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Cow genome map

           
Conread name:
           
Ss1.1-Lym2-sn70_D11.f.5
        

               
Conread position:
               
644-899
               

               
Cow position:
               
chr24:32370116-32369858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
8, 145
               

               
Conread position:
               
655-952
               

               
Cow position:
               
chr24:28327268-28326974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
126, 17
               

               
Conread position:
               
657-1006
               

               
Cow position:
               
chr24:27220279-27219924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
18, 138
               

               
Conread position:
               
658-1006
               

               
Cow position:
               
chr24:27844707-27844369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
17, 35
               

               
Conread position:
               
658-1006
               

               
Cow position:
               
chr24:40129941-40130300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
659-1006
               

               
Cow position:
               
chr24:31812006-31812349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 93
               

               
Conread position:
               
659-1006
               

               
Cow position:
               
chr24:37945817-37945482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
13, 139
               

               
Conread position:
               
660-887
               

               
Cow position:
               
chr24:32054477-32054706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
16, 124
               

               
Conread position:
               
660-951
               

               
Cow position:
               
chr24:14648530-14648252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
16, 7
               

               
Conread position:
               
660-952
               

               
Cow position:
               
chr24:18017046-18017335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 130
               

               
Conread position:
               
660-1007
               

               
Cow position:
               
chr24:17407211-17407556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 66
               

               
Conread position:
               
661-781
               

               
Cow position:
               
chr24:17938583-17938702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
662-789
               

               
Cow position:
               
chr24:3631330-3631457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
662-923
               

               
Cow position:
               
chr24:33724023-33723764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
126, 46
               

               
Conread position:
               
664-842
               

               
Cow position:
               
chr24:885864-885687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
664-891
               

               
Cow position:
               
chr24:6149847-6150072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
664-899
               

               
Cow position:
               
chr24:43432616-43432847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
45, 119
               

               
Conread position:
               
664-917
               

               
Cow position:
               
chr24:201812-201562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
664-949
               

               
Cow position:
               
chr24:6102645-6102932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
14, 91
               

               
Conread position:
               
664-949
               

               
Cow position:
               
chr24:18331550-18331825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
155, 10
               

               
Conread position:
               
664-950
               

               
Cow position:
               
chr24:32204971-32204689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
8, 129
               

               
Conread position:
               
664-951
               

               
Cow position:
               
chr24:18970686-18970400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
12, 127
               

               
Conread position:
               
664-952
               

               
Cow position:
               
chr24:31159439-31159723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
12, 130
               

               
Conread position:
               
664-952
               

               
Cow position:
               
chr24:33153601-33153885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
155, 70
               

               
Conread position:
               
664-979
               

               
Cow position:
               
chr24:28990388-28990699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
155, 69
               

               
Conread position:
               
664-1003
               

               
Cow position:
               
chr24:43371069-43371404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 117
               

               
Conread position:
               
664-1006
               

               
Cow position:
               
chr24:25194095-25194430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
77, 10
               

               
Conread position:
               
664-1006
               

               
Cow position:
               
chr24:28303530-28303198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 33
               

               
Conread position:
               
664-1007
               

               
Cow position:
               
chr24:18485177-18484828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
14, 186
               

               
Conread position:
               
665-951
               

               
Cow position:
               
chr24:27290693-27290980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
41, 88
               

               
Conread position:
               
665-978
               

               
Cow position:
               
chr24:43200451-43200142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
141, 62
               

               
Conread position:
               
665-1006
               

               
Cow position:
               
chr24:6450324-6450673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
667-1003
               

               
Cow position:
               
chr24:15057222-15057545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 115
               

               
Conread position:
               
669-1006
               

               
Cow position:
               
chr24:17311380-17311065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
150, 23
               

               
Conread position:
               
670-1006
               

               
Cow position:
               
chr24:39143438-39143776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
37, 107
               

               
Conread position:
               
671-835
               

               
Cow position:
               
chr24:29027875-29028035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
116, 102
               

               
Conread position:
               
671-876
               

               
Cow position:
               
chr24:6487754-6487950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
148, 56
               

               
Conread position:
               
671-879
               

               
Cow position:
               
chr24:20024442-20024650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
39, 108
               

               
Conread position:
               
671-886
               

               
Cow position:
               
chr24:36404313-36404098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
148, 166
               

               
Conread position:
               
671-887
               

               
Cow position:
               
chr24:16895605-16895392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
148, 92
               

               
Conread position:
               
671-887
               

               
Cow position:
               
chr24:33222111-33221895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
148, 166
               

               
Conread position:
               
671-893
               

               
Cow position:
               
chr24:27341189-27340968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
28, 51
               

               
Conread position:
               
671-895
               

               
Cow position:
               
chr24:29180719-29180939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
148, 165
               

               
Conread position:
               
671-898
               

               
Cow position:
               
chr24:19769324-19769545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
671-907
               

               
Cow position:
               
chr24:15707612-15707380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
29, 115
               

               
Conread position:
               
671-926
               

               
Cow position:
               
chr24:43927491-43927249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
142, 59
               

               
Conread position:
               
671-927
               

               
Cow position:
               
chr24:27748478-27748725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
148, 70
               

               
Conread position:
               
671-930
               

               
Cow position:
               
chr24:29673350-29673609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
31, 167
               

               
Conread position:
               
671-931
               

               
Cow position:
               
chr24:24250559-24250812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
256, 112
               

               
Conread position:
               
671-931
               

               
Cow position:
               
chr24:30897707-30897449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
148, 166
               

               
Conread position:
               
671-932
               

               
Cow position:
               
chr24:34396343-34396089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
100, 124
               

               
Conread position:
               
671-936
               

               
Cow position:
               
chr24:43364190-43364451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
30, 82
               

               
Conread position:
               
671-943
               

               
Cow position:
               
chr24:23187086-23186817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
148, 53
               

               
Conread position:
               
671-948
               

               
Cow position:
               
chr24:24457415-24457147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
38, 87
               

               
Conread position:
               
671-948
               

               
Cow position:
               
chr24:32070797-32071063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
67, 113
               

               
Conread position:
               
671-949
               

               
Cow position:
               
chr24:34008747-34008468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
28, 169
               

               
Conread position:
               
671-951
               

               
Cow position:
               
chr24:29679476-29679204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
132, 37
               

               
Conread position:
               
671-952
               

               
Cow position:
               
chr24:17294361-17294090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 117
               

               
Conread position:
               
671-979
               

               
Cow position:
               
chr24:29781995-29782301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 120
               

               
Conread position:
               
671-979
               

               
Cow position:
               
chr24:35576704-35576398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
671-981
               

               
Cow position:
               
chr24:20874511-20874819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 166
               

               
Conread position:
               
671-981
               

               
Cow position:
               
chr24:31359157-31359457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
148, 61
               

               
Conread position:
               
671-994
               

               
Cow position:
               
chr24:38347513-38347828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
33, 106
               

               
Conread position:
               
671-1001
               

               
Cow position:
               
chr24:11886992-11887312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 44
               

               
Conread position:
               
671-1001
               

               
Cow position:
               
chr24:18357222-18356897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 52
               

               
Conread position:
               
671-1001
               

               
Cow position:
               
chr24:28496752-28496423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
116, 92
               

               
Conread position:
               
671-1001
               

               
Cow position:
               
chr24:44041182-44040852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 169
               

               
Conread position:
               
671-1002
               

               
Cow position:
               
chr24:1269629-1269937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 57
               

               
Conread position:
               
671-1002
               

               
Cow position:
               
chr24:39483308-39483623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
148, 105
               

               
Conread position:
               
671-1003
               

               
Cow position:
               
chr24:3165652-3165980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
109, 42
               

               
Conread position:
               
671-1003
               

               
Cow position:
               
chr24:27906269-27906599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
38, 53
               

               
Conread position:
               
671-1003
               

               
Cow position:
               
chr24:28553716-28553411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
671-1003
               

               
Cow position:
               
chr24:31816420-31816736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
111, 14
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr24:3493723-3494045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
150, 64
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr24:5141775-5142102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr24:11840009-11840348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 128
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr24:15861770-15861427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 261
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr24:16994717-16995042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr24:17104739-17104408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
148, 18
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr24:18474914-18474565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
99, 186
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr24:18732292-18731944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
66, 190
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr24:19800677-19801003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr24:23695062-23694747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
213, 62
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr24:28721722-28722041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
169, 116
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr24:29595980-29595636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
25, 113
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr24:41980838-41980496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
37, 174
               

               
Conread position:
               
671-1006
               

               
Cow position:
               
chr24:42825663-42825351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
671-1007
               

               
Cow position:
               
chr24:16089067-16089394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
142, 78
               

               
Conread position:
               
671-1007
               

               
Cow position:
               
chr24:18374609-18374929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
148, 90
               

               
Conread position:
               
671-1007
               

               
Cow position:
               
chr24:28062783-28063115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 92
               

               
Conread position:
               
671-1007
               

               
Cow position:
               
chr24:33944235-33944571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
148, 46
               

               
Conread position:
               
672-834
               

               
Cow position:
               
chr24:39219011-39218847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 124
               

               
Conread position:
               
672-884
               

               
Cow position:
               
chr24:39842017-39841807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
106, 167
               

               
Conread position:
               
672-951
               

               
Cow position:
               
chr24:15373241-15373514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
672-979
               

               
Cow position:
               
chr24:42345173-42344857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
32, 148
               

               
Conread position:
               
672-1003
               

               
Cow position:
               
chr24:33098660-33098311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 187
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr24:6132041-6131723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
110, 77
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr24:10499046-10499382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 57
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr24:18999879-19000207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 88
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr24:19179615-19179272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 137
               

               
Conread position:
               
672-1006
               

               
Cow position:
               
chr24:27608266-27607947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
110, 52
               

               
Conread position:
               
672-1007
               

               
Cow position:
               
chr24:2402542-2402212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 115
               

               
Conread position:
               
673-969
               

               
Cow position:
               
chr24:27726180-27725884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
112, 15
               

               
Conread position:
               
674-1006
               

               
Cow position:
               
chr24:44987549-44987208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
30, 174
               

               
Conread position:
               
675-884
               

               
Cow position:
               
chr24:3430569-3430775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
144, 15
               

               
Conread position:
               
675-888
               

               
Cow position:
               
chr24:14171859-14171644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 176
               

               
Conread position:
               
675-891
               

               
Cow position:
               
chr24:31324116-31324334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
53, 171
               

               
Conread position:
               
675-926
               

               
Cow position:
               
chr24:2096054-2095798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
98, 32
               

               
Conread position:
               
675-931
               

               
Cow position:
               
chr24:29063813-29063570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
675-952
               

               
Cow position:
               
chr24:20250065-20249784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 121
               

               
Conread position:
               
675-979
               

               
Cow position:
               
chr24:26554766-26554457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
675-1000
               

               
Cow position:
               
chr24:7913837-7914167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
31, 125
               

               
Conread position:
               
675-1001
               

               
Cow position:
               
chr24:352770-352445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
98, 113
               

               
Conread position:
               
675-1002
               

               
Cow position:
               
chr24:17860420-17860102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
106, 53
               

               
Conread position:
               
675-1003
               

               
Cow position:
               
chr24:18343884-18344227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
29, 173
               

               
Conread position:
               
675-1003
               

               
Cow position:
               
chr24:30235708-30236033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
107, 52
               

               
Conread position:
               
675-1006
               

               
Cow position:
               
chr24:37650505-37650839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
65, 121
               

               
Conread position:
               
675-1006
               

               
Cow position:
               
chr24:38814803-38815138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
675-1007
               

               
Cow position:
               
chr24:16509805-16510136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
35, 108
               

               
Conread position:
               
677-979
               

               
Cow position:
               
chr24:20943004-20943297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
144, 120
               

               
Conread position:
               
678-875
               

               
Cow position:
               
chr24:39833674-39833482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
141, 97
               

               
Conread position:
               
678-925
               

               
Cow position:
               
chr24:19736489-19736250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
124, 10
               

               
Conread position:
               
678-932
               

               
Cow position:
               
chr24:15246796-15246552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
105, 33
               

               
Conread position:
               
678-938
               

               
Cow position:
               
chr24:5754676-5754929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
135, 71
               

               
Conread position:
               
678-946
               

               
Cow position:
               
chr24:33230515-33230776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
678-970
               

               
Cow position:
               
chr24:17955605-17955324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
21, 109
               

               
Conread position:
               
678-998
               

               
Cow position:
               
chr24:24491172-24490869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
104, 70
               

               
Conread position:
               
678-998
               

               
Cow position:
               
chr24:35332556-35332884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 97
               

               
Conread position:
               
678-1000
               

               
Cow position:
               
chr24:37037737-37038049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
678-1003
               

               
Cow position:
               
chr24:36008321-36008647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 99
               

               
Conread position:
               
678-1006
               

               
Cow position:
               
chr24:211823-212134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
100, 122
               

               
Conread position:
               
678-1006
               

               
Cow position:
               
chr24:40300997-40301324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
135, 121
               

               
Conread position:
               
678-1007
               

               
Cow position:
               
chr24:30314194-30313864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 92
               

               
Conread position:
               
679-834
               

               
Cow position:
               
chr24:35794897-35794742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 64
               

               
Conread position:
               
680-931
               

               
Cow position:
               
chr24:18975040-18975298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
20, 234
               

               
Conread position:
               
680-1003
               

               
Cow position:
               
chr24:7476513-7476189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 103
               

               
Conread position:
               
680-1003
               

               
Cow position:
               
chr24:22689742-22689412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 102
               

               
Conread position:
               
680-1006
               

               
Cow position:
               
chr24:29586833-29587164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
22, 117
               

               
Conread position:
               
682-834
               

               
Cow position:
               
chr24:4615677-4615527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
137, 81
               

               
Conread position:
               
682-1006
               

               
Cow position:
               
chr24:41423451-41423760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
167, 103
               

               
Conread position:
               
684-944
               

               
Cow position:
               
chr24:11119128-11119377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 99
               

               
Conread position:
               
684-1001
               

               
Cow position:
               
chr24:22225025-22225350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
16, 100
               

               
Conread position:
               
684-1003
               

               
Cow position:
               
chr24:18741727-18741404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 97
               

               
Conread position:
               
684-1006
               

               
Cow position:
               
chr24:26929101-26928777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
22, 105
               

               
Conread position:
               
684-1006
               

               
Cow position:
               
chr24:27630247-27630563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
136, 99
               

               
Conread position:
               
685-923
               

               
Cow position:
               
chr24:43967656-43967423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
134, 152
               

               
Conread position:
               
685-1002
               

               
Cow position:
               
chr24:4724818-4725119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 92
               

               
Conread position:
               
685-1007
               

               
Cow position:
               
chr24:25885316-25884983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
101, 154
               

               
Conread position:
               
686-1006
               

               
Cow position:
               
chr24:17285148-17284819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
686-1006
               

               
Cow position:
               
chr24:34742601-34742913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
133, 53
               

               
Conread position:
               
689-887
               

               
Cow position:
               
chr24:2675171-2675360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
689-926
               

               
Cow position:
               
chr24:41755712-41755946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
130, 85
               

               
Conread position:
               
689-1006
               

               
Cow position:
               
chr24:35675394-35675695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
128, 74
               

               
Conread position:
               
690-931
               

               
Cow position:
               
chr24:24662279-24662042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
131, 33
               

               
Conread position:
               
692-979
               

               
Cow position:
               
chr24:16645471-16645181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 119
               

               
Conread position:
               
692-1003
               

               
Cow position:
               
chr24:18281783-18281474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
14, 104
               

               
Conread position:
               
697-951
               

               
Cow position:
               
chr24:8006168-8006413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
122, 66
               

               
Conread position:
               
698-891
               

               
Cow position:
               
chr24:30545001-30544817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
698-932
               

               
Cow position:
               
chr24:29170828-29171051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
121, 33
               

               
Conread position:
               
698-973
               

               
Cow position:
               
chr24:19466063-19465784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
104, 84
               

               
Conread position:
               
698-1006
               

               
Cow position:
               
chr24:42103235-42103525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
121, 15
               

               
Conread position:
               
698-1007
               

               
Cow position:
               
chr24:28233907-28234206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
121, 65
               

               
Conread position:
               
699-1004
               

               
Cow position:
               
chr24:389960-390262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
78, 64
               

               
Conread position:
               
700-979
               

               
Cow position:
               
chr24:10242921-10242643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
121, 50
               

               
Conread position:
               
704-1006
               

               
Cow position:
               
chr24:34272676-34272983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 62
               

               
Conread position:
               
707-1006
               

               
Cow position:
               
chr24:29606176-29605869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
708-1006
               

               
Cow position:
               
chr24:27713536-27713246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
111, 28
               

               
Conread position:
               
710-954
               

               
Cow position:
               
chr24:14457853-14457616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
710-998
               

               
Cow position:
               
chr24:23863764-23863470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
116, 62
               

               
Conread position:
               
710-1006
               

               
Cow position:
               
chr24:33372434-33372710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
109, 41
               

               
Conread position:
               
713-1006
               

               
Cow position:
               
chr24:29561701-29561415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
69, 37
               

               
Conread position:
               
714-949
               

               
Cow position:
               
chr24:35150396-35150623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
133, 66
               

               
Conread position:
               
714-1001
               

               
Cow position:
               
chr24:39523573-39523291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
105, 68
               

               
Conread position:
               
714-1007
               

               
Cow position:
               
chr24:13626159-13626451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
107, 51
               

               
Conread position:
               
715-949
               

               
Cow position:
               
chr24:39791414-39791645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
66, 85
               

               
Conread position:
               
716-1006
               

               
Cow position:
               
chr24:43028450-43028164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
103, 33
               

               
Conread position:
               
719-1006
               

               
Cow position:
               
chr24:37267540-37267829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
123, 84
               

               
Conread position:
               
723-1006
               

               
Cow position:
               
chr24:28060724-28061024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
57, 124
               

               
Conread position:
               
724-1006
               

               
Cow position:
               
chr24:37975097-37974819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
729-1006
               

               
Cow position:
               
chr24:3656477-3656200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
736-1003
               

               
Cow position:
               
chr24:230172-230441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
83, 224
               

               
Conread position:
               
737-891
               

               
Cow position:
               
chr24:30308660-30308504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
45, 99
               

               
Conread position:
               
741-953
               

               
Cow position:
               
chr24:28042873-28043082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
47, 102
               

               
Conread position:
               
744-1003
               

               
Cow position:
               
chr24:37823432-37823685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
75, 42
               

               
Conread position:
               
750-1007
               

               
Cow position:
               
chr24:27349270-27349010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 96
               

               
Conread position:
               
753-1002
               

               
Cow position:
               
chr24:27284733-27284984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
753-1003
               

               
Cow position:
               
chr24:2992965-2992719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
68, 38
               

               
Conread position:
               
755-1002
               

               
Cow position:
               
chr24:15288735-15288987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
36, 88
               

               
Conread position:
               
759-896
               

               
Cow position:
               
chr24:44145498-44145632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
60, 78
               

               
Conread position:
               
765-1006
               

               
Cow position:
               
chr24:20364487-20364252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
54, 77
               

               
Conread position:
               
780-1006
               

               
Cow position:
               
chr24:18137369-18137136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
789-999
               

               
Cow position:
               
chr24:22133118-22133322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
789-1006
               

               
Cow position:
               
chr24:5360666-5360875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
30, 49
               

               
Conread position:
               
794-1006
               

               
Cow position:
               
chr24:28510749-28510955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 49
               

               
Conread position:
               
795-1006
               

               
Cow position:
               
chr24:21835006-21834799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
796-1006
               

               
Cow position:
               
chr24:29539974-29539766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
159, 45
               

               
Conread position:
               
804-1006
               

               
Cow position:
               
chr24:25122307-25122501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
151, 36
               

               
Conread position:
               
809-1000
               

               
Cow position:
               
chr24:7757739-7757927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
814-1006
               

               
Cow position:
               
chr24:3412655-3412845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
5, 28
               

               
Conread position:
               
816-1006
               

               
Cow position:
               
chr24:6886986-6887170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               
Show alignments to all cow chromosomes.