Cow genome map


           Conread name:
           Ss1.1-Lym2-sn59_F12.f.5
        

               Conread position:
               1-244
               

               Cow position:
               chr27:755104-755345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               35, 20
               

               Conread position:
               2-152
               

               Cow position:
               chr27:30595038-30595188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               2-254
               

               Cow position:
               chr27:29486760-29486512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               197
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               33, 22
               

               Conread position:
               5-253
               

               Cow position:
               chr27:27604408-27604637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               24-217
               

               Cow position:
               chr27:7962928-7963120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               35-251
               

               Cow position:
               chr27:5470658-5470445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               104, 30
               
Show alignments to all cow chromosomes.