Cow genome map
Conread name: | Ss1.1-Lym2-sn56_D12.f1.5 |
Conread position: | 5-144 |
Cow position: | chr24:18732343-18732205 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 113 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 120, 12 |
Conread position: | 5-146 |
Cow position: | chr24:34532903-34533046 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 108 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 5-153 |
Cow position: | chr24:201855-201715 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 17, 60 |
Conread position: | 5-157 |
Cow position: | chr24:7913778-7913933 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 114 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 5-157 |
Cow position: | chr24:7917589-7917433 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 114 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 5-157 |
Cow position: | chr24:11006995-11007149 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 115 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 5-157 |
Cow position: | chr24:18485220-18485068 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 116 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 16, 57 |
Conread position: | 5-157 |
Cow position: | chr24:27039818-27039976 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 120 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 5-157 |
Cow position: | chr24:27906214-27906367 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 120 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 16, 108 |
Conread position: | 5-157 |
Cow position: | chr24:28721667-28721820 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 117 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 18, 52 |
Conread position: | 5-157 |
Cow position: | chr24:29596036-29595880 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 117 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 5-157 |
Cow position: | chr24:29781941-29782093 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 119 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 16, 20 |
Conread position: | 5-157 |
Cow position: | chr24:35794960-35794809 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 124 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 16, 125 |
Conread position: | 5-159 |
Cow position: | chr24:3430515-3430664 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 118 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 16, 20 |
Conread position: | 5-159 |
Cow position: | chr24:11876663-11876816 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 122 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 16, 44 |
Conread position: | 5-159 |
Cow position: | chr24:17363869-17363718 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 118 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 9, 61 |
Conread position: | 5-159 |
Cow position: | chr24:20024387-20024547 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 5-159 |
Cow position: | chr24:23695117-23694964 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 115 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 16, 111 |
Conread position: | 5-159 |
Cow position: | chr24:35675323-35675475 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 119 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 16, 72 |
Conread position: | 5-159 |
Cow position: | chr24:38347460-38347616 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 121 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 17, 42 |
Conread position: | 5-162 |
Cow position: | chr24:25320769-25320930 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 122 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 5-163 |
Cow position: | chr24:18734576-18734416 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 118 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 5-206 |
Cow position: | chr24:27341244-27341041 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 144 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 16, 106 |
Conread position: | 6-154 |
Cow position: | chr24:39219066-39218914 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 115 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 15, 41 |
Conread position: | 8-155 |
Cow position: | chr24:7748672-7748523 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 110 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 8-155 |
Cow position: | chr24:32360745-32360594 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 111 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 8-157 |
Cow position: | chr24:18324399-18324551 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 114 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 8-157 |
Cow position: | chr24:19658331-19658486 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 115 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 8-157 |
Cow position: | chr24:25194049-25194199 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 114 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 13, 54 |
Conread position: | 8-157 |
Cow position: | chr24:30235652-30235796 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 115 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 6, 107 |
Conread position: | 8-158 |
Cow position: | chr24:20874459-20874610 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 125 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 8-158 |
Cow position: | chr24:22079239-22079392 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 117 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 8-159 |
Cow position: | chr24:5141723-5141875 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 125 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 8-159 |
Cow position: | chr24:11886940-11887089 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 124 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 6, 96 |
Conread position: | 8-159 |
Cow position: | chr24:14279671-14279824 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 114 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 13, 141 |
Conread position: | 8-159 |
Cow position: | chr24:29540128-29539976 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 118 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 8-159 |
Cow position: | chr24:39483256-39483408 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 120 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 8-159 |
Cow position: | chr24:39833733-39833581 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 118 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 8-162 |
Cow position: | chr24:37246435-37246277 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 123 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 6, 10 |
Conread position: | 10-159 |
Cow position: | chr24:36404361-36404213 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 114 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 15-157 |
Cow position: | chr24:32758973-32758830 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 105 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 15-159 |
Cow position: | chr24:27941219-27941078 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 116 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 16-158 |
Cow position: | chr24:6132085-6131945 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 106 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 121, 0 |
Conread position: | 18-162 |
Cow position: | chr24:39143398-39143545 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 110 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 19-159 |
Cow position: | chr24:11734517-11734651 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 109 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 99, 95 |
Conread position: | 19-159 |
Cow position: | chr24:31811979-31812118 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 112 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 107, 120 |
Conread position: | 20-150 |
Cow position: | chr24:18474953-18474823 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 106 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 20-151 |
Cow position: | chr24:33724055-33723923 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 103 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 31, 73 |
Conread position: | 20-157 |
Cow position: | chr24:10125657-10125801 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 109 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 20-157 |
Cow position: | chr24:31324075-31324211 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 104 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 99, 28 |
Conread position: | 20-157 |
Cow position: | chr24:43635230-43635364 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 106 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 20-159 |
Cow position: | chr24:211777-211916 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 110 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 20-159 |
Cow position: | chr24:6487715-6487848 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 112 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 20-159 |
Cow position: | chr24:7001272-7001135 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 113 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 20-159 |
Cow position: | chr24:28062744-28062882 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 120 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 131, 0 |
Conread position: | 20-159 |
Cow position: | chr24:28990361-28990493 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 113 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 20-159 |
Cow position: | chr24:39226794-39226931 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 110 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 20-159 |
Cow position: | chr24:39842057-39841918 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 111 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 21-147 |
Cow position: | chr24:18374571-18374697 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 105 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 21-154 |
Cow position: | chr24:30314239-30314103 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 107 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 21-156 |
Cow position: | chr24:41755659-41755791 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 21-157 |
Cow position: | chr24:17955650-17955512 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 104 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 21-157 |
Cow position: | chr24:42825701-42825565 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 108 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 21-159 |
Cow position: | chr24:10499007-10499143 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 108 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 21-159 |
Cow position: | chr24:18025175-18025038 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 106 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 21-159 |
Cow position: | chr24:28496790-28496654 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 109 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 21-159 |
Cow position: | chr24:31359119-31359255 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 117 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 22-146 |
Cow position: | chr24:36486264-36486139 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 97 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 22-157 |
Cow position: | chr24:40673639-40673503 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 102 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 24-154 |
Cow position: | chr24:5754638-5754762 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 107 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 25-157 |
Cow position: | chr24:25677834-25677967 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 100 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 29-155 |
Cow position: | chr24:18695421-18695547 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 103 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 5, 34 |
Conread position: | 29-157 |
Cow position: | chr24:38375085-38375214 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 99 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 29-159 |
Cow position: | chr24:30178036-30178166 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 99 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 31-159 |
Cow position: | chr24:30897735-30897607 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 32-156 |
Cow position: | chr24:24250531-24250656 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 100 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 33-158 |
Cow position: | chr24:37650475-37650601 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 101 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 37-159 |
Cow position: | chr24:29180698-29180819 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 44-157 |
Cow position: | chr24:33222126-33222013 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 89 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 44-167 |
Cow position: | chr24:29027860-29027983 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 97 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 48-152 |
Cow position: | chr24:27465757-27465653 (view UCSC Genome Browser custom track) |
Alignm length: | 105 |
Alignm identity: | 85 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 52-159 |
Cow position: | chr24:37037723-37037828 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 91 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 58-159 |
Cow position: | chr24:18357223-18357124 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 88 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 53, 0 |
Show alignments to all cow chromosomes.