Cow genome map

Conread name: Ss1.1-Lym2-sn55_A01.f.5

Conread position: 1-168
Cow position: chrX:29687988-29688144 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 1-169
Cow position: chrX:40046382-40046545 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 1-172
Cow position: chrX:46079279-46079112 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 1-226
Cow position: chrX:28940431-28940219 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 109, 28

Conread position: 1-236
Cow position: chrX:40531839-40532080 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 28, 205

Conread position: 1-237
Cow position: chrX:6599587-6599821 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 205, 28

Conread position: 1-254
Cow position: chrX:35986007-35985764 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 203, 28

Conread position: 1-261
Cow position: chrX:20957426-20957187 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 1-279
Cow position: chrX:22115128-22115396 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 28

Conread position: 1-294
Cow position: chrX:47345517-47345240 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 39, 0

Conread position: 1-296
Cow position: chrX:12095584-12095870 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 93, 26

Conread position: 1-298
Cow position: chrX:40283310-40283027 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 196
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 291, 25

Conread position: 1-309
Cow position: chrX:29230194-29229901 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 66, 37

Conread position: 1-311
Cow position: chrX:46291328-46291028 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 209
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 199, 89

Conread position: 1-316
Cow position: chrX:24331964-24331662 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 68, 36

Conread position: 1-319
Cow position: chrX:4403505-4403195 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 92, 20

Conread position: 1-320
Cow position: chrX:26881375-26881688 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 6

Conread position: 1-325
Cow position: chrX:30337767-30338064 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 1-339
Cow position: chrX:616052-616401 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 1-344
Cow position: chrX:29723938-29723597 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 228
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 75

Conread position: 1-344
Cow position: chrX:47279749-47280076 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 228
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 149, 42

Conread position: 1-352
Cow position: chrX:27302064-27301717 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 239
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 151, 29

Conread position: 1-358
Cow position: chrX:27228316-27227969 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 286, 37

Conread position: 1-367
Cow position: chrX:27206984-27206636 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 271
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 122, 14

Conread position: 1-368
Cow position: chrX:25207674-25208011 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 251
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 292, 49

Conread position: 1-374
Cow position: chrX:14955581-14955938 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 242
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 291, 25

Conread position: 1-386
Cow position: chrX:32821227-32820847 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 38

Conread position: 1-412
Cow position: chrX:28013251-28013648 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 262
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 157, 28

Conread position: 1-412
Cow position: chrX:38853398-38852988 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 136

Conread position: 1-423
Cow position: chrX:36283527-36283125 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 28

Conread position: 1-437
Cow position: chrX:45449097-45448653 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 291
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 78, 25

Conread position: 1-441
Cow position: chrX:9361071-9360645 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 293
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 251, 25

Conread position: 1-441
Cow position: chrX:9635002-9635419 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 410, 28

Conread position: 1-441
Cow position: chrX:21672749-21672313 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 24

Conread position: 1-456
Cow position: chrX:24365635-24366082 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 28

Conread position: 1-465
Cow position: chrX:27431734-27432180 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 63

Conread position: 1-513
Cow position: chrX:40269695-40269166 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 11

Conread position: 1-515
Cow position: chrX:4996775-4996303 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 37

Conread position: 1-515
Cow position: chrX:7351491-7350990 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 54

Conread position: 1-515
Cow position: chrX:47210649-47211162 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 25

Conread position: 1-516
Cow position: chrX:5118311-5118796 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 28

Conread position: 1-516
Cow position: chrX:7695950-7695451 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 76

Conread position: 1-516
Cow position: chrX:10865683-10866180 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 37

Conread position: 1-516
Cow position: chrX:13647597-13648097 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 28

Conread position: 1-516
Cow position: chrX:26493194-26492689 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 25

Conread position: 1-516
Cow position: chrX:34753987-34754505 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 25

Conread position: 1-516
Cow position: chrX:40035252-40035784 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 28

Conread position: 1-516
Cow position: chrX:43115336-43114859 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 28

Conread position: 2-158
Cow position: chrX:31983392-31983544 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 2-209
Cow position: chrX:38587656-38587853 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 2-382
Cow position: chrX:4278932-4279293 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 252
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 74, 25

Conread position: 2-418
Cow position: chrX:34412034-34411624 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 42

Conread position: 2-433
Cow position: chrX:42380924-42381330 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 38

Conread position: 2-499
Cow position: chrX:16721604-16722098 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 322
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 41, 146

Conread position: 2-502
Cow position: chrX:35273558-35273045 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 81

Conread position: 2-515
Cow position: chrX:28632296-28632790 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 19

Conread position: 2-516
Cow position: chrX:27442352-27442865 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 27

Conread position: 2-516
Cow position: chrX:28865818-28866302 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 34

Conread position: 2-516
Cow position: chrX:34532704-34532218 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 407, 36

Conread position: 5-175
Cow position: chrX:37062384-37062561 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 5-185
Cow position: chrX:753354-753166 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 5-221
Cow position: chrX:25412105-25411886 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 146
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 22, 204

Conread position: 5-266
Cow position: chrX:15820790-15820531 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 172
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 123

Conread position: 5-280
Cow position: chrX:39220269-39220000 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 208, 58

Conread position: 5-286
Cow position: chrX:40680798-40680525 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 189
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 38

Conread position: 5-302
Cow position: chrX:16348371-16348672 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 218
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 51, 135

Conread position: 5-337
Cow position: chrX:41027343-41027020 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 227
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 192, 29

Conread position: 5-360
Cow position: chrX:31252591-31252258 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 5-376
Cow position: chrX:6407727-6407376 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 256
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 62, 24

Conread position: 5-413
Cow position: chrX:27175182-27174785 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 24

Conread position: 5-435
Cow position: chrX:30962692-30963104 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 24

Conread position: 5-437
Cow position: chrX:16416686-16416274 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 31

Conread position: 5-437
Cow position: chrX:34543968-34543553 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 24

Conread position: 5-439
Cow position: chrX:27393832-27394250 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 190

Conread position: 5-445
Cow position: chrX:22822238-22821805 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 33

Conread position: 5-456
Cow position: chrX:25815716-25816149 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 24

Conread position: 5-484
Cow position: chrX:16762951-16762491 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 43

Conread position: 5-489
Cow position: chrX:46032543-46033004 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 27

Conread position: 5-491
Cow position: chrX:31294386-31294828 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 5-508
Cow position: chrX:40480665-40481177 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 143

Conread position: 5-509
Cow position: chrX:42246998-42247482 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 24

Conread position: 5-513
Cow position: chrX:10831298-10831822 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 44

Conread position: 5-514
Cow position: chrX:28846709-28847187 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 44

Conread position: 5-515
Cow position: chrX:5017228-5017718 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 28

Conread position: 5-515
Cow position: chrX:12309202-12309700 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 24

Conread position: 5-515
Cow position: chrX:34565468-34564988 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 23

Conread position: 5-516
Cow position: chrX:152088-151588 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 32

Conread position: 5-516
Cow position: chrX:4632671-4633164 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 24

Conread position: 5-516
Cow position: chrX:8900202-8899711 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 72

Conread position: 5-516
Cow position: chrX:15546065-15545584 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 24

Conread position: 5-516
Cow position: chrX:20339710-20340204 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 24

Conread position: 5-516
Cow position: chrX:21593475-21592973 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 85

Conread position: 5-516
Cow position: chrX:22813248-22812749 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 21

Conread position: 5-516
Cow position: chrX:31373738-31373265 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 175

Conread position: 5-516
Cow position: chrX:34503111-34502610 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 5-516
Cow position: chrX:40557475-40557989 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 347

Conread position: 5-516
Cow position: chrX:47344482-47343979 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 22

Conread position: 6-515
Cow position: chrX:17964328-17964827 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 173

Conread position: 6-516
Cow position: chrX:5872514-5872000 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 96

Conread position: 7-377
Cow position: chrX:22387059-22387421 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 38

Conread position: 7-379
Cow position: chrX:169360-169701 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 286, 42

Conread position: 7-435
Cow position: chrX:6278303-6278738 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 87

Conread position: 7-437
Cow position: chrX:23513826-23514252 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 52

Conread position: 7-437
Cow position: chrX:44961935-44961513 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 22

Conread position: 7-456
Cow position: chrX:28877985-28878415 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 34

Conread position: 7-508
Cow position: chrX:46532309-46532825 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 37

Conread position: 7-509
Cow position: chrX:13868885-13868391 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 36

Conread position: 7-515
Cow position: chrX:45968327-45967850 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 339
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 407, 22

Conread position: 7-516
Cow position: chrX:4043675-4044171 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 426, 116

Conread position: 7-516
Cow position: chrX:12249996-12249488 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 16

Conread position: 7-516
Cow position: chrX:18694737-18695234 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 86

Conread position: 7-516
Cow position: chrX:37489910-37489405 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 64

Conread position: 8-312
Cow position: chrX:38654252-38654542 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 200, 47

Conread position: 8-516
Cow position: chrX:44192263-44192754 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 13

Conread position: 10-255
Cow position: chrX:6541547-6541791 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 33, 56

Conread position: 13-385
Cow position: chrX:7337018-7336645 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 243
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 191, 40

Conread position: 15-435
Cow position: chrX:13382507-13382092 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 48

Conread position: 19-414
Cow position: chrX:3580122-3579735 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 54

Conread position: 19-441
Cow position: chrX:9416504-9416931 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 153

Conread position: 19-516
Cow position: chrX:8797427-8796938 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 62

Conread position: 20-516
Cow position: chrX:12290894-12290424 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 29

Conread position: 22-440
Cow position: chrX:6690085-6690485 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 41

Conread position: 22-516
Cow position: chrX:25035202-25035699 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 179

Conread position: 22-516
Cow position: chrX:27516699-27516220 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 79

Conread position: 22-516
Cow position: chrX:38964284-38963798 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 23-299
Cow position: chrX:10516427-10516157 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 167, 72

Conread position: 23-434
Cow position: chrX:12979662-12980060 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 26

Conread position: 24-312
Cow position: chrX:33539346-33539053 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 31

Conread position: 24-516
Cow position: chrX:30543113-30543595 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 18

Conread position: 24-516
Cow position: chrX:44397181-44396707 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 29

Conread position: 25-420
Cow position: chrX:39126500-39126121 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 260
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 40

Conread position: 25-427
Cow position: chrX:17042859-17042466 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 269
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 11, 66

Conread position: 25-515
Cow position: chrX:11717611-11718092 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 47

Conread position: 26-207
Cow position: chrX:36848406-36848585 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 150, 45

Conread position: 26-292
Cow position: chrX:37129444-37129177 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 173
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 62, 237

Conread position: 26-311
Cow position: chrX:29194403-29194123 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 192
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 57, 102

Conread position: 26-341
Cow position: chrX:9365503-9365815 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 38

Conread position: 26-353
Cow position: chrX:29680089-29680409 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 37

Conread position: 26-388
Cow position: chrX:36068190-36067835 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 260

Conread position: 26-394
Cow position: chrX:23785821-23785463 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 262
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 30, 64

Conread position: 26-394
Cow position: chrX:31312200-31311835 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 38

Conread position: 26-395
Cow position: chrX:43730053-43730406 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 26-470
Cow position: chrX:17726147-17725711 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 27-392
Cow position: chrX:42235355-42235722 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 35

Conread position: 28-339
Cow position: chrX:18204294-18204602 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 213
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 113, 35

Conread position: 28-509
Cow position: chrX:34402178-34401692 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 15

Conread position: 28-516
Cow position: chrX:28134511-28134036 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 87

Conread position: 28-516
Cow position: chrX:33640146-33639655 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 239

Conread position: 29-282
Cow position: chrX:5135354-5135607 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 84, 13

Conread position: 29-290
Cow position: chrX:42855626-42855365 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 168, 35

Conread position: 29-344
Cow position: chrX:11084895-11085201 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 264, 38

Conread position: 29-516
Cow position: chrX:38226940-38227403 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 68

Conread position: 30-242
Cow position: chrX:29553453-29553243 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 142
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 30-320
Cow position: chrX:27119859-27119579 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 262, 33

Conread position: 30-337
Cow position: chrX:5679402-5679700 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 37

Conread position: 30-502
Cow position: chrX:41526362-41526818 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 30-516
Cow position: chrX:42171129-42171609 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 28

Conread position: 31-301
Cow position: chrX:21328083-21327802 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 129

Conread position: 31-344
Cow position: chrX:42873551-42873249 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 213
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 38, 50

Conread position: 31-504
Cow position: chrX:5919661-5919169 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 26

Conread position: 32-242
Cow position: chrX:27306620-27306410 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 172, 5

Conread position: 32-437
Cow position: chrX:6563688-6563278 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 278
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 13, 36

Conread position: 32-503
Cow position: chrX:14599695-14599233 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 17

Conread position: 32-513
Cow position: chrX:3154076-3154560 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 33-335
Cow position: chrX:7710375-7710678 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 208
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 255, 6

Conread position: 33-417
Cow position: chrX:29601666-29602047 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 20

Conread position: 33-515
Cow position: chrX:16703844-16703358 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 309
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 37, 73

Conread position: 33-515
Cow position: chrX:16712128-16711642 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 73

Conread position: 33-516
Cow position: chrX:7278073-7277615 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 40

Conread position: 33-516
Cow position: chrX:7646422-7645945 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 31

Conread position: 34-294
Cow position: chrX:20168720-20168464 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 169
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 34-310
Cow position: chrX:45670387-45670117 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 184
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 97, 172

Conread position: 34-380
Cow position: chrX:47186164-47186497 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 22, 34

Conread position: 34-394
Cow position: chrX:3488728-3489075 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 228
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 171, 34

Conread position: 34-437
Cow position: chrX:38549610-38549214 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 30

Conread position: 34-462
Cow position: chrX:27508862-27509279 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 31

Conread position: 34-516
Cow position: chrX:27446849-27446378 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 49

Conread position: 34-516
Cow position: chrX:41790265-41790753 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 31

Conread position: 35-352
Cow position: chrX:39415205-39415518 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 215
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 8, 167

Conread position: 35-396
Cow position: chrX:10393948-10394288 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 232
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 258, 30

Conread position: 35-509
Cow position: chrX:15147034-15147490 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 28

Conread position: 35-515
Cow position: chrX:25713959-25713497 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 322
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 6, 31

Conread position: 35-516
Cow position: chrX:38006606-38007081 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 38

Conread position: 36-423
Cow position: chrX:1503490-1503119 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 28

Conread position: 36-437
Cow position: chrX:618845-619242 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 59

Conread position: 36-439
Cow position: chrX:37119758-37119363 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 277
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 40

Conread position: 37-418
Cow position: chrX:9425594-9425956 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 265
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 57, 12

Conread position: 37-516
Cow position: chrX:1615886-1616364 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 49

Conread position: 38-173
Cow position: chrX:23358955-23359085 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 38-187
Cow position: chrX:27668799-27668946 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 38-196
Cow position: chrX:39290516-39290362 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 38-237
Cow position: chrX:16984797-16984590 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 160, 15

Conread position: 38-237
Cow position: chrX:19394717-19394515 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 38-237
Cow position: chrX:24749251-24749050 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 101

Conread position: 38-249
Cow position: chrX:22392826-22393035 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 169, 25

Conread position: 38-292
Cow position: chrX:1466322-1466069 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 38-312
Cow position: chrX:42927665-42927931 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 38-326
Cow position: chrX:34504891-34505173 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 84, 25

Conread position: 38-328
Cow position: chrX:34315684-34315396 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 207

Conread position: 38-332
Cow position: chrX:40685169-40685463 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 26

Conread position: 38-344
Cow position: chrX:34314183-34313889 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 38-375
Cow position: chrX:4399280-4398954 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 50

Conread position: 38-377
Cow position: chrX:35885570-35885903 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 229
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 40, 15

Conread position: 38-379
Cow position: chrX:27145761-27145447 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 11

Conread position: 38-394
Cow position: chrX:11633842-11633488 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 25

Conread position: 38-396
Cow position: chrX:8869242-8869601 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 26

Conread position: 38-399
Cow position: chrX:47484102-47484467 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 49

Conread position: 38-401
Cow position: chrX:10252040-10252379 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 18

Conread position: 38-407
Cow position: chrX:29544720-29545083 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 16

Conread position: 38-410
Cow position: chrX:46587983-46587611 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 28

Conread position: 38-412
Cow position: chrX:32330333-32329952 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 260
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 18, 111

Conread position: 38-412
Cow position: chrX:47046351-47046728 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 260
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 62

Conread position: 38-412
Cow position: chrX:48236978-48236603 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 75

Conread position: 38-433
Cow position: chrX:35543046-35542661 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 376, 26

Conread position: 38-436
Cow position: chrX:17231899-17231501 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 37

Conread position: 38-437
Cow position: chrX:38642409-38642026 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 38-438
Cow position: chrX:22074959-22074565 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 26

Conread position: 38-483
Cow position: chrX:8731256-8730799 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 55

Conread position: 38-499
Cow position: chrX:33466786-33466321 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 61

Conread position: 38-504
Cow position: chrX:45414148-45414601 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 30

Conread position: 38-509
Cow position: chrX:34377101-34376647 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 448, 25

Conread position: 38-513
Cow position: chrX:14883797-14884274 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 9

Conread position: 38-514
Cow position: chrX:34441291-34441758 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 60

Conread position: 38-516
Cow position: chrX:6414200-6413733 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 26

Conread position: 38-516
Cow position: chrX:9252003-9252487 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 25

Conread position: 38-516
Cow position: chrX:11656240-11655766 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 365, 26

Conread position: 38-516
Cow position: chrX:17795142-17794682 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 207

Conread position: 38-516
Cow position: chrX:20887483-20887957 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 11

Conread position: 38-516
Cow position: chrX:24287771-24288226 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 61

Conread position: 38-516
Cow position: chrX:27705749-27705280 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 146

Conread position: 38-516
Cow position: chrX:31250551-31250079 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 62

Conread position: 38-516
Cow position: chrX:31436631-31436167 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 13

Conread position: 38-516
Cow position: chrX:31729599-31729145 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 15

Conread position: 38-516
Cow position: chrX:33855061-33855553 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 25

Conread position: 38-516
Cow position: chrX:38218875-38218405 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 26

Conread position: 39-204
Cow position: chrX:2936114-2935952 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 39-291
Cow position: chrX:918557-918818 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 103, 15

Conread position: 39-311
Cow position: chrX:17949331-17949601 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 30

Conread position: 39-374
Cow position: chrX:22921482-22921143 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 229
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 27, 60

Conread position: 39-376
Cow position: chrX:46433652-46433310 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 234
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 18, 60

Conread position: 39-379
Cow position: chrX:18485964-18485619 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 234
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 39, 50

Conread position: 39-389
Cow position: chrX:35382877-35383205 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 233
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 234, 81

Conread position: 39-437
Cow position: chrX:36198137-36197733 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 265
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 29, 50

Conread position: 39-437
Cow position: chrX:38935440-38935047 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 55

Conread position: 39-442
Cow position: chrX:17888265-17888645 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 25

Conread position: 39-461
Cow position: chrX:32019972-32020380 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 49

Conread position: 39-480
Cow position: chrX:30922329-30921908 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 299
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 249, 29

Conread position: 39-504
Cow position: chrX:1055220-1055694 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 59

Conread position: 39-507
Cow position: chrX:31948773-31949235 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 220

Conread position: 39-509
Cow position: chrX:40826589-40827053 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 61

Conread position: 39-516
Cow position: chrX:878222-878682 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 25

Conread position: 39-516
Cow position: chrX:15006990-15007464 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 34

Conread position: 39-516
Cow position: chrX:21064443-21063973 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 47

Conread position: 39-516
Cow position: chrX:24424245-24424705 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 10

Conread position: 39-516
Cow position: chrX:31489678-31489199 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 41

Conread position: 40-175
Cow position: chrX:32867032-32866899 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 40-291
Cow position: chrX:29050405-29050156 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 33

Conread position: 40-456
Cow position: chrX:41674262-41673850 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 37

Conread position: 40-496
Cow position: chrX:22482529-22482982 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 97

Conread position: 40-515
Cow position: chrX:38094364-38094837 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 31

Conread position: 40-516
Cow position: chrX:15597188-15596732 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 48

Conread position: 40-516
Cow position: chrX:34554884-34554422 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 60

Conread position: 40-516
Cow position: chrX:35269022-35268577 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 33

Conread position: 40-516
Cow position: chrX:37072546-37072093 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 41-401
Cow position: chrX:37780952-37781315 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 22

Conread position: 41-437
Cow position: chrX:32623728-32623349 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 31

Conread position: 41-437
Cow position: chrX:33493933-33493541 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 22

Conread position: 41-437
Cow position: chrX:41884256-41884652 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 24

Conread position: 41-440
Cow position: chrX:27771812-27772193 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 22

Conread position: 41-447
Cow position: chrX:45175008-45174600 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 235

Conread position: 41-471
Cow position: chrX:17542116-17541696 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 33

Conread position: 41-509
Cow position: chrX:32310264-32309795 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 153

Conread position: 41-516
Cow position: chrX:161568-161115 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 40

Conread position: 41-516
Cow position: chrX:45429865-45430331 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 23

Conread position: 42-291
Cow position: chrX:23113441-23113186 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 147, 24

Conread position: 42-360
Cow position: chrX:27945891-27946216 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 216
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 14, 292

Conread position: 42-365
Cow position: chrX:8917557-8917231 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 222
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 29, 164

Conread position: 42-411
Cow position: chrX:32420369-32420011 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 57

Conread position: 42-441
Cow position: chrX:19930799-19930419 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 275
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 122, 23

Conread position: 42-464
Cow position: chrX:47588869-47588440 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 266
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 250, 45

Conread position: 42-516
Cow position: chrX:9650869-9651358 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 20

Conread position: 42-516
Cow position: chrX:44054961-44054492 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 58

Conread position: 43-281
Cow position: chrX:18272901-18273139 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 92

Conread position: 43-335
Cow position: chrX:41871220-41870938 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 167, 13

Conread position: 43-353
Cow position: chrX:21986138-21986446 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 20

Conread position: 43-369
Cow position: chrX:14275587-14275901 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 219

Conread position: 43-375
Cow position: chrX:34792159-34792482 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 28

Conread position: 43-423
Cow position: chrX:23092027-23091661 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 187

Conread position: 43-516
Cow position: chrX:13177320-13177770 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 131

Conread position: 43-516
Cow position: chrX:41878778-41879243 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 28

Conread position: 43-516
Cow position: chrX:45502302-45501835 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 161

Conread position: 44-215
Cow position: chrX:16836136-16836303 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 156, 28

Conread position: 44-257
Cow position: chrX:19469353-19469563 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 44-296
Cow position: chrX:34836909-34837150 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 141, 0

Conread position: 44-343
Cow position: chrX:11614847-11614556 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 10, 25

Conread position: 44-352
Cow position: chrX:35822495-35822190 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 208
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 24, 76

Conread position: 44-440
Cow position: chrX:4768890-4768513 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 36

Conread position: 44-441
Cow position: chrX:43568073-43567701 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 265
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 365, 8

Conread position: 44-516
Cow position: chrX:20697454-20697916 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 54

Conread position: 45-368
Cow position: chrX:15231508-15231822 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 205
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 247, 40

Conread position: 48-436
Cow position: chrX:9201697-9201314 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 49-237
Cow position: chrX:11325947-11326137 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 49

Conread position: 49-278
Cow position: chrX:4152883-4153113 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 102, 15

Conread position: 49-411
Cow position: chrX:4825687-4826035 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 248
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 207, 14

Conread position: 49-427
Cow position: chrX:13191408-13191768 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 255
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 18, 93

Conread position: 49-434
Cow position: chrX:5900610-5900226 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 265
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 272, 15

Conread position: 49-462
Cow position: chrX:20152008-20151591 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 97

Conread position: 49-501
Cow position: chrX:41238205-41238661 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 90

Conread position: 49-512
Cow position: chrX:12437122-12437545 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 65

Conread position: 49-514
Cow position: chrX:20801918-20801466 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 18

Conread position: 49-514
Cow position: chrX:41192852-41192379 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 15

Conread position: 50-196
Cow position: chrX:29501737-29501878 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 50-331
Cow position: chrX:45977073-45976789 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 204
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 103, 25

Conread position: 50-514
Cow position: chrX:43527655-43527192 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 29

Conread position: 53-295
Cow position: chrX:38560705-38560462 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 146, 171

Conread position: 53-360
Cow position: chrX:36356249-36355959 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 212
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 16, 28

Conread position: 53-420
Cow position: chrX:45110800-45110438 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 11

Conread position: 53-436
Cow position: chrX:36976095-36975716 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 11

Conread position: 53-441
Cow position: chrX:45598461-45598842 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 258
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 189, 14

Conread position: 54-516
Cow position: chrX:31442686-31443133 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 26

Conread position: 55-516
Cow position: chrX:23583705-23583245 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 190

Conread position: 56-514
Cow position: chrX:29289721-29289265 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 32

Conread position: 57-347
Cow position: chrX:38066312-38066597 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 22, 173

Conread position: 57-412
Cow position: chrX:45846244-45845887 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 108

Conread position: 57-516
Cow position: chrX:11073049-11073518 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 180

Conread position: 57-516
Cow position: chrX:35288797-35288347 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 94

Conread position: 58-335
Cow position: chrX:37986366-37986098 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 201
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 148, 65

Conread position: 58-437
Cow position: chrX:22624619-22624247 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 191

Conread position: 58-439
Cow position: chrX:30420811-30421175 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 275
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 160, 91

Conread position: 58-514
Cow position: chrX:15329783-15329342 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 58-516
Cow position: chrX:14973605-14974041 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 86

Conread position: 59-265
Cow position: chrX:46429679-46429885 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 145, 188

Conread position: 59-440
Cow position: chrX:17662458-17662834 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 29

Conread position: 60-280
Cow position: chrX:36514753-36514974 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 148
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 73, 143

Conread position: 60-423
Cow position: chrX:46072678-46073042 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 255

Conread position: 62-508
Cow position: chrX:917231-917675 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 113

Conread position: 63-353
Cow position: chrX:20584464-20584169 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 63-415
Cow position: chrX:29121183-29120846 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 0

Conread position: 65-417
Cow position: chrX:7162190-7161858 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 237
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 135, 73

Conread position: 65-481
Cow position: chrX:8925833-8925428 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 16

Conread position: 65-516
Cow position: chrX:6544388-6543943 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 69

Conread position: 65-516
Cow position: chrX:37232541-37232098 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 122

Conread position: 65-516
Cow position: chrX:47481930-47481487 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 81

Conread position: 68-424
Cow position: chrX:37574971-37574635 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 128

Conread position: 73-237
Cow position: chrX:29585245-29585083 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 125, 0

Conread position: 73-331
Cow position: chrX:19273580-19273854 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 5, 0

Conread position: 73-441
Cow position: chrX:11938807-11939162 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 127

Conread position: 73-442
Cow position: chrX:39558223-39558587 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 40

Conread position: 73-508
Cow position: chrX:42469815-42470242 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 175

Conread position: 73-515
Cow position: chrX:47054399-47054828 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 299
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 137, 70

Conread position: 73-516
Cow position: chrX:35224422-35223989 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 120

Conread position: 79-394
Cow position: chrX:47362503-47362802 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 215
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 125, 167

Conread position: 80-266
Cow position: chrX:12082205-12082391 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 111, 59

Conread position: 80-328
Cow position: chrX:26493517-26493765 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 167
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 124, 21

Conread position: 82-456
Cow position: chrX:7722105-7721730 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 70

Conread position: 85-328
Cow position: chrX:45875506-45875263 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 198, 117

Conread position: 86-379
Cow position: chrX:30222240-30221951 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 199
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 8, 25

Conread position: 86-493
Cow position: chrX:4268951-4269357 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 12

Conread position: 86-515
Cow position: chrX:38071658-38072079 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 33

Conread position: 87-324
Cow position: chrX:48044403-48044636 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 178, 51

Conread position: 87-328
Cow position: chrX:38728846-38728609 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 7, 11

Conread position: 87-341
Cow position: chrX:21566519-21566261 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 111, 0

Conread position: 87-402
Cow position: chrX:45149280-45148976 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 216
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 202, 79

Conread position: 87-404
Cow position: chrX:47300791-47301104 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 7, 11

Conread position: 87-416
Cow position: chrX:37910557-37910239 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 153

Conread position: 87-432
Cow position: chrX:10959283-10959631 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 117

Conread position: 87-434
Cow position: chrX:32431736-32431396 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 240
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 116, 182

Conread position: 87-437
Cow position: chrX:21004796-21004450 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 157

Conread position: 87-437
Cow position: chrX:42011393-42011046 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 96

Conread position: 87-437
Cow position: chrX:43049443-43049108 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 246
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 60

Conread position: 87-439
Cow position: chrX:16283831-16284183 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 247
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 27, 56

Conread position: 87-442
Cow position: chrX:42492411-42492749 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 104

Conread position: 87-442
Cow position: chrX:48652609-48652966 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 11

Conread position: 87-445
Cow position: chrX:10302453-10302094 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 242
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 54, 21

Conread position: 87-471
Cow position: chrX:45403713-45404102 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 86

Conread position: 87-480
Cow position: chrX:35413722-35413353 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 57

Conread position: 87-489
Cow position: chrX:46722622-46723027 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 79

Conread position: 87-490
Cow position: chrX:48194923-48195328 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 250

Conread position: 87-504
Cow position: chrX:19690327-19689911 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 379, 98

Conread position: 87-504
Cow position: chrX:28111621-28111194 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 27

Conread position: 87-514
Cow position: chrX:7509251-7508815 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 39

Conread position: 87-515
Cow position: chrX:3130684-3130252 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 304
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 7, 11

Conread position: 87-515
Cow position: chrX:10411874-10412298 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 87-516
Cow position: chrX:7572017-7571593 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 206

Conread position: 87-516
Cow position: chrX:11082510-11082927 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 158

Conread position: 87-516
Cow position: chrX:25338299-25337864 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 21

Conread position: 87-516
Cow position: chrX:38936812-38936386 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 66

Conread position: 87-516
Cow position: chrX:41123171-41122759 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 69

Conread position: 87-516
Cow position: chrX:44736888-44737304 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 287
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 203, 84

Conread position: 87-516
Cow position: chrX:47967719-47967287 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 11

Conread position: 88-431
Cow position: chrX:24234373-24234706 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 224
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 32, 59

Conread position: 88-516
Cow position: chrX:27498883-27498455 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 89

Conread position: 89-386
Cow position: chrX:47165776-47166067 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 121, 99

Conread position: 89-435
Cow position: chrX:48010714-48010362 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 110

Conread position: 89-509
Cow position: chrX:47873226-47873647 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 110

Conread position: 89-516
Cow position: chrX:13913185-13912766 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 167

Conread position: 90-441
Cow position: chrX:17630692-17631040 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 11

Conread position: 90-509
Cow position: chrX:9161684-9161282 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 18

Conread position: 90-516
Cow position: chrX:26625562-26625998 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 172

Conread position: 90-516
Cow position: chrX:31260505-31260944 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 197

Conread position: 91-516
Cow position: chrX:33802901-33803328 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 7

Conread position: 92-402
Cow position: chrX:1499772-1499471 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 117

Conread position: 92-437
Cow position: chrX:6203647-6203321 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 231
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 82, 8

Conread position: 93-516
Cow position: chrX:46770858-46771285 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 5

Conread position: 94-509
Cow position: chrX:12826855-12826441 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 14

Conread position: 95-516
Cow position: chrX:3654711-3654295 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 8

Conread position: 97-291
Cow position: chrX:4296723-4296910 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 97-399
Cow position: chrX:7863479-7863768 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 204
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 193, 91

Conread position: 97-400
Cow position: chrX:16996594-16996310 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 193, 90

Conread position: 97-403
Cow position: chrX:31340812-31340505 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 105, 11

Conread position: 97-410
Cow position: chrX:45993332-45993006 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 234
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 27, 107

Conread position: 97-428
Cow position: chrX:21642380-21642703 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 233
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 186, 96

Conread position: 97-437
Cow position: chrX:1514317-1514638 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 247
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 193, 37

Conread position: 97-442
Cow position: chrX:21663396-21663070 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 248
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 193, 69

Conread position: 97-444
Cow position: chrX:27680500-27680162 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 162

Conread position: 97-468
Cow position: chrX:45392999-45393383 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 258
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 91, 173

Conread position: 97-470
Cow position: chrX:40183252-40183617 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 59

Conread position: 97-478
Cow position: chrX:7497344-7496974 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 11

Conread position: 97-500
Cow position: chrX:34454759-34454372 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 90

Conread position: 97-513
Cow position: chrX:15485532-15485935 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 59

Conread position: 97-514
Cow position: chrX:630208-630607 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 11

Conread position: 97-515
Cow position: chrX:2301026-2300619 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 285
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 94, 11

Conread position: 97-515
Cow position: chrX:19879140-19878725 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 281
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 104, 13

Conread position: 97-515
Cow position: chrX:28787451-28787055 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 285
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 11, 0

Conread position: 97-516
Cow position: chrX:23563689-23564110 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 111

Conread position: 97-516
Cow position: chrX:45089548-45089124 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 69

Conread position: 98-304
Cow position: chrX:31515275-31515065 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 45, 142

Conread position: 98-402
Cow position: chrX:43779746-43780051 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 195, 100

Conread position: 98-430
Cow position: chrX:11856531-11856202 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 151

Conread position: 99-344
Cow position: chrX:30263358-30263108 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 117

Conread position: 99-429
Cow position: chrX:4865333-4865025 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 222
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 311, 59

Conread position: 99-435
Cow position: chrX:26751505-26751849 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 223
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 128

Conread position: 99-442
Cow position: chrX:9041144-9041469 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 237
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 33, 28

Conread position: 99-499
Cow position: chrX:755064-754662 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 102

Conread position: 99-509
Cow position: chrX:11313685-11314084 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 28

Conread position: 99-516
Cow position: chrX:42733961-42733552 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 273
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 11, 108

Conread position: 100-515
Cow position: chrX:39545880-39546285 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 45

Conread position: 100-516
Cow position: chrX:47145184-47144762 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 293
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 270, 91

Conread position: 102-516
Cow position: chrX:26440688-26441093 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 47

Conread position: 102-516
Cow position: chrX:45113716-45113323 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 288
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 62, 97

Conread position: 103-252
Cow position: chrX:44095356-44095204 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 103-340
Cow position: chrX:27685345-27685107 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 17, 107

Conread position: 103-380
Cow position: chrX:36061256-36060975 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 114, 0

Conread position: 103-437
Cow position: chrX:40692655-40692972 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 230
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 96, 80

Conread position: 104-426
Cow position: chrX:6488671-6488363 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 232
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 144, 25

Conread position: 106-379
Cow position: chrX:15576641-15576369 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 175
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 186, 75

Conread position: 106-426
Cow position: chrX:6265506-6265809 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 104, 29

Conread position: 107-435
Cow position: chrX:27176220-27176552 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 230
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 70, 85

Conread position: 107-437
Cow position: chrX:29032503-29032183 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 224
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 88, 47

Conread position: 107-504
Cow position: chrX:30133226-30133625 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 112

Conread position: 107-509
Cow position: chrX:23414276-23414688 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 281
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 96, 136

Conread position: 107-515
Cow position: chrX:20377063-20376658 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 235

Conread position: 108-322
Cow position: chrX:40320497-40320283 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 91, 113

Conread position: 108-332
Cow position: chrX:48262697-48262474 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 180, 89

Conread position: 108-335
Cow position: chrX:36393251-36393482 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 56, 15

Conread position: 108-380
Cow position: chrX:45936236-45936498 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 159, 58

Conread position: 108-401
Cow position: chrX:33000996-33000706 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 21

Conread position: 108-401
Cow position: chrX:40809784-40809489 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 91, 244

Conread position: 108-410
Cow position: chrX:842248-841952 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 159, 90

Conread position: 108-412
Cow position: chrX:3147293-3146991 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 202
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 53

Conread position: 108-417
Cow position: chrX:25568299-25568613 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 200
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 79, 57

Conread position: 108-439
Cow position: chrX:15815175-15814861 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 82

Conread position: 108-456
Cow position: chrX:35258640-35258981 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 228
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 121, 101

Conread position: 108-469
Cow position: chrX:488595-488224 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 250

Conread position: 108-484
Cow position: chrX:2467975-2467599 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 65

Conread position: 108-489
Cow position: chrX:36514568-36514167 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 254
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 108-498
Cow position: chrX:2944773-2945163 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 255
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 75, 69

Conread position: 108-498
Cow position: chrX:18195006-18194618 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 65

Conread position: 108-498
Cow position: chrX:23264342-23264732 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 65

Conread position: 108-498
Cow position: chrX:27319325-27318920 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 238
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 108-502
Cow position: chrX:1175892-1176273 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 108-504
Cow position: chrX:32170798-32171183 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 26

Conread position: 108-509
Cow position: chrX:11844150-11844544 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 143

Conread position: 108-512
Cow position: chrX:48248914-48248514 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 270
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 32, 53

Conread position: 108-514
Cow position: chrX:14407357-14407761 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 263
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 107, 61

Conread position: 108-516
Cow position: chrX:2425027-2425435 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 113

Conread position: 108-516
Cow position: chrX:5291791-5292204 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 266
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 103, 39

Conread position: 108-516
Cow position: chrX:6493827-6493419 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 271
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 102, 144

Conread position: 108-516
Cow position: chrX:7178987-7178599 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 50

Conread position: 108-516
Cow position: chrX:16853290-16853702 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 270
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 184, 113

Conread position: 108-516
Cow position: chrX:18118377-18118785 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 113

Conread position: 108-516
Cow position: chrX:18897560-18897964 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 113

Conread position: 108-516
Cow position: chrX:21416194-21415775 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 278
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 72, 42

Conread position: 108-516
Cow position: chrX:21833980-21833572 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 111

Conread position: 108-516
Cow position: chrX:22494102-22493694 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 101

Conread position: 108-516
Cow position: chrX:22821509-22821101 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 35

Conread position: 108-516
Cow position: chrX:27976736-27977142 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 262
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 184, 65

Conread position: 108-516
Cow position: chrX:34662755-34663172 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 87

Conread position: 108-516
Cow position: chrX:35240956-35240551 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 65

Conread position: 108-516
Cow position: chrX:37843808-37843407 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 15

Conread position: 108-516
Cow position: chrX:40544513-40544923 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 114

Conread position: 108-516
Cow position: chrX:41103885-41103475 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 266
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 80, 243

Conread position: 108-516
Cow position: chrX:41157406-41156998 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 111

Conread position: 108-516
Cow position: chrX:45373193-45373605 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 100

Conread position: 109-352
Cow position: chrX:18425848-18426090 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 183, 112

Conread position: 109-364
Cow position: chrX:24788486-24788235 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 183, 70

Conread position: 109-369
Cow position: chrX:10129098-10128839 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 183, 112

Conread position: 109-379
Cow position: chrX:30134082-30134348 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 183, 68

Conread position: 109-394
Cow position: chrX:44656867-44657155 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 89, 72

Conread position: 109-402
Cow position: chrX:47302787-47303078 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 181, 90

Conread position: 109-412
Cow position: chrX:29542127-29542427 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 234

Conread position: 109-412
Cow position: chrX:41271566-41271867 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 196
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 33

Conread position: 109-427
Cow position: chrX:18650951-18651266 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 209
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 299, 113

Conread position: 109-433
Cow position: chrX:12405291-12405599 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 103, 90

Conread position: 109-436
Cow position: chrX:27480536-27480857 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 208
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 183, 101

Conread position: 109-437
Cow position: chrX:24132060-24132385 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 218
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 70, 92

Conread position: 109-470
Cow position: chrX:16734650-16734290 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 239
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 78, 68

Conread position: 109-476
Cow position: chrX:37415982-37416348 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 41

Conread position: 109-507
Cow position: chrX:20030344-20029943 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 278
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 22, 31

Conread position: 109-509
Cow position: chrX:11820442-11820052 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 273
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 77, 85

Conread position: 109-509
Cow position: chrX:16783581-16783188 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 112

Conread position: 109-515
Cow position: chrX:16078751-16078357 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 262
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 183, 49

Conread position: 109-515
Cow position: chrX:16289471-16289874 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 55

Conread position: 109-516
Cow position: chrX:7053646-7054048 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 37

Conread position: 109-516
Cow position: chrX:18245076-18244676 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 268
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 183, 98

Conread position: 109-516
Cow position: chrX:19290852-19290459 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 275
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 183, 100

Conread position: 109-516
Cow position: chrX:20945655-20945255 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 90

Conread position: 109-516
Cow position: chrX:23300048-23299641 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 98

Conread position: 109-516
Cow position: chrX:27106349-27105945 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 68

Conread position: 109-516
Cow position: chrX:34238809-34238407 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 152

Conread position: 109-516
Cow position: chrX:39071784-39071370 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 264
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 183, 101

Conread position: 109-516
Cow position: chrX:39174129-39174526 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 268
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 183, 85

Conread position: 109-516
Cow position: chrX:40179789-40180183 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 273
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 183, 98

Conread position: 109-516
Cow position: chrX:40648740-40648353 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 279
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 74, 63

Conread position: 110-428
Cow position: chrX:34995415-34995098 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 198
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 112

Conread position: 110-436
Cow position: chrX:29858885-29859210 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 206
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 27, 19

Conread position: 110-498
Cow position: chrX:6037829-6038217 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 255
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 26, 17

Conread position: 110-504
Cow position: chrX:42121396-42121002 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 17

Conread position: 110-508
Cow position: chrX:2558871-2559265 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 264
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 25, 19

Conread position: 110-508
Cow position: chrX:9168523-9168919 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 259
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 25, 17

Conread position: 110-508
Cow position: chrX:17995552-17995154 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 17

Conread position: 110-508
Cow position: chrX:21768896-21768499 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 266
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 25, 17

Conread position: 110-508
Cow position: chrX:27594089-27594485 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 111

Conread position: 110-508
Cow position: chrX:34519818-34519421 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 261
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 25, 19

Conread position: 110-509
Cow position: chrX:6869469-6869869 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 255
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 19

Conread position: 110-509
Cow position: chrX:15114763-15114365 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 250
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 182, 23

Conread position: 110-516
Cow position: chrX:3894883-3895289 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 268
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 19

Conread position: 110-516
Cow position: chrX:14134568-14134162 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 259
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 182, 111

Conread position: 110-516
Cow position: chrX:14598938-14598532 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 266
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 25, 15

Conread position: 110-516
Cow position: chrX:15531064-15531468 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 16

Conread position: 110-516
Cow position: chrX:23122484-23122071 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 375

Conread position: 110-516
Cow position: chrX:27306019-27305613 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 265
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 25, 19

Conread position: 110-516
Cow position: chrX:28025354-28024950 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 254
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 182, 111

Conread position: 110-516
Cow position: chrX:32011124-32010718 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 17

Conread position: 110-516
Cow position: chrX:35533944-35533538 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 17

Conread position: 110-516
Cow position: chrX:36373653-36373231 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 277
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 182, 107

Conread position: 110-516
Cow position: chrX:47361802-47362199 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 267
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 70, 66

Conread position: 111-376
Cow position: chrX:41418013-41417745 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 177
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 28, 95

Conread position: 111-508
Cow position: chrX:6567166-6566769 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 263
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 24, 16

Conread position: 111-516
Cow position: chrX:21625861-21626272 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 270
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 182, 35

Conread position: 111-516
Cow position: chrX:29049107-29048719 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 271
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 181, 98

Conread position: 112-437
Cow position: chrX:47248700-47249022 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 226
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 93, 18

Conread position: 112-509
Cow position: chrX:20710161-20709769 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 59

Conread position: 112-514
Cow position: chrX:32188273-32188670 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 270
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 71, 65

Conread position: 114-311
Cow position: chrX:4991928-4992127 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 105, 83

Conread position: 114-516
Cow position: chrX:5638084-5638481 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 90

Conread position: 114-516
Cow position: chrX:42507563-42507957 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 83

Conread position: 115-383
Cow position: chrX:48044115-48044379 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 38, 31

Conread position: 115-479
Cow position: chrX:48800622-48800261 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 252
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 23, 128

Conread position: 115-489
Cow position: chrX:45939365-45939732 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 242
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 9

Conread position: 116-516
Cow position: chrX:13785280-13785691 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 15

Conread position: 119-326
Cow position: chrX:19003375-19003174 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 120-439
Cow position: chrX:11589509-11589828 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 82

Conread position: 121-464
Cow position: chrX:678477-678831 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 135

Conread position: 123-508
Cow position: chrX:24105700-24105321 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 77

Conread position: 125-437
Cow position: chrX:9855370-9855066 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 16

Conread position: 125-480
Cow position: chrX:12018366-12017998 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 92

Conread position: 126-396
Cow position: chrX:37541191-37540932 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 164, 49

Conread position: 126-503
Cow position: chrX:6234376-6234735 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 198

Conread position: 128-508
Cow position: chrX:13195895-13196276 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 252
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 7, 94

Conread position: 129-441
Cow position: chrX:26875811-26876119 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 213

Conread position: 129-508
Cow position: chrX:12775913-12776291 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 254
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 5, 45

Conread position: 129-516
Cow position: chrX:28752264-28752653 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 247
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 5, 93

Conread position: 130-466
Cow position: chrX:7361796-7362116 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 233
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 45, 30

Conread position: 131-504
Cow position: chrX:29876009-29876352 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 260
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 0

Conread position: 131-516
Cow position: chrX:1810092-1810474 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 69

Conread position: 133-441
Cow position: chrX:11691572-11691267 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 197
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 159, 82

Conread position: 133-509
Cow position: chrX:20038149-20038524 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 252
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 96, 84

Conread position: 133-516
Cow position: chrX:20320698-20321080 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 88

Conread position: 133-516
Cow position: chrX:20743056-20742673 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 88

Conread position: 133-516
Cow position: chrX:29778113-29777729 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 250
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 108, 84

Conread position: 134-390
Cow position: chrX:48035490-48035241 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 171
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 134-481
Cow position: chrX:26709676-26709326 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 234
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 23, 46

Conread position: 134-508
Cow position: chrX:19022240-19022614 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 87

Conread position: 134-515
Cow position: chrX:30163065-30162685 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 57

Conread position: 135-308
Cow position: chrX:20790977-20790813 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 135-433
Cow position: chrX:11454978-11455282 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 205
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 215

Conread position: 135-480
Cow position: chrX:6674855-6675202 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 229
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 69, 49

Conread position: 135-516
Cow position: chrX:34192734-34192368 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 46

Conread position: 136-379
Cow position: chrX:20331754-20331996 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 156, 85

Conread position: 136-453
Cow position: chrX:5288090-5288407 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 206
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 156, 81

Conread position: 136-453
Cow position: chrX:22857105-22856782 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 214
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 84, 0

Conread position: 136-470
Cow position: chrX:5300959-5300625 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 218
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 156, 85

Conread position: 136-470
Cow position: chrX:22816008-22815674 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 220
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 156, 85

Conread position: 136-481
Cow position: chrX:34175131-34175476 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 227
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 156, 85

Conread position: 136-486
Cow position: chrX:36931380-36931035 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 221
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 156, 79

Conread position: 136-504
Cow position: chrX:15577574-15577942 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 242
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 156, 85

Conread position: 136-507
Cow position: chrX:46297727-46297356 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 239
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 156, 85

Conread position: 136-508
Cow position: chrX:11664245-11663873 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 85

Conread position: 136-508
Cow position: chrX:14409322-14409692 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 245
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 131, 79

Conread position: 136-508
Cow position: chrX:16074643-16074271 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 247
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 156, 85

Conread position: 136-508
Cow position: chrX:24968749-24969121 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 85

Conread position: 136-508
Cow position: chrX:30822651-30822279 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 85

Conread position: 136-508
Cow position: chrX:37853194-37852834 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 241
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 156, 81

Conread position: 136-509
Cow position: chrX:5319649-5320024 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 239
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 156, 85

Conread position: 136-513
Cow position: chrX:14121685-14122062 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 247
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 156, 85

Conread position: 136-515
Cow position: chrX:25232656-25232274 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 193

Conread position: 136-516
Cow position: chrX:828954-828579 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 249
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 156, 85

Conread position: 136-516
Cow position: chrX:3417073-3417452 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 246
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 156, 85

Conread position: 136-516
Cow position: chrX:7445150-7444771 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 251
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 156, 86

Conread position: 136-516
Cow position: chrX:11145271-11145651 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 247
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 156, 85

Conread position: 136-516
Cow position: chrX:13971160-13971540 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 85

Conread position: 136-516
Cow position: chrX:14152155-14152528 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 248
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 156, 86

Conread position: 136-516
Cow position: chrX:14800751-14801131 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 255
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 156, 85

Conread position: 136-516
Cow position: chrX:15438586-15438962 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 250
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 156, 85

Conread position: 136-516
Cow position: chrX:17055636-17055256 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 245
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 156, 85

Conread position: 136-516
Cow position: chrX:19196451-19196831 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 255
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 131, 85

Conread position: 136-516
Cow position: chrX:21686681-21686307 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 251
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 44, 40

Conread position: 136-516
Cow position: chrX:22772722-22772342 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 249
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 156, 85

Conread position: 136-516
Cow position: chrX:22888724-22888345 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 79

Conread position: 136-516
Cow position: chrX:24768797-24769173 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 253
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 156, 85

Conread position: 136-516
Cow position: chrX:28589046-28588657 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 252
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 156, 85

Conread position: 136-516
Cow position: chrX:29084187-29083812 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 251
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 156, 85

Conread position: 136-516
Cow position: chrX:31813822-31814202 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 250
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 157, 85

Conread position: 136-516
Cow position: chrX:34762133-34761753 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 254
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 150, 85

Conread position: 136-516
Cow position: chrX:37816655-37816275 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 252
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 156, 85

Conread position: 136-516
Cow position: chrX:42166142-42165762 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 250
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 156, 85

Conread position: 136-516
Cow position: chrX:42460248-42459859 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 255
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 93, 67

Conread position: 136-516
Cow position: chrX:46578788-46579168 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 85

Conread position: 138-516
Cow position: chrX:35610053-35609673 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 202

Conread position: 139-292
Cow position: chrX:45648934-45648781 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 112

Conread position: 139-445
Cow position: chrX:41166902-41167207 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 105

Conread position: 139-486
Cow position: chrX:37836646-37836306 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 57

Conread position: 139-516
Cow position: chrX:7718909-7718543 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 59

Conread position: 139-516
Cow position: chrX:19188991-19188623 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 54

Conread position: 140-508
Cow position: chrX:39954474-39954843 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 129
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 275, 0

Conread position: 140-516
Cow position: chrX:525757-525363 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 271
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 152, 37

Conread position: 141-379
Cow position: chrX:1827394-1827158 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 155
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 151, 62

Conread position: 141-439
Cow position: chrX:30689403-30689105 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 191
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 151, 80

Conread position: 141-440
Cow position: chrX:21891728-21892026 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 192
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 151, 70

Conread position: 141-444
Cow position: chrX:13927711-13928013 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 190
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 151, 80

Conread position: 141-454
Cow position: chrX:47053873-47054190 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 203
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 36

Conread position: 141-489
Cow position: chrX:20021625-20021277 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 232
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 151, 80

Conread position: 141-502
Cow position: chrX:2812350-2812710 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 237
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 151, 80

Conread position: 141-504
Cow position: chrX:5288625-5288988 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 74

Conread position: 141-504
Cow position: chrX:7486926-7486563 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 239
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 155, 80

Conread position: 141-504
Cow position: chrX:8484138-8483787 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 239
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 151, 83

Conread position: 141-504
Cow position: chrX:30197359-30196996 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 74

Conread position: 141-508
Cow position: chrX:5279792-5280158 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 239
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 151, 80

Conread position: 141-508
Cow position: chrX:8641849-8641483 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 243
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 151, 80

Conread position: 141-508
Cow position: chrX:9129118-9128751 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 245
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 151, 80

Conread position: 141-508
Cow position: chrX:12347936-12347573 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 238
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 151, 80

Conread position: 141-508
Cow position: chrX:12851194-12850827 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 80

Conread position: 141-508
Cow position: chrX:14458112-14458472 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 246
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 151, 80

Conread position: 141-508
Cow position: chrX:18461914-18462280 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 80

Conread position: 141-508
Cow position: chrX:24447861-24447496 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 238
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 53, 47

Conread position: 141-508
Cow position: chrX:26974972-26974605 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 240
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 151, 76

Conread position: 141-508
Cow position: chrX:29913407-29913034 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 236
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 141-508
Cow position: chrX:30752836-30752469 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 80

Conread position: 141-509
Cow position: chrX:47385872-47386237 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 246
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 151, 80

Conread position: 141-514
Cow position: chrX:21011259-21011633 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 250
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 151, 79

Conread position: 141-516
Cow position: chrX:5739151-5739526 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 152, 80

Conread position: 141-516
Cow position: chrX:8434145-8434520 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 238
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 151, 80

Conread position: 141-516
Cow position: chrX:8591607-8591227 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 248
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 151, 80

Conread position: 141-516
Cow position: chrX:10428601-10428227 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 80

Conread position: 141-516
Cow position: chrX:10527713-10528087 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 249
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 151, 80

Conread position: 141-516
Cow position: chrX:14781283-14781658 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 80

Conread position: 141-516
Cow position: chrX:16358953-16359322 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 248
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 151, 80

Conread position: 141-516
Cow position: chrX:26276200-26275826 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 76

Conread position: 141-516
Cow position: chrX:30171648-30172023 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 76

Conread position: 141-516
Cow position: chrX:30686531-30686909 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 35

Conread position: 141-516
Cow position: chrX:38230205-38230580 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 249
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 151, 80

Conread position: 141-516
Cow position: chrX:40591738-40591373 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 249
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 274, 80

Conread position: 141-516
Cow position: chrX:43767475-43767850 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 80

Conread position: 141-516
Cow position: chrX:43979681-43979305 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 252
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 151, 32

Conread position: 142-459
Cow position: chrX:46424693-46425009 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 209
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 150, 79

Conread position: 142-508
Cow position: chrX:4343810-4343444 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 79

Conread position: 143-484
Cow position: chrX:42875039-42874697 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 55

Conread position: 144-375
Cow position: chrX:47303575-47303805 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 148, 77

Conread position: 144-379
Cow position: chrX:7562469-7562709 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 144-426
Cow position: chrX:34135081-34135363 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 181
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 148, 77

Conread position: 144-462
Cow position: chrX:30244998-30245314 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 208
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 148, 71

Conread position: 144-476
Cow position: chrX:15094425-15094093 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 223
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 148, 77

Conread position: 144-483
Cow position: chrX:22915525-22915185 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 225
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 148, 77

Conread position: 144-484
Cow position: chrX:10293103-10293443 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 227
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 148, 77

Conread position: 144-508
Cow position: chrX:5423007-5423371 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 244
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 148, 77

Conread position: 144-508
Cow position: chrX:5598919-5599283 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 77

Conread position: 144-508
Cow position: chrX:12001088-12001452 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 77

Conread position: 144-508
Cow position: chrX:27403887-27404250 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 77

Conread position: 144-508
Cow position: chrX:37060732-37061096 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 77

Conread position: 147-454
Cow position: chrX:16084605-16084912 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 199
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 145, 68

Conread position: 147-483
Cow position: chrX:40648038-40647698 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 53

Conread position: 147-508
Cow position: chrX:34413832-34413471 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 74

Conread position: 147-509
Cow position: chrX:39549376-39549024 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 242
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 145, 74

Conread position: 147-515
Cow position: chrX:39701276-39700906 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 257
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 58, 37

Conread position: 147-516
Cow position: chrX:41199158-41198773 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 276
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 71, 52

Conread position: 149-352
Cow position: chrX:2654894-2655096 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 143, 72

Conread position: 149-375
Cow position: chrX:16009920-16010148 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 124, 72

Conread position: 149-376
Cow position: chrX:37750204-37750426 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 62, 141

Conread position: 149-379
Cow position: chrX:19079751-19079980 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 153
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 143, 72

Conread position: 149-379
Cow position: chrX:31606206-31605977 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 150
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 143, 72

Conread position: 149-411
Cow position: chrX:26286032-26285772 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 9, 98

Conread position: 149-417
Cow position: chrX:12485075-12485351 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 180
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 149-417
Cow position: chrX:27352539-27352271 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 176
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 143, 72

Conread position: 149-426
Cow position: chrX:238824-239101 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 143, 72

Conread position: 149-436
Cow position: chrX:13057623-13057336 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 180
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 143, 72

Conread position: 149-441
Cow position: chrX:23827643-23827351 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 195
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 143, 72

Conread position: 149-448
Cow position: chrX:45424771-45425070 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 193
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 144, 72

Conread position: 149-465
Cow position: chrX:22521045-22521361 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 206
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 143, 72

Conread position: 149-470
Cow position: chrX:2580453-2580132 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 210
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 143, 72

Conread position: 149-476
Cow position: chrX:16835526-16835204 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 212
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 143, 72

Conread position: 149-481
Cow position: chrX:23702711-23703043 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 225
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 143, 72

Conread position: 149-504
Cow position: chrX:3371805-3372158 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 236
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 20, 25

Conread position: 149-508
Cow position: chrX:1781960-1781600 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 72

Conread position: 149-508
Cow position: chrX:2150881-2151237 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 240
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 143, 73

Conread position: 149-508
Cow position: chrX:5867199-5866841 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 72

Conread position: 149-508
Cow position: chrX:7312047-7311688 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 72

Conread position: 149-508
Cow position: chrX:10496287-10495928 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 72

Conread position: 149-508
Cow position: chrX:10932726-10932367 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 243
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 143, 72

Conread position: 149-508
Cow position: chrX:11672835-11672476 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 143, 72

Conread position: 149-508
Cow position: chrX:12360943-12360584 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 237
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 143, 72

Conread position: 149-508
Cow position: chrX:13070548-13070906 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 239
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 143, 72

Conread position: 149-508
Cow position: chrX:13091108-13091466 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 143, 72

Conread position: 149-508
Cow position: chrX:13396199-13396557 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 72

Conread position: 149-508
Cow position: chrX:15259565-15259924 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 143, 72

Conread position: 149-508
Cow position: chrX:15505345-15504986 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 72

Conread position: 149-508
Cow position: chrX:16047203-16046843 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 228
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 143, 72

Conread position: 149-508
Cow position: chrX:16286263-16285904 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 72

Conread position: 149-508
Cow position: chrX:16735578-16735219 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 143, 66

Conread position: 149-508
Cow position: chrX:19473106-19473466 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 72

Conread position: 149-508
Cow position: chrX:20616743-20617102 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 72

Conread position: 149-508
Cow position: chrX:27759761-27759402 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 72

Conread position: 149-508
Cow position: chrX:29356641-29356282 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 72

Conread position: 149-508
Cow position: chrX:29508831-29508478 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 143, 72

Conread position: 149-508
Cow position: chrX:30816215-30816574 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 237
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 143, 72

Conread position: 149-508
Cow position: chrX:30981111-30981470 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 72

Conread position: 149-508
Cow position: chrX:35803874-35803509 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 124

Conread position: 149-508
Cow position: chrX:39731567-39731208 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 72

Conread position: 149-508
Cow position: chrX:43511473-43511115 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 241
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 143, 72

Conread position: 149-508
Cow position: chrX:44168255-44168614 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 72

Conread position: 149-508
Cow position: chrX:48328333-48328692 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 72

Conread position: 149-513
Cow position: chrX:15172479-15172837 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 235
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 143, 72

Conread position: 149-515
Cow position: chrX:28105968-28105614 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 149-516
Cow position: chrX:4621900-4622267 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 72

Conread position: 149-516
Cow position: chrX:5306653-5306286 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 239
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 143, 72

Conread position: 149-516
Cow position: chrX:8530594-8530227 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 245
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 143, 73

Conread position: 149-516
Cow position: chrX:27627407-27627042 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 245
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 143, 66

Conread position: 149-516
Cow position: chrX:29903797-29903429 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 240
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 34, 28

Conread position: 149-516
Cow position: chrX:36240449-36240082 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 72

Conread position: 149-516
Cow position: chrX:38015148-38014781 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 72

Conread position: 149-516
Cow position: chrX:44388039-44387677 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 238
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 147, 72

Conread position: 149-516
Cow position: chrX:44558133-44557766 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 248
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 143, 72

Conread position: 151-448
Cow position: chrX:28769567-28769868 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 193
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 29, 19

Conread position: 152-410
Cow position: chrX:36961688-36961428 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 52

Conread position: 152-432
Cow position: chrX:11746892-11746613 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 115, 6

Conread position: 152-433
Cow position: chrX:5274299-5274022 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 179
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 140, 45

Conread position: 152-439
Cow position: chrX:20752302-20752027 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 12

Conread position: 152-457
Cow position: chrX:2575897-2576199 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 196
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 45, 70

Conread position: 152-478
Cow position: chrX:22549353-22549029 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 214
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 140, 48

Conread position: 152-478
Cow position: chrX:34270449-34270141 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 138, 84

Conread position: 152-478
Cow position: chrX:47191360-47191670 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 239
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 31, 26

Conread position: 152-484
Cow position: chrX:17605510-17605842 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 222
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 140, 69

Conread position: 152-499
Cow position: chrX:16478953-16478606 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 69

Conread position: 152-501
Cow position: chrX:19015484-19015144 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 86

Conread position: 152-504
Cow position: chrX:48243419-48243753 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 262, 52

Conread position: 152-508
Cow position: chrX:1576212-1576568 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 69

Conread position: 152-508
Cow position: chrX:5333771-5334124 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 240
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 140, 50

Conread position: 152-508
Cow position: chrX:5646051-5646409 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 71

Conread position: 152-508
Cow position: chrX:6195703-6196059 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 69

Conread position: 152-508
Cow position: chrX:12458751-12458393 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 233
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 144, 0

Conread position: 152-508
Cow position: chrX:20031783-20032136 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 236
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 84, 70

Conread position: 152-508
Cow position: chrX:22608539-22608897 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 71

Conread position: 152-508
Cow position: chrX:23109810-23109457 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 71

Conread position: 152-508
Cow position: chrX:24757646-24758002 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 69

Conread position: 152-508
Cow position: chrX:25276448-25276804 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 69

Conread position: 152-508
Cow position: chrX:29226523-29226171 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 242
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 140, 48

Conread position: 152-508
Cow position: chrX:30538099-30538457 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 71

Conread position: 152-508
Cow position: chrX:34285012-34285369 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 140, 69

Conread position: 152-508
Cow position: chrX:37764146-37764502 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 235
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 140, 68

Conread position: 152-509
Cow position: chrX:30158960-30159317 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 69

Conread position: 152-515
Cow position: chrX:35681389-35681023 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 181

Conread position: 152-515
Cow position: chrX:42994660-42994302 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 57

Conread position: 152-516
Cow position: chrX:5123310-5123674 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 69

Conread position: 152-516
Cow position: chrX:11715411-11715775 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 244
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 140, 63

Conread position: 152-516
Cow position: chrX:12146145-12145782 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 69

Conread position: 152-516
Cow position: chrX:15139500-15139861 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 46

Conread position: 152-516
Cow position: chrX:26229463-26229821 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 248
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 140, 69

Conread position: 152-516
Cow position: chrX:28845880-28845531 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 157

Conread position: 152-516
Cow position: chrX:40452171-40452526 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 39

Conread position: 153-437
Cow position: chrX:15037694-15037977 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 188
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 139, 47

Conread position: 153-493
Cow position: chrX:44834760-44835106 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 237
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 46, 14

Conread position: 153-515
Cow position: chrX:43409055-43408689 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 253
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 51, 200

Conread position: 154-361
Cow position: chrX:8913968-8913762 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 108

Conread position: 154-361
Cow position: chrX:8915712-8915506 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 108

Conread position: 154-396
Cow position: chrX:45875041-45874806 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 142, 17

Conread position: 154-442
Cow position: chrX:30862361-30862063 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 30

Conread position: 154-508
Cow position: chrX:30899338-30899693 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 67

Conread position: 155-402
Cow position: chrX:28835858-28836099 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 47, 116

Conread position: 155-434
Cow position: chrX:15997207-15996923 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 137, 60

Conread position: 155-442
Cow position: chrX:26940460-26940730 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 254, 39

Conread position: 155-516
Cow position: chrX:18999932-18999585 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 137, 52

Conread position: 156-344
Cow position: chrX:32215241-32215053 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 51, 46

Conread position: 156-380
Cow position: chrX:16514219-16514441 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 43, 8

Conread position: 156-434
Cow position: chrX:18456449-18456161 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 43, 0

Conread position: 156-442
Cow position: chrX:40789255-40788964 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 43, 33

Conread position: 156-516
Cow position: chrX:32743581-32743225 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 25

Conread position: 156-516
Cow position: chrX:34991079-34990728 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 91

Conread position: 157-352
Cow position: chrX:1464431-1464237 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 135, 64

Conread position: 157-352
Cow position: chrX:46626377-46626571 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 135, 64

Conread position: 157-370
Cow position: chrX:22421454-22421666 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 135, 64

Conread position: 157-379
Cow position: chrX:11982610-11982389 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 147
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 135, 64

Conread position: 157-380
Cow position: chrX:16222075-16221853 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 135, 64

Conread position: 157-380
Cow position: chrX:38897035-38897257 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 135, 64

Conread position: 157-412
Cow position: chrX:40567640-40567391 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 136, 41

Conread position: 157-426
Cow position: chrX:24450129-24450398 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 135, 64

Conread position: 157-454
Cow position: chrX:39520409-39520706 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 199
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 135, 64

Conread position: 157-470
Cow position: chrX:19333124-19333436 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 217
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 12, 17

Conread position: 157-481
Cow position: chrX:33983560-33983884 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 135, 64

Conread position: 157-484
Cow position: chrX:1749463-1749790 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 225
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 135, 64

Conread position: 157-493
Cow position: chrX:24904130-24903794 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 232
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 135, 64

Conread position: 157-494
Cow position: chrX:41413738-41414075 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 225
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 135, 64

Conread position: 157-500
Cow position: chrX:35498132-35497789 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-504
Cow position: chrX:2362545-2362198 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-504
Cow position: chrX:13448316-13447969 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:361407-361758 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:1975552-1975902 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:2417438-2417789 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:3078542-3078892 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 237
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:3157664-3157313 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:3388152-3387801 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 37

Conread position: 157-508
Cow position: chrX:5407101-5406753 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 236
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:7510182-7509832 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:9018257-9018608 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:9085288-9085638 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 238
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 135, 45

Conread position: 157-508
Cow position: chrX:10922525-10922876 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:11358013-11358370 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 157-508
Cow position: chrX:11860196-11860547 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:12033017-12032666 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:13385454-13385102 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 239
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 32, 47

Conread position: 157-508
Cow position: chrX:15781627-15781276 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:18451045-18451384 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 237
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:19774434-19774785 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:20099368-20099017 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:22557547-22557196 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:22613431-22613081 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 232
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:23140355-23140008 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 257, 64

Conread position: 157-508
Cow position: chrX:24967315-24966964 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:28057749-28058100 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:29844430-29844781 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:30837409-30837068 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 232
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 155, 58

Conread position: 157-508
Cow position: chrX:30941229-30940876 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 235
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 44, 66

Conread position: 157-508
Cow position: chrX:33764390-33764039 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:34095607-34095256 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:36479978-36479627 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:36730432-36730079 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:37497401-37497752 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:37772387-37772739 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 239
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:37958543-37958192 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:38443008-38442657 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:39667147-39667498 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 58

Conread position: 157-508
Cow position: chrX:41488120-41488470 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-508
Cow position: chrX:48165569-48165218 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 157-509
Cow position: chrX:16789813-16790128 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 245
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 157-516
Cow position: chrX:32127950-32128307 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 264
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 274, 41

Conread position: 157-516
Cow position: chrX:47744134-47743764 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 243
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 46, 181

Conread position: 158-378
Cow position: chrX:46146520-46146735 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 44, 127

Conread position: 158-391
Cow position: chrX:41992005-41992228 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 135, 33

Conread position: 158-409
Cow position: chrX:39938482-39938728 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 25, 20

Conread position: 158-417
Cow position: chrX:8070658-8070914 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 134, 48

Conread position: 158-434
Cow position: chrX:14900689-14900952 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 40, 0

Conread position: 158-437
Cow position: chrX:9954180-9953907 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 135, 81

Conread position: 158-452
Cow position: chrX:44850631-44850925 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 194
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 30, 11

Conread position: 158-496
Cow position: chrX:157731-158063 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 231
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 36, 156

Conread position: 158-502
Cow position: chrX:14222117-14221784 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 63

Conread position: 158-504
Cow position: chrX:28157539-28157184 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 13

Conread position: 158-514
Cow position: chrX:21227515-21227161 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 241
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 64, 29

Conread position: 158-515
Cow position: chrX:17498126-17497784 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 70

Conread position: 158-515
Cow position: chrX:42461703-42462060 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 46

Conread position: 159-352
Cow position: chrX:29056158-29055971 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 109

Conread position: 159-412
Cow position: chrX:2186294-2186050 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 103

Conread position: 159-437
Cow position: chrX:21816307-21816027 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 182
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 247

Conread position: 159-442
Cow position: chrX:38840924-38840649 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 108, 14

Conread position: 159-515
Cow position: chrX:11675106-11674746 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 250
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 39, 97

Conread position: 159-516
Cow position: chrX:47379427-47379780 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 251
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 104, 181

Conread position: 160-437
Cow position: chrX:23970418-23970155 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 92

Conread position: 160-516
Cow position: chrX:21063255-21062904 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 238
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 132, 11

Conread position: 161-455
Cow position: chrX:37956396-37956115 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 195
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 162-428
Cow position: chrX:20791778-20792043 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 38, 101

Conread position: 163-359
Cow position: chrX:35969050-35969238 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 37

Conread position: 163-483
Cow position: chrX:9997298-9997611 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 45

Conread position: 163-508
Cow position: chrX:36196138-36195787 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 163-508
Cow position: chrX:41743950-41743608 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 167

Conread position: 163-516
Cow position: chrX:45412625-45412965 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 248
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 150, 28

Conread position: 164-433
Cow position: chrX:37048546-37048811 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 240, 27

Conread position: 165-460
Cow position: chrX:46381743-46382033 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 200
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 77

Conread position: 165-504
Cow position: chrX:17271247-17271590 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 84

Conread position: 166-441
Cow position: chrX:30832819-30833076 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 32, 0

Conread position: 166-507
Cow position: chrX:38439514-38439169 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 166-516
Cow position: chrX:10306708-10306360 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 32

Conread position: 168-440
Cow position: chrX:40116448-40116188 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 32, 60

Conread position: 172-402
Cow position: chrX:17908261-17908482 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 30, 0

Conread position: 172-441
Cow position: chrX:44053287-44053020 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 35, 158

Conread position: 172-442
Cow position: chrX:47756901-47757168 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 121, 37

Conread position: 172-515
Cow position: chrX:13322968-13323331 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 246
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 45, 102

Conread position: 173-348
Cow position: chrX:10278837-10278666 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 120, 36

Conread position: 173-412
Cow position: chrX:45015602-45015378 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 110, 29

Conread position: 173-417
Cow position: chrX:10123327-10123561 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 120, 42

Conread position: 173-434
Cow position: chrX:47538861-47538600 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 15, 21

Conread position: 173-453
Cow position: chrX:27324755-27325035 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 89, 48

Conread position: 173-474
Cow position: chrX:10096058-10095755 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 206
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 110

Conread position: 173-483
Cow position: chrX:28098141-28097845 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 89

Conread position: 173-497
Cow position: chrX:24577535-24577859 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 119, 48

Conread position: 173-508
Cow position: chrX:2665039-2664704 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 48

Conread position: 173-508
Cow position: chrX:3658024-3658359 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 48

Conread position: 173-508
Cow position: chrX:10444384-10444720 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 230
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 119, 48

Conread position: 173-508
Cow position: chrX:19494930-19495265 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 48

Conread position: 173-508
Cow position: chrX:23235860-23235525 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 48

Conread position: 173-508
Cow position: chrX:25288649-25288984 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 48

Conread position: 173-508
Cow position: chrX:27469624-27469959 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 48

Conread position: 173-508
Cow position: chrX:28555405-28555740 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 48

Conread position: 173-508
Cow position: chrX:32038813-32039148 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 48

Conread position: 173-508
Cow position: chrX:36820202-36820537 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 48

Conread position: 173-516
Cow position: chrX:36249835-36250175 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 47

Conread position: 174-445
Cow position: chrX:47232857-47232595 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 116, 88

Conread position: 174-455
Cow position: chrX:23497642-23497915 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 175-369
Cow position: chrX:9770652-9770850 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 17

Conread position: 178-428
Cow position: chrX:4750282-4750523 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 0

Conread position: 178-509
Cow position: chrX:14925022-14924694 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 31

Conread position: 181-360
Cow position: chrX:34408196-34408018 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 111, 40

Conread position: 182-352
Cow position: chrX:4951795-4951620 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 182-352
Cow position: chrX:21929353-21929182 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 182-379
Cow position: chrX:23340952-23341143 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 110, 25

Conread position: 182-379
Cow position: chrX:26134540-26134344 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 39

Conread position: 182-380
Cow position: chrX:14019172-14018975 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 137
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 28, 40

Conread position: 182-431
Cow position: chrX:42849762-42849512 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 110, 22

Conread position: 182-437
Cow position: chrX:46045062-46044810 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 110, 39

Conread position: 182-465
Cow position: chrX:2933740-2933460 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 110, 27

Conread position: 182-480
Cow position: chrX:38102426-38102721 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 39, 0

Conread position: 182-496
Cow position: chrX:14819735-14819419 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 40

Conread position: 182-499
Cow position: chrX:43984194-43983874 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 111, 25

Conread position: 182-508
Cow position: chrX:2160786-2160460 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 219
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 110, 39

Conread position: 182-508
Cow position: chrX:2274938-2274612 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 221
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 110, 39

Conread position: 182-508
Cow position: chrX:6558871-6558545 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 214, 39

Conread position: 182-508
Cow position: chrX:19109020-19109346 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 224
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 110, 39

Conread position: 182-508
Cow position: chrX:23386527-23386844 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 225
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 36

Conread position: 182-508
Cow position: chrX:29780762-29780440 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 219
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 60, 27

Conread position: 182-508
Cow position: chrX:34333179-34333505 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 39

Conread position: 182-514
Cow position: chrX:48489869-48490195 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 225
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 110, 39

Conread position: 182-516
Cow position: chrX:1946695-1947034 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 39

Conread position: 182-516
Cow position: chrX:6655247-6655580 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 28

Conread position: 182-516
Cow position: chrX:15589854-15590185 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 39

Conread position: 182-516
Cow position: chrX:20583039-20582717 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 59

Conread position: 182-516
Cow position: chrX:30198971-30199305 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 226
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 110, 39

Conread position: 182-516
Cow position: chrX:42779105-42779439 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 110, 33

Conread position: 183-403
Cow position: chrX:8991901-8991688 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 109, 21

Conread position: 183-432
Cow position: chrX:13265607-13265849 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 18, 8

Conread position: 183-437
Cow position: chrX:1104784-1105038 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 109, 34

Conread position: 183-441
Cow position: chrX:776768-777032 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 109, 34

Conread position: 183-515
Cow position: chrX:24280961-24280623 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 233
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 109, 38

Conread position: 183-516
Cow position: chrX:30141298-30141638 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 230
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 148, 27

Conread position: 183-516
Cow position: chrX:35409676-35409355 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 8

Conread position: 184-515
Cow position: chrX:11562171-11561831 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 43, 14

Conread position: 184-516
Cow position: chrX:24318078-24317753 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 20

Conread position: 186-507
Cow position: chrX:5046884-5047201 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 236
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 76, 18

Conread position: 186-516
Cow position: chrX:25452558-25452237 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 225
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 21, 0

Conread position: 188-390
Cow position: chrX:31256878-31256681 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 132, 0

Conread position: 188-426
Cow position: chrX:30484189-30484428 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 11

Conread position: 189-516
Cow position: chrX:30823528-30823203 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 226
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 103, 28

Conread position: 190-428
Cow position: chrX:46315369-46315604 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 0

Conread position: 191-440
Cow position: chrX:6694419-6694667 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 5, 171

Conread position: 191-502
Cow position: chrX:1978522-1978197 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 69

Conread position: 191-504
Cow position: chrX:1331947-1331631 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 13

Conread position: 191-516
Cow position: chrX:5809203-5808894 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 217
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 101, 18

Conread position: 192-378
Cow position: chrX:48669073-48669258 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 103, 29

Conread position: 192-513
Cow position: chrX:45973662-45973990 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 220
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 44, 15

Conread position: 192-516
Cow position: chrX:25458623-25458950 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 23

Conread position: 193-367
Cow position: chrX:18515410-18515237 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 99, 28

Conread position: 193-377
Cow position: chrX:6586301-6586118 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 127
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 99, 28

Conread position: 193-379
Cow position: chrX:15575547-15575360 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 193-379
Cow position: chrX:22866565-22866756 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 193-402
Cow position: chrX:4091656-4091449 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 19, 140

Conread position: 193-423
Cow position: chrX:281130-280914 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 74, 38

Conread position: 193-423
Cow position: chrX:8501007-8501238 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 156
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 50, 28

Conread position: 193-438
Cow position: chrX:27514874-27514633 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 97, 16

Conread position: 193-442
Cow position: chrX:22524518-22524768 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 165
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 28

Conread position: 193-448
Cow position: chrX:9572533-9572278 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 28

Conread position: 193-448
Cow position: chrX:9976446-9976191 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 28

Conread position: 193-453
Cow position: chrX:11498615-11498875 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 99, 28

Conread position: 193-466
Cow position: chrX:27704243-27704516 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 99, 28

Conread position: 193-470
Cow position: chrX:20579741-20580019 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 99, 28

Conread position: 193-480
Cow position: chrX:27751230-27751512 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 126, 28

Conread position: 193-483
Cow position: chrX:20353056-20353347 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 193
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 99, 28

Conread position: 193-489
Cow position: chrX:16807746-16808042 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 200
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 99, 36

Conread position: 193-490
Cow position: chrX:29066444-29066154 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 99, 24

Conread position: 193-507
Cow position: chrX:42591737-42591421 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 216
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 99, 0

Conread position: 193-508
Cow position: chrX:3653767-3653458 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 78

Conread position: 193-508
Cow position: chrX:7755911-7755596 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 28

Conread position: 193-508
Cow position: chrX:23396608-23396301 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 213
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 99, 28

Conread position: 193-508
Cow position: chrX:26759559-26759874 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 99, 7

Conread position: 193-508
Cow position: chrX:27422272-27422586 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 99, 28

Conread position: 193-508
Cow position: chrX:31605694-31605379 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 28

Conread position: 193-508
Cow position: chrX:47318414-47318101 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 213
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 99, 22

Conread position: 193-508
Cow position: chrX:47608424-47608109 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 219
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 99, 24

Conread position: 193-509
Cow position: chrX:670999-671315 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 28

Conread position: 193-509
Cow position: chrX:28514081-28513766 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 217
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 99, 28

Conread position: 193-509
Cow position: chrX:30531018-30531338 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 217
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 99, 28

Conread position: 193-509
Cow position: chrX:39291751-39292049 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 99, 28

Conread position: 193-513
Cow position: chrX:29169324-29169644 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 28

Conread position: 193-513
Cow position: chrX:29841161-29841479 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 99, 22

Conread position: 193-514
Cow position: chrX:23571787-23572111 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 193-514
Cow position: chrX:39704704-39704394 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 99, 29

Conread position: 193-516
Cow position: chrX:3361828-3361506 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 213
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 99, 28

Conread position: 193-516
Cow position: chrX:3648808-3649121 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 99, 29

Conread position: 193-516
Cow position: chrX:8782754-8782431 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 28

Conread position: 193-516
Cow position: chrX:10916056-10915725 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 226
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 99, 28

Conread position: 193-516
Cow position: chrX:11725253-11725580 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 225
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 99, 28

Conread position: 193-516
Cow position: chrX:11975485-11975800 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 227
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 99, 28

Conread position: 193-516
Cow position: chrX:14846064-14846387 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 28

Conread position: 193-516
Cow position: chrX:16279659-16279336 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 222
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 99, 28

Conread position: 193-516
Cow position: chrX:16466311-16465987 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 221
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 99, 28

Conread position: 193-516
Cow position: chrX:17783509-17783186 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 225
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 99, 28

Conread position: 193-516
Cow position: chrX:18655795-18656118 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 220
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 99, 28

Conread position: 193-516
Cow position: chrX:18949733-18950058 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 30, 14

Conread position: 193-516
Cow position: chrX:23281015-23280693 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 99, 128

Conread position: 193-516
Cow position: chrX:27096123-27095806 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 46

Conread position: 193-516
Cow position: chrX:27761352-27761027 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 223
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 99, 28

Conread position: 193-516
Cow position: chrX:27997656-27997337 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 99, 28

Conread position: 193-516
Cow position: chrX:28558825-28559148 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 210
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 99, 28

Conread position: 193-516
Cow position: chrX:31202850-31202527 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 99, 28

Conread position: 193-516
Cow position: chrX:31449613-31449935 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 222
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 99, 28

Conread position: 193-516
Cow position: chrX:35612535-35612857 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 99, 28

Conread position: 193-516
Cow position: chrX:39559642-39559965 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 26

Conread position: 193-516
Cow position: chrX:39714559-39714236 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 222
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 99, 28

Conread position: 193-516
Cow position: chrX:42086862-42086549 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 193-516
Cow position: chrX:43101535-43101214 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 99, 28

Conread position: 193-516
Cow position: chrX:44096562-44096240 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 212
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 213, 29

Conread position: 193-516
Cow position: chrX:45237476-45237153 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 99, 28

Conread position: 193-516
Cow position: chrX:45263059-45263381 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 99, 28

Conread position: 193-516
Cow position: chrX:45787138-45786817 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 222
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 99, 90

Conread position: 193-516
Cow position: chrX:45904188-45903865 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 28

Conread position: 193-516
Cow position: chrX:45933014-45932691 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 218
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 99, 28

Conread position: 193-516
Cow position: chrX:48204911-48205226 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 227
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 165, 14

Conread position: 194-349
Cow position: chrX:21844833-21844679 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 98, 13

Conread position: 194-396
Cow position: chrX:18216291-18216084 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 14

Conread position: 194-423
Cow position: chrX:16689500-16689272 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 7

Conread position: 194-431
Cow position: chrX:27994247-27994485 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 159
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 77, 27

Conread position: 194-455
Cow position: chrX:42588662-42588924 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 146

Conread position: 194-498
Cow position: chrX:22537937-22538249 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 130

Conread position: 194-498
Cow position: chrX:23451162-23451466 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 98, 23

Conread position: 194-508
Cow position: chrX:15008425-15008737 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 27

Conread position: 194-508
Cow position: chrX:23047787-23047475 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 216
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 98, 27

Conread position: 194-508
Cow position: chrX:24509876-24509562 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 27

Conread position: 194-514
Cow position: chrX:30228106-30228421 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 23

Conread position: 194-515
Cow position: chrX:45399485-45399810 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 47, 6

Conread position: 194-516
Cow position: chrX:5376377-5376056 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 99, 23

Conread position: 194-516
Cow position: chrX:7550789-7551108 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 220
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 98, 8

Conread position: 194-516
Cow position: chrX:9096672-9096354 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 23

Conread position: 194-516
Cow position: chrX:11949494-11949806 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 98, 8

Conread position: 194-516
Cow position: chrX:18077903-18078223 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 23

Conread position: 194-516
Cow position: chrX:20877756-20878076 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 23

Conread position: 194-516
Cow position: chrX:30143278-30143597 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 23

Conread position: 194-516
Cow position: chrX:37133527-37133847 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 98, 23

Conread position: 195-445
Cow position: chrX:28580232-28579979 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 72, 0

Conread position: 195-499
Cow position: chrX:21598670-21598382 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 97, 22

Conread position: 195-499
Cow position: chrX:46606503-46606806 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 203

Conread position: 195-502
Cow position: chrX:14909020-14908717 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 14, 0

Conread position: 195-508
Cow position: chrX:14463321-14463008 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 207
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 97, 26

Conread position: 195-508
Cow position: chrX:30021090-30021403 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 216
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 97, 26

Conread position: 195-515
Cow position: chrX:36840874-36840555 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 8

Conread position: 195-516
Cow position: chrX:323905-323602 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 210
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 195-516
Cow position: chrX:9226973-9227297 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 33

Conread position: 195-516
Cow position: chrX:21749458-21749771 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 216
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 28, 135

Conread position: 195-516
Cow position: chrX:22078335-22078014 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 223
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 97, 20

Conread position: 195-516
Cow position: chrX:29848631-29848944 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 225
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 97, 22

Conread position: 195-516
Cow position: chrX:44980029-44980350 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 222
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 70, 27

Conread position: 196-515
Cow position: chrX:33827013-33827344 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 222
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 73, 0

Conread position: 196-516
Cow position: chrX:5127905-5127610 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 223
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 8, 0

Conread position: 197-437
Cow position: chrX:7513513-7513282 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 197-509
Cow position: chrX:24414036-24413724 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 209
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 24

Conread position: 198-436
Cow position: chrX:19841657-19841891 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 94, 38

Conread position: 198-439
Cow position: chrX:13405311-13405552 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 23

Conread position: 198-508
Cow position: chrX:10351866-10351556 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 216
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 94, 23

Conread position: 198-516
Cow position: chrX:32747686-32747345 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 198-516
Cow position: chrX:45674850-45674533 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 201
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 59

Conread position: 199-369
Cow position: chrX:14003640-14003810 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 9

Conread position: 199-386
Cow position: chrX:45759395-45759215 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 129

Conread position: 199-478
Cow position: chrX:2964056-2963775 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 14, 79

Conread position: 199-516
Cow position: chrX:2499336-2499653 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 215
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 14, 129

Conread position: 199-516
Cow position: chrX:5353300-5353616 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 93, 17

Conread position: 199-516
Cow position: chrX:12466503-12466182 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 220
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 11, 139

Conread position: 199-516
Cow position: chrX:15119887-15120202 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 93, 10

Conread position: 199-516
Cow position: chrX:24587442-24587767 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 199-516
Cow position: chrX:38051427-38051745 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 157

Conread position: 200-393
Cow position: chrX:1505709-1505523 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 89, 39

Conread position: 200-435
Cow position: chrX:42338946-42339168 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 209, 38

Conread position: 200-445
Cow position: chrX:2648353-2648592 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 119, 0

Conread position: 200-488
Cow position: chrX:42589759-42590043 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 213, 38

Conread position: 200-509
Cow position: chrX:3405361-3405661 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 93, 112

Conread position: 200-515
Cow position: chrX:36693236-36692923 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 88, 63

Conread position: 201-480
Cow position: chrX:28602910-28603191 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 12, 217

Conread position: 202-437
Cow position: chrX:2029389-2029156 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 60, 15

Conread position: 202-437
Cow position: chrX:40540144-40540376 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 85, 7

Conread position: 202-444
Cow position: chrX:19019107-19019351 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 188
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 21, 112

Conread position: 202-508
Cow position: chrX:7742455-7742762 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 207
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 90, 20

Conread position: 202-516
Cow position: chrX:11806015-11806329 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 289

Conread position: 202-516
Cow position: chrX:41403978-41403648 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 202-516
Cow position: chrX:41410526-41410196 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 203-437
Cow position: chrX:2383486-2383255 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 118, 128

Conread position: 203-437
Cow position: chrX:8681930-8682164 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 79, 66

Conread position: 203-509
Cow position: chrX:48246853-48247139 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 221
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 237, 59

Conread position: 203-515
Cow position: chrX:160035-160344 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 128

Conread position: 203-515
Cow position: chrX:3395770-3396081 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 220
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 92, 51

Conread position: 203-515
Cow position: chrX:23024700-23024392 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 6

Conread position: 204-415
Cow position: chrX:8039819-8039598 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 73

Conread position: 204-435
Cow position: chrX:45566631-45566398 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 90, 15

Conread position: 204-439
Cow position: chrX:8517863-8517640 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 205, 11

Conread position: 204-439
Cow position: chrX:10373312-10373071 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 14, 55

Conread position: 204-445
Cow position: chrX:1728432-1728659 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 204-503
Cow position: chrX:43218396-43218092 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 67, 6

Conread position: 204-504
Cow position: chrX:27020182-27019902 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 204-507
Cow position: chrX:38667621-38667938 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 13, 83

Conread position: 204-509
Cow position: chrX:19023439-19023121 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 64, 13

Conread position: 204-515
Cow position: chrX:16714198-16713885 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 15, 77

Conread position: 204-515
Cow position: chrX:25945833-25946146 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 250

Conread position: 204-516
Cow position: chrX:11982133-11981808 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 69, 88

Conread position: 204-516
Cow position: chrX:21665597-21665904 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 20

Conread position: 205-428
Cow position: chrX:29509445-29509669 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 177
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 10, 129

Conread position: 205-441
Cow position: chrX:35284615-35284379 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 88, 125

Conread position: 205-515
Cow position: chrX:2786563-2786858 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 233, 62

Conread position: 205-515
Cow position: chrX:25281482-25281797 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 226
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 206, 53

Conread position: 206-443
Cow position: chrX:42282422-42282190 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 207, 77

Conread position: 206-445
Cow position: chrX:25571002-25571237 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 62

Conread position: 206-494
Cow position: chrX:35042219-35041931 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 249

Conread position: 206-502
Cow position: chrX:25419163-25419459 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 241

Conread position: 206-509
Cow position: chrX:43647753-43648050 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 213
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 203, 62

Conread position: 207-348
Cow position: chrX:10366233-10366374 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 207-379
Cow position: chrX:40321860-40321686 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 207-412
Cow position: chrX:47454123-47453918 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 86, 110

Conread position: 207-437
Cow position: chrX:7425461-7425230 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 71, 10

Conread position: 208-368
Cow position: chrX:23254214-23254378 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 208-430
Cow position: chrX:13245587-13245364 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 161

Conread position: 208-441
Cow position: chrX:8558470-8558701 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 203, 46

Conread position: 208-515
Cow position: chrX:35387910-35388219 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 0

Conread position: 208-516
Cow position: chrX:48287457-48287753 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 113

Conread position: 209-516
Cow position: chrX:12116037-12115728 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 140

Conread position: 209-516
Cow position: chrX:42587437-42587742 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 215
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 204, 79

Conread position: 211-508
Cow position: chrX:17980589-17980290 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 179
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 81, 0

Conread position: 212-515
Cow position: chrX:25848901-25848603 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 46

Conread position: 215-430
Cow position: chrX:48684239-48684450 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 118

Conread position: 216-509
Cow position: chrX:45199911-45200194 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 192
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 261, 106

Conread position: 217-412
Cow position: chrX:44063737-44063925 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 73, 39

Conread position: 217-506
Cow position: chrX:33020467-33020183 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 217-516
Cow position: chrX:39555854-39556129 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 222
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 197, 41

Conread position: 219-513
Cow position: chrX:4869529-4869233 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 219-516
Cow position: chrX:24201168-24200885 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 48, 111

Conread position: 220-431
Cow position: chrX:25411821-25411612 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 65, 83

Conread position: 220-468
Cow position: chrX:17744045-17743798 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 45, 11

Conread position: 220-516
Cow position: chrX:38967628-38967338 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 95

Conread position: 222-427
Cow position: chrX:34385312-34385105 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 222-440
Cow position: chrX:28856952-28856740 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 38, 64

Conread position: 222-449
Cow position: chrX:47042010-47042237 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 70, 18

Conread position: 222-508
Cow position: chrX:18025022-18024734 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 70, 0

Conread position: 222-508
Cow position: chrX:23987227-23986940 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 70, 257

Conread position: 222-508
Cow position: chrX:32331612-32331326 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 40, 201

Conread position: 222-516
Cow position: chrX:2104384-2104092 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 70, 125

Conread position: 222-516
Cow position: chrX:2478645-2478940 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 211

Conread position: 222-516
Cow position: chrX:3464095-3464389 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 70, 149

Conread position: 222-516
Cow position: chrX:4905008-4905302 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 89

Conread position: 222-516
Cow position: chrX:6373164-6372868 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 204
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 7, 113

Conread position: 222-516
Cow position: chrX:14163174-14162878 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 70, 0

Conread position: 222-516
Cow position: chrX:23216090-23215794 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 222-516
Cow position: chrX:25575942-25575649 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 70, 109

Conread position: 222-516
Cow position: chrX:25741131-25741427 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 71, 0

Conread position: 222-516
Cow position: chrX:26531941-26531645 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 222-516
Cow position: chrX:31977863-31978157 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 70, 259

Conread position: 223-508
Cow position: chrX:11460889-11461177 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 190
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 178

Conread position: 223-508
Cow position: chrX:32583831-32584118 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 223-515
Cow position: chrX:16706784-16706487 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 69, 0

Conread position: 223-516
Cow position: chrX:21785745-21785455 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 69, 119

Conread position: 224-437
Cow position: chrX:4942780-4942985 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 190, 21

Conread position: 225-442
Cow position: chrX:33632143-33631937 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 179, 33

Conread position: 226-435
Cow position: chrX:866297-866089 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 142
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 66, 129

Conread position: 226-514
Cow position: chrX:30454643-30454933 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 66, 0

Conread position: 226-516
Cow position: chrX:4404511-4404222 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 66, 55

Conread position: 226-516
Cow position: chrX:24441268-24441560 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 66, 0

Conread position: 226-516
Cow position: chrX:32094471-32094763 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 227-369
Cow position: chrX:41271235-41271373 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 67, 5

Conread position: 227-412
Cow position: chrX:46429887-46430066 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 147
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 13, 0

Conread position: 227-431
Cow position: chrX:4482941-4482734 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 110

Conread position: 227-445
Cow position: chrX:16541698-16541917 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 63, 177

Conread position: 227-516
Cow position: chrX:44731571-44731287 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 218

Conread position: 228-508
Cow position: chrX:30950505-30950223 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 167
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 64, 0

Conread position: 229-508
Cow position: chrX:15345993-15346274 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 63, 0

Conread position: 233-508
Cow position: chrX:18223384-18223108 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 59, 228

Conread position: 233-514
Cow position: chrX:47989729-47989449 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 184
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 56

Conread position: 236-516
Cow position: chrX:4123802-4123522 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 98

Conread position: 238-516
Cow position: chrX:11581907-11581622 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 82

Conread position: 240-516
Cow position: chrX:35937120-35937382 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 174, 48

Conread position: 241-437
Cow position: chrX:2206591-2206778 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 156
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 52, 65

Conread position: 242-437
Cow position: chrX:46984533-46984736 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 54, 80

Conread position: 243-402
Cow position: chrX:43973522-43973360 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 15, 46

Conread position: 243-437
Cow position: chrX:31745084-31745281 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 15, 55

Conread position: 243-442
Cow position: chrX:6640087-6639885 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 50, 99

Conread position: 243-515
Cow position: chrX:20653358-20653081 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 14, 46

Conread position: 244-516
Cow position: chrX:126746-126478 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 34

Conread position: 246-393
Cow position: chrX:24149595-24149450 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 246-412
Cow position: chrX:16324010-16324172 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 47, 77

Conread position: 246-488
Cow position: chrX:48227654-48227900 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 20, 101

Conread position: 246-496
Cow position: chrX:25238128-25237885 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 24

Conread position: 248-509
Cow position: chrX:23061398-23061148 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 248-514
Cow position: chrX:42585119-42585376 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 164, 82

Conread position: 248-516
Cow position: chrX:26883182-26883462 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 161, 19

Conread position: 249-515
Cow position: chrX:20976124-20976372 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 43, 14

Conread position: 250-403
Cow position: chrX:905305-905147 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 250-437
Cow position: chrX:47243327-47243513 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 100, 35

Conread position: 250-508
Cow position: chrX:5112602-5112861 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 42, 14

Conread position: 250-515
Cow position: chrX:6012154-6012419 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 167, 31

Conread position: 250-515
Cow position: chrX:16354398-16354660 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 177
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 171, 10

Conread position: 252-515
Cow position: chrX:13058533-13058252 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 16

Conread position: 252-516
Cow position: chrX:7806330-7806065 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 130

Conread position: 252-516
Cow position: chrX:32978309-32978570 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 19

Conread position: 253-437
Cow position: chrX:42499077-42499263 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 14, 80

Conread position: 253-486
Cow position: chrX:45694053-45693823 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 161, 35

Conread position: 254-445
Cow position: chrX:37067284-37067089 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 155, 8

Conread position: 254-504
Cow position: chrX:47170791-47170539 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 254-516
Cow position: chrX:1550901-1550637 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 254-516
Cow position: chrX:12179912-12179655 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 77

Conread position: 254-516
Cow position: chrX:22578213-22578473 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 180
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 39, 201

Conread position: 254-516
Cow position: chrX:24482422-24482684 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 93

Conread position: 254-516
Cow position: chrX:28517774-28518036 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 238

Conread position: 254-516
Cow position: chrX:38151640-38151375 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 254-516
Cow position: chrX:42855361-42855098 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 205

Conread position: 255-411
Cow position: chrX:46672659-46672814 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 84

Conread position: 255-412
Cow position: chrX:25036750-25036908 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 70

Conread position: 256-409
Cow position: chrX:29770229-29770384 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 256-508
Cow position: chrX:19674596-19674343 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 36, 10

Conread position: 256-509
Cow position: chrX:24125124-24125377 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 36, 12

Conread position: 256-516
Cow position: chrX:10437715-10437964 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 199
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 37, 85

Conread position: 256-516
Cow position: chrX:44087254-44086991 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 183
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 34, 156

Conread position: 256-516
Cow position: chrX:48371044-48370783 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 63

Conread position: 257-432
Cow position: chrX:18812196-18812029 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 21

Conread position: 257-502
Cow position: chrX:15090819-15091066 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 257-508
Cow position: chrX:40121071-40121320 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 35, 98

Conread position: 257-508
Cow position: chrX:44908261-44908011 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 152, 31

Conread position: 257-516
Cow position: chrX:2931771-2932033 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 257-516
Cow position: chrX:9012275-9012014 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 173
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 257-516
Cow position: chrX:27590092-27590346 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 35, 195

Conread position: 258-435
Cow position: chrX:877084-877255 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 36, 53

Conread position: 259-516
Cow position: chrX:36778353-36778092 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 260-484
Cow position: chrX:31556554-31556779 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 32, 9

Conread position: 260-516
Cow position: chrX:29915281-29915538 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 32, 122

Conread position: 261-515
Cow position: chrX:39699263-39699014 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 52, 24

Conread position: 262-516
Cow position: chrX:16529948-16529692 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 30, 0

Conread position: 262-516
Cow position: chrX:30179985-30180239 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 30, 49

Conread position: 265-456
Cow position: chrX:48536727-48536919 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 149, 133

Conread position: 268-466
Cow position: chrX:46746627-46746427 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 136
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 268-485
Cow position: chrX:29907293-29907511 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 24, 192

Conread position: 268-508
Cow position: chrX:22567469-22567227 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 24, 0

Conread position: 268-515
Cow position: chrX:13686658-13686405 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 24, 171

Conread position: 268-516
Cow position: chrX:22811822-22811573 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 24, 0

Conread position: 268-516
Cow position: chrX:28646050-28646298 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 90

Conread position: 269-516
Cow position: chrX:29864493-29864744 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 23, 0

Conread position: 270-502
Cow position: chrX:48224254-48224485 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 22, 52

Conread position: 270-508
Cow position: chrX:6652137-6652377 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 22, 0

Conread position: 270-508
Cow position: chrX:15560879-15561120 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 120

Conread position: 271-508
Cow position: chrX:30966034-30965796 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 21, 5

Conread position: 272-508
Cow position: chrX:18293858-18293631 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 55, 0

Conread position: 272-512
Cow position: chrX:45043493-45043249 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 21, 0

Conread position: 274-516
Cow position: chrX:21344325-21344081 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 117

Conread position: 274-516
Cow position: chrX:24173237-24173481 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 14, 188

Conread position: 274-516
Cow position: chrX:29760630-29760386 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 18, 0

Conread position: 276-508
Cow position: chrX:9154289-9154055 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 16, 0

Conread position: 276-509
Cow position: chrX:21795420-21795190 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 53

Conread position: 276-515
Cow position: chrX:16229048-16229288 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 137, 32

Conread position: 276-515
Cow position: chrX:45466166-45465922 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 145, 37

Conread position: 277-435
Cow position: chrX:10107050-10107207 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 135, 76

Conread position: 277-456
Cow position: chrX:46989867-46990040 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 134, 39

Conread position: 277-465
Cow position: chrX:31473450-31473260 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 133, 0

Conread position: 277-494
Cow position: chrX:48676000-48675785 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 137, 50

Conread position: 277-496
Cow position: chrX:6607346-6607116 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 159, 132

Conread position: 277-499
Cow position: chrX:37299523-37299300 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 138

Conread position: 277-515
Cow position: chrX:3161090-3161328 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 54

Conread position: 277-515
Cow position: chrX:43788933-43789165 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 159
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 131, 8

Conread position: 278-515
Cow position: chrX:39187438-39187679 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 158
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 8

Conread position: 278-516
Cow position: chrX:10916671-10916441 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 185
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 136, 52

Conread position: 278-516
Cow position: chrX:33205072-33205305 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 43

Conread position: 279-508
Cow position: chrX:5893154-5892923 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 13, 0

Conread position: 279-508
Cow position: chrX:29877255-29877486 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 0

Conread position: 279-516
Cow position: chrX:9347064-9346832 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 131, 7

Conread position: 279-516
Cow position: chrX:30138859-30139097 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 280-442
Cow position: chrX:13360456-13360293 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 133, 0

Conread position: 281-495
Cow position: chrX:5507596-5507384 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 127, 5

Conread position: 281-508
Cow position: chrX:31839431-31839204 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 148
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 134, 5

Conread position: 281-515
Cow position: chrX:39288247-39288480 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 103, 5

Conread position: 281-516
Cow position: chrX:11904403-11904638 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 155
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 133, 5

Conread position: 283-508
Cow position: chrX:11566836-11566609 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 283-508
Cow position: chrX:23452676-23452903 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 9, 0

Conread position: 283-508
Cow position: chrX:24467204-24467430 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 9, 56

Conread position: 283-508
Cow position: chrX:24809049-24809275 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 9, 97

Conread position: 283-515
Cow position: chrX:1655397-1655168 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 156
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 57

Conread position: 284-508
Cow position: chrX:30863278-30863504 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 8, 0

Conread position: 284-516
Cow position: chrX:2523809-2524043 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 284-516
Cow position: chrX:29049880-29049662 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 285-433
Cow position: chrX:6643172-6643030 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 285-437
Cow position: chrX:9538477-9538324 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 285-440
Cow position: chrX:9838057-9837901 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 124, 0

Conread position: 285-492
Cow position: chrX:40734006-40734204 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 7, 23

Conread position: 285-496
Cow position: chrX:24194023-24193816 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 119, 42

Conread position: 285-507
Cow position: chrX:21255956-21255733 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 7, 113

Conread position: 285-515
Cow position: chrX:26619446-26619673 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 286-472
Cow position: chrX:16846974-16847158 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 74

Conread position: 286-503
Cow position: chrX:12102131-12102348 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 286-504
Cow position: chrX:9404033-9403810 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 123, 8

Conread position: 286-509
Cow position: chrX:10415613-10415832 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 129, 34

Conread position: 286-510
Cow position: chrX:4325575-4325804 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 286-513
Cow position: chrX:29010649-29010423 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 122, 18

Conread position: 286-514
Cow position: chrX:21217676-21217901 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 118, 0

Conread position: 286-515
Cow position: chrX:7809084-7809315 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 127, 191

Conread position: 286-515
Cow position: chrX:12110737-12110965 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 154
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 123, 203

Conread position: 286-515
Cow position: chrX:12852592-12852821 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 286-515
Cow position: chrX:19636824-19636598 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 210, 36

Conread position: 286-515
Cow position: chrX:23081207-23080981 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 47

Conread position: 286-515
Cow position: chrX:23192459-23192686 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 102

Conread position: 286-515
Cow position: chrX:23218993-23218766 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 9, 48

Conread position: 286-515
Cow position: chrX:37148448-37148223 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 286-516
Cow position: chrX:26878583-26878354 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 24, 29

Conread position: 286-516
Cow position: chrX:41050033-41049800 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 128, 0

Conread position: 287-508
Cow position: chrX:5408972-5408750 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 128, 0

Conread position: 287-516
Cow position: chrX:34435134-34435362 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 288-417
Cow position: chrX:25163731-25163604 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 124, 50

Conread position: 288-435
Cow position: chrX:46372829-46372975 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 288-437
Cow position: chrX:19210480-19210630 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 126, 0

Conread position: 288-438
Cow position: chrX:6514371-6514522 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 126, 0

Conread position: 288-439
Cow position: chrX:8492842-8492994 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 122, 0

Conread position: 288-442
Cow position: chrX:30729488-30729645 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 288-442
Cow position: chrX:36154660-36154811 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 40

Conread position: 288-445
Cow position: chrX:31338892-31338734 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 288-452
Cow position: chrX:45787563-45787405 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 126, 30

Conread position: 288-460
Cow position: chrX:42500403-42500237 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 288-475
Cow position: chrX:12865926-12865740 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 288-475
Cow position: chrX:13429370-13429550 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 288-479
Cow position: chrX:16531909-16531723 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 154
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 49, 0

Conread position: 288-480
Cow position: chrX:29925668-29925853 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 288-480
Cow position: chrX:48211064-48211258 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 96, 161

Conread position: 288-487
Cow position: chrX:37761894-37761707 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 288-496
Cow position: chrX:37377350-37377560 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 185

Conread position: 288-501
Cow position: chrX:20562104-20561898 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 145
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 288-502
Cow position: chrX:4484057-4483845 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 82, 39

Conread position: 288-502
Cow position: chrX:40142285-40142493 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 90, 0

Conread position: 288-504
Cow position: chrX:24735854-24735637 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 121, 0

Conread position: 288-504
Cow position: chrX:48160570-48160777 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 90, 42

Conread position: 288-507
Cow position: chrX:2465364-2465585 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 104, 197

Conread position: 288-508
Cow position: chrX:6659291-6659071 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 23, 88

Conread position: 288-508
Cow position: chrX:7118728-7118949 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 127, 0

Conread position: 288-509
Cow position: chrX:25617996-25618224 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 124, 0

Conread position: 288-509
Cow position: chrX:39346870-39347092 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 88, 0

Conread position: 288-509
Cow position: chrX:40515806-40515597 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 288-512
Cow position: chrX:38794641-38794416 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 124, 41

Conread position: 288-513
Cow position: chrX:7341729-7341498 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 155
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 76, 44

Conread position: 288-513
Cow position: chrX:30919476-30919704 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 122, 0

Conread position: 288-514
Cow position: chrX:5675788-5676009 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 288-515
Cow position: chrX:5856603-5856824 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 152
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 288-515
Cow position: chrX:8661674-8661449 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 119, 0

Conread position: 288-515
Cow position: chrX:9970834-9970618 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 122, 132

Conread position: 288-515
Cow position: chrX:13068825-13069050 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 126, 99

Conread position: 288-515
Cow position: chrX:13089376-13089611 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 109

Conread position: 288-515
Cow position: chrX:14261910-14262143 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 126, 0

Conread position: 288-515
Cow position: chrX:18989884-18990112 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 153, 0

Conread position: 288-515
Cow position: chrX:22329658-22329882 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 124, 9

Conread position: 288-515
Cow position: chrX:22873314-22873085 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 124, 0

Conread position: 288-515
Cow position: chrX:23696497-23696724 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 116, 41

Conread position: 288-515
Cow position: chrX:24169398-24169627 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 50, 185

Conread position: 288-515
Cow position: chrX:25205634-25205398 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 126, 0

Conread position: 288-515
Cow position: chrX:25301839-25302064 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 85, 42

Conread position: 288-515
Cow position: chrX:25329928-25329701 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 30, 43

Conread position: 288-515
Cow position: chrX:27322956-27323168 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 288-515
Cow position: chrX:34009662-34009438 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 124, 49

Conread position: 288-515
Cow position: chrX:35632840-35633065 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 88, 41

Conread position: 288-515
Cow position: chrX:40581903-40581680 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 126, 9

Conread position: 288-515
Cow position: chrX:46447916-46448140 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 121, 42

Conread position: 288-516
Cow position: chrX:7382235-7382011 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 42

Conread position: 288-516
Cow position: chrX:25283238-25283453 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 177
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 126, 42

Conread position: 288-516
Cow position: chrX:32144253-32144476 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 121, 42

Conread position: 288-516
Cow position: chrX:36534819-36535048 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 127, 0

Conread position: 288-516
Cow position: chrX:42841135-42841366 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 124, 76

Conread position: 288-516
Cow position: chrX:44852010-44851778 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 109, 225

Conread position: 289-414
Cow position: chrX:23017917-23017792 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 289-437
Cow position: chrX:4554311-4554163 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 144, 80

Conread position: 289-456
Cow position: chrX:25426287-25426120 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 118
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 144, 161

Conread position: 289-479
Cow position: chrX:33157284-33157096 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 120, 29

Conread position: 289-504
Cow position: chrX:4629774-4629992 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 108, 0

Conread position: 289-507
Cow position: chrX:24886596-24886795 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 289-509
Cow position: chrX:40364878-40365101 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 77, 70

Conread position: 289-515
Cow position: chrX:25924622-25924849 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 126, 0

Conread position: 289-515
Cow position: chrX:40105776-40105998 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 289-515
Cow position: chrX:41305718-41305941 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 152
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 79, 71

Conread position: 290-461
Cow position: chrX:30763513-30763677 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 290-515
Cow position: chrX:3207653-3207874 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 123, 24

Conread position: 291-464
Cow position: chrX:45959147-45959321 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 117, 0

Conread position: 291-509
Cow position: chrX:36365132-36364915 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 117, 153

Conread position: 291-515
Cow position: chrX:19741597-19741815 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 82, 29

Conread position: 291-515
Cow position: chrX:30163327-30163550 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 118, 74

Conread position: 291-516
Cow position: chrX:14135094-14134868 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 124, 170

Conread position: 291-516
Cow position: chrX:23316508-23316733 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 16, 167

Conread position: 291-516
Cow position: chrX:37403109-37403336 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 119, 0

Conread position: 291-516
Cow position: chrX:45467306-45467533 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 105, 0

Conread position: 292-412
Cow position: chrX:38114099-38113979 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 292-479
Cow position: chrX:12314266-12314078 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 122, 0

Conread position: 292-515
Cow position: chrX:2738184-2737970 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 35, 16

Conread position: 292-515
Cow position: chrX:33823011-33822792 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 52, 38

Conread position: 292-516
Cow position: chrX:39386354-39386578 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 121, 156

Conread position: 292-516
Cow position: chrX:44930547-44930321 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 117, 0

Conread position: 293-465
Cow position: chrX:47247005-47247171 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 121, 27

Conread position: 293-515
Cow position: chrX:21495669-21495446 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 120, 0

Conread position: 293-515
Cow position: chrX:32870876-32871098 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 89

Conread position: 293-516
Cow position: chrX:40602867-40602651 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 294-437
Cow position: chrX:15344651-15344508 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 118, 80

Conread position: 294-513
Cow position: chrX:26288777-26288993 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 26

Conread position: 295-470
Cow position: chrX:3095861-3096037 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 107, 99

Conread position: 295-509
Cow position: chrX:626136-626350 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 13

Conread position: 295-515
Cow position: chrX:45420764-45420987 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 117, 0

Conread position: 295-516
Cow position: chrX:27459165-27458942 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 114, 0

Conread position: 296-504
Cow position: chrX:22568111-22568320 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 112, 86

Conread position: 296-516
Cow position: chrX:7677877-7677655 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 146
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 298-440
Cow position: chrX:20511396-20511255 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 113, 15

Conread position: 298-499
Cow position: chrX:45976779-45976574 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 116, 52

Conread position: 298-515
Cow position: chrX:33615312-33615093 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 298-516
Cow position: chrX:19771729-19771930 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 113, 29

Conread position: 298-516
Cow position: chrX:41433521-41433733 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 113, 22

Conread position: 299-476
Cow position: chrX:5856422-5856596 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 145
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 110, 119

Conread position: 299-484
Cow position: chrX:13923323-13923146 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 114, 86

Conread position: 300-495
Cow position: chrX:16345825-16345630 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 109, 54

Conread position: 300-515
Cow position: chrX:18896516-18896728 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 114, 147

Conread position: 300-516
Cow position: chrX:508251-508469 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 109, 57

Conread position: 301-437
Cow position: chrX:33519520-33519383 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 115
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 108, 0

Conread position: 301-468
Cow position: chrX:46680022-46680190 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 118
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 301-508
Cow position: chrX:9593232-9593440 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 114, 0

Conread position: 301-513
Cow position: chrX:25738961-25738748 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 301-516
Cow position: chrX:3570349-3570138 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 108, 13

Conread position: 302-516
Cow position: chrX:4664715-4664930 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 302-516
Cow position: chrX:26753882-26754098 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 6, 0

Conread position: 303-516
Cow position: chrX:40224358-40224556 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 304-425
Cow position: chrX:29193903-29193786 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 105
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 43, 25

Conread position: 304-499
Cow position: chrX:41885895-41886091 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 111, 0

Conread position: 304-515
Cow position: chrX:23927275-23927483 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 8

Conread position: 305-512
Cow position: chrX:45410133-45410352 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 306-480
Cow position: chrX:11973744-11973568 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 306-502
Cow position: chrX:47368351-47368545 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 134
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 108, 150

Conread position: 306-515
Cow position: chrX:19437182-19437399 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 102

Conread position: 310-515
Cow position: chrX:32182133-32182342 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 98, 168

Conread position: 311-508
Cow position: chrX:6829029-6828830 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 104, 0

Conread position: 312-508
Cow position: chrX:38331272-38331077 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 103, 27

Conread position: 314-442
Cow position: chrX:919403-919530 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 108

Conread position: 314-516
Cow position: chrX:22115392-22115595 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 106

Conread position: 315-504
Cow position: chrX:26506055-26506240 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 99, 141

Conread position: 315-508
Cow position: chrX:6454584-6454390 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 100, 0

Conread position: 315-508
Cow position: chrX:10992507-10992313 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 99, 0

Conread position: 315-516
Cow position: chrX:10718398-10718197 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 315-516
Cow position: chrX:15620642-15620845 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 315-516
Cow position: chrX:24102868-24102666 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 94, 0

Conread position: 315-516
Cow position: chrX:26754743-26754942 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 94, 126

Conread position: 316-515
Cow position: chrX:15341150-15341350 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 161, 0

Conread position: 316-515
Cow position: chrX:22600529-22600728 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 317-428
Cow position: chrX:24318498-24318384 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 317-502
Cow position: chrX:48456458-48456644 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 317-516
Cow position: chrX:9898454-9898655 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 92, 0

Conread position: 318-516
Cow position: chrX:2485745-2485944 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 97, 0

Conread position: 318-516
Cow position: chrX:30060645-30060844 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 91, 0

Conread position: 320-508
Cow position: chrX:7097341-7097153 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 95, 125

Conread position: 320-508
Cow position: chrX:12811002-12810815 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 52

Conread position: 320-508
Cow position: chrX:24320392-24320577 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 95, 36

Conread position: 321-457
Cow position: chrX:5555953-5556085 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 321-502
Cow position: chrX:21861791-21861974 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 26

Conread position: 321-514
Cow position: chrX:41846651-41846845 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 87, 0

Conread position: 321-516
Cow position: chrX:15717797-15717990 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 145, 0

Conread position: 321-516
Cow position: chrX:27616717-27616525 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 90, 117

Conread position: 321-516
Cow position: chrX:27982263-27982458 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 96

Conread position: 323-515
Cow position: chrX:36677789-36677981 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 86, 146

Conread position: 325-442
Cow position: chrX:7710813-7710930 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 327-516
Cow position: chrX:616528-616716 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 154
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 14, 130

Conread position: 330-484
Cow position: chrX:25587309-25587155 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 84, 67

Conread position: 330-516
Cow position: chrX:3808282-3808093 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 85, 0

Conread position: 330-516
Cow position: chrX:12096376-12096560 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 11, 0

Conread position: 331-509
Cow position: chrX:48135009-48135186 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 119

Conread position: 334-515
Cow position: chrX:27419112-27419294 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 98

Conread position: 334-516
Cow position: chrX:29723318-29723138 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 29, 0

Conread position: 336-498
Cow position: chrX:24291814-24291977 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 336-504
Cow position: chrX:37079671-37079840 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 336-508
Cow position: chrX:26617053-26617226 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 336-508
Cow position: chrX:30052601-30052774 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 337-516
Cow position: chrX:21844504-21844321 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 338-515
Cow position: chrX:8103227-8103405 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 339-508
Cow position: chrX:22325941-22325770 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 75, 43

Conread position: 339-516
Cow position: chrX:2351927-2351749 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 74, 0

Conread position: 340-514
Cow position: chrX:30338060-30338230 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 142, 88

Conread position: 340-516
Cow position: chrX:27749147-27749322 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 74, 18

Conread position: 342-516
Cow position: chrX:17692122-17691947 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 342-516
Cow position: chrX:27135469-27135644 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 82

Conread position: 342-516
Cow position: chrX:38577394-38577220 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 67, 96

Conread position: 344-514
Cow position: chrX:32214611-32214782 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 345-492
Cow position: chrX:45956039-45955892 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 64, 97

Conread position: 351-492
Cow position: chrX:42927933-42928071 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 353-516
Cow position: chrX:43199286-43199124 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 61, 90

Conread position: 358-502
Cow position: chrX:47854537-47854678 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 56, 92

Conread position: 358-516
Cow position: chrX:24787875-24788029 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 365-515
Cow position: chrX:9044019-9044168 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 103, 0

Conread position: 366-516
Cow position: chrX:36794832-36794681 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 372-504
Cow position: chrX:47965153-47965286 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 372-515
Cow position: chrX:47655132-47654992 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 372-516
Cow position: chrX:11614553-11614408 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 119
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 372-516
Cow position: chrX:37129151-37129010 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 372-516
Cow position: chrX:42221741-42221881 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 5, 0

Conread position: 374-516
Cow position: chrX:8326088-8325947 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 378-516
Cow position: chrX:38066887-38067026 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 380-516
Cow position: chrX:22449743-22449601 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 385-516
Cow position: chrX:27117782-27117654 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 386-508
Cow position: chrX:170131-170254 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 395-516
Cow position: chrX:10256335-10256455 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 19, 67

Conread position: 398-516
Cow position: chrX:38852962-38852846 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 58

Conread position: 401-516
Cow position: chrX:42530109-42530220 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 406-508
Cow position: chrX:2715420-2715317 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 406-508
Cow position: chrX:24975735-24975632 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 406-516
Cow position: chrX:17892341-17892230 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 407-516
Cow position: chrX:11583350-11583457 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 407-516
Cow position: chrX:28542086-28542195 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 422-516
Cow position: chrX:23038216-23038310 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 79
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.