Cow genome map
| Conread name: | Ss1.1-Lym2-sn59_F12.f.5 |
| Conread position: | 1-110 |
| Cow position: | chr3:47472591-47472483 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-252 |
| Cow position: | chr3:8530312-8530071 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-252 |
| Cow position: | chr3:54663223-54663475 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 171, 22 |
| Conread position: | 2-168 |
| Cow position: | chr3:42028973-42029128 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 2-250 |
| Cow position: | chr3:50293214-50292977 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 2-253 |
| Cow position: | chr3:5417009-5417259 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 21 |
| Conread position: | 2-253 |
| Cow position: | chr3:34589451-34589697 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 2-253 |
| Cow position: | chr3:59812178-59812432 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 199 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 181, 19 |
| Conread position: | 2-253 |
| Cow position: | chr3:62023016-62022776 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 192 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 4-253 |
| Cow position: | chr3:77777863-77777621 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 5-181 |
| Cow position: | chr3:73835204-73835378 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 147 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 5-206 |
| Cow position: | chr3:18540873-18541070 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 5-237 |
| Cow position: | chr3:18358633-18358414 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 5-253 |
| Cow position: | chr3:68943097-68943345 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 18 |
| Conread position: | 9-249 |
| Cow position: | chr3:7044745-7044501 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 17-153 |
| Cow position: | chr3:12615208-12615073 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 23-285 |
| Cow position: | chr3:13104135-13103896 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 186, 56 |
| Conread position: | 25-253 |
| Cow position: | chr3:45847173-45847401 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 62 |
| Conread position: | 32-251 |
| Cow position: | chr3:84018961-84019176 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 171 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 34-209 |
| Cow position: | chr3:52155096-52155268 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 51-254 |
| Cow position: | chr3:45879752-45879553 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 70-253 |
| Cow position: | chr3:38334638-38334456 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 103-253 |
| Cow position: | chr3:58852608-58852757 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 141-253 |
| Cow position: | chr3:12615030-12614919 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
Show alignments to all cow chromosomes.