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Cow genome map

           
Conread name:
           
Ss1.1-Lym2-sn70_D11.f.5
        

               
Conread position:
               
639-1006
               

               
Cow position:
               
chr23:1655714-1656085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
11, 163
               

               
Conread position:
               
647-1003
               

               
Cow position:
               
chr23:5451158-5451510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 150
               

               
Conread position:
               
651-907
               

               
Cow position:
               
chr23:39806705-39806961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
651-1006
               

               
Cow position:
               
chr23:26841278-26841613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
137, 62
               

               
Conread position:
               
655-946
               

               
Cow position:
               
chr23:1742196-1742482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 140
               

               
Conread position:
               
657-884
               

               
Cow position:
               
chr23:25358577-25358792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 66
               

               
Conread position:
               
657-952
               

               
Cow position:
               
chr23:4966663-4966953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
15, 10
               

               
Conread position:
               
657-1006
               

               
Cow position:
               
chr23:9734257-9734611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
44, 119
               

               
Conread position:
               
658-944
               

               
Cow position:
               
chr23:4104244-4104522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 111
               

               
Conread position:
               
658-1003
               

               
Cow position:
               
chr23:10852890-10853235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
22, 143
               

               
Conread position:
               
658-1006
               

               
Cow position:
               
chr23:4726629-4726983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
18, 187
               

               
Conread position:
               
659-825
               

               
Cow position:
               
chr23:24809820-24809652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
659-955
               

               
Cow position:
               
chr23:13599190-13599480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
660-898
               

               
Cow position:
               
chr23:33940307-33940075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
150, 9
               

               
Conread position:
               
660-902
               

               
Cow position:
               
chr23:1647463-1647703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 135
               

               
Conread position:
               
660-932
               

               
Cow position:
               
chr23:26050880-26051155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
11, 177
               

               
Conread position:
               
660-1006
               

               
Cow position:
               
chr23:16583074-16582716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
15, 135
               

               
Conread position:
               
660-1006
               

               
Cow position:
               
chr23:35239190-35239542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
661-932
               

               
Cow position:
               
chr23:27544676-27544943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
158, 115
               

               
Conread position:
               
663-944
               

               
Cow position:
               
chr23:24867156-24867434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
127, 10
               

               
Conread position:
               
664-869
               

               
Cow position:
               
chr23:2055556-2055758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
149, 112
               

               
Conread position:
               
664-870
               

               
Cow position:
               
chr23:20057018-20056812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
12, 176
               

               
Conread position:
               
664-891
               

               
Cow position:
               
chr23:4529033-4528801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 103
               

               
Conread position:
               
664-899
               

               
Cow position:
               
chr23:3262645-3262414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 8
               

               
Conread position:
               
664-899
               

               
Cow position:
               
chr23:18402439-18402206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
45, 128
               

               
Conread position:
               
664-926
               

               
Cow position:
               
chr23:35938192-35938456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
89, 63
               

               
Conread position:
               
664-937
               

               
Cow position:
               
chr23:29459240-29458979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
15, 56
               

               
Conread position:
               
664-953
               

               
Cow position:
               
chr23:21764766-21765057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 224
               

               
Conread position:
               
664-1006
               

               
Cow position:
               
chr23:20195069-20194739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
665-1003
               

               
Cow position:
               
chr23:39778256-39778585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
7, 61
               

               
Conread position:
               
666-1006
               

               
Cow position:
               
chr23:1536174-1536511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 81
               

               
Conread position:
               
669-1007
               

               
Cow position:
               
chr23:12363763-12363427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 120
               

               
Conread position:
               
670-886
               

               
Cow position:
               
chr23:3409048-3408840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
110, 56
               

               
Conread position:
               
671-850
               

               
Cow position:
               
chr23:16664709-16664535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 58
               

               
Conread position:
               
671-873
               

               
Cow position:
               
chr23:3918241-3918037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
25, 163
               

               
Conread position:
               
671-887
               

               
Cow position:
               
chr23:36309278-36309492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
671-890
               

               
Cow position:
               
chr23:6367466-6367685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
671-891
               

               
Cow position:
               
chr23:16563698-16563914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
148, 102
               

               
Conread position:
               
671-897
               

               
Cow position:
               
chr23:24984313-24984087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
671-898
               

               
Cow position:
               
chr23:1767687-1767911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
671-898
               

               
Cow position:
               
chr23:10014396-10014612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
671-899
               

               
Cow position:
               
chr23:35177177-35177402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
671-905
               

               
Cow position:
               
chr23:4980688-4980457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
147, 122
               

               
Conread position:
               
671-905
               

               
Cow position:
               
chr23:25378511-25378736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
38, 112
               

               
Conread position:
               
671-917
               

               
Cow position:
               
chr23:17404696-17404940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
148, 118
               

               
Conread position:
               
671-922
               

               
Cow position:
               
chr23:22399262-22399512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
110, 73
               

               
Conread position:
               
671-926
               

               
Cow position:
               
chr23:7360974-7361218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
148, 111
               

               
Conread position:
               
671-932
               

               
Cow position:
               
chr23:6592846-6592592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 115
               

               
Conread position:
               
671-932
               

               
Cow position:
               
chr23:11045343-11045603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
115, 129
               

               
Conread position:
               
671-932
               

               
Cow position:
               
chr23:19774631-19774885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
671-932
               

               
Cow position:
               
chr23:40891218-40891479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
118, 19
               

               
Conread position:
               
671-933
               

               
Cow position:
               
chr23:11473647-11473387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
114, 41
               

               
Conread position:
               
671-937
               

               
Cow position:
               
chr23:16700185-16699922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 109
               

               
Conread position:
               
671-944
               

               
Cow position:
               
chr23:2488124-2487864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 42
               

               
Conread position:
               
671-944
               

               
Cow position:
               
chr23:6995121-6994856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
163, 46
               

               
Conread position:
               
671-946
               

               
Cow position:
               
chr23:10554151-10553878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
671-950
               

               
Cow position:
               
chr23:1776772-1776505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
148, 76
               

               
Conread position:
               
671-951
               

               
Cow position:
               
chr23:1700771-1701024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
671-951
               

               
Cow position:
               
chr23:1923979-1923700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
148, 111
               

               
Conread position:
               
671-951
               

               
Cow position:
               
chr23:21502780-21502497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 66
               

               
Conread position:
               
671-951
               

               
Cow position:
               
chr23:29034174-29034448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
142, 166
               

               
Conread position:
               
671-951
               

               
Cow position:
               
chr23:33717683-33717405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
103, 124
               

               
Conread position:
               
671-954
               

               
Cow position:
               
chr23:14164544-14164260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
61, 126
               

               
Conread position:
               
671-968
               

               
Cow position:
               
chr23:5540019-5540298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
147, 36
               

               
Conread position:
               
671-999
               

               
Cow position:
               
chr23:3282258-3281926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
148, 70
               

               
Conread position:
               
671-999
               

               
Cow position:
               
chr23:33711619-33711946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
149, 113
               

               
Conread position:
               
671-1001
               

               
Cow position:
               
chr23:9599353-9599674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
122, 78
               

               
Conread position:
               
671-1001
               

               
Cow position:
               
chr23:26632660-26632986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
93, 108
               

               
Conread position:
               
671-1001
               

               
Cow position:
               
chr23:34416418-34416750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
33, 108
               

               
Conread position:
               
671-1002
               

               
Cow position:
               
chr23:2501996-2501670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 78
               

               
Conread position:
               
671-1003
               

               
Cow position:
               
chr23:8698304-8698613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
148, 53
               

               
Conread position:
               
671-1003
               

               
Cow position:
               
chr23:18416191-18415869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 123
               

               
Conread position:
               
671-1003
               

               
Cow position:
               
chr23:29345899-29345589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
148, 65
               

               
Conread position:
               
671-1004
               

               
Cow position:
               
chr23:39752975-39753291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
148, 77
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr23:187035-187370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
149, 100
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr23:534086-534417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 42
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr23:3247442-3247780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
110, 139
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr23:5426288-5426628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 166
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr23:5436787-5436449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr23:7845150-7845479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 105
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr23:12334066-12334413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr23:15742949-15743282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
115, 92
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr23:20248839-20248503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 113
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr23:20744734-20744391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
107, 72
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr23:24509559-24509875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
148, 102
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr23:25864830-25864503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
163, 62
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr23:26949056-26949382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
32, 116
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr23:26986414-26986081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 80
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr23:37065698-37066047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
30, 173
               

               
Conread position:
               
671-1007
               

               
Cow position:
               
chr23:12091502-12091168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
32, 104
               

               
Conread position:
               
671-1007
               

               
Cow position:
               
chr23:18902190-18901874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
117, 110
               

               
Conread position:
               
671-1007
               

               
Cow position:
               
chr23:22804581-22804914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
44, 107
               

               
Conread position:
               
671-1007
               

               
Cow position:
               
chr23:29242807-29243124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
38, 88
               

               
Conread position:
               
671-1007
               

               
Cow position:
               
chr23:33569996-33570323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
671-1008
               

               
Cow position:
               
chr23:349870-349528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 169
               

               
Conread position:
               
672-877
               

               
Cow position:
               
chr23:1489909-1490102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
672-887
               

               
Cow position:
               
chr23:1921369-1921155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 106
               

               
Conread position:
               
672-888
               

               
Cow position:
               
chr23:21659801-21660016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
54, 153
               

               
Conread position:
               
672-899
               

               
Cow position:
               
chr23:4329823-4329591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 171
               

               
Conread position:
               
672-982
               

               
Cow position:
               
chr23:3727540-3727216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 153
               

               
Conread position:
               
672-998
               

               
Cow position:
               
chr23:10829724-10829396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
32, 73
               

               
Conread position:
               
672-998
               

               
Cow position:
               
chr23:29786492-29786160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
32, 106
               

               
Conread position:
               
672-1000
               

               
Cow position:
               
chr23:29521331-29521659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
106, 51
               

               
Conread position:
               
672-1003
               

               
Cow position:
               
chr23:22496707-22496370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr23:4646375-4646698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
116, 55
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr23:8837830-8837499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr23:30585800-30585458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr23:31601596-31601259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
32, 124
               

               
Conread position:
               
672-1007
               

               
Cow position:
               
chr23:3967693-3967361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
147, 54
               

               
Conread position:
               
675-767
               

               
Cow position:
               
chr23:221931-222022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
675-833
               

               
Cow position:
               
chr23:14191414-14191573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
675-834
               

               
Cow position:
               
chr23:15056781-15056622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
144, 154
               

               
Conread position:
               
675-898
               

               
Cow position:
               
chr23:20996327-20996542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
144, 22
               

               
Conread position:
               
675-899
               

               
Cow position:
               
chr23:19371209-19370991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
144, 112
               

               
Conread position:
               
675-944
               

               
Cow position:
               
chr23:1428673-1428936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
143, 75
               

               
Conread position:
               
675-948
               

               
Cow position:
               
chr23:5706861-5707124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
146, 49
               

               
Conread position:
               
675-950
               

               
Cow position:
               
chr23:18296668-18296940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
24, 121
               

               
Conread position:
               
675-951
               

               
Cow position:
               
chr23:38455321-38455044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 120
               

               
Conread position:
               
675-1000
               

               
Cow position:
               
chr23:3394632-3394315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
144, 57
               

               
Conread position:
               
675-1003
               

               
Cow position:
               
chr23:39049562-39049252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
108, 58
               

               
Conread position:
               
675-1006
               

               
Cow position:
               
chr23:5617437-5617766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
24, 115
               

               
Conread position:
               
675-1006
               

               
Cow position:
               
chr23:20557990-20557651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
27, 123
               

               
Conread position:
               
675-1006
               

               
Cow position:
               
chr23:39813366-39813693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
148, 33
               

               
Conread position:
               
675-1007
               

               
Cow position:
               
chr23:2282313-2281996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 108
               

               
Conread position:
               
677-1006
               

               
Cow position:
               
chr23:32480173-32479826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
678-817
               

               
Cow position:
               
chr23:9132579-9132444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
106, 45
               

               
Conread position:
               
678-898
               

               
Cow position:
               
chr23:14838876-14838662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
678-932
               

               
Cow position:
               
chr23:1721120-1720866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
62, 94
               

               
Conread position:
               
678-944
               

               
Cow position:
               
chr23:30950824-30951082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
141, 52
               

               
Conread position:
               
678-951
               

               
Cow position:
               
chr23:11380389-11380116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 104
               

               
Conread position:
               
678-1001
               

               
Cow position:
               
chr23:6244719-6244416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
678-1006
               

               
Cow position:
               
chr23:1290160-1290497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
125, 65
               

               
Conread position:
               
678-1006
               

               
Cow position:
               
chr23:5437134-5436810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
678-1006
               

               
Cow position:
               
chr23:16881298-16880979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 103
               

               
Conread position:
               
678-1007
               

               
Cow position:
               
chr23:1583395-1583709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 37
               

               
Conread position:
               
678-1007
               

               
Cow position:
               
chr23:18802409-18802075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
26, 118
               

               
Conread position:
               
678-1007
               

               
Cow position:
               
chr23:24704145-24704475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
31, 110
               

               
Conread position:
               
679-941
               

               
Cow position:
               
chr23:4959699-4959448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
232, 102
               

               
Conread position:
               
679-949
               

               
Cow position:
               
chr23:9268458-9268711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
140, 91
               

               
Conread position:
               
679-1001
               

               
Cow position:
               
chr23:21452866-21452546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
102, 119
               

               
Conread position:
               
680-892
               

               
Cow position:
               
chr23:1634551-1634758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
136, 94
               

               
Conread position:
               
680-899
               

               
Cow position:
               
chr23:23409605-23409816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 97
               

               
Conread position:
               
680-904
               

               
Cow position:
               
chr23:2417319-2417544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
680-1003
               

               
Cow position:
               
chr23:1883260-1883581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 68
               

               
Conread position:
               
680-1006
               

               
Cow position:
               
chr23:1337435-1337116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 102
               

               
Conread position:
               
680-1007
               

               
Cow position:
               
chr23:29626281-29626618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
106, 149
               

               
Conread position:
               
681-1000
               

               
Cow position:
               
chr23:468593-468279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
681-1007
               

               
Cow position:
               
chr23:31493739-31494059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
138, 43
               

               
Conread position:
               
681-1008
               

               
Cow position:
               
chr23:5732417-5732730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
138, 162
               

               
Conread position:
               
682-934
               

               
Cow position:
               
chr23:40844521-40844768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
682-951
               

               
Cow position:
               
chr23:3434042-3433781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
137, 81
               

               
Conread position:
               
682-1003
               

               
Cow position:
               
chr23:19221784-19221453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
18, 120
               

               
Conread position:
               
682-1006
               

               
Cow position:
               
chr23:13520318-13520635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
24, 95
               

               
Conread position:
               
684-884
               

               
Cow position:
               
chr23:28945194-28945000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
137, 90
               

               
Conread position:
               
684-1001
               

               
Cow position:
               
chr23:18286068-18286369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
102, 42
               

               
Conread position:
               
684-1006
               

               
Cow position:
               
chr23:11081128-11081449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
685-863
               

               
Cow position:
               
chr23:2801813-2801635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 45
               

               
Conread position:
               
685-1003
               

               
Cow position:
               
chr23:29801303-29801623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 108
               

               
Conread position:
               
686-952
               

               
Cow position:
               
chr23:16076287-16076032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
133, 33
               

               
Conread position:
               
686-1006
               

               
Cow position:
               
chr23:3890694-3890381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
20, 81
               

               
Conread position:
               
689-1007
               

               
Cow position:
               
chr23:5795353-5795668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 148
               

               
Conread position:
               
692-1003
               

               
Cow position:
               
chr23:40789856-40790153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
96, 60
               

               
Conread position:
               
692-1006
               

               
Cow position:
               
chr23:1438175-1438469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
115, 29
               

               
Conread position:
               
692-1006
               

               
Cow position:
               
chr23:9226152-9226465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
11, 159
               

               
Conread position:
               
695-979
               

               
Cow position:
               
chr23:16797929-16797639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
5, 123
               

               
Conread position:
               
695-1000
               

               
Cow position:
               
chr23:24966577-24966276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 54
               

               
Conread position:
               
697-1006
               

               
Cow position:
               
chr23:307341-307649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
698-899
               

               
Cow position:
               
chr23:21446004-21446200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
121, 90
               

               
Conread position:
               
698-1006
               

               
Cow position:
               
chr23:3245031-3244724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
76, 100
               

               
Conread position:
               
698-1007
               

               
Cow position:
               
chr23:34356528-34356833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
121, 89
               

               
Conread position:
               
700-1003
               

               
Cow position:
               
chr23:11212392-11212692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
119, 137
               

               
Conread position:
               
700-1006
               

               
Cow position:
               
chr23:40348755-40348455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
102, 40
               

               
Conread position:
               
701-951
               

               
Cow position:
               
chr23:39780644-39780890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
118, 18
               

               
Conread position:
               
705-1006
               

               
Cow position:
               
chr23:1222348-1222050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 134
               

               
Conread position:
               
707-931
               

               
Cow position:
               
chr23:1876604-1876827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
112, 76
               

               
Conread position:
               
708-944
               

               
Cow position:
               
chr23:39275784-39276023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
73, 51
               

               
Conread position:
               
709-952
               

               
Cow position:
               
chr23:1701066-1701308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 73
               

               
Conread position:
               
709-1006
               

               
Cow position:
               
chr23:24685147-24685431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
110, 66
               

               
Conread position:
               
710-1008
               

               
Cow position:
               
chr23:15280602-15280302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
124, 104
               

               
Conread position:
               
713-922
               

               
Cow position:
               
chr23:11845175-11845382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
713-951
               

               
Cow position:
               
chr23:38208625-38208860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
106, 69
               

               
Conread position:
               
722-923
               

               
Cow position:
               
chr23:1403896-1403698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
97, 59
               

               
Conread position:
               
722-1007
               

               
Cow position:
               
chr23:385404-385116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
40, 117
               

               
Conread position:
               
723-979
               

               
Cow position:
               
chr23:18036748-18036491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
101, 70
               

               
Conread position:
               
723-1007
               

               
Cow position:
               
chr23:35149658-35149944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 35
               

               
Conread position:
               
726-1002
               

               
Cow position:
               
chr23:20539295-20539566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 117
               

               
Conread position:
               
727-1002
               

               
Cow position:
               
chr23:3293605-3293876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
59, 117
               

               
Conread position:
               
728-999
               

               
Cow position:
               
chr23:17486912-17486643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
59, 73
               

               
Conread position:
               
728-1007
               

               
Cow position:
               
chr23:10416504-10416236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
729-1003
               

               
Cow position:
               
chr23:38264618-38264341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
730-926
               

               
Cow position:
               
chr23:5237512-5237309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
59, 12
               

               
Conread position:
               
730-998
               

               
Cow position:
               
chr23:18238610-18238341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
104, 57
               

               
Conread position:
               
731-951
               

               
Cow position:
               
chr23:21440084-21439867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
50, 107
               

               
Conread position:
               
732-909
               

               
Cow position:
               
chr23:4470582-4470406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
737-1007
               

               
Cow position:
               
chr23:5881595-5881329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
741-1006
               

               
Cow position:
               
chr23:18749138-18748885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 101
               

               
Conread position:
               
743-1002
               

               
Cow position:
               
chr23:16961225-16961473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
43, 60
               

               
Conread position:
               
745-1003
               

               
Cow position:
               
chr23:35965074-35965337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
37, 56
               

               
Conread position:
               
746-942
               

               
Cow position:
               
chr23:349018-348823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
747-1006
               

               
Cow position:
               
chr23:1981721-1981482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
750-1006
               

               
Cow position:
               
chr23:40275608-40275366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 45
               

               
Conread position:
               
755-892
               

               
Cow position:
               
chr23:5400607-5400745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
66, 49
               

               
Conread position:
               
755-950
               

               
Cow position:
               
chr23:35369104-35368910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 38
               

               
Conread position:
               
755-1006
               

               
Cow position:
               
chr23:39330348-39330103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
66, 39
               

               
Conread position:
               
755-1008
               

               
Cow position:
               
chr23:13202420-13202178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
764-1001
               

               
Cow position:
               
chr23:2160685-2160456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
30, 75
               

               
Conread position:
               
769-1007
               

               
Cow position:
               
chr23:25990483-25990246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 73
               

               
Conread position:
               
771-1007
               

               
Cow position:
               
chr23:20093286-20093052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
49, 67
               

               
Conread position:
               
787-1003
               

               
Cow position:
               
chr23:22586852-22587066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 52
               

               
Conread position:
               
804-1001
               

               
Cow position:
               
chr23:1194503-1194309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
804-1006
               

               
Cow position:
               
chr23:17597415-17597613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
804-1006
               

               
Cow position:
               
chr23:22668516-22668321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
804-1006
               

               
Cow position:
               
chr23:40501109-40500906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
804-1007
               

               
Cow position:
               
chr23:1877907-1877705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
805-1006
               

               
Cow position:
               
chr23:22238832-22238629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
807-1006
               

               
Cow position:
               
chr23:5395484-5395292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
811-1006
               

               
Cow position:
               
chr23:27848992-27849184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
8, 31
               

               
Conread position:
               
819-1006
               

               
Cow position:
               
chr23:9131956-9131773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
136, 22
               

               
Conread position:
               
820-1006
               

               
Cow position:
               
chr23:7155687-7155510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
117, 21
               

               
Conread position:
               
820-1006
               

               
Cow position:
               
chr23:24809432-24809246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 21
               

               
Conread position:
               
828-1007
               

               
Cow position:
               
chr23:5686183-5686004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
127, 13
               

               
Conread position:
               
841-1006
               

               
Cow position:
               
chr23:23104461-23104299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 13
               

               
Conread position:
               
843-1006
               

               
Cow position:
               
chr23:21638404-21638564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 81
               
Show alignments to all cow chromosomes.