Cow genome map


           Conread name:
           Ss1.1-Lym2-sn59_F12.f.5
        

               Conread position:
               1-161
               

               Cow position:
               chr20:22658175-22658017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               1-252
               

               Cow position:
               chr20:15256948-15256699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 20
               

               Conread position:
               5-237
               

               Cow position:
               chr20:19147645-19147852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               5-285
               

               Cow position:
               chr20:25304215-25304469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               10-253
               

               Cow position:
               chr20:2974517-2974274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 13
               

               Conread position:
               11-253
               

               Cow position:
               chr20:37989965-37989734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               23-163
               

               Cow position:
               chr20:22862010-22862148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               116, 0
               
Show alignments to all cow chromosomes.