Cow genome map
| Conread name: | Ss1.1-Lym2-sn59_F12.f.5 |
| Conread position: | 1-253 |
| Cow position: | chr1:45073054-45072801 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 211, 22 |
| Conread position: | 1-253 |
| Cow position: | chr1:74534359-74534605 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-253 |
| Cow position: | chr1:77187819-77187571 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 20 |
| Conread position: | 1-273 |
| Cow position: | chr1:99225796-99226052 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 2-168 |
| Cow position: | chr1:67323183-67323345 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 2-250 |
| Cow position: | chr1:17070397-17070164 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 2-251 |
| Cow position: | chr1:84003606-84003850 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 2-251 |
| Cow position: | chr1:86650361-86650608 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 2-253 |
| Cow position: | chr1:9455428-9455677 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 21 |
| Conread position: | 2-253 |
| Cow position: | chr1:12974001-12974250 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 21 |
| Conread position: | 2-253 |
| Cow position: | chr1:25256373-25256620 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 2-253 |
| Cow position: | chr1:32664615-32664366 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 20, 108 |
| Conread position: | 2-253 |
| Cow position: | chr1:37197288-37197048 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 2-253 |
| Cow position: | chr1:48561464-48561708 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 2-253 |
| Cow position: | chr1:88632639-88632886 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 2-253 |
| Cow position: | chr1:96625471-96625717 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 5-251 |
| Cow position: | chr1:44961709-44961456 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 196 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 98, 9 |
| Conread position: | 5-252 |
| Cow position: | chr1:57080865-57080621 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 5-253 |
| Cow position: | chr1:28882786-28882546 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 7-124 |
| Cow position: | chr1:99068293-99068409 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 8-285 |
| Cow position: | chr1:71333303-71333043 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 10-253 |
| Cow position: | chr1:57736420-57736661 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 120, 11 |
| Conread position: | 11-249 |
| Cow position: | chr1:78918247-78918471 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 137, 13 |
Show alignments to all cow chromosomes.