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Cow genome map

           
Conread name:
           
Ss1.1-Lym2-sn70_D11.f.5
        

               
Conread position:
               
578-891
               

               
Cow position:
               
chr13:15144151-15144454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 68
               

               
Conread position:
               
626-994
               

               
Cow position:
               
chr13:1363868-1363500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
25, 17
               

               
Conread position:
               
637-949
               

               
Cow position:
               
chr13:60974246-60973936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
63, 10
               

               
Conread position:
               
645-1003
               

               
Cow position:
               
chr13:20357735-20358085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
27, 134
               

               
Conread position:
               
654-1000
               

               
Cow position:
               
chr13:49022727-49023062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
165, 81
               

               
Conread position:
               
656-944
               

               
Cow position:
               
chr13:52284959-52284674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 85
               

               
Conread position:
               
657-788
               

               
Cow position:
               
chr13:38012501-38012370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
47, 108
               

               
Conread position:
               
658-875
               

               
Cow position:
               
chr13:24376634-24376421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
659-931
               

               
Cow position:
               
chr13:37484131-37484408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
659-1006
               

               
Cow position:
               
chr13:13089166-13088830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
16, 58
               

               
Conread position:
               
659-1006
               

               
Cow position:
               
chr13:61976820-61977160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
17, 126
               

               
Conread position:
               
660-981
               

               
Cow position:
               
chr13:20666247-20666563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
660-1000
               

               
Cow position:
               
chr13:55583338-55582998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
6, 131
               

               
Conread position:
               
660-1006
               

               
Cow position:
               
chr13:11260410-11260075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
661-1007
               

               
Cow position:
               
chr13:17291988-17292331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 182
               

               
Conread position:
               
662-1006
               

               
Cow position:
               
chr13:17437730-17438064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
663-944
               

               
Cow position:
               
chr13:23856350-23856072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 164
               

               
Conread position:
               
664-876
               

               
Cow position:
               
chr13:12618977-12619188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
155, 119
               

               
Conread position:
               
664-884
               

               
Cow position:
               
chr13:60340946-60340725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
664-886
               

               
Cow position:
               
chr13:60329892-60329676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
664-897
               

               
Cow position:
               
chr13:23270071-23270299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
12, 103
               

               
Conread position:
               
664-898
               

               
Cow position:
               
chr13:18244002-18243767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
10, 131
               

               
Conread position:
               
664-927
               

               
Cow position:
               
chr13:56155021-56155275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
9, 78
               

               
Conread position:
               
664-931
               

               
Cow position:
               
chr13:28683501-28683234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 88
               

               
Conread position:
               
664-931
               

               
Cow position:
               
chr13:37981608-37981872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 61
               

               
Conread position:
               
664-932
               

               
Cow position:
               
chr13:25434983-25435252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
126, 174
               

               
Conread position:
               
664-932
               

               
Cow position:
               
chr13:43194314-43194040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
15, 83
               

               
Conread position:
               
664-932
               

               
Cow position:
               
chr13:54094948-54094681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 48
               

               
Conread position:
               
664-943
               

               
Cow position:
               
chr13:16014953-16014671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 93
               

               
Conread position:
               
664-951
               

               
Cow position:
               
chr13:23166960-23167245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
664-951
               

               
Cow position:
               
chr13:51940873-51940588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
139, 145
               

               
Conread position:
               
664-977
               

               
Cow position:
               
chr13:18491741-18491425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
664-1000
               

               
Cow position:
               
chr13:25817659-25817333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 63
               

               
Conread position:
               
664-1001
               

               
Cow position:
               
chr13:54388879-54389215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 176
               

               
Conread position:
               
664-1002
               

               
Cow position:
               
chr13:6974300-6973964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
35, 121
               

               
Conread position:
               
664-1006
               

               
Cow position:
               
chr13:971754-972099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 178
               

               
Conread position:
               
664-1006
               

               
Cow position:
               
chr13:5758203-5758534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
13, 113
               

               
Conread position:
               
664-1006
               

               
Cow position:
               
chr13:14063386-14063723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 12
               

               
Conread position:
               
664-1006
               

               
Cow position:
               
chr13:18058107-18058449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 177
               

               
Conread position:
               
664-1006
               

               
Cow position:
               
chr13:18166872-18166530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
13, 100
               

               
Conread position:
               
664-1006
               

               
Cow position:
               
chr13:21287948-21288287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
664-1006
               

               
Cow position:
               
chr13:22085609-22085934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 12
               

               
Conread position:
               
664-1006
               

               
Cow position:
               
chr13:35659891-35659552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
8, 146
               

               
Conread position:
               
664-1006
               

               
Cow position:
               
chr13:42200757-42200418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
664-1006
               

               
Cow position:
               
chr13:52749339-52749665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 76
               

               
Conread position:
               
664-1006
               

               
Cow position:
               
chr13:52894286-52893946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
12, 93
               

               
Conread position:
               
665-888
               

               
Cow position:
               
chr13:25062547-25062328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 93
               

               
Conread position:
               
666-875
               

               
Cow position:
               
chr13:41253759-41253549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 145
               

               
Conread position:
               
666-998
               

               
Cow position:
               
chr13:39232697-39233021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 112
               

               
Conread position:
               
666-998
               

               
Cow position:
               
chr13:52227963-52228292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 115
               

               
Conread position:
               
666-1000
               

               
Cow position:
               
chr13:52284045-52283712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 40
               

               
Conread position:
               
667-899
               

               
Cow position:
               
chr13:8524486-8524714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
5, 49
               

               
Conread position:
               
669-1003
               

               
Cow position:
               
chr13:17338570-17338226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
670-897
               

               
Cow position:
               
chr13:25381093-25380868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 126
               

               
Conread position:
               
671-795
               

               
Cow position:
               
chr13:21209988-21209865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
106, 63
               

               
Conread position:
               
671-811
               

               
Cow position:
               
chr13:37517006-37517145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 123
               

               
Conread position:
               
671-817
               

               
Cow position:
               
chr13:563013-563157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
671-824
               

               
Cow position:
               
chr13:20863886-20864038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
127, 39
               

               
Conread position:
               
671-835
               

               
Cow position:
               
chr13:13265937-13265773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
147, 78
               

               
Conread position:
               
671-851
               

               
Cow position:
               
chr13:19178406-19178224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
28, 168
               

               
Conread position:
               
671-859
               

               
Cow position:
               
chr13:28652929-28652747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
76, 56
               

               
Conread position:
               
671-864
               

               
Cow position:
               
chr13:10098861-10099049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
148, 95
               

               
Conread position:
               
671-883
               

               
Cow position:
               
chr13:52929839-52929631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
671-884
               

               
Cow position:
               
chr13:40652063-40651853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
33, 51
               

               
Conread position:
               
671-886
               

               
Cow position:
               
chr13:34375400-34375176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 175
               

               
Conread position:
               
671-888
               

               
Cow position:
               
chr13:46181919-46181707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
671-893
               

               
Cow position:
               
chr13:62601135-62600917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
171, 39
               

               
Conread position:
               
671-896
               

               
Cow position:
               
chr13:53566725-53566508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
116, 124
               

               
Conread position:
               
671-897
               

               
Cow position:
               
chr13:6153652-6153878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
32, 166
               

               
Conread position:
               
671-897
               

               
Cow position:
               
chr13:60429944-60430173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
28, 188
               

               
Conread position:
               
671-898
               

               
Cow position:
               
chr13:11954980-11955212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
671-899
               

               
Cow position:
               
chr13:17622411-17622192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
148, 87
               

               
Conread position:
               
671-917
               

               
Cow position:
               
chr13:8374642-8374886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
147, 116
               

               
Conread position:
               
671-922
               

               
Cow position:
               
chr13:31814001-31813757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
141, 78
               

               
Conread position:
               
671-923
               

               
Cow position:
               
chr13:9593638-9593386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
115, 172
               

               
Conread position:
               
671-923
               

               
Cow position:
               
chr13:15903146-15902904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
148, 64
               

               
Conread position:
               
671-926
               

               
Cow position:
               
chr13:15110450-15110191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 142
               

               
Conread position:
               
671-928
               

               
Cow position:
               
chr13:17966079-17966336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
148, 111
               

               
Conread position:
               
671-932
               

               
Cow position:
               
chr13:10928864-10929117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
148, 12
               

               
Conread position:
               
671-932
               

               
Cow position:
               
chr13:11381592-11381852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
110, 78
               

               
Conread position:
               
671-937
               

               
Cow position:
               
chr13:25537762-25537487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
67, 145
               

               
Conread position:
               
671-937
               

               
Cow position:
               
chr13:43762299-43762037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
148, 76
               

               
Conread position:
               
671-938
               

               
Cow position:
               
chr13:11460751-11460497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
150, 52
               

               
Conread position:
               
671-943
               

               
Cow position:
               
chr13:20683991-20684269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
197, 165
               

               
Conread position:
               
671-946
               

               
Cow position:
               
chr13:21176192-21176461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
148, 122
               

               
Conread position:
               
671-947
               

               
Cow position:
               
chr13:2414160-2413887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 113
               

               
Conread position:
               
671-950
               

               
Cow position:
               
chr13:15281807-15282083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 119
               

               
Conread position:
               
671-951
               

               
Cow position:
               
chr13:6389510-6389248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
88, 112
               

               
Conread position:
               
671-951
               

               
Cow position:
               
chr13:14771587-14771304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 138
               

               
Conread position:
               
671-951
               

               
Cow position:
               
chr13:17439640-17439914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 132
               

               
Conread position:
               
671-951
               

               
Cow position:
               
chr13:17800202-17799929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
111, 52
               

               
Conread position:
               
671-951
               

               
Cow position:
               
chr13:17970898-17971179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
119, 79
               

               
Conread position:
               
671-951
               

               
Cow position:
               
chr13:18696972-18696693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
112, 44
               

               
Conread position:
               
671-951
               

               
Cow position:
               
chr13:20706076-20706351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
107, 123
               

               
Conread position:
               
671-951
               

               
Cow position:
               
chr13:23960683-23960948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
671-951
               

               
Cow position:
               
chr13:37640716-37640440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 51
               

               
Conread position:
               
671-951
               

               
Cow position:
               
chr13:40943374-40943095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
671-954
               

               
Cow position:
               
chr13:13176780-13176496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
103, 9
               

               
Conread position:
               
671-979
               

               
Cow position:
               
chr13:12448862-12449165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 114
               

               
Conread position:
               
671-981
               

               
Cow position:
               
chr13:23479156-23478851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
148, 14
               

               
Conread position:
               
671-991
               

               
Cow position:
               
chr13:60508989-60509311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 70
               

               
Conread position:
               
671-995
               

               
Cow position:
               
chr13:24230342-24230018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
29, 113
               

               
Conread position:
               
671-997
               

               
Cow position:
               
chr13:17855500-17855174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
163, 33
               

               
Conread position:
               
671-999
               

               
Cow position:
               
chr13:6663621-6663951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
106, 34
               

               
Conread position:
               
671-1000
               

               
Cow position:
               
chr13:15288799-15289115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
671-1000
               

               
Cow position:
               
chr13:20360400-20360079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
149, 63
               

               
Conread position:
               
671-1001
               

               
Cow position:
               
chr13:13261134-13260794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 167
               

               
Conread position:
               
671-1002
               

               
Cow position:
               
chr13:38329756-38329420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 174
               

               
Conread position:
               
671-1003
               

               
Cow position:
               
chr13:607135-607462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 107
               

               
Conread position:
               
671-1003
               

               
Cow position:
               
chr13:12670318-12670651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
110, 52
               

               
Conread position:
               
671-1003
               

               
Cow position:
               
chr13:17021599-17021925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 122
               

               
Conread position:
               
671-1003
               

               
Cow position:
               
chr13:19022405-19022065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 168
               

               
Conread position:
               
671-1003
               

               
Cow position:
               
chr13:21235557-21235867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
671-1003
               

               
Cow position:
               
chr13:24369710-24369386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 64
               

               
Conread position:
               
671-1003
               

               
Cow position:
               
chr13:37818619-37818943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 169
               

               
Conread position:
               
671-1003
               

               
Cow position:
               
chr13:43480187-43479862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 122
               

               
Conread position:
               
671-1003
               

               
Cow position:
               
chr13:45023082-45023422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 92
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr13:311560-311230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
131, 116
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr13:5279055-5279409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
32, 154
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr13:6079289-6079605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
148, 115
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr13:6616622-6616965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr13:9906863-9906526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
149, 110
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr13:12045208-12045548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr13:14878822-14879157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 51
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr13:18999672-18999329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr13:19188431-19188112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
33, 123
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr13:20820706-20821039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
148, 92
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr13:21275985-21275654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
38, 61
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr13:26698367-26698699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
50, 134
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr13:27525135-27525461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
148, 110
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr13:42114151-42113813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
33, 106
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr13:51528317-51528640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
252, 52
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr13:54583007-54582672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 168
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr13:54702317-54701979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 124
               

               
Conread position:
               
671-1007
               

               
Cow position:
               
chr13:12207173-12206858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
168, 105
               

               
Conread position:
               
671-1007
               

               
Cow position:
               
chr13:15869251-15868906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
148, 33
               

               
Conread position:
               
671-1007
               

               
Cow position:
               
chr13:17745369-17745055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
148, 56
               

               
Conread position:
               
671-1007
               

               
Cow position:
               
chr13:26480083-26480406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
671-1007
               

               
Cow position:
               
chr13:29831303-29831630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
28, 116
               

               
Conread position:
               
671-1007
               

               
Cow position:
               
chr13:37592808-37593149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
31, 131
               

               
Conread position:
               
671-1007
               

               
Cow position:
               
chr13:45353176-45352824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
671-1007
               

               
Cow position:
               
chr13:49503402-49503741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
148, 12
               

               
Conread position:
               
672-869
               

               
Cow position:
               
chr13:20128794-20128600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
53, 115
               

               
Conread position:
               
672-884
               

               
Cow position:
               
chr13:20563125-20562912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
31, 149
               

               
Conread position:
               
672-899
               

               
Cow position:
               
chr13:6060881-6061104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
147, 86
               

               
Conread position:
               
672-918
               

               
Cow position:
               
chr13:13238706-13238463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
32, 50
               

               
Conread position:
               
672-922
               

               
Cow position:
               
chr13:10845722-10845485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
180, 40
               

               
Conread position:
               
672-930
               

               
Cow position:
               
chr13:13501494-13501745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
147, 36
               

               
Conread position:
               
672-951
               

               
Cow position:
               
chr13:3315549-3315819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
672-952
               

               
Cow position:
               
chr13:49520693-49520970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
148, 116
               

               
Conread position:
               
672-954
               

               
Cow position:
               
chr13:28689597-28689315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
53, 18
               

               
Conread position:
               
672-978
               

               
Cow position:
               
chr13:6086775-6087067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
282, 35
               

               
Conread position:
               
672-997
               

               
Cow position:
               
chr13:13338989-13338665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 124
               

               
Conread position:
               
672-998
               

               
Cow position:
               
chr13:34263240-34263567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 99
               

               
Conread position:
               
672-1000
               

               
Cow position:
               
chr13:6849059-6848728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
672-1000
               

               
Cow position:
               
chr13:55674080-55674406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 99
               

               
Conread position:
               
672-1003
               

               
Cow position:
               
chr13:13954259-13954595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
32, 125
               

               
Conread position:
               
672-1003
               

               
Cow position:
               
chr13:19393418-19393097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
106, 41
               

               
Conread position:
               
672-1004
               

               
Cow position:
               
chr13:25579058-25579395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 63
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr13:6441971-6442309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
15, 156
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr13:7059600-7059256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
31, 149
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr13:13320913-13320595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
147, 41
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr13:17451223-17450890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
149, 32
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr13:17568970-17569299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 133
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr13:19023715-19024054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr13:21107267-21106941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
66, 74
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr13:21241964-21242278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
147, 59
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr13:34281805-34281479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 104
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr13:41806904-41806574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 166
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr13:56686561-56686241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
106, 58
               

               
Conread position:
               
672-1007
               

               
Cow position:
               
chr13:21269451-21269784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
32, 104
               

               
Conread position:
               
675-785
               

               
Cow position:
               
chr13:48372790-48372898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
675-811
               

               
Cow position:
               
chr13:15172285-15172422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
675-834
               

               
Cow position:
               
chr13:12682419-12682578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
110, 68
               

               
Conread position:
               
675-884
               

               
Cow position:
               
chr13:17613472-17613259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 165
               

               
Conread position:
               
675-884
               

               
Cow position:
               
chr13:46324659-46324870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
27, 103
               

               
Conread position:
               
675-887
               

               
Cow position:
               
chr13:25531662-25531874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
115, 164
               

               
Conread position:
               
675-897
               

               
Cow position:
               
chr13:23512493-23512275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 100
               

               
Conread position:
               
675-899
               

               
Cow position:
               
chr13:1042835-1043065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 126
               

               
Conread position:
               
675-907
               

               
Cow position:
               
chr13:8201360-8201587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
157, 33
               

               
Conread position:
               
675-908
               

               
Cow position:
               
chr13:34555707-34555933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
121, 5
               

               
Conread position:
               
675-925
               

               
Cow position:
               
chr13:15528906-15529159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
144, 162
               

               
Conread position:
               
675-937
               

               
Cow position:
               
chr13:48037747-48037491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
220, 161
               

               
Conread position:
               
675-951
               

               
Cow position:
               
chr13:7076383-7076111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
69, 61
               

               
Conread position:
               
675-951
               

               
Cow position:
               
chr13:51115902-51116169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
123, 52
               

               
Conread position:
               
675-1001
               

               
Cow position:
               
chr13:15991101-15991428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 116
               

               
Conread position:
               
675-1001
               

               
Cow position:
               
chr13:44626498-44626168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
675-1003
               

               
Cow position:
               
chr13:24715370-24715050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
29, 108
               

               
Conread position:
               
675-1006
               

               
Cow position:
               
chr13:2822985-2822665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
163, 29
               

               
Conread position:
               
675-1006
               

               
Cow position:
               
chr13:12989970-12989660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
43, 126
               

               
Conread position:
               
675-1006
               

               
Cow position:
               
chr13:18852206-18851886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
144, 182
               

               
Conread position:
               
675-1006
               

               
Cow position:
               
chr13:20217262-20217600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
33, 48
               

               
Conread position:
               
675-1006
               

               
Cow position:
               
chr13:20784714-20784392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 60
               

               
Conread position:
               
675-1006
               

               
Cow position:
               
chr13:24586167-24585846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 56
               

               
Conread position:
               
675-1006
               

               
Cow position:
               
chr13:25926918-25926586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
29, 85
               

               
Conread position:
               
675-1006
               

               
Cow position:
               
chr13:44323026-44322690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
107, 68
               

               
Conread position:
               
675-1006
               

               
Cow position:
               
chr13:52055473-52055795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
146, 33
               

               
Conread position:
               
675-1007
               

               
Cow position:
               
chr13:19223771-19223448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
214, 113
               

               
Conread position:
               
677-1003
               

               
Cow position:
               
chr13:1569047-1568735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 117
               

               
Conread position:
               
678-849
               

               
Cow position:
               
chr13:52922215-52922049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
133, 98
               

               
Conread position:
               
678-867
               

               
Cow position:
               
chr13:16024714-16024525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
31, 117
               

               
Conread position:
               
678-884
               

               
Cow position:
               
chr13:20649856-20650068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
28, 164
               

               
Conread position:
               
678-898
               

               
Cow position:
               
chr13:45726019-45725797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
31, 110
               

               
Conread position:
               
678-917
               

               
Cow position:
               
chr13:15166942-15166704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
99, 110
               

               
Conread position:
               
678-938
               

               
Cow position:
               
chr13:11820715-11820464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
141, 10
               

               
Conread position:
               
678-940
               

               
Cow position:
               
chr13:12202489-12202223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
99, 160
               

               
Conread position:
               
678-944
               

               
Cow position:
               
chr13:43184750-43185019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
104, 9
               

               
Conread position:
               
678-944
               

               
Cow position:
               
chr13:55316066-55316340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
139, 159
               

               
Conread position:
               
678-950
               

               
Cow position:
               
chr13:37804002-37803748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
179, 67
               

               
Conread position:
               
678-951
               

               
Cow position:
               
chr13:2774250-2773979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
141, 104
               

               
Conread position:
               
678-951
               

               
Cow position:
               
chr13:36771296-36771569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 139
               

               
Conread position:
               
678-951
               

               
Cow position:
               
chr13:37381929-37381655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 115
               

               
Conread position:
               
678-952
               

               
Cow position:
               
chr13:547608-547344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 69
               

               
Conread position:
               
678-965
               

               
Cow position:
               
chr13:38283863-38284140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
101, 71
               

               
Conread position:
               
678-979
               

               
Cow position:
               
chr13:14016446-14016738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 110
               

               
Conread position:
               
678-981
               

               
Cow position:
               
chr13:53574093-53573796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
105, 122
               

               
Conread position:
               
678-1003
               

               
Cow position:
               
chr13:39826676-39826356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 101
               

               
Conread position:
               
678-1003
               

               
Cow position:
               
chr13:48165302-48165622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
96, 55
               

               
Conread position:
               
678-1004
               

               
Cow position:
               
chr13:49805094-49804788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
678-1006
               

               
Cow position:
               
chr13:2803592-2803284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
678-1006
               

               
Cow position:
               
chr13:15192767-15193090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
259, 104
               

               
Conread position:
               
678-1006
               

               
Cow position:
               
chr13:17158752-17159084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
141, 119
               

               
Conread position:
               
678-1006
               

               
Cow position:
               
chr13:20288453-20288136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 111
               

               
Conread position:
               
678-1006
               

               
Cow position:
               
chr13:20839686-20839378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
141, 103
               

               
Conread position:
               
678-1006
               

               
Cow position:
               
chr13:48598033-48597707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
24, 123
               

               
Conread position:
               
678-1006
               

               
Cow position:
               
chr13:60375365-60375690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
140, 159
               

               
Conread position:
               
678-1007
               

               
Cow position:
               
chr13:152077-151767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
140, 71
               

               
Conread position:
               
678-1008
               

               
Cow position:
               
chr13:15195081-15195405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 114
               

               
Conread position:
               
679-875
               

               
Cow position:
               
chr13:55295501-55295698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
154, 135
               

               
Conread position:
               
679-899
               

               
Cow position:
               
chr13:15234036-15233830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
141, 66
               

               
Conread position:
               
679-909
               

               
Cow position:
               
chr13:62518210-62518436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
103, 28
               

               
Conread position:
               
679-952
               

               
Cow position:
               
chr13:18172460-18172191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 164
               

               
Conread position:
               
679-1002
               

               
Cow position:
               
chr13:36877194-36876867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
95, 173
               

               
Conread position:
               
679-1003
               

               
Cow position:
               
chr13:11808680-11808382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
140, 52
               

               
Conread position:
               
679-1006
               

               
Cow position:
               
chr13:15041350-15041677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
27, 110
               

               
Conread position:
               
679-1006
               

               
Cow position:
               
chr13:17114257-17114583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
106, 11
               

               
Conread position:
               
679-1006
               

               
Cow position:
               
chr13:19882915-19883236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 16
               

               
Conread position:
               
679-1006
               

               
Cow position:
               
chr13:35526089-35526396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
103, 8
               

               
Conread position:
               
679-1006
               

               
Cow position:
               
chr13:42860452-42860769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 25
               

               
Conread position:
               
679-1006
               

               
Cow position:
               
chr13:47007608-47007915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
140, 51
               

               
Conread position:
               
679-1007
               

               
Cow position:
               
chr13:17821146-17821461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
140, 158
               

               
Conread position:
               
680-826
               

               
Cow position:
               
chr13:52199207-52199062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
139, 103
               

               
Conread position:
               
680-923
               

               
Cow position:
               
chr13:18835313-18835084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
680-1003
               

               
Cow position:
               
chr13:15958744-15958423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 109
               

               
Conread position:
               
680-1006
               

               
Cow position:
               
chr13:20509853-20509525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
680-1006
               

               
Cow position:
               
chr13:30798844-30798508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
680-1007
               

               
Cow position:
               
chr13:5671471-5671789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 15
               

               
Conread position:
               
680-1007
               

               
Cow position:
               
chr13:9846333-9846667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
20, 108
               

               
Conread position:
               
681-1006
               

               
Cow position:
               
chr13:38698172-38697855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 96
               

               
Conread position:
               
682-888
               

               
Cow position:
               
chr13:890053-890254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
139, 67
               

               
Conread position:
               
682-899
               

               
Cow position:
               
chr13:7663305-7663518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
137, 68
               

               
Conread position:
               
682-1002
               

               
Cow position:
               
chr13:15194613-15194919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 156
               

               
Conread position:
               
682-1004
               

               
Cow position:
               
chr13:18995247-18994922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
21, 135
               

               
Conread position:
               
682-1006
               

               
Cow position:
               
chr13:14576325-14576013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
137, 65
               

               
Conread position:
               
682-1007
               

               
Cow position:
               
chr13:19279209-19278892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 8
               

               
Conread position:
               
683-917
               

               
Cow position:
               
chr13:15884902-15885136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
136, 154
               

               
Conread position:
               
683-957
               

               
Cow position:
               
chr13:12546792-12547060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 93
               

               
Conread position:
               
683-1001
               

               
Cow position:
               
chr13:32283242-32282928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
206, 57
               

               
Conread position:
               
683-1006
               

               
Cow position:
               
chr13:5060863-5060536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
683-1006
               

               
Cow position:
               
chr13:21135782-21136114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 109
               

               
Conread position:
               
683-1006
               

               
Cow position:
               
chr13:24753999-24753691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
683-1006
               

               
Cow position:
               
chr13:34261352-34261033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
37, 103
               

               
Conread position:
               
683-1007
               

               
Cow position:
               
chr13:27550857-27550532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 39
               

               
Conread position:
               
684-884
               

               
Cow position:
               
chr13:49507732-49507931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
16, 109
               

               
Conread position:
               
684-926
               

               
Cow position:
               
chr13:57494071-57494312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
99, 79
               

               
Conread position:
               
684-933
               

               
Cow position:
               
chr13:25496123-25495876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
684-1006
               

               
Cow position:
               
chr13:4664750-4665052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
684-1006
               

               
Cow position:
               
chr13:20497766-20497440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 20
               

               
Conread position:
               
684-1006
               

               
Cow position:
               
chr13:57002845-57002520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 98
               

               
Conread position:
               
685-1003
               

               
Cow position:
               
chr13:6189500-6189799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
270, 64
               

               
Conread position:
               
686-1001
               

               
Cow position:
               
chr13:20248624-20248324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
689-923
               

               
Cow position:
               
chr13:47322292-47322530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
18, 153
               

               
Conread position:
               
689-926
               

               
Cow position:
               
chr13:56678127-56677892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
12, 42
               

               
Conread position:
               
690-1002
               

               
Cow position:
               
chr13:16038180-16038481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 91
               

               
Conread position:
               
691-875
               

               
Cow position:
               
chr13:32826346-32826529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
128, 142
               

               
Conread position:
               
691-1001
               

               
Cow position:
               
chr13:16714149-16714463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 135
               

               
Conread position:
               
691-1003
               

               
Cow position:
               
chr13:10924803-10925122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
91, 129
               

               
Conread position:
               
691-1003
               

               
Cow position:
               
chr13:20880816-20881120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 93
               

               
Conread position:
               
693-954
               

               
Cow position:
               
chr13:19320643-19320381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
694-952
               

               
Cow position:
               
chr13:55728006-55727755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
126, 14
               

               
Conread position:
               
695-1007
               

               
Cow position:
               
chr13:13196347-13196038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
87, 99
               

               
Conread position:
               
696-917
               

               
Cow position:
               
chr13:7265020-7265234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
123, 60
               

               
Conread position:
               
696-1008
               

               
Cow position:
               
chr13:12974907-12974611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
285, 18
               

               
Conread position:
               
697-897
               

               
Cow position:
               
chr13:8652335-8652537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
86, 102
               

               
Conread position:
               
698-941
               

               
Cow position:
               
chr13:47022462-47022228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
122, 58
               

               
Conread position:
               
698-1006
               

               
Cow position:
               
chr13:4158766-4158457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
84, 100
               

               
Conread position:
               
698-1006
               

               
Cow position:
               
chr13:15621917-15621607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
83, 118
               

               
Conread position:
               
698-1006
               

               
Cow position:
               
chr13:46329501-46329805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 102
               

               
Conread position:
               
698-1006
               

               
Cow position:
               
chr13:46516163-46515857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
67, 90
               

               
Conread position:
               
698-1006
               

               
Cow position:
               
chr13:54128490-54128800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
56, 77
               

               
Conread position:
               
698-1008
               

               
Cow position:
               
chr13:49476188-49475867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
123, 77
               

               
Conread position:
               
699-1006
               

               
Cow position:
               
chr13:15659377-15659073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
121, 70
               

               
Conread position:
               
699-1007
               

               
Cow position:
               
chr13:20534983-20534697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
238, 51
               

               
Conread position:
               
700-979
               

               
Cow position:
               
chr13:26120263-26120538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
128, 17
               

               
Conread position:
               
708-937
               

               
Cow position:
               
chr13:8402151-8401923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 136
               

               
Conread position:
               
708-968
               

               
Cow position:
               
chr13:50750961-50751224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
112, 129
               

               
Conread position:
               
708-999
               

               
Cow position:
               
chr13:14967125-14967410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
112, 66
               

               
Conread position:
               
708-1003
               

               
Cow position:
               
chr13:16203762-16203466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 77
               

               
Conread position:
               
708-1006
               

               
Cow position:
               
chr13:56034766-56035059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
140, 75
               

               
Conread position:
               
710-943
               

               
Cow position:
               
chr13:51901683-51901446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
79, 193
               

               
Conread position:
               
710-1006
               

               
Cow position:
               
chr13:52477555-52477847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
76, 128
               

               
Conread position:
               
713-886
               

               
Cow position:
               
chr13:20871477-20871301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
713-916
               

               
Cow position:
               
chr13:48862008-48862208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
97, 123
               

               
Conread position:
               
713-951
               

               
Cow position:
               
chr13:20679427-20679189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
106, 63
               

               
Conread position:
               
713-1003
               

               
Cow position:
               
chr13:28291413-28291121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 125
               

               
Conread position:
               
713-1007
               

               
Cow position:
               
chr13:20473594-20473878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 80
               

               
Conread position:
               
715-1006
               

               
Cow position:
               
chr13:19610478-19610766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
6, 28
               

               
Conread position:
               
716-1008
               

               
Cow position:
               
chr13:20137909-20137613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
109, 76
               

               
Conread position:
               
721-885
               

               
Cow position:
               
chr13:7149308-7149138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 39
               

               
Conread position:
               
723-951
               

               
Cow position:
               
chr13:38872874-38873092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
96, 69
               

               
Conread position:
               
723-1003
               

               
Cow position:
               
chr13:19778771-19779054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
97, 59
               

               
Conread position:
               
724-1007
               

               
Cow position:
               
chr13:20868679-20868949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 35
               

               
Conread position:
               
727-949
               

               
Cow position:
               
chr13:9981767-9981987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
92, 111
               

               
Conread position:
               
727-1006
               

               
Cow position:
               
chr13:21170604-21170326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
16, 10
               

               
Conread position:
               
731-1003
               

               
Cow position:
               
chr13:15757190-15756917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
88, 44
               

               
Conread position:
               
733-917
               

               
Cow position:
               
chr13:29123373-29123190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 61
               

               
Conread position:
               
737-1006
               

               
Cow position:
               
chr13:20314555-20314827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 101
               

               
Conread position:
               
737-1006
               

               
Cow position:
               
chr13:62008176-62007905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
46, 110
               

               
Conread position:
               
740-1006
               

               
Cow position:
               
chr13:18197546-18197810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
213, 96
               

               
Conread position:
               
741-1006
               

               
Cow position:
               
chr13:11103131-11103410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
73, 102
               

               
Conread position:
               
742-926
               

               
Cow position:
               
chr13:18181714-18181898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
77, 101
               

               
Conread position:
               
742-1006
               

               
Cow position:
               
chr13:35557046-35557313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
37, 99
               

               
Conread position:
               
743-981
               

               
Cow position:
               
chr13:52057618-52057381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 63
               

               
Conread position:
               
751-949
               

               
Cow position:
               
chr13:15460724-15460918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 58
               

               
Conread position:
               
756-1008
               

               
Cow position:
               
chr13:17611505-17611755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
63, 86
               

               
Conread position:
               
759-1003
               

               
Cow position:
               
chr13:28440493-28440732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
759-1006
               

               
Cow position:
               
chr13:55494478-55494721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
759-1007
               

               
Cow position:
               
chr13:21171530-21171775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 29
               

               
Conread position:
               
774-1007
               

               
Cow position:
               
chr13:45439548-45439329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
794-1006
               

               
Cow position:
               
chr13:2776297-2776082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
798-1007
               

               
Cow position:
               
chr13:56535460-56535264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
804-1003
               

               
Cow position:
               
chr13:8450329-8450134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
804-1006
               

               
Cow position:
               
chr13:37614191-37614400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 129
               

               
Conread position:
               
808-1007
               

               
Cow position:
               
chr13:33854690-33854884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
147, 33
               

               
Conread position:
               
820-1006
               

               
Cow position:
               
chr13:53850806-53850618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr13:37554894-37555073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
841-1007
               

               
Cow position:
               
chr13:55775322-55775162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
845-1006
               

               
Cow position:
               
chr13:28081680-28081514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 84
               

               
Conread position:
               
858-1003
               

               
Cow position:
               
chr13:23478847-23478701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
69, 96
               

               
Conread position:
               
858-1006
               

               
Cow position:
               
chr13:43342513-43342365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
97, 53
               
Show alignments to all cow chromosomes.