Cow genome map

Conread name: Ss1.1-Lym2-sn56_D12.f1.5

Conread position: 5-146
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 17, 53

Conread position: 5-151
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 68

Conread position: 5-155
Cow position:
Alignm length: 154
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 5-155
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 5-155
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 95

Conread position: 5-155
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 9, 38

Conread position: 5-156
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 16, 140

Conread position: 5-156
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 111

Conread position: 5-156
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 5-157
Cow position:
Alignm length: 154
Alignm identity: 119
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 16, 110

Conread position: 5-157
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 65

Conread position: 5-157
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 38

Conread position: 5-157
Cow position:
Alignm length: 155
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 12

Conread position: 5-157
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 53

Conread position: 5-157
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 61

Conread position: 5-157
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 9, 25

Conread position: 5-157
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 55

Conread position: 5-157
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 9, 135

Conread position: 5-157
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 16, 105

Conread position: 5-157
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 38

Conread position: 5-157
Cow position:
Alignm length: 154
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 5-157
Cow position:
Alignm length: 156
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 5-157
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 5-157
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 9, 38

Conread position: 5-158
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 5-158
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 108

Conread position: 5-158
Cow position:
Alignm length: 155
Alignm identity: 123
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 16, 0

Conread position: 5-159
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 42

Conread position: 5-159
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 16, 143

Conread position: 5-159
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 5-159
Cow position:
Alignm length: 157
Alignm identity: 125
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 16, 55

Conread position: 5-159
Cow position:
Alignm length: 157
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 13

Conread position: 5-159
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 16, 133

Conread position: 5-159
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 16, 141

Conread position: 5-159
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 17, 40

Conread position: 5-159
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 38

Conread position: 5-159
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 5-159
Cow position:
Alignm length: 156
Alignm identity: 124
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 5-159
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 16, 46

Conread position: 5-159
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 52

Conread position: 5-167
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 38

Conread position: 6-159
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 6-159
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 15, 48

Conread position: 8-122
Cow position:
Alignm length: 116
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 52

Conread position: 8-155
Cow position:
Alignm length: 150
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 8-155
Cow position:
Alignm length: 151
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 8-155
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 8-155
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 8-157
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 8-157
Cow position:
Alignm length: 151
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 6, 128

Conread position: 8-157
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 6, 0

Conread position: 8-158
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 8-159
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 8-159
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 73

Conread position: 8-159
Cow position:
Alignm length: 154
Alignm identity: 119
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 6, 10

Conread position: 8-159
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 13, 29

Conread position: 8-159
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 6, 0

Conread position: 8-159
Cow position:
Alignm length: 153
Alignm identity: 126
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 6, 0

Conread position: 8-159
Cow position:
Alignm length: 153
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 6, 43

Conread position: 8-159
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 13, 48

Conread position: 8-159
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 13, 33

Conread position: 8-162
Cow position:
Alignm length: 157
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 8-201
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 13, 37

Conread position: 9-157
Cow position:
Alignm length: 152
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 9-158
Cow position:
Alignm length: 151
Alignm identity: 120
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 12, 82

Conread position: 10-157
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 11, 45

Conread position: 14-155
Cow position:
Alignm length: 143
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 15-157
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 20-120
Cow position:
Alignm length: 101
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-145
Cow position:
Alignm length: 126
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-145
Cow position:
Alignm length: 126
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 20-145
Cow position:
Alignm length: 126
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-150
Cow position:
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 94, 0

Conread position: 20-151
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 20-155
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 20-157
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 20-157
Cow position:
Alignm length: 138
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 20-157
Cow position:
Alignm length: 138
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 20-157
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 34

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 20-157
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 20-157
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 20-158
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 20-159
Cow position:
Alignm length: 142
Alignm identity: 114
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 14, 93

Conread position: 20-159
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 119, 26

Conread position: 20-159
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 20-159
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 20-159
Cow position:
Alignm length: 140
Alignm identity: 114
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 20-159
Cow position:
Alignm length: 140
Alignm identity: 112
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 20-159
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 20-159
Cow position:
Alignm length: 140
Alignm identity: 113
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 20-159
Cow position:
Alignm length: 141
Alignm identity: 112
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 20-159
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 20-159
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 20-164
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 21-151
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 35

Conread position: 21-157
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 21-159
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 21

Conread position: 22-149
Cow position:
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 22-157
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 32

Conread position: 22-158
Cow position:
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 22-159
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 71, 47

Conread position: 22-159
Cow position:
Alignm length: 138
Alignm identity: 115
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 22-159
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 24-157
Cow position:
Alignm length: 135
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 51

Conread position: 25-159
Cow position:
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 29-128
Cow position:
Alignm length: 100
Alignm identity: 85
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 29-157
Cow position:
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 29-159
Cow position:
Alignm length: 131
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 29-173
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 130, 66

Conread position: 30-159
Cow position:
Alignm length: 130
Alignm identity: 109
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 31-159
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 32-157
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 32-159
Cow position:
Alignm length: 128
Alignm identity: 105
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 32-159
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 34-159
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 38-157
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 38-159
Cow position:
Alignm length: 123
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 94, 106

Conread position: 40-159
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 41-157
Cow position:
Alignm length: 117
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 42-157
Cow position:
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 42-157
Cow position:
Alignm length: 116
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 42-157
Cow position:
Alignm length: 117
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 42-159
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 42-159
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 44-152
Cow position:
Alignm length: 109
Alignm identity: 90
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 44-159
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.