position:
               
38-516
               

               
Cow position:
               
chr27:22171124-22171594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 23
               

               
Conread position:
               
38-516
               

               
Cow position:
               
chr27:23452286-23452770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 25
               

               
Conread position:
               
38-516
               

               
Cow position:
               
chr27:26959791-26959328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
38-516
               

               
Cow position:
               
chr27:31231256-31230799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
39-174
               

               
Cow position:
               
chr27:19576498-19576365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
39-369
               

               
Cow position:
               
chr27:26490081-26489753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
162, 10
               

               
Conread position:
               
39-392
               

               
Cow position:
               
chr27:13841191-13841548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
39-410
               

               
Cow position:
               
chr27:18739198-18739577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
39-445
               

               
Cow position:
               
chr27:28001987-28001591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
52, 25
               

               
Conread position:
               
39-454
               

               
Cow position:
               
chr27:26643515-26643907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 25
               

               
Conread position:
               
39-471
               

               
Cow position:
               
chr27:23929794-23930215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 33
               

               
Conread position:
               
39-508
               

               
Cow position:
               
chr27:8062525-8062074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
39-508
               

               
Cow position:
               
chr27:24446322-24445868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 18
               

               
Conread position:
               
39-515
               

               
Cow position:
               
chr27:1637110-1636652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
49, 25
               

               
Conread position:
               
39-516
               

               
Cow position:
               
chr27:15870983-15871458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 48
               

               
Conread position:
               
39-516
               

               
Cow position:
               
chr27:22035555-22035081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 172
               

               
Conread position:
               
40-228
               

               
Cow position:
               
chr27:31210375-31210559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
169, 23
               

               
Conread position:
               
40-318
               

               
Cow position:
               
chr27:20481533-20481276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
234, 23
               

               
Conread position:
               
40-416
               

               
Cow position:
               
chr27:25276970-25277332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 22
               

               
Conread position:
               
40-434
               

               
Cow position:
               
chr27:23918208-23917843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
107, 16
               

               
Conread position:
               
40-493
               

               
Cow position:
               
chr27:12516016-12516471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 60
               

               
Conread position:
               
40-509
               

               
Cow position:
               
chr27:21408741-21408261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
40-515
               

               
Cow position:
               
chr27:30582560-30583032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 56
               

               
Conread position:
               
40-516
               

               
Cow position:
               
chr27:15867216-15867683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 24
               

               
Conread position:
               
40-516
               

               
Cow position:
               
chr27:19387844-19388313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 25
               

               
Conread position:
               
40-516
               

               
Cow position:
               
chr27:20637235-20636780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
40-516
               

               
Cow position:
               
chr27:28206627-28207094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 17
               

               
Conread position:
               
41-368
               

               
Cow position:
               
chr27:3306602-3306921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
41-515
               

               
Cow position:
               
chr27:14670556-14670086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 24
               

               
Conread position:
               
42-508
               

               
Cow position:
               
chr27:23882541-23882077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 93
               

               
Conread position:
               
42-509
               

               
Cow position:
               
chr27:27684288-27683825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
42-516
               

               
Cow position:
               
chr27:23472089-23472544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
370, 9
               

               
Conread position:
               
43-328
               

               
Cow position:
               
chr27:24371072-24371346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
178, 14
               

               
Conread position:
               
43-437
               

               
Cow position:
               
chr27:27632771-27632392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
366, 51
               

               
Conread position:
               
43-470
               

               
Cow position:
               
chr27:1291021-1290618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
215, 21
               

               
Conread position:
               
43-485
               

               
Cow position:
               
chr27:2957239-2957669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
43-509
               

               
Cow position:
               
chr27:4819884-4819421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
43-509
               

               
Cow position:
               
chr27:20641507-20641054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 54
               

               
Conread position:
               
44-215
               

               
Cow position:
               
chr27:27055119-27055285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
44-456
               

               
Cow position:
               
chr27:30890124-30890522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
370, 20
               

               
Conread position:
               
44-492
               

               
Cow position:
               
chr27:13411539-13411088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 10
               

               
Conread position:
               
44-508
               

               
Cow position:
               
chr27:19589303-19589763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 28
               

               
Conread position:
               
44-516
               

               
Cow position:
               
chr27:15315345-15315785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
13, 56
               

               
Conread position:
               
45-206
               

               
Cow position:
               
chr27:6319749-6319910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
159, 19
               

               
Conread position:
               
45-412
               

               
Cow position:
               
chr27:16705082-16705438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
45-445
               

               
Cow position:
               
chr27:20037286-20036903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
10, 48
               

               
Conread position:
               
45-498
               

               
Cow position:
               
chr27:22418936-22418489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 18
               

               
Conread position:
               
45-516
               

               
Cow position:
               
chr27:4672843-4673311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
46-369
               

               
Cow position:
               
chr27:28271318-28270998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
125, 26
               

               
Conread position:
               
46-516
               

               
Cow position:
               
chr27:20828878-20828411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 17
               

               
Conread position:
               
46-516
               

               
Cow position:
               
chr27:27856165-27856637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 16
               

               
Conread position:
               
47-333
               

               
Cow position:
               
chr27:30389465-30389180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
48-286
               

               
Cow position:
               
chr27:25721114-25720872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
102, 15
               

               
Conread position:
               
48-337
               

               
Cow position:
               
chr27:20901395-20901680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
49-229
               

               
Cow position:
               
chr27:28478415-28478594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
155, 15
               

               
Conread position:
               
49-426
               

               
Cow position:
               
chr27:19648108-19647738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
154, 15
               

               
Conread position:
               
49-488
               

               
Cow position:
               
chr27:20068140-20067719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 14
               

               
Conread position:
               
49-497
               

               
Cow position:
               
chr27:6541467-6541893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
360, 15
               

               
Conread position:
               
49-516
               

               
Cow position:
               
chr27:299545-299087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
49-516
               

               
Cow position:
               
chr27:25411673-25411219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 14
               

               
Conread position:
               
49-516
               

               
Cow position:
               
chr27:26984182-26984635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 17
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr27:4944677-4944365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
104, 21
               

               
Conread position:
               
51-321
               

               
Cow position:
               
chr27:29504812-29504543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
155, 21
               

               
Conread position:
               
51-429
               

               
Cow position:
               
chr27:16478501-16478139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 84
               

               
Conread position:
               
51-509
               

               
Cow position:
               
chr27:12246488-12246935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 93
               

               
Conread position:
               
52-323
               

               
Cow position:
               
chr27:8263500-8263229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
29, 37
               

               
Conread position:
               
52-444
               

               
Cow position:
               
chr27:29039104-29038715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
53-326
               

               
Cow position:
               
chr27:29380694-29380967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
53-479
               

               
Cow position:
               
chr27:27844166-27843734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 234
               

               
Conread position:
               
53-515
               

               
Cow position:
               
chr27:20549875-20549388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 201
               

               
Conread position:
               
54-441
               

               
Cow position:
               
chr27:12596617-12596978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
54-516
               

               
Cow position:
               
chr27:536303-536749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 14
               

               
Conread position:
               
55-508
               

               
Cow position:
               
chr27:26581596-26581158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 8
               

               
Conread position:
               
56-439
               

               
Cow position:
               
chr27:24321030-24321407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
58-279
               

               
Cow position:
               
chr27:20812747-20812967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
58-386
               

               
Cow position:
               
chr27:23662750-23662439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
227, 50
               

               
Conread position:
               
58-404
               

               
Cow position:
               
chr27:29431312-29431639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 6
               

               
Conread position:
               
58-516
               

               
Cow position:
               
chr27:24477259-24477696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
59-347
               

               
Cow position:
               
chr27:31148605-31148892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
270, 18
               

               
Conread position:
               
59-402
               

               
Cow position:
               
chr27:13251859-13252191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 87
               

               
Conread position:
               
59-516
               

               
Cow position:
               
chr27:16514014-16513586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 74
               

               
Conread position:
               
60-392
               

               
Cow position:
               
chr27:15409192-15408872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 185
               

               
Conread position:
               
60-516
               

               
Cow position:
               
chr27:16786675-16787128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 25
               

               
Conread position:
               
62-319
               

               
Cow position:
               
chr27:20656774-20656532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 137
               

               
Conread position:
               
64-286
               

               
Cow position:
               
chr27:22225744-22225526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
148, 74
               

               
Conread position:
               
64-312
               

               
Cow position:
               
chr27:20092986-20092743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
132, 179
               

               
Conread position:
               
64-331
               

               
Cow position:
               
chr27:21213636-21213885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
64-378
               

               
Cow position:
               
chr27:14343601-14343310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
61, 86
               

               
Conread position:
               
64-462
               

               
Cow position:
               
chr27:16284324-16284715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 16
               

               
Conread position:
               
64-502
               

               
Cow position:
               
chr27:8353327-8353746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
65-402
               

               
Cow position:
               
chr27:22547546-22547223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
65-516
               

               
Cow position:
               
chr27:1122881-1123313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 80
               

               
Conread position:
               
65-516
               

               
Cow position:
               
chr27:8962411-8961973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 139
               

               
Conread position:
               
66-439
               

               
Cow position:
               
chr27:30354494-30354126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 0
               

               
Conread position:
               
73-321
               

               
Cow position:
               
chr27:22386732-22386974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
137, 91
               

               
Conread position:
               
73-411
               

               
Cow position:
               
chr27:26150875-26151210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 141
               

               
Conread position:
               
73-427
               

               
Cow position:
               
chr27:1498172-1498521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 66
               

               
Conread position:
               
73-436
               

               
Cow position:
               
chr27:20553589-20553933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 108
               

               
Conread position:
               
73-470
               

               
Cow position:
               
chr27:24014882-24014491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 161
               

               
Conread position:
               
73-516
               

               
Cow position:
               
chr27:23632457-23632892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 71
               

               
Conread position:
               
73-516
               

               
Cow position:
               
chr27:26786134-26785686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 130
               

               
Conread position:
               
76-392
               

               
Cow position:
               
chr27:28496510-28496203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
197, 47
               

               
Conread position:
               
77-516
               

               
Cow position:
               
chr27:23128320-23128750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 90
               

               
Conread position:
               
80-442
               

               
Cow position:
               
chr27:4813019-4812655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
83-391
               

               
Cow position:
               
chr27:27613752-27613468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
37, 7
               

               
Conread position:
               
83-400
               

               
Cow position:
               
chr27:3763-4067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 85
               

               
Conread position:
               
84-456
               

               
Cow position:
               
chr27:26936030-26935682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
86-351
               

               
Cow position:
               
chr27:4858769-4858518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
86-402
               

               
Cow position:
               
chr27:6787826-6788140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
206, 114
               

               
Conread position:
               
86-515
               

               
Cow position:
               
chr27:5989753-5990176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 24
               

               
Conread position:
               
87-326
               

               
Cow position:
               
chr27:16625771-16626006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
87-333
               

               
Cow position:
               
chr27:8405951-8405720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
87-394
               

               
Cow position:
               
chr27:6159852-6160155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
113, 13
               

               
Conread position:
               
87-432
               

               
Cow position:
               
chr27:30605570-30605895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
201, 88
               

               
Conread position:
               
87-477
               

               
Cow position:
               
chr27:26509282-26508904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 19
               

               
Conread position:
               
87-515
               

               
Cow position:
               
chr27:8430567-8430132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
49, 42
               

               
Conread position:
               
87-516
               

               
Cow position:
               
chr27:4806030-4805613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 63
               

               
Conread position:
               
87-516
               

               
Cow position:
               
chr27:20283507-20283919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
68, 125
               

               
Conread position:
               
88-498
               

               
Cow position:
               
chr27:30550862-30551283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 247
               

               
Conread position:
               
88-516
               

               
Cow position:
               
chr27:28906938-28907362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
6, 10
               

               
Conread position:
               
90-442
               

               
Cow position:
               
chr27:4835732-4835384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 151
               

               
Conread position:
               
91-279
               

               
Cow position:
               
chr27:21975928-21976111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
96-435
               

               
Cow position:
               
chr27:1058797-1058465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 47
               

               
Conread position:
               
97-325
               

               
Cow position:
               
chr27:20078749-20078975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
191, 37
               

               
Conread position:
               
97-413
               

               
Cow position:
               
chr27:11296151-11296450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
102, 140
               

               
Conread position:
               
97-414
               

               
Cow position:
               
chr27:14937548-14937235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
97, 16
               

               
Conread position:
               
97-433
               

               
Cow position:
               
chr27:24341786-24342117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
170, 13
               

               
Conread position:
               
97-438
               

               
Cow position:
               
chr27:25998583-25998923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
107, 121
               

               
Conread position:
               
97-441
               

               
Cow position:
               
chr27:8048853-8048518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
196, 20
               

               
Conread position:
               
97-445
               

               
Cow position:
               
chr27:27053177-27053522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
100, 11
               

               
Conread position:
               
97-456
               

               
Cow position:
               
chr27:6499942-6500301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 102
               

               
Conread position:
               
97-471
               

               
Cow position:
               
chr27:2930707-2930345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 79
               

               
Conread position:
               
97-509
               

               
Cow position:
               
chr27:15271801-15272195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 69
               

               
Conread position:
               
97-516
               

               
Cow position:
               
chr27:10992238-10992663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 52
               

               
Conread position:
               
97-516
               

               
Cow position:
               
chr27:20869801-20869391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 91
               

               
Conread position:
               
98-445
               

               
Cow position:
               
chr27:706835-707171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 28
               

               
Conread position:
               
99-504
               

               
Cow position:
               
chr27:30793051-30792646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 36
               

               
Conread position:
               
99-508
               

               
Cow position:
               
chr27:15319340-15319739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 21
               

               
Conread position:
               
99-516
               

               
Cow position:
               
chr27:29977134-29977551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 155
               

               
Conread position:
               
102-330
               

               
Cow position:
               
chr27:11151555-11151789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 66
               

               
Conread position:
               
102-514
               

               
Cow position:
               
chr27:25379874-25380291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 218
               

               
Conread position:
               
103-354
               

               
Cow position:
               
chr27:715388-715640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
109, 69
               

               
Conread position:
               
103-368
               

               
Cow position:
               
chr27:29312787-29312522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
101, 190
               

               
Conread position:
               
103-516
               

               
Cow position:
               
chr27:18543874-18544294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 121
               

               
Conread position:
               
104-492
               

               
Cow position:
               
chr27:12429295-12429684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 91
               

               
Conread position:
               
104-502
               

               
Cow position:
               
chr27:28018226-28018616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 119
               

               
Conread position:
               
104-504
               

               
Cow position:
               
chr27:30362142-30362527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 25
               

               
Conread position:
               
104-515
               

               
Cow position:
               
chr27:9090902-9090506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 19
               

               
Conread position:
               
105-516
               

               
Cow position:
               
chr27:19423088-19423500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 82
               

               
Conread position:
               
107-379
               

               
Cow position:
               
chr27:24725861-24725576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 116
               

               
Conread position:
               
107-383
               

               
Cow position:
               
chr27:12244235-12243973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 84
               

               
Conread position:
               
107-421
               

               
Cow position:
               
chr27:27554789-27554486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
180, 98
               

               
Conread position:
               
107-435
               

               
Cow position:
               
chr27:11416343-11416658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 47
               

               
Conread position:
               
107-436
               

               
Cow position:
               
chr27:25471030-25471360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
107-442
               

               
Cow position:
               
chr27:27233910-27234242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
46, 27
               

               
Conread position:
               
107-482
               

               
Cow position:
               
chr27:7851281-7851640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
65, 75
               

               
Conread position:
               
107-516
               

               
Cow position:
               
chr27:4829921-4829519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 166
               

               
Conread position:
               
108-358
               

               
Cow position:
               
chr27:20918783-20919030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
182, 65
               

               
Conread position:
               
108-375
               

               
Cow position:
               
chr27:8571749-8571482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
184, 113
               

               
Conread position:
               
108-375
               

               
Cow position:
               
chr27:22513785-22513520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
53, 67
               

               
Conread position:
               
108-440
               

               
Cow position:
               
chr27:26218594-26218915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
108-442
               

               
Cow position:
               
chr27:26318926-26319259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
108-456
               

               
Cow position:
               
chr27:11815855-11815523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
182, 80
               

               
Conread position:
               
108-467
               

               
Cow position:
               
chr27:11081093-11081443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 53
               

               
Conread position:
               
108-489
               

               
Cow position:
               
chr27:14906620-14907000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 65
               

               
Conread position:
               
108-501
               

               
Cow position:
               
chr27:2332779-2332387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 55
               

               
Conread position:
               
108-516
               

               
Cow position:
               
chr27:435126-435538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 77
               

               
Conread position:
               
108-516
               

               
Cow position:
               
chr27:3988498-3988905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 113
               

               
Conread position:
               
108-516
               

               
Cow position:
               
chr27:4881496-4881904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 65
               

               
Conread position:
               
108-516
               

               
Cow position:
               
chr27:4983713-4983305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 65
               

               
Conread position:
               
108-516
               

               
Cow position:
               
chr27:11536213-11535802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 167
               

               
Conread position:
               
108-516
               

               
Cow position:
               
chr27:15032612-15033017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 113
               

               
Conread position:
               
108-516
               

               
Cow position:
               
chr27:15926687-15927068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
108-516
               

               
Cow position:
               
chr27:18446693-18446285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 100
               

               
Conread position:
               
108-516
               

               
Cow position:
               
chr27:19522426-19522834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 113
               

               
Conread position:
               
108-516
               

               
Cow position:
               
chr27:20811694-20811291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
115, 79
               

               
Conread position:
               
108-516
               

               
Cow position:
               
chr27:26428240-26427832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 56
               

               
Conread position:
               
109-346
               

               
Cow position:
               
chr27:14975563-14975801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
109-428
               

               
Cow position:
               
chr27:14435435-14435753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
183, 112
               

               
Conread position:
               
109-454
               

               
Cow position:
               
chr27:13005740-13006068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
332, 40
               

               
Conread position:
               
109-487
               

               
Cow position:
               
chr27:6909402-6909773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
27, 34
               

               
Conread position:
               
109-488
               

               
Cow position:
               
chr27:11489385-11489010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
80, 54
               

               
Conread position:
               
109-499
               

               
Cow position:
               
chr27:5854034-5853638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
183, 114
               

               
Conread position:
               
109-516
               

               
Cow position:
               
chr27:22399490-22399889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
109-516
               

               
Cow position:
               
chr27:22426939-22426533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 85
               

               
Conread position:
               
109-516
               

               
Cow position:
               
chr27:24999847-24999440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 100
               

               
Conread position:
               
109-516
               

               
Cow position:
               
chr27:28082433-28082021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
109-516
               

               
Cow position:
               
chr27:30417563-30417970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 102
               

               
Conread position:
               
110-325
               

               
Cow position:
               
chr27:30804237-30804448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
110-335
               

               
Cow position:
               
chr27:27442275-27442052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
90, 131
               

               
Conread position:
               
110-380
               

               
Cow position:
               
chr27:19668913-19668629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
110-433
               

               
Cow position:
               
chr27:29830654-29830335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
79, 84
               

               
Conread position:
               
110-508
               

               
Cow position:
               
chr27:14298468-14298072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
182, 83
               

               
Conread position:
               
110-516
               

               
Cow position:
               
chr27:23124450-23124060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
182, 44
               

               
Conread position:
               
111-360
               

               
Cow position:
               
chr27:20789484-20789240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 137
               

               
Conread position:
               
111-393
               

               
Cow position:
               
chr27:6051992-6052272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
145, 30
               

               
Conread position:
               
111-508
               

               
Cow position:
               
chr27:12016233-12016628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
111-516
               

               
Cow position:
               
chr27:22254776-22255183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
72, 66
               

               
Conread position:
               
111-516
               

               
Cow position:
               
chr27:23576643-23576243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 91
               

               
Conread position:
               
112-417
               

               
Cow position:
               
chr27:18031179-18030862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 302
               

               
Conread position:
               
114-377
               

               
Cow position:
               
chr27:19896655-19896913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
115-277
               

               
Cow position:
               
chr27:24306728-24306888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
94, 19
               

               
Conread position:
               
115-504
               

               
Cow position:
               
chr27:21351122-21350731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 20
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr27:26380272-26379958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 30
               

               
Conread position:
               
118-508
               

               
Cow position:
               
chr27:8958744-8959134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
174, 97
               

               
Conread position:
               
122-489
               

               
Cow position:
               
chr27:31373076-31372711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
123-516
               

               
Cow position:
               
chr27:17472715-17473118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 208
               

               
Conread position:
               
125-436
               

               
Cow position:
               
chr27:2683236-2682927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
82, 74
               

               
Conread position:
               
130-508
               

               
Cow position:
               
chr27:12148153-12147775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 91
               

               
Conread position:
               
133-508
               

               
Cow position:
               
chr27:30683820-30684196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 89
               

               
Conread position:
               
136-379
               

               
Cow position:
               
chr27:7452157-7452399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
156, 85
               

               
Conread position:
               
136-379
               

               
Cow position:
               
chr27:15633498-15633740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
156, 81
               

               
Conread position:
               
136-508
               

               
Cow position:
               
chr27:3690391-3690761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 25
               

               
Conread position:
               
136-508
               

               
Cow position:
               
chr27:15178121-15178501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 85
               

               
Conread position:
               
138-365
               

               
Cow position:
               
chr27:29816698-29816477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
138-417
               

               
Cow position:
               
chr27:21569919-21569646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
141-371
               

               
Cow position:
               
chr27:17715392-17715621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
151, 80
               

               
Conread position:
               
141-434
               

               
Cow position:
               
chr27:12001986-12001693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
126, 80
               

               
Conread position:
               
141-500
               

               
Cow position:
               
chr27:13354510-13354150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
151, 80
               

               
Conread position:
               
141-508
               

               
Cow position:
               
chr27:527159-526792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 80
               

               
Conread position:
               
141-508
               

               
Cow position:
               
chr27:652034-651669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 74
               

               
Conread position:
               
141-508
               

               
Cow position:
               
chr27:2589644-2590009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 80
               

               
Conread position:
               
141-508
               

               
Cow position:
               
chr27:3339709-3340076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
152, 80
               

               
Conread position:
               
141-508
               

               
Cow position:
               
chr27:8188072-8187705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 80
               

               
Conread position:
               
141-508
               

               
Cow position:
               
chr27:8742855-8743220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
151, 59
               

               
Conread position:
               
141-508
               

               
Cow position:
               
chr27:13421914-13422281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
151, 80
               

               
Conread position:
               
141-508
               

               
Cow position:
               
chr27:15100889-15100522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 80
               

               
Conread position:
               
141-516
               

               
Cow position:
               
chr27:5861123-5861501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
151, 81
               

               
Conread position:
               
141-516
               

               
Cow position:
               
chr27:15312126-15312494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
23, 67
               

               
Conread position:
               
141-516
               

               
Cow position:
               
chr27:18620729-18621096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
151, 80
               

               
Conread position:
               
141-516
               

               
Cow position:
               
chr27:19299316-19299691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 31
               

               
Conread position:
               
141-516
               

               
Cow position:
               
chr27:20859361-20858993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
151, 80
               

               
Conread position:
               
141-516
               

               
Cow position:
               
chr27:29035132-29035507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 80
               

               
Conread position:
               
143-402
               

               
Cow position:
               
chr27:27550807-27550566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
143-437
               

               
Cow position:
               
chr27:6522971-6523263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 57
               

               
Conread position:
               
144-368
               

               
Cow position:
               
chr27:3970794-3970572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
148, 77
               

               
Conread position:
               
144-386
               

               
Cow position:
               
chr27:154291-154533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
58, 235
               

               
Conread position:
               
144-446
               

               
Cow position:
               
chr27:13811793-13811491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
148, 77
               

               
Conread position:
               
144-508
               

               
Cow position:
               
chr27:22796413-22796776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 77
               

               
Conread position:
               
144-508
               

               
Cow position:
               
chr27:24240872-24241236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 77
               

               
Conread position:
               
144-508
               

               
Cow position:
               
chr27:31566660-31566296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 77
               

               
Conread position:
               
147-381
               

               
Cow position:
               
chr27:9234158-9234391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
145, 74
               

               
Conread position:
               
147-417
               

               
Cow position:
               
chr27:29283477-29283213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
146, 68
               

               
Conread position:
               
149-379
               

               
Cow position:
               
chr27:4596649-4596420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
143, 68
               

               
Conread position:
               
149-419
               

               
Cow position:
               
chr27:12181571-12181840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
143, 72
               

               
Conread position:
               
149-435
               

               
Cow position:
               
chr27:27528422-27528146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
149-457
               

               
Cow position:
               
chr27:25893291-25893598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
143, 72
               

               
Conread position:
               
149-457
               

               
Cow position:
               
chr27:29140380-29140689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
143, 72
               

               
Conread position:
               
149-507
               

               
Cow position:
               
chr27:1521921-1521563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
118, 72
               

               
Conread position:
               
149-508
               

               
Cow position:
               
chr27:1030315-1030671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
143, 72
               

               
Conread position:
               
149-508
               

               
Cow position:
               
chr27:3650724-3650365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 72
               

               
Conread position:
               
149-508
               

               
Cow position:
               
chr27:4769557-4769198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
143, 72
               

               
Conread position:
               
149-508
               

               
Cow position:
               
chr27:11417963-11417604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 72
               

               
Conread position:
               
149-508
               

               
Cow position:
               
chr27:16045967-16045613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
143, 72
               

               
Conread position:
               
149-508
               

               
Cow position:
               
chr27:26584235-26584592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 72
               

               
Conread position:
               
149-508
               

               
Cow position:
               
chr27:26787430-26787076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
143, 68
               

               
Conread position:
               
149-508
               

               
Cow position:
               
chr27:29797476-29797119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
143, 23
               

               
Conread position:
               
149-508
               

               
Cow position:
               
chr27:30306035-30306394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
143, 73
               

               
Conread position:
               
149-516
               

               
Cow position:
               
chr27:26141703-26142090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 53
               

               
Conread position:
               
150-509
               

               
Cow position:
               
chr27:13875662-13876017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 252
               

               
Conread position:
               
151-516
               

               
Cow position:
               
chr27:27449499-27449141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
152-395
               

               
Cow position:
               
chr27:9169710-9169470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
135, 177
               

               
Conread position:
               
152-411
               

               
Cow position:
               
chr27:28061825-28061574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
152-441
               

               
Cow position:
               
chr27:8571104-8570821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 94
               

               
Conread position:
               
152-459
               

               
Cow position:
               
chr27:14902717-14902410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 47
               

               
Conread position:
               
152-469
               

               
Cow position:
               
chr27:11094588-11094905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
115, 69
               

               
Conread position:
               
152-504
               

               
Cow position:
               
chr27:27810134-27809782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
140, 69
               

               
Conread position:
               
152-507
               

               
Cow position:
               
chr27:732509-732850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 9
               

               
Conread position:
               
152-508
               

               
Cow position:
               
chr27:28982970-28982617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
140, 50
               

               
Conread position:
               
152-508
               

               
Cow position:
               
chr27:29373669-29374023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 69
               

               
Conread position:
               
152-516
               

               
Cow position:
               
chr27:27040538-27040893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 50
               

               
Conread position:
               
154-352
               

               
Cow position:
               
chr27:29679389-29679191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 116
               

               
Conread position:
               
155-441
               

               
Cow position:
               
chr27:1183945-1183655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
41, 117
               

               
Conread position:
               
155-503
               

               
Cow position:
               
chr27:13843147-13843487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
47, 126
               

               
Conread position:
               
155-515
               

               
Cow position:
               
chr27:30560858-30561211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 29
               

               
Conread position:
               
156-441
               

               
Cow position:
               
chr27:30527121-30527387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
157-359
               

               
Cow position:
               
chr27:3096857-3096656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
135, 59
               

               
Conread position:
               
157-370
               

               
Cow position:
               
chr27:7274576-7274788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
157-373
               

               
Cow position:
               
chr27:13169644-13169859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
135, 58
               

               
Conread position:
               
157-379
               

               
Cow position:
               
chr27:2324427-2324648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
157-379
               

               
Cow position:
               
chr27:7926527-7926302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
157-379
               

               
Cow position:
               
chr27:13372614-13372835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
135, 58
               

               
Conread position:
               
157-417
               

               
Cow position:
               
chr27:20477566-20477825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
114, 60
               

               
Conread position:
               
157-433
               

               
Cow position:
               
chr27:16871975-16871706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 158
               

               
Conread position:
               
157-448
               

               
Cow position:
               
chr27:27494881-27495172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
157-456
               

               
Cow position:
               
chr27:26441115-26440822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 27
               

               
Conread position:
               
157-466
               

               
Cow position:
               
chr27:13837253-13837562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
135, 66
               

               
Conread position:
               
157-476
               

               
Cow position:
               
chr27:160435-160746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
157-484
               

               
Cow position:
               
chr27:29198608-29198281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
157-492
               

               
Cow position:
               
chr27:19552491-19552156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
157-495
               

               
Cow position:
               
chr27:773090-773428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
157-496
               

               
Cow position:
               
chr27:8932201-8932540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
157-501
               

               
Cow position:
               
chr27:1523237-1522893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr27:33024-32675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 58
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr27:524255-523904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr27:11605658-11606003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr27:11651016-11651367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr27:12005447-12005798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr27:12007382-12007031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 64
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr27:12502348-12501997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr27:18811623-18811975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 51
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr27:19325437-19325788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 60
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr27:19486750-19487101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 60
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr27:23080320-23079969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr27:26341684-26341333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr27:27630802-27630453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
136, 53
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr27:29445874-29446224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr27:30015138-30014787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr27:30271088-30271439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr27:30361143-30361494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 65
               

               
Conread position:
               
157-516
               

               
Cow position:
               
chr27:24227852-24227497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 12
               

               
Conread position:
               
158-442
               

               
Cow position:
               
chr27:27259556-27259830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
132, 46
               

               
Conread position:
               
158-516
               

               
Cow position:
               
chr27:25790746-25791108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 42
               

               
Conread position:
               
159-345
               

               
Cow position:
               
chr27:4011622-4011807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
159-389
               

               
Cow position:
               
chr27:22268444-22268673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
159-516
               

               
Cow position:
               
chr27:2298349-2298708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 234
               

               
Conread position:
               
159-516
               

               
Cow position:
               
chr27:8292058-8291714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
159-516
               

               
Cow position:
               
chr27:16237852-16238192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
58, 100
               

               
Conread position:
               
159-516
               

               
Cow position:
               
chr27:27141545-27141888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
160-323
               

               
Cow position:
               
chr27:20570064-20570228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 37
               

               
Conread position:
               
160-423
               

               
Cow position:
               
chr27:29250824-29251083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
244, 42
               

               
Conread position:
               
160-439
               

               
Cow position:
               
chr27:20766016-20765744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
161-379
               

               
Cow position:
               
chr27:6867334-6867551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
131, 60
               

               
Conread position:
               
162-352
               

               
Cow position:
               
chr27:9697722-9697912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
42, 93
               

               
Conread position:
               
163-344
               

               
Cow position:
               
chr27:10395312-10395134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
119, 46
               

               
Conread position:
               
163-391
               

               
Cow position:
               
chr27:11563198-11562971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 49
               

               
Conread position:
               
163-435
               

               
Cow position:
               
chr27:20543893-20544165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
69, 39
               

               
Conread position:
               
163-516
               

               
Cow position:
               
chr27:23070412-23070067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
166-412
               

               
Cow position:
               
chr27:464902-465143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
167-419
               

               
Cow position:
               
chr27:30844127-30843879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
43, 90
               

               
Conread position:
               
171-504
               

               
Cow position:
               
chr27:28190259-28189933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 32
               

               
Conread position:
               
171-516
               

               
Cow position:
               
chr27:18909212-18909548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
85, 28
               

               
Conread position:
               
172-469
               

               
Cow position:
               
chr27:26398302-26398010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
172-482
               

               
Cow position:
               
chr27:31147713-31147410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 32
               

               
Conread position:
               
172-516
               

               
Cow position:
               
chr27:22330717-22330364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
30, 184
               

               
Conread position:
               
173-440
               

               
Cow position:
               
chr27:19057648-19057915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
119, 48
               

               
Conread position:
               
173-443
               

               
Cow position:
               
chr27:18967800-18967533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
22, 32
               

               
Conread position:
               
173-470
               

               
Cow position:
               
chr27:3638871-3638574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
119, 48
               

               
Conread position:
               
173-484
               

               
Cow position:
               
chr27:27700072-27699761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
119, 48
               

               
Conread position:
               
173-508
               

               
Cow position:
               
chr27:10590722-10590387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 48
               

               
Conread position:
               
173-508
               

               
Cow position:
               
chr27:20750083-20749753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
119, 48
               

               
Conread position:
               
173-516
               

               
Cow position:
               
chr27:15349858-15349506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
55, 100
               

               
Conread position:
               
174-410
               

               
Cow position:
               
chr27:30670698-30670927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
175-352
               

               
Cow position:
               
chr27:14701616-14701441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
117, 24
               

               
Conread position:
               
175-420
               

               
Cow position:
               
chr27:911123-910884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
108, 27
               

               
Conread position:
               
175-426
               

               
Cow position:
               
chr27:1884001-1884244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
175-516
               

               
Cow position:
               
chr27:13182100-13182427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 25
               

               
Conread position:
               
178-462
               

               
Cow position:
               
chr27:30856422-30856149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
235, 80
               

               
Conread position:
               
178-508
               

               
Cow position:
               
chr27:5881740-5881411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 43
               

               
Conread position:
               
178-516
               

               
Cow position:
               
chr27:15859127-15858795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
178-516
               

               
Cow position:
               
chr27:26224310-26223973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 26
               

               
Conread position:
               
178-516
               

               
Cow position:
               
chr27:29515890-29515565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
263, 26
               

               
Conread position:
               
181-514
               

               
Cow position:
               
chr27:27522044-27521710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 42
               

               
Conread position:
               
181-516
               

               
Cow position:
               
chr27:19931117-19931449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
111, 40
               

               
Conread position:
               
182-344
               

               
Cow position:
               
chr27:12439740-12439579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 25
               

               
Conread position:
               
182-363
               

               
Cow position:
               
chr27:18487278-18487098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
110, 25
               

               
Conread position:
               
182-382
               

               
Cow position:
               
chr27:24062126-24061931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
182-433
               

               
Cow position:
               
chr27:26046069-26046316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
110, 25
               

               
Conread position:
               
182-436
               

               
Cow position:
               
chr27:10081707-10081449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
182-475
               

               
Cow position:
               
chr27:27623050-27622758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
182-484
               

               
Cow position:
               
chr27:668300-667998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
182-492
               

               
Cow position:
               
chr27:26952498-26952809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
182-499
               

               
Cow position:
               
chr27:2628109-2627793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
110, 41
               

               
Conread position:
               
182-502
               

               
Cow position:
               
chr27:14632806-14633120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
182-504
               

               
Cow position:
               
chr27:12503166-12502846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
182-508
               

               
Cow position:
               
chr27:1655308-1654982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
182-508
               

               
Cow position:
               
chr27:2002053-2001727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
182-508
               

               
Cow position:
               
chr27:17402858-17403184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
182-516
               

               
Cow position:
               
chr27:7290139-7289813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
182-516
               

               
Cow position:
               
chr27:16182043-16182360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
182-516
               

               
Cow position:
               
chr27:20634424-20634747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
183-393
               

               
Cow position:
               
chr27:20118373-20118573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 16
               

               
Conread position:
               
183-426
               

               
Cow position:
               
chr27:18215020-18215262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
184-516
               

               
Cow position:
               
chr27:25923760-25924079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
111, 25
               

               
Conread position:
               
185-515
               

               
Cow position:
               
chr27:30676876-30677194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
34, 76
               

               
Conread position:
               
186-515
               

               
Cow position:
               
chr27:9253945-9254265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
187-507
               

               
Cow position:
               
chr27:27502374-27502048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
188-516
               

               
Cow position:
               
chr27:27867720-27867389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
189-437
               

               
Cow position:
               
chr27:19577647-19577891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
78, 28
               

               
Conread position:
               
190-437
               

               
Cow position:
               
chr27:31217191-31216946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
102, 31
               

               
Conread position:
               
191-409
               

               
Cow position:
               
chr27:31499035-31499256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
12, 158
               

               
Conread position:
               
192-456
               

               
Cow position:
               
chr27:10110818-10110553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
192-516
               

               
Cow position:
               
chr27:1903034-1903359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 95
               

               
Conread position:
               
192-516
               

               
Cow position:
               
chr27:11402885-11403204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 115
               

               
Conread position:
               
193-376
               

               
Cow position:
               
chr27:29905579-29905758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
193-379
               

               
Cow position:
               
chr27:11287326-11287512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 24
               

               
Conread position:
               
193-379
               

               
Cow position:
               
chr27:22264008-22264193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
99, 28
               

               
Conread position:
               
193-379
               

               
Cow position:
               
chr27:31395113-31395298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
99, 28
               

               
Conread position:
               
193-417
               

               
Cow position:
               
chr27:1900894-1900670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
99, 28
               

               
Conread position:
               
193-418
               

               
Cow position:
               
chr27:20497912-20498136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
99, 29
               

               
Conread position:
               
193-422
               

               
Cow position:
               
chr27:27003298-27003079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
215, 90
               

               
Conread position:
               
193-433
               

               
Cow position:
               
chr27:28164430-28164198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
193-435
               

               
Cow position:
               
chr27:19637620-19637849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
193-455
               

               
Cow position:
               
chr27:26885280-26885010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
193-475
               

               
Cow position:
               
chr27:26573436-26573156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 57
               

               
Conread position:
               
193-504
               

               
Cow position:
               
chr27:13410195-13409884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 31
               

               
Conread position:
               
193-508
               

               
Cow position:
               
chr27:26857217-26856923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
95, 16
               

               
Conread position:
               
193-508
               

               
Cow position:
               
chr27:30177600-30177280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 96
               

               
Conread position:
               
193-509
               

               
Cow position:
               
chr27:16305798-16305491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
99, 57
               

               
Conread position:
               
193-514
               

               
Cow position:
               
chr27:2390267-2390589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 14
               

               
Conread position:
               
193-515
               

               
Cow position:
               
chr27:12549078-12549404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
193-516
               

               
Cow position:
               
chr27:1675347-1675666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
215, 28
               

               
Conread position:
               
193-516
               

               
Cow position:
               
chr27:3240039-3239716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
119, 28
               

               
Conread position:
               
193-516
               

               
Cow position:
               
chr27:10580136-10579813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
99, 14
               

               
Conread position:
               
193-516
               

               
Cow position:
               
chr27:11412695-11413011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
13, 28
               

               
Conread position:
               
193-516
               

               
Cow position:
               
chr27:11482116-11481805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
99, 15
               

               
Conread position:
               
193-516
               

               
Cow position:
               
chr27:12097568-12097891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
99, 28
               

               
Conread position:
               
193-516
               

               
Cow position:
               
chr27:14129477-14129799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 193
               

               
Conread position:
               
193-516
               

               
Cow position:
               
chr27:17763401-17763717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
100, 28
               

               
Conread position:
               
193-516
               

               
Cow position:
               
chr27:21349769-21349452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
99, 14
               

               
Conread position:
               
193-516
               

               
Cow position:
               
chr27:23015831-23016152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 28
               

               
Conread position:
               
194-465
               

               
Cow position:
               
chr27:26492722-26492455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
215, 6
               

               
Conread position:
               
194-476
               

               
Cow position:
               
chr27:8925418-8925689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
98, 27
               

               
Conread position:
               
194-504
               

               
Cow position:
               
chr27:29399793-29400101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 15
               

               
Conread position:
               
194-507
               

               
Cow position:
               
chr27:27606345-27606057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
221, 5
               

               
Conread position:
               
194-515
               

               
Cow position:
               
chr27:26833171-26833468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
194-516
               

               
Cow position:
               
chr27:2899794-2900105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
7, 11
               

               
Conread position:
               
194-516
               

               
Cow position:
               
chr27:5837022-5836704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
214, 23
               

               
Conread position:
               
194-516
               

               
Cow position:
               
chr27:9335382-9335065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
98, 23
               

               
Conread position:
               
194-516
               

               
Cow position:
               
chr27:15644481-15644161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 23
               

               
Conread position:
               
195-442
               

               
Cow position:
               
chr27:6620123-6620368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 52
               

               
Conread position:
               
195-442
               

               
Cow position:
               
chr27:15200679-15200919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
195-515
               

               
Cow position:
               
chr27:490876-491182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
195-516
               

               
Cow position:
               
chr27:13197898-13198201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 74
               

               
Conread position:
               
195-516
               

               
Cow position:
               
chr27:22655400-22655081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 22
               

               
Conread position:
               
197-415
               

               
Cow position:
               
chr27:18434490-18434278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
97, 61
               

               
Conread position:
               
198-393
               

               
Cow position:
               
chr27:24357240-24357438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
198-424
               

               
Cow position:
               
chr27:6037105-6037326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
198-434
               

               
Cow position:
               
chr27:12241053-12240826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
19, 66
               

               
Conread position:
               
198-509
               

               
Cow position:
               
chr27:8589535-8589214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
198-514
               

               
Cow position:
               
chr27:26091414-26091109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
95, 71
               

               
Conread position:
               
198-516
               

               
Cow position:
               
chr27:28984959-28984645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
6, 24
               

               
Conread position:
               
199-411
               

               
Cow position:
               
chr27:20127046-20126836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
11, 123
               

               
Conread position:
               
199-418
               

               
Cow position:
               
chr27:27055556-27055775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
199-486
               

               
Cow position:
               
chr27:30744841-30744555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
199-509
               

               
Cow position:
               
chr27:12751703-12751400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
199-515
               

               
Cow position:
               
chr27:10384628-10384307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
200-411
               

               
Cow position:
               
chr27:20591964-20592174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
93, 140
               

               
Conread position:
               
200-433
               

               
Cow position:
               
chr27:8388715-8388948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
200-442
               

               
Cow position:
               
chr27:6058484-6058724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
200-516
               

               
Cow position:
               
chr27:1189831-1189517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
92, 9
               

               
Conread position:
               
201-508
               

               
Cow position:
               
chr27:9045645-9045949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
201-515
               

               
Cow position:
               
chr27:30784109-30783797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
7, 68
               

               
Conread position:
               
201-516
               

               
Cow position:
               
chr27:23455172-23454854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 215
               

               
Conread position:
               
202-442
               

               
Cow position:
               
chr27:22498542-22498775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
192, 127
               

               
Conread position:
               
202-489
               

               
Cow position:
               
chr27:11422845-11422559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 6
               

               
Conread position:
               
202-509
               

               
Cow position:
               
chr27:19962463-19962766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
159, 15
               

               
Conread position:
               
202-516
               

               
Cow position:
               
chr27:2556793-2557108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
203-437
               

               
Cow position:
               
chr27:25676212-25676452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
64, 49
               

               
Conread position:
               
203-496
               

               
Cow position:
               
chr27:21138808-21139101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 87
               

               
Conread position:
               
203-508
               

               
Cow position:
               
chr27:2430254-2429947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
203-514
               

               
Cow position:
               
chr27:16960181-16960489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
20, 101
               

               
Conread position:
               
204-434
               

               
Cow position:
               
chr27:22518624-22518842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
81, 14
               

               
Conread position:
               
204-515
               

               
Cow position:
               
chr27:4664468-4664767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
210, 59
               

               
Conread position:
               
204-515
               

               
Cow position:
               
chr27:11723919-11723609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 57
               

               
Conread position:
               
204-515
               

               
Cow position:
               
chr27:26161490-26161800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
210, 27
               

               
Conread position:
               
204-516
               

               
Cow position:
               
chr27:11255508-11255809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 5
               

               
Conread position:
               
204-516
               

               
Cow position:
               
chr27:28276266-28276565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
204-516
               

               
Cow position:
               
chr27:30198247-30198571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
206-516
               

               
Cow position:
               
chr27:7958852-7958539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 139
               

               
Conread position:
               
206-516
               

               
Cow position:
               
chr27:26595409-26595724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 125
               

               
Conread position:
               
207-496
               

               
Cow position:
               
chr27:16580611-16580894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
62, 118
               

               
Conread position:
               
207-508
               

               
Cow position:
               
chr27:12231921-12231620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
10, 135
               

               
Conread position:
               
208-432
               

               
Cow position:
               
chr27:9159184-9159406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 149
               

               
Conread position:
               
208-442
               

               
Cow position:
               
chr27:13639003-13638770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
208-503
               

               
Cow position:
               
chr27:7591698-7591405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
84, 177
               

               
Conread position:
               
208-509
               

               
Cow position:
               
chr27:27737935-27737644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
66, 88
               

               
Conread position:
               
208-515
               

               
Cow position:
               
chr27:16550465-16550751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 43
               

               
Conread position:
               
209-442
               

               
Cow position:
               
chr27:28038349-28038115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
195, 0
               

               
Conread position:
               
212-437
               

               
Cow position:
               
chr27:29019757-29019529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
202, 0
               

               
Conread position:
               
212-516
               

               
Cow position:
               
chr27:26795979-26796272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
80, 117
               

               
Conread position:
               
215-508
               

               
Cow position:
               
chr27:24559447-24559163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
52, 114
               

               
Conread position:
               
216-435
               

               
Cow position:
               
chr27:22771750-22771973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
219-515
               

               
Cow position:
               
chr27:16619990-16620283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 0
               

               
Conread position:
               
220-437
               

               
Cow position:
               
chr27:794792-794999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
220-437
               

               
Cow position:
               
chr27:11762731-11762522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
192, 51
               

               
Conread position:
               
221-516
               

               
Cow position:
               
chr27:22179788-22179491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
72, 17
               

               
Conread position:
               
222-508
               

               
Cow position:
               
chr27:67227-66940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
70, 6
               

               
Conread position:
               
222-508
               

               
Cow position:
               
chr27:724715-724427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
222-508
               

               
Cow position:
               
chr27:26463886-26463598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
222-516
               

               
Cow position:
               
chr27:164683-164976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
71, 23
               

               
Conread position:
               
222-516
               

               
Cow position:
               
chr27:26331072-26330772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
223-508
               

               
Cow position:
               
chr27:222056-221769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
224-514
               

               
Cow position:
               
chr27:30703069-30702793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
45, 93
               

               
Conread position:
               
226-447
               

               
Cow position:
               
chr27:16041771-16041548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
226-509
               

               
Cow position:
               
chr27:24548786-24548510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
226-516
               

               
Cow position:
               
chr27:8973609-8973320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 213
               

               
Conread position:
               
226-516
               

               
Cow position:
               
chr27:9988718-9989003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 121
               

               
Conread position:
               
226-516
               

               
Cow position:
               
chr27:12240307-12240020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
67, 55
               

               
Conread position:
               
231-369
               

               
Cow position:
               
chr27:13376015-13375883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
233-455
               

               
Cow position:
               
chr27:25783620-25783837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
34, 49
               

               
Conread position:
               
233-509
               

               
Cow position:
               
chr27:17476067-17476332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
59, 138
               

               
Conread position:
               
233-514
               

               
Cow position:
               
chr27:18955187-18954917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
233-516
               

               
Cow position:
               
chr27:4825099-4824820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
27, 108
               

               
Conread position:
               
235-471
               

               
Cow position:
               
chr27:26436863-26436623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
58, 92
               

               
Conread position:
               
241-367
               

               
Cow position:
               
chr27:20548454-20548330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
241-508
               

               
Cow position:
               
chr27:13442827-13442550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
242-441
               

               
Cow position:
               
chr27:26625150-26625350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
242-477
               

               
Cow position:
               
chr27:16263360-16263590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
52, 100
               

               
Conread position:
               
245-441
               

               
Cow position:
               
chr27:2012076-2011882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
246-375
               

               
Cow position:
               
chr27:30483167-30483298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
246-388
               

               
Cow position:
               
chr27:28009032-28008891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
47, 88
               

               
Conread position:
               
246-403
               

               
Cow position:
               
chr27:30989816-30989661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
41, 69
               

               
Conread position:
               
246-436
               

               
Cow position:
               
chr27:21453049-21452854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
246-514
               

               
Cow position:
               
chr27:31372263-31371999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
248-507
               

               
Cow position:
               
chr27:13258138-13257879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 160
               

               
Conread position:
               
248-515
               

               
Cow position:
               
chr27:10284297-10284014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
9, 121
               

               
Conread position:
               
248-516
               

               
Cow position:
               
chr27:16822842-16823106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
249-433
               

               
Cow position:
               
chr27:17926603-17926424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
250-512
               

               
Cow position:
               
chr27:25982676-25982424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
251-496
               

               
Cow position:
               
chr27:30844937-30845170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
131, 11
               

               
Conread position:
               
251-507
               

               
Cow position:
               
chr27:22394203-22394456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
252-442
               

               
Cow position:
               
chr27:21419034-21418844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 94
               

               
Conread position:
               
253-516
               

               
Cow position:
               
chr27:30921195-30921447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
37, 56
               

               
Conread position:
               
254-433
               

               
Cow position:
               
chr27:7495292-7495470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
155, 9
               

               
Conread position:
               
254-470
               

               
Cow position:
               
chr27:7426107-7425888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
13, 8
               

               
Conread position:
               
254-500
               

               
Cow position:
               
chr27:22549748-22549502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
38, 160
               

               
Conread position:
               
254-515
               

               
Cow position:
               
chr27:3231159-3231421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
38, 200
               

               
Conread position:
               
254-516
               

               
Cow position:
               
chr27:1294377-1294122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
254-516
               

               
Cow position:
               
chr27:5915642-5915379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
254-516
               

               
Cow position:
               
chr27:16030261-16030523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
38, 95
               

               
Conread position:
               
255-388
               

               
Cow position:
               
chr27:26322388-26322521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
255-503
               

               
Cow position:
               
chr27:25970549-25970791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
256-516
               

               
Cow position:
               
chr27:6674276-6674531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 7
               

               
Conread position:
               
257-508
               

               
Cow position:
               
chr27:12278229-12277990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
257-516
               

               
Cow position:
               
chr27:9337557-9337809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
35, 85
               

               
Conread position:
               
258-502
               

               
Cow position:
               
chr27:2643885-2643657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
36, 73
               

               
Conread position:
               
258-515
               

               
Cow position:
               
chr27:4719852-4719600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
258-515
               

               
Cow position:
               
chr27:18922491-18922745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
258-516
               

               
Cow position:
               
chr27:30389178-30388920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
153, 43
               

               
Conread position:
               
260-504
               

               
Cow position:
               
chr27:12650589-12650353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
260-512
               

               
Cow position:
               
chr27:29309065-29309314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
262-432
               

               
Cow position:
               
chr27:23012480-23012650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
262-472
               

               
Cow position:
               
chr27:12263633-12263839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
262-496
               

               
Cow position:
               
chr27:20372787-20372550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
25, 199
               

               
Conread position:
               
262-516
               

               
Cow position:
               
chr27:5882472-5882217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 198
               

               
Conread position:
               
262-516
               

               
Cow position:
               
chr27:14530804-14530548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
262-516
               

               
Cow position:
               
chr27:29812426-29812176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
30, 69
               

               
Conread position:
               
263-499
               

               
Cow position:
               
chr27:30508715-30508485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
29, 164
               

               
Conread position:
               
264-516
               

               
Cow position:
               
chr27:16331387-16331629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
265-422
               

               
Cow position:
               
chr27:23558341-23558183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
265-516
               

               
Cow position:
               
chr27:20066309-20066066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
181, 65
               

               
Conread position:
               
268-516
               

               
Cow position:
               
chr27:6899672-6899419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 68
               

               
Conread position:
               
269-516
               

               
Cow position:
               
chr27:26597923-26598171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
23, 175
               

               
Conread position:
               
270-432
               

               
Cow position:
               
chr27:17924258-17924097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
107, 15
               

               
Conread position:
               
271-508
               

               
Cow position:
               
chr27:1482014-1481776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
272-515
               

               
Cow position:
               
chr27:9371559-9371795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
136, 54
               

               
Conread position:
               
272-515
               

               
Cow position:
               
chr27:13860688-13860450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
137, 105
               

               
Conread position:
               
273-433
               

               
Cow position:
               
chr27:26406987-26406830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
273-516
               

               
Cow position:
               
chr27:2901190-2900945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
273-516
               

               
Cow position:
               
chr27:26314145-26313905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
275-437
               

               
Cow position:
               
chr27:21578544-21578385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
139, 59
               

               
Conread position:
               
275-462
               

               
Cow position:
               
chr27:22609085-22608894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
275-515
               

               
Cow position:
               
chr27:8195275-8195511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
276-436
               

               
Cow position:
               
chr27:30436314-30436476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
277-504
               

               
Cow position:
               
chr27:3256102-3256321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
140, 52
               

               
Conread position:
               
278-430
               

               
Cow position:
               
chr27:13847700-13847849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
131, 56
               

               
Conread position:
               
278-475
               

               
Cow position:
               
chr27:18438963-18439153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
280-508
               

               
Cow position:
               
chr27:26015472-26015701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
283-508
               

               
Cow position:
               
chr27:13895804-13895576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
283-516
               

               
Cow position:
               
chr27:13902232-13901998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
284-504
               

               
Cow position:
               
chr27:31365591-31365813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
285-412
               

               
Cow position:
               
chr27:783798-783921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
285-423
               

               
Cow position:
               
chr27:31267214-31267077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
123, 48
               

               
Conread position:
               
285-433
               

               
Cow position:
               
chr27:30476065-30476213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
286-514
               

               
Cow position:
               
chr27:15509366-15509138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
122, 78
               

               
Conread position:
               
286-515
               

               
Cow position:
               
chr27:7418818-7418583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
82, 90
               

               
Conread position:
               
286-515
               

               
Cow position:
               
chr27:9436901-9436667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
286-515
               

               
Cow position:
               
chr27:23926100-23925879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
288-402
               

               
Cow position:
               
chr27:68371-68259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
288-445
               

               
Cow position:
               
chr27:30185360-30185518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
74, 56
               

               
Conread position:
               
288-490
               

               
Cow position:
               
chr27:943589-943381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
75, 11
               

               
Conread position:
               
288-490
               

               
Cow position:
               
chr27:11693664-11693469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
168, 143
               

               
Conread position:
               
288-500
               

               
Cow position:
               
chr27:21970724-21970516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
288-515
               

               
Cow position:
               
chr27:10987013-10986794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
124, 49
               

               
Conread position:
               
288-515
               

               
Cow position:
               
chr27:16099954-16099722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
288-515
               

               
Cow position:
               
chr27:18205406-18205626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
124, 72
               

               
Conread position:
               
288-515
               

               
Cow position:
               
chr27:20866455-20866235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
288-516
               

               
Cow position:
               
chr27:264320-264542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
288-516
               

               
Cow position:
               
chr27:1173477-1173247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
288-516
               

               
Cow position:
               
chr27:26935302-26935077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
121, 19
               

               
Conread position:
               
288-516
               

               
Cow position:
               
chr27:30748788-30749010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
289-504
               

               
Cow position:
               
chr27:26653370-26653589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
289-514
               

               
Cow position:
               
chr27:9977900-9978120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
120, 37
               

               
Conread position:
               
289-515
               

               
Cow position:
               
chr27:11091133-11090897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 91
               

               
Conread position:
               
289-516
               

               
Cow position:
               
chr27:26545852-26545627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
289-516
               

               
Cow position:
               
chr27:28107062-28106841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
125, 41
               

               
Conread position:
               
290-480
               

               
Cow position:
               
chr27:4928447-4928257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
120, 167
               

               
Conread position:
               
291-476
               

               
Cow position:
               
chr27:22293636-22293456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
118, 39
               

               
Conread position:
               
291-498
               

               
Cow position:
               
chr27:8012038-8011831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
118, 74
               

               
Conread position:
               
291-502
               

               
Cow position:
               
chr27:23984537-23984742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
182, 35
               

               
Conread position:
               
291-515
               

               
Cow position:
               
chr27:11634047-11634270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
125, 32
               

               
Conread position:
               
295-463
               

               
Cow position:
               
chr27:18558861-18559027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
296-513
               

               
Cow position:
               
chr27:24167897-24167678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
296-516
               

               
Cow position:
               
chr27:23511201-23511415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
113, 5
               

               
Conread position:
               
297-441
               

               
Cow position:
               
chr27:18860901-18861048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr27:427203-427415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
299-466
               

               
Cow position:
               
chr27:29693786-29693946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
114, 47
               

               
Conread position:
               
300-515
               

               
Cow position:
               
chr27:23793582-23793792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
95, 30
               

               
Conread position:
               
300-516
               

               
Cow position:
               
chr27:13977313-13977094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
301-504
               

               
Cow position:
               
chr27:20092533-20092338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
111, 42
               

               
Conread position:
               
302-512
               

               
Cow position:
               
chr27:1785222-1785431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
302-514
               

               
Cow position:
               
chr27:19627201-19626991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
112, 158
               

               
Conread position:
               
303-412
               

               
Cow position:
               
chr27:23736172-23736281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
304-483
               

               
Cow position:
               
chr27:27455372-27455194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
304-515
               

               
Cow position:
               
chr27:15632483-15632692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
110, 152
               

               
Conread position:
               
305-475
               

               
Cow position:
               
chr27:24689690-24689861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
306-513
               

               
Cow position:
               
chr27:25010217-25010419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
103, 56
               

               
Conread position:
               
308-516
               

               
Cow position:
               
chr27:4330676-4330877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 143
               

               
Conread position:
               
309-516
               

               
Cow position:
               
chr27:17646108-17645902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
312-508
               

               
Cow position:
               
chr27:834453-834256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
312-516
               

               
Cow position:
               
chr27:13273915-13273714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
94, 122
               

               
Conread position:
               
312-516
               

               
Cow position:
               
chr27:18218635-18218840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
314-516
               

               
Cow position:
               
chr27:24295184-24295386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
100, 124
               

               
Conread position:
               
315-516
               

               
Cow position:
               
chr27:23595371-23595566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
315-516
               

               
Cow position:
               
chr27:28146554-28146353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
94, 138
               

               
Conread position:
               
318-440
               

               
Cow position:
               
chr27:29503036-29502914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 113
               

               
Conread position:
               
320-508
               

               
Cow position:
               
chr27:197395-197584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
321-516
               

               
Cow position:
               
chr27:27578673-27578869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
322-515
               

               
Cow position:
               
chr27:24116174-24115981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
85, 164
               

               
Conread position:
               
323-497
               

               
Cow position:
               
chr27:18155128-18155303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
323-516
               

               
Cow position:
               
chr27:21564760-21564952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 31
               

               
Conread position:
               
324-516
               

               
Cow position:
               
chr27:16983892-16984083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
90, 39
               

               
Conread position:
               
330-508
               

               
Cow position:
               
chr27:23894396-23894217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
331-515
               

               
Cow position:
               
chr27:22108151-22107966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
332-436
               

               
Cow position:
               
chr27:1564938-1565042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
332-508
               

               
Cow position:
               
chr27:17463039-17462863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 24
               

               
Conread position:
               
336-516
               

               
Cow position:
               
chr27:29341437-29341248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
337-509
               

               
Cow position:
               
chr27:12191333-12191160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
337-509
               

               
Cow position:
               
chr27:23731416-23731241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
339-516
               

               
Cow position:
               
chr27:15343007-15342836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
70, 11
               

               
Conread position:
               
340-516
               

               
Cow position:
               
chr27:21283197-21283370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
68, 119
               

               
Conread position:
               
340-516
               

               
Cow position:
               
chr27:23502583-23502757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
74, 116
               

               
Conread position:
               
346-504
               

               
Cow position:
               
chr27:20635977-20636133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
355-516
               

               
Cow position:
               
chr27:27897113-27896951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
356-516
               

               
Cow position:
               
chr27:1906204-1906365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
362-516
               

               
Cow position:
               
chr27:17926176-17926025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
365-515
               

               
Cow position:
               
chr27:9262251-9262397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
376-514
               

               
Cow position:
               
chr27:29815762-29815899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
39, 131
               

               
Conread position:
               
386-516
               

               
Cow position:
               
chr27:15408253-15408125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 88
               

               
Conread position:
               
390-516
               

               
Cow position:
               
chr27:31397336-31397464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
407-516
               

               
Cow position:
               
chr27:1769097-1768988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
407-516
               

               
Cow position:
               
chr27:21297087-21297196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.