Cow genome map

Conread name: Ss1.1-Lym2-sn59_F12.f.5

Conread position: 1-203
Cow position: chr2:20378278-20378086 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 1-253
Cow position: chr2:55039227-55039471 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 158, 22

Conread position: 1-253
Cow position: chr2:79447862-79448094 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 195
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 22, 0

Conread position: 1-254
Cow position: chr2:85509574-85509334 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 194
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 131, 20

Conread position: 1-285
Cow position: chr2:74083801-74084074 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 0

Conread position: 2-236
Cow position: chr2:34581076-34581296 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 21, 0

Conread position: 2-251
Cow position: chr2:39651080-39651324 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 22

Conread position: 2-251
Cow position: chr2:64106517-64106274 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 190
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 87, 19

Conread position: 2-253
Cow position: chr2:6321381-6321629 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 21, 0

Conread position: 2-253
Cow position: chr2:6791588-6791347 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 19, 0

Conread position: 2-253
Cow position: chr2:36096948-36096707 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 19, 0

Conread position: 2-285
Cow position: chr2:28891445-28891720 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 21

Conread position: 4-249
Cow position: chr2:10109816-10109573 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 4-253
Cow position: chr2:38086542-38086789 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 5-253
Cow position: chr2:23937079-23936828 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 29, 16

Conread position: 5-253
Cow position: chr2:48628932-48629173 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-253
Cow position: chr2:21717618-21717859 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 10-227
Cow position: chr2:16139784-16139571 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 192, 11

Conread position: 10-251
Cow position: chr2:49884051-49883807 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 57

Conread position: 10-253
Cow position: chr2:53352104-53352337 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 13, 0

Conread position: 14-253
Cow position: chr2:65423130-65423368 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 10

Conread position: 17-253
Cow position: chr2:14922626-14922397 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 183
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 94, 19

Conread position: 23-153
Cow position: chr2:26512608-26512738 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 43-272
Cow position: chr2:31378084-31377855 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 140

Conread position: 51-254
Cow position: chr2:33832417-33832619 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 49, 77

Conread position: 83-271
Cow position: chr2:66144130-66144318 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 75, 90

Conread position: 87-253
Cow position: chr2:3532451-3532617 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 103, 87

Conread position: 106-252
Cow position: chr2:62250700-62250556 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 8, 0

Show alignments to all cow chromosomes.