Cow genome map
| Conread name: | Ss1.1-Lym2-sn59_F12.f.5 |
| Conread position: | 1-252 |
| Cow position: | chr6:67790714-67790961 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 112, 20 |
| Conread position: | 1-253 |
| Cow position: | chr6:51030189-51029949 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 192 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 199, 27 |
| Conread position: | 2-181 |
| Cow position: | chr6:6479774-6479597 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 2-251 |
| Cow position: | chr6:46660090-46659847 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 2-251 |
| Cow position: | chr6:49329558-49329315 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 2-252 |
| Cow position: | chr6:37360894-37360658 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 130, 22 |
| Conread position: | 2-253 |
| Cow position: | chr6:6662633-6662885 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 19 |
| Conread position: | 2-303 |
| Cow position: | chr6:57368935-57369225 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 5-176 |
| Cow position: | chr6:32285688-32285521 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 5-233 |
| Cow position: | chr6:169351-169132 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 5-253 |
| Cow position: | chr6:5848855-5848609 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 8-233 |
| Cow position: | chr6:33131901-33131690 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 10-262 |
| Cow position: | chr6:13285404-13285647 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 11 |
| Conread position: | 25-253 |
| Cow position: | chr6:68277170-68276950 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 172, 83 |
| Conread position: | 26-251 |
| Cow position: | chr6:6517220-6517011 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 29-196 |
| Cow position: | chr6:42097804-42097644 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 37-228 |
| Cow position: | chr6:14633177-14633362 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 51-285 |
| Cow position: | chr6:56337648-56337879 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 223, 123 |
| Conread position: | 97-253 |
| Cow position: | chr6:35953276-35953428 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 141-285 |
| Cow position: | chr6:44704982-44704842 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
Show alignments to all cow chromosomes.