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Cow genome map

           
Conread name:
           
Ss1.1-Lym2-sn70_D11.f.5
        

               
Conread position:
               
94-937
               

               
Cow position:
               
chr15:16909242-16908405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
845
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
725, 673
               

               
Conread position:
               
626-917
               

               
Cow position:
               
chr15:29340343-29340051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
634-951
               

               
Cow position:
               
chr15:39621615-39621296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 25
               

               
Conread position:
               
651-958
               

               
Cow position:
               
chr15:16616457-16616142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 96
               

               
Conread position:
               
651-1003
               

               
Cow position:
               
chr15:26903452-26903097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 210
               

               
Conread position:
               
655-952
               

               
Cow position:
               
chr15:38883402-38883106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 161
               

               
Conread position:
               
656-834
               

               
Cow position:
               
chr15:20725364-20725544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 125
               

               
Conread position:
               
656-937
               

               
Cow position:
               
chr15:4093684-4093963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
163, 118
               

               
Conread position:
               
656-1007
               

               
Cow position:
               
chr15:11011357-11011693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
160, 16
               

               
Conread position:
               
659-864
               

               
Cow position:
               
chr15:36782082-36782282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
94, 103
               

               
Conread position:
               
659-952
               

               
Cow position:
               
chr15:42415504-42415211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
41, 138
               

               
Conread position:
               
659-959
               

               
Cow position:
               
chr15:20352075-20351779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
160, 49
               

               
Conread position:
               
659-1006
               

               
Cow position:
               
chr15:22553295-22553640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
659-1007
               

               
Cow position:
               
chr15:225561-225903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
659-1008
               

               
Cow position:
               
chr15:24616819-24616466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
41, 136
               

               
Conread position:
               
660-889
               

               
Cow position:
               
chr15:24044854-24045083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
149, 90
               

               
Conread position:
               
660-951
               

               
Cow position:
               
chr15:13554597-13554312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
49, 14
               

               
Conread position:
               
660-952
               

               
Cow position:
               
chr15:33625196-33624911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
660-979
               

               
Cow position:
               
chr15:18671207-18671525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
14, 6
               

               
Conread position:
               
660-994
               

               
Cow position:
               
chr15:23180682-23180358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 93
               

               
Conread position:
               
660-1003
               

               
Cow position:
               
chr15:14576578-14576234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
125, 16
               

               
Conread position:
               
661-994
               

               
Cow position:
               
chr15:21832181-21832527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
42, 185
               

               
Conread position:
               
661-1003
               

               
Cow position:
               
chr15:39599685-39599353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
276, 121
               

               
Conread position:
               
664-830
               

               
Cow position:
               
chr15:23927224-23927398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
664-834
               

               
Cow position:
               
chr15:13684026-13684196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
155, 112
               

               
Conread position:
               
664-885
               

               
Cow position:
               
chr15:6462256-6462475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
35, 130
               

               
Conread position:
               
664-887
               

               
Cow position:
               
chr15:10737503-10737724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 91
               

               
Conread position:
               
664-897
               

               
Cow position:
               
chr15:37931519-37931749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
14, 147
               

               
Conread position:
               
664-898
               

               
Cow position:
               
chr15:35417379-35417616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
15, 125
               

               
Conread position:
               
664-899
               

               
Cow position:
               
chr15:4535153-4534919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
17, 159
               

               
Conread position:
               
664-901
               

               
Cow position:
               
chr15:47279894-47280135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 124
               

               
Conread position:
               
664-917
               

               
Cow position:
               
chr15:26117751-26117514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
155, 85
               

               
Conread position:
               
664-944
               

               
Cow position:
               
chr15:1297983-1297702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
664-951
               

               
Cow position:
               
chr15:42788908-42789188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
17, 57
               

               
Conread position:
               
664-953
               

               
Cow position:
               
chr15:51898473-51898180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
17, 131
               

               
Conread position:
               
664-1001
               

               
Cow position:
               
chr15:33306352-33306026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
10, 100
               

               
Conread position:
               
664-1001
               

               
Cow position:
               
chr15:43626712-43626371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
12, 122
               

               
Conread position:
               
664-1003
               

               
Cow position:
               
chr15:245016-244686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
155, 8
               

               
Conread position:
               
664-1003
               

               
Cow position:
               
chr15:16261553-16261234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
134, 19
               

               
Conread position:
               
664-1006
               

               
Cow position:
               
chr15:10245765-10246094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
157, 28
               

               
Conread position:
               
664-1006
               

               
Cow position:
               
chr15:20391036-20391376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 33
               

               
Conread position:
               
664-1006
               

               
Cow position:
               
chr15:22938531-22938866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
664-1006
               

               
Cow position:
               
chr15:24797567-24797902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
26, 122
               

               
Conread position:
               
664-1006
               

               
Cow position:
               
chr15:24994281-24994610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 9
               

               
Conread position:
               
664-1006
               

               
Cow position:
               
chr15:28924523-28924861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
664-1006
               

               
Cow position:
               
chr15:30986043-30986385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
17, 63
               

               
Conread position:
               
664-1006
               

               
Cow position:
               
chr15:42143096-42142774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
664-1007
               

               
Cow position:
               
chr15:10088561-10088219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
10, 119
               

               
Conread position:
               
664-1007
               

               
Cow position:
               
chr15:19771377-19771037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
12, 99
               

               
Conread position:
               
664-1007
               

               
Cow position:
               
chr15:20534204-20534553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
665-834
               

               
Cow position:
               
chr15:23703014-23702851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
151, 114
               

               
Conread position:
               
665-898
               

               
Cow position:
               
chr15:9970736-9970969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
125, 176
               

               
Conread position:
               
665-925
               

               
Cow position:
               
chr15:47822050-47821798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
665-1006
               

               
Cow position:
               
chr15:29810354-29810026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
154, 39
               

               
Conread position:
               
666-951
               

               
Cow position:
               
chr15:16583467-16583732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
666-1006
               

               
Cow position:
               
chr15:2968577-2968235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 61
               

               
Conread position:
               
666-1007
               

               
Cow position:
               
chr15:4418162-4418502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
33, 118
               

               
Conread position:
               
667-1006
               

               
Cow position:
               
chr15:45179-45525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
669-936
               

               
Cow position:
               
chr15:2144895-2145166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 149
               

               
Conread position:
               
670-1003
               

               
Cow position:
               
chr15:5420651-5420978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
116, 21
               

               
Conread position:
               
671-790
               

               
Cow position:
               
chr15:41583144-41583025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
671-817
               

               
Cow position:
               
chr15:21523021-21522876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 112
               

               
Conread position:
               
671-818
               

               
Cow position:
               
chr15:23486935-23487079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
671-834
               

               
Cow position:
               
chr15:15707877-15708042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
671-855
               

               
Cow position:
               
chr15:38103660-38103833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
148, 20
               

               
Conread position:
               
671-869
               

               
Cow position:
               
chr15:9871180-9871376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
110, 125
               

               
Conread position:
               
671-870
               

               
Cow position:
               
chr15:38877073-38877267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
148, 42
               

               
Conread position:
               
671-878
               

               
Cow position:
               
chr15:5632912-5632710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 39
               

               
Conread position:
               
671-882
               

               
Cow position:
               
chr15:21908169-21907960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
106, 113
               

               
Conread position:
               
671-885
               

               
Cow position:
               
chr15:10512037-10512250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
91, 67
               

               
Conread position:
               
671-888
               

               
Cow position:
               
chr15:41619953-41620171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 115
               

               
Conread position:
               
671-891
               

               
Cow position:
               
chr15:5535991-5535775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
28, 48
               

               
Conread position:
               
671-899
               

               
Cow position:
               
chr15:23768029-23768249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 90
               

               
Conread position:
               
671-930
               

               
Cow position:
               
chr15:37205278-37205025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
148, 92
               

               
Conread position:
               
671-930
               

               
Cow position:
               
chr15:49258096-49257841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
106, 80
               

               
Conread position:
               
671-932
               

               
Cow position:
               
chr15:53045645-53045902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
147, 42
               

               
Conread position:
               
671-933
               

               
Cow position:
               
chr15:16307646-16307396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 81
               

               
Conread position:
               
671-943
               

               
Cow position:
               
chr15:33976455-33976729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
85, 117
               

               
Conread position:
               
671-949
               

               
Cow position:
               
chr15:20422545-20422821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
39, 167
               

               
Conread position:
               
671-950
               

               
Cow position:
               
chr15:5726558-5726280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 122
               

               
Conread position:
               
671-951
               

               
Cow position:
               
chr15:10335990-10335712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
254, 165
               

               
Conread position:
               
671-951
               

               
Cow position:
               
chr15:21388934-21389205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
33, 112
               

               
Conread position:
               
671-951
               

               
Cow position:
               
chr15:34206955-34207231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 170
               

               
Conread position:
               
671-951
               

               
Cow position:
               
chr15:50302417-50302142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
148, 101
               

               
Conread position:
               
671-952
               

               
Cow position:
               
chr15:20486979-20487246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
671-952
               

               
Cow position:
               
chr15:40999835-41000112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
127, 118
               

               
Conread position:
               
671-954
               

               
Cow position:
               
chr15:14505659-14505387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
671-954
               

               
Cow position:
               
chr15:20081990-20081726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
148, 78
               

               
Conread position:
               
671-969
               

               
Cow position:
               
chr15:363257-362961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
91, 66
               

               
Conread position:
               
671-980
               

               
Cow position:
               
chr15:23115077-23114758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
671-992
               

               
Cow position:
               
chr15:11560278-11560603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
33, 106
               

               
Conread position:
               
671-994
               

               
Cow position:
               
chr15:38806265-38806592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
33, 116
               

               
Conread position:
               
671-998
               

               
Cow position:
               
chr15:1804098-1804424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
28, 128
               

               
Conread position:
               
671-998
               

               
Cow position:
               
chr15:5234770-5235082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
284, 79
               

               
Conread position:
               
671-998
               

               
Cow position:
               
chr15:45479240-45478908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 77
               

               
Conread position:
               
671-1001
               

               
Cow position:
               
chr15:23275768-23275439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
148, 46
               

               
Conread position:
               
671-1001
               

               
Cow position:
               
chr15:33643323-33642996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
107, 62
               

               
Conread position:
               
671-1002
               

               
Cow position:
               
chr15:794783-795112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
110, 51
               

               
Conread position:
               
671-1002
               

               
Cow position:
               
chr15:21582685-21583022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
671-1003
               

               
Cow position:
               
chr15:6970216-6969891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
117, 64
               

               
Conread position:
               
671-1003
               

               
Cow position:
               
chr15:8354277-8353945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 166
               

               
Conread position:
               
671-1003
               

               
Cow position:
               
chr15:20370223-20370548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
97, 123
               

               
Conread position:
               
671-1003
               

               
Cow position:
               
chr15:32323971-32324304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
21, 97
               

               
Conread position:
               
671-1003
               

               
Cow position:
               
chr15:35112644-35112969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
35, 126
               

               
Conread position:
               
671-1003
               

               
Cow position:
               
chr15:43827540-43827868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
157, 103
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr15:275877-275544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
150, 62
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr15:1083142-1083469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
104, 123
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr15:1722617-1722940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr15:11658335-11658682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
107, 168
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr15:11995792-11996127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
33, 123
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr15:12723321-12722985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 112
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr15:14870976-14870656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 62
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr15:16543224-16543537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
148, 63
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr15:16823171-16822851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
148, 166
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr15:17100476-17100803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
38, 123
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr15:20459066-20459410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
31, 127
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr15:21421177-21420848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 116
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr15:23572445-23572788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 148
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr15:23798290-23798621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr15:25208535-25208858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
145, 55
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr15:26919044-26919368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
148, 33
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr15:35642254-35641913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
30, 113
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr15:36259369-36259696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 112
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr15:37381861-37381530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
28, 110
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr15:39598476-39598146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
148, 96
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr15:45245313-45245640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr15:46563260-46563576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
671-1007
               

               
Cow position:
               
chr15:286712-286372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
114, 35
               

               
Conread position:
               
671-1007
               

               
Cow position:
               
chr15:608380-608043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
34, 106
               

               
Conread position:
               
671-1007
               

               
Cow position:
               
chr15:36888057-36887739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
288, 66
               

               
Conread position:
               
671-1007
               

               
Cow position:
               
chr15:41125337-41125657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
139, 110
               

               
Conread position:
               
671-1007
               

               
Cow position:
               
chr15:47843877-47844188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
671-1007
               

               
Cow position:
               
chr15:49922374-49922035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 126
               

               
Conread position:
               
671-1008
               

               
Cow position:
               
chr15:26896481-26896800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
266, 56
               

               
Conread position:
               
672-942
               

               
Cow position:
               
chr15:15881164-15880889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
29, 140
               

               
Conread position:
               
672-944
               

               
Cow position:
               
chr15:10456780-10457050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
147, 129
               

               
Conread position:
               
672-998
               

               
Cow position:
               
chr15:32979805-32980125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 103
               

               
Conread position:
               
672-998
               

               
Cow position:
               
chr15:43913855-43914189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 107
               

               
Conread position:
               
672-1000
               

               
Cow position:
               
chr15:51427590-51427919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
672-1001
               

               
Cow position:
               
chr15:26079131-26079440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
146, 60
               

               
Conread position:
               
672-1002
               

               
Cow position:
               
chr15:27900276-27900600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
32, 70
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr15:4138366-4138035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
42, 36
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr15:7456930-7456618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr15:12304874-12304540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
102, 166
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr15:16667270-16667597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 62
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr15:22532470-22532154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 110
               

               
Conread position:
               
672-1007
               

               
Cow position:
               
chr15:16018267-16017933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
164, 43
               

               
Conread position:
               
675-826
               

               
Cow position:
               
chr15:6586487-6586637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
144, 77
               

               
Conread position:
               
675-893
               

               
Cow position:
               
chr15:9526243-9526464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
29, 122
               

               
Conread position:
               
675-898
               

               
Cow position:
               
chr15:45323016-45322789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
675-899
               

               
Cow position:
               
chr15:13515598-13515374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
144, 162
               

               
Conread position:
               
675-909
               

               
Cow position:
               
chr15:41360734-41360952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
675-917
               

               
Cow position:
               
chr15:26404504-26404273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
144, 66
               

               
Conread position:
               
675-947
               

               
Cow position:
               
chr15:19186389-19186651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 103
               

               
Conread position:
               
675-951
               

               
Cow position:
               
chr15:52611539-52611261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
107, 125
               

               
Conread position:
               
675-954
               

               
Cow position:
               
chr15:46868482-46868760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
111, 163
               

               
Conread position:
               
675-969
               

               
Cow position:
               
chr15:36773468-36773750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 109
               

               
Conread position:
               
675-978
               

               
Cow position:
               
chr15:9107266-9106970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 108
               

               
Conread position:
               
675-998
               

               
Cow position:
               
chr15:5444211-5443890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 49
               

               
Conread position:
               
675-1000
               

               
Cow position:
               
chr15:43030795-43031119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
29, 100
               

               
Conread position:
               
675-1002
               

               
Cow position:
               
chr15:1329873-1330204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
144, 118
               

               
Conread position:
               
675-1002
               

               
Cow position:
               
chr15:23696681-23696997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
144, 118
               

               
Conread position:
               
675-1003
               

               
Cow position:
               
chr15:3700056-3700379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
112, 158
               

               
Conread position:
               
675-1003
               

               
Cow position:
               
chr15:31857818-31857493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
145, 107
               

               
Conread position:
               
675-1003
               

               
Cow position:
               
chr15:53036739-53037058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
675-1006
               

               
Cow position:
               
chr15:85019-85345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
29, 114
               

               
Conread position:
               
675-1006
               

               
Cow position:
               
chr15:20472319-20472643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 47
               

               
Conread position:
               
675-1006
               

               
Cow position:
               
chr15:21894011-21893681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
99, 163
               

               
Conread position:
               
675-1006
               

               
Cow position:
               
chr15:30001915-30001597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
29, 97
               

               
Conread position:
               
675-1006
               

               
Cow position:
               
chr15:34896992-34896662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
85, 66
               

               
Conread position:
               
675-1007
               

               
Cow position:
               
chr15:8007211-8006878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 91
               

               
Conread position:
               
675-1007
               

               
Cow position:
               
chr15:17233423-17233086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
25, 115
               

               
Conread position:
               
675-1008
               

               
Cow position:
               
chr15:11559125-11559453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
34, 99
               

               
Conread position:
               
678-831
               

               
Cow position:
               
chr15:40009424-40009579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
678-891
               

               
Cow position:
               
chr15:50322822-50322610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
141, 114
               

               
Conread position:
               
678-898
               

               
Cow position:
               
chr15:13387306-13387086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
105, 132
               

               
Conread position:
               
678-909
               

               
Cow position:
               
chr15:3726345-3726122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
678-909
               

               
Cow position:
               
chr15:24128252-24128029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
100, 50
               

               
Conread position:
               
678-943
               

               
Cow position:
               
chr15:6530622-6530882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
104, 37
               

               
Conread position:
               
678-943
               

               
Cow position:
               
chr15:29331230-29330972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
678-979
               

               
Cow position:
               
chr15:38036712-38037020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
26, 101
               

               
Conread position:
               
678-991
               

               
Cow position:
               
chr15:17337585-17337285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
141, 103
               

               
Conread position:
               
678-998
               

               
Cow position:
               
chr15:17763134-17762817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
87, 152
               

               
Conread position:
               
678-998
               

               
Cow position:
               
chr15:22930113-22930441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
21, 144
               

               
Conread position:
               
678-998
               

               
Cow position:
               
chr15:36353895-36353578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 72
               

               
Conread position:
               
678-1000
               

               
Cow position:
               
chr15:16604049-16603736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
678-1001
               

               
Cow position:
               
chr15:10608079-10608403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
141, 104
               

               
Conread position:
               
678-1006
               

               
Cow position:
               
chr15:1503131-1502814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
678-1006
               

               
Cow position:
               
chr15:2380583-2380266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
105, 123
               

               
Conread position:
               
678-1006
               

               
Cow position:
               
chr15:22939098-22939423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
141, 88
               

               
Conread position:
               
678-1006
               

               
Cow position:
               
chr15:49274178-49273863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
141, 104
               

               
Conread position:
               
678-1006
               

               
Cow position:
               
chr15:53716659-53716335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 72
               

               
Conread position:
               
678-1007
               

               
Cow position:
               
chr15:4178710-4179039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
110, 81
               

               
Conread position:
               
678-1007
               

               
Cow position:
               
chr15:16112628-16112294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
678-1008
               

               
Cow position:
               
chr15:7307926-7308259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
679-899
               

               
Cow position:
               
chr15:16640006-16639785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
127, 71
               

               
Conread position:
               
679-1003
               

               
Cow position:
               
chr15:27972989-27973302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 118
               

               
Conread position:
               
679-1003
               

               
Cow position:
               
chr15:40957803-40957482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
96, 54
               

               
Conread position:
               
679-1007
               

               
Cow position:
               
chr15:1857953-1857626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
37, 96
               

               
Conread position:
               
679-1008
               

               
Cow position:
               
chr15:11987183-11987510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 105
               

               
Conread position:
               
680-904
               

               
Cow position:
               
chr15:18720535-18720314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
680-923
               

               
Cow position:
               
chr15:17870061-17870300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
139, 93
               

               
Conread position:
               
680-926
               

               
Cow position:
               
chr15:5730165-5729922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
139, 29
               

               
Conread position:
               
680-964
               

               
Cow position:
               
chr15:12655690-12655973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
122, 61
               

               
Conread position:
               
680-1006
               

               
Cow position:
               
chr15:31137240-31137564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
20, 103
               

               
Conread position:
               
680-1007
               

               
Cow position:
               
chr15:38162231-38161900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
94, 61
               

               
Conread position:
               
681-1003
               

               
Cow position:
               
chr15:8578902-8579233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
19, 96
               

               
Conread position:
               
681-1006
               

               
Cow position:
               
chr15:30047319-30047653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
104, 124
               

               
Conread position:
               
682-1000
               

               
Cow position:
               
chr15:2952906-2953226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
20, 54
               

               
Conread position:
               
682-1003
               

               
Cow position:
               
chr15:24804566-24804896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 60
               

               
Conread position:
               
682-1006
               

               
Cow position:
               
chr15:36435429-36435103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
24, 101
               

               
Conread position:
               
683-992
               

               
Cow position:
               
chr15:23865846-23866157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
683-998
               

               
Cow position:
               
chr15:33285103-33284785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 91
               

               
Conread position:
               
683-999
               

               
Cow position:
               
chr15:44658579-44658274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
26, 102
               

               
Conread position:
               
683-1007
               

               
Cow position:
               
chr15:6226968-6227276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
90, 75
               

               
Conread position:
               
684-988
               

               
Cow position:
               
chr15:31949217-31948922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 101
               

               
Conread position:
               
684-1000
               

               
Cow position:
               
chr15:53164240-53163927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
25, 49
               

               
Conread position:
               
684-1001
               

               
Cow position:
               
chr15:1056078-1055756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 91
               

               
Conread position:
               
685-1007
               

               
Cow position:
               
chr15:30470750-30471079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 124
               

               
Conread position:
               
686-791
               

               
Cow position:
               
chr15:36724961-36725068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
686-951
               

               
Cow position:
               
chr15:26573597-26573338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
686-1003
               

               
Cow position:
               
chr15:662250-662560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
64, 22
               

               
Conread position:
               
688-1003
               

               
Cow position:
               
chr15:51307463-51307766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
131, 149
               

               
Conread position:
               
690-899
               

               
Cow position:
               
chr15:39326297-39326509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 154
               

               
Conread position:
               
697-1003
               

               
Cow position:
               
chr15:5717917-5717623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
698-1000
               

               
Cow position:
               
chr15:12785630-12785336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
122, 65
               

               
Conread position:
               
698-1006
               

               
Cow position:
               
chr15:5158581-5158272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
87, 73
               

               
Conread position:
               
699-926
               

               
Cow position:
               
chr15:35425607-35425828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 84
               

               
Conread position:
               
699-951
               

               
Cow position:
               
chr15:35204943-35205195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
113, 101
               

               
Conread position:
               
699-1006
               

               
Cow position:
               
chr15:47042429-47042742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
120, 14
               

               
Conread position:
               
700-999
               

               
Cow position:
               
chr15:6232811-6233107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
120, 93
               

               
Conread position:
               
700-1003
               

               
Cow position:
               
chr15:31928694-31928994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
119, 58
               

               
Conread position:
               
700-1006
               

               
Cow position:
               
chr15:24967993-24967702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
84, 50
               

               
Conread position:
               
701-1003
               

               
Cow position:
               
chr15:6905738-6905443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 92
               

               
Conread position:
               
704-1003
               

               
Cow position:
               
chr15:4918866-4919166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
191, 116
               

               
Conread position:
               
707-1006
               

               
Cow position:
               
chr15:49784093-49784380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
112, 42
               

               
Conread position:
               
708-999
               

               
Cow position:
               
chr15:34284215-34284502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
111, 42
               

               
Conread position:
               
708-1003
               

               
Cow position:
               
chr15:14888444-14888733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
70, 131
               

               
Conread position:
               
708-1006
               

               
Cow position:
               
chr15:8665395-8665706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
51, 112
               

               
Conread position:
               
709-997
               

               
Cow position:
               
chr15:19807522-19807813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
117, 65
               

               
Conread position:
               
710-1006
               

               
Cow position:
               
chr15:14474532-14474241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
111, 40
               

               
Conread position:
               
711-1003
               

               
Cow position:
               
chr15:10400076-10400371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 71
               

               
Conread position:
               
713-944
               

               
Cow position:
               
chr15:35440884-35441113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 128
               

               
Conread position:
               
713-1003
               

               
Cow position:
               
chr15:9465869-9465578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
75, 45
               

               
Conread position:
               
713-1003
               

               
Cow position:
               
chr15:25907109-25906822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
714-1003
               

               
Cow position:
               
chr15:28047564-28047857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
106, 73
               

               
Conread position:
               
723-951
               

               
Cow position:
               
chr15:21821170-21820949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
91, 114
               

               
Conread position:
               
723-999
               

               
Cow position:
               
chr15:5719626-5719897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 71
               

               
Conread position:
               
723-1001
               

               
Cow position:
               
chr15:37865551-37865265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
53, 92
               

               
Conread position:
               
726-1003
               

               
Cow position:
               
chr15:50552350-50552630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
728-895
               

               
Cow position:
               
chr15:18647554-18647392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
49, 110
               

               
Conread position:
               
729-991
               

               
Cow position:
               
chr15:28038955-28038704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 110
               

               
Conread position:
               
732-1006
               

               
Cow position:
               
chr15:10442331-10442610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
50, 82
               

               
Conread position:
               
733-1007
               

               
Cow position:
               
chr15:13432665-13432382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
737-1003
               

               
Cow position:
               
chr15:41056037-41056305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
82, 33
               

               
Conread position:
               
737-1007
               

               
Cow position:
               
chr15:14988157-14987895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 21
               

               
Conread position:
               
739-952
               

               
Cow position:
               
chr15:14176334-14176542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
743-944
               

               
Cow position:
               
chr15:26718759-26718957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
743-982
               

               
Cow position:
               
chr15:12203712-12203471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 50
               

               
Conread position:
               
744-946
               

               
Cow position:
               
chr15:37284616-37284414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
54, 20
               

               
Conread position:
               
744-1006
               

               
Cow position:
               
chr15:49132208-49131960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
745-1003
               

               
Cow position:
               
chr15:25571648-25571908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
81, 58
               

               
Conread position:
               
747-991
               

               
Cow position:
               
chr15:4694903-4694663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 90
               

               
Conread position:
               
750-936
               

               
Cow position:
               
chr15:44237573-44237389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
69, 48
               

               
Conread position:
               
750-995
               

               
Cow position:
               
chr15:13395705-13395460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
750-1006
               

               
Cow position:
               
chr15:38827170-38827414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 38
               

               
Conread position:
               
754-952
               

               
Cow position:
               
chr15:34751236-34751044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 29
               

               
Conread position:
               
755-1003
               

               
Cow position:
               
chr15:52317208-52316964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 44
               

               
Conread position:
               
768-1007
               

               
Cow position:
               
chr15:40835251-40835015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
774-1007
               

               
Cow position:
               
chr15:21903281-21903507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
775-1006
               

               
Cow position:
               
chr15:50333113-50332876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 70
               

               
Conread position:
               
794-1003
               

               
Cow position:
               
chr15:27063408-27063613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
27, 48
               

               
Conread position:
               
794-1006
               

               
Cow position:
               
chr15:9879264-9879479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
797-1006
               

               
Cow position:
               
chr15:11908841-11909046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
797-1006
               

               
Cow position:
               
chr15:26442325-26442115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
24, 45
               

               
Conread position:
               
804-1003
               

               
Cow position:
               
chr15:14964066-14964256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
808-1007
               

               
Cow position:
               
chr15:2931467-2931671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 63
               

               
Conread position:
               
819-1006
               

               
Cow position:
               
chr15:36422699-36422519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
820-1006
               

               
Cow position:
               
chr15:34223952-34223768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
136, 22
               

               
Conread position:
               
821-1007
               

               
Cow position:
               
chr15:49483713-49483526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
133, 16
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr15:28099196-28099013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
133, 15
               

               
Conread position:
               
836-1003
               

               
Cow position:
               
chr15:46283846-46284012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
119, 98
               

               
Conread position:
               
841-1002
               

               
Cow position:
               
chr15:46059428-46059261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
103, 88
               

               
Conread position:
               
841-1003
               

               
Cow position:
               
chr15:20566978-20566821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
114, 16
               

               
Conread position:
               
842-1006
               

               
Cow position:
               
chr15:40844554-40844720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
861-1007
               

               
Cow position:
               
chr15:53005893-53006035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               
Show alignments to all cow chromosomes.