Cow genome map
| Conread name: | Ss1.1-Lym2-sn56_D12.f1.5 |
| Conread position: | 5-135 |
| Cow position: | chr5:16025631-16025500 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 5-145 |
| Cow position: | chr5:44054208-44054068 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 71 |
| Conread position: | 5-146 |
| Cow position: | chr5:9090194-9090052 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 5-147 |
| Cow position: | chr5:57576043-57576185 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-149 |
| Cow position: | chr5:37366727-37366872 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 5-150 |
| Cow position: | chr5:26377837-26377697 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 16, 30 |
| Conread position: | 5-152 |
| Cow position: | chr5:64176291-64176143 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 5-155 |
| Cow position: | chr5:7763902-7764054 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 5-155 |
| Cow position: | chr5:40039941-40039793 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 60 |
| Conread position: | 5-155 |
| Cow position: | chr5:52667857-52668008 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 5-155 |
| Cow position: | chr5:57575595-57575746 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 5-155 |
| Cow position: | chr5:58855933-58856081 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 40 |
| Conread position: | 5-156 |
| Cow position: | chr5:46510037-46509889 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 16, 52 |
| Conread position: | 5-157 |
| Cow position: | chr5:1027862-1027712 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 56 |
| Conread position: | 5-157 |
| Cow position: | chr5:4220810-4220963 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 5-157 |
| Cow position: | chr5:15426355-15426508 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 5-157 |
| Cow position: | chr5:17063264-17063111 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 5-157 |
| Cow position: | chr5:17644826-17644676 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 17, 35 |
| Conread position: | 5-157 |
| Cow position: | chr5:21617285-21617436 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 9, 36 |
| Conread position: | 5-157 |
| Cow position: | chr5:28927763-28927610 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 5-157 |
| Cow position: | chr5:30816545-30816698 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 13 |
| Conread position: | 5-157 |
| Cow position: | chr5:35235879-35235730 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 17, 50 |
| Conread position: | 5-157 |
| Cow position: | chr5:45036851-45037000 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 5-157 |
| Cow position: | chr5:47313303-47313455 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 9, 13 |
| Conread position: | 5-157 |
| Cow position: | chr5:47871221-47871063 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 5-157 |
| Cow position: | chr5:65933102-65932949 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 5-158 |
| Cow position: | chr5:62172248-62172394 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 16, 30 |
| Conread position: | 5-159 |
| Cow position: | chr5:6045117-6045272 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 5-159 |
| Cow position: | chr5:7044881-7044726 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 5-159 |
| Cow position: | chr5:9859889-9859733 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 16, 114 |
| Conread position: | 5-159 |
| Cow position: | chr5:14314351-14314506 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 5-159 |
| Cow position: | chr5:19470357-19470208 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 16, 110 |
| Conread position: | 5-159 |
| Cow position: | chr5:21828694-21828847 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 16, 48 |
| Conread position: | 5-159 |
| Cow position: | chr5:22242956-22242795 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 133 |
| Conread position: | 5-159 |
| Cow position: | chr5:30253571-30253722 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 16, 38 |
| Conread position: | 5-159 |
| Cow position: | chr5:34638715-34638865 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 12, 40 |
| Conread position: | 5-159 |
| Cow position: | chr5:47601646-47601800 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 16, 25 |
| Conread position: | 5-159 |
| Cow position: | chr5:50943324-50943166 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 16, 135 |
| Conread position: | 5-159 |
| Cow position: | chr5:51357674-51357519 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 5-159 |
| Cow position: | chr5:53835544-53835694 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 16, 29 |
| Conread position: | 5-159 |
| Cow position: | chr5:54530812-54530958 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 16, 95 |
| Conread position: | 5-159 |
| Cow position: | chr5:55967053-55966898 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 5-159 |
| Cow position: | chr5:57074505-57074353 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 16, 53 |
| Conread position: | 5-159 |
| Cow position: | chr5:61810622-61810767 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 16, 30 |
| Conread position: | 5-159 |
| Cow position: | chr5:62826924-62826773 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 5-159 |
| Cow position: | chr5:64321578-64321735 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 16, 96 |
| Conread position: | 5-159 |
| Cow position: | chr5:65752686-65752838 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 38 |
| Conread position: | 5-159 |
| Cow position: | chr5:66403973-66404118 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 16, 29 |
| Conread position: | 5-159 |
| Cow position: | chr5:69461164-69461311 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 9, 33 |
| Conread position: | 5-160 |
| Cow position: | chr5:63388624-63388776 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 96 |
| Conread position: | 5-162 |
| Cow position: | chr5:28926358-28926197 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 5-192 |
| Cow position: | chr5:37646721-37646534 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 16, 68 |
| Conread position: | 6-155 |
| Cow position: | chr5:52000049-52000199 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 6-158 |
| Cow position: | chr5:21524995-21525151 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 6-159 |
| Cow position: | chr5:48010016-48009867 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 47 |
| Conread position: | 7-158 |
| Cow position: | chr5:56028699-56028548 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 129 |
| Conread position: | 8-147 |
| Cow position: | chr5:69099361-69099501 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 8-150 |
| Cow position: | chr5:64139395-64139538 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 8-151 |
| Cow position: | chr5:8179011-8179156 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 8-151 |
| Cow position: | chr5:8994733-8994595 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 8-151 |
| Cow position: | chr5:14550753-14550608 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 8-152 |
| Cow position: | chr5:37645906-37646048 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 6, 52 |
| Conread position: | 8-153 |
| Cow position: | chr5:34915974-34916114 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 46 |
| Conread position: | 8-153 |
| Cow position: | chr5:35826423-35826578 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 8-155 |
| Cow position: | chr5:26505573-26505424 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 8-155 |
| Cow position: | chr5:50052461-50052610 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 8-155 |
| Cow position: | chr5:57706748-57706897 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 8-155 |
| Cow position: | chr5:65941421-65941275 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 13, 122 |
| Conread position: | 8-156 |
| Cow position: | chr5:43816779-43816632 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 114 |
| Conread position: | 8-157 |
| Cow position: | chr5:30950087-30949938 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 6, 134 |
| Conread position: | 8-157 |
| Cow position: | chr5:41010164-41010018 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 6, 115 |
| Conread position: | 8-157 |
| Cow position: | chr5:50215727-50215576 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 8-157 |
| Cow position: | chr5:52165350-52165199 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 8-157 |
| Cow position: | chr5:57327625-57327776 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 8-157 |
| Cow position: | chr5:61875345-61875205 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 50 |
| Conread position: | 8-158 |
| Cow position: | chr5:17087196-17087043 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 6, 144 |
| Conread position: | 8-158 |
| Cow position: | chr5:34561841-34561993 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 8-158 |
| Cow position: | chr5:71722893-71723049 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 8-159 |
| Cow position: | chr5:5111244-5111094 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 13, 68 |
| Conread position: | 8-159 |
| Cow position: | chr5:6670365-6670214 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 118 |
| Conread position: | 8-159 |
| Cow position: | chr5:9894293-9894145 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 132, 29 |
| Conread position: | 8-159 |
| Cow position: | chr5:24996393-24996242 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-159 |
| Cow position: | chr5:26467452-26467604 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 8-159 |
| Cow position: | chr5:35684767-35684917 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 13, 107 |
| Conread position: | 8-159 |
| Cow position: | chr5:45472098-45472261 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 13, 48 |
| Conread position: | 8-159 |
| Cow position: | chr5:45803893-45804040 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 13, 19 |
| Conread position: | 8-159 |
| Cow position: | chr5:50599886-50600034 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 13, 52 |
| Conread position: | 8-159 |
| Cow position: | chr5:56070685-56070837 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 8-159 |
| Cow position: | chr5:64823480-64823334 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 6, 57 |
| Conread position: | 8-159 |
| Cow position: | chr5:66257474-66257619 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 45 |
| Conread position: | 8-170 |
| Cow position: | chr5:56317127-56317289 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 13, 109 |
| Conread position: | 9-151 |
| Cow position: | chr5:50950387-50950527 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 20 |
| Conread position: | 9-159 |
| Cow position: | chr5:61600246-61600400 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 10-144 |
| Cow position: | chr5:50870376-50870512 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 12-157 |
| Cow position: | chr5:65776548-65776403 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-155 |
| Cow position: | chr5:62107655-62107514 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-157 |
| Cow position: | chr5:14629975-14629834 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 15-159 |
| Cow position: | chr5:30276534-30276678 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-152 |
| Cow position: | chr5:47696600-47696470 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 19-157 |
| Cow position: | chr5:35247266-35247134 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 20-148 |
| Cow position: | chr5:6286581-6286454 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 20-151 |
| Cow position: | chr5:45845850-45845721 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 20-156 |
| Cow position: | chr5:55942552-55942418 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 20-157 |
| Cow position: | chr5:16508936-16509075 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 41, 34 |
| Conread position: | 20-157 |
| Cow position: | chr5:38832965-38833100 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 20-157 |
| Cow position: | chr5:55176732-55176869 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-157 |
| Cow position: | chr5:56820416-56820283 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 20-157 |
| Cow position: | chr5:66972269-66972407 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 20-158 |
| Cow position: | chr5:12673619-12673488 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 14, 43 |
| Conread position: | 20-158 |
| Cow position: | chr5:46512921-46512783 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-159 |
| Cow position: | chr5:3627311-3627171 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 20-159 |
| Cow position: | chr5:6086716-6086577 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-159 |
| Cow position: | chr5:25231162-25231029 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 20-159 |
| Cow position: | chr5:27015526-27015662 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 20-159 |
| Cow position: | chr5:27154865-27155005 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 89, 69 |
| Conread position: | 20-159 |
| Cow position: | chr5:30302741-30302874 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 20-159 |
| Cow position: | chr5:32963784-32963650 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 22 |
| Conread position: | 20-159 |
| Cow position: | chr5:34288625-34288490 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 20-159 |
| Cow position: | chr5:42050393-42050531 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 20-159 |
| Cow position: | chr5:56433644-56433785 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 20-159 |
| Cow position: | chr5:56524017-56524150 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 20-159 |
| Cow position: | chr5:57935267-57935128 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 123 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-159 |
| Cow position: | chr5:65967886-65967753 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 20-163 |
| Cow position: | chr5:31469739-31469597 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 69, 34 |
| Conread position: | 20-200 |
| Cow position: | chr5:28324194-28324376 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 144 |
| Conread position: | 20-201 |
| Cow position: | chr5:4032149-4031973 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 69, 37 |
| Conread position: | 21-125 |
| Cow position: | chr5:15363737-15363841 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-143 |
| Cow position: | chr5:15598387-15598268 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 21-165 |
| Cow position: | chr5:11427395-11427247 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 21-167 |
| Cow position: | chr5:12351943-12351800 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 139, 41 |
| Conread position: | 22-159 |
| Cow position: | chr5:17768299-17768163 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 22-159 |
| Cow position: | chr5:27492325-27492461 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 117 |
| Conread position: | 23-140 |
| Cow position: | chr5:47888866-47888747 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 23-156 |
| Cow position: | chr5:46122505-46122372 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-159 |
| Cow position: | chr5:16893926-16893792 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 24-159 |
| Cow position: | chr5:50821628-50821763 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-157 |
| Cow position: | chr5:16206308-16206176 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 26-159 |
| Cow position: | chr5:63185402-63185275 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 26-161 |
| Cow position: | chr5:19278853-19278717 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 27-158 |
| Cow position: | chr5:63865644-63865775 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 29-154 |
| Cow position: | chr5:37814473-37814597 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 21, 38 |
| Conread position: | 29-155 |
| Cow position: | chr5:11229818-11229692 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 29-159 |
| Cow position: | chr5:30629308-30629178 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 5, 113 |
| Conread position: | 29-159 |
| Cow position: | chr5:60520016-60520143 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 32-159 |
| Cow position: | chr5:31144933-31144808 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 33-159 |
| Cow position: | chr5:60126228-60126352 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 33-159 |
| Cow position: | chr5:70952021-70951895 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-159 |
| Cow position: | chr5:25035383-25035262 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 37-159 |
| Cow position: | chr5:64027149-64027027 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 38-156 |
| Cow position: | chr5:7755702-7755584 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 38-156 |
| Cow position: | chr5:72150107-72150225 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 41-157 |
| Cow position: | chr5:6683492-6683376 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 49 |
| Conread position: | 42-157 |
| Cow position: | chr5:7921536-7921421 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 44-158 |
| Cow position: | chr5:991332-991446 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 44-159 |
| Cow position: | chr5:44447002-44446887 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.