Cow genome map

Conread name: Ss1.1-MPL-MPL384_8_I21.5

Conread position: 1-203
Cow position: chr11:67138625-67138416 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 1-288
Cow position: chr11:15436737-15437019 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 192
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 155, 91

Conread position: 1-346
Cow position: chr11:37992268-37991916 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 247
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 46, 191

Conread position: 1-346
Cow position: chr11:37995673-37995321 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 46, 191

Conread position: 2-112
Cow position: chr11:41033315-41033425 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-132
Cow position: chr11:5222104-5221974 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-170
Cow position: chr11:8552209-8552383 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 132, 0

Conread position: 2-173
Cow position: chr11:3264241-3264415 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 138, 65

Conread position: 2-180
Cow position: chr11:38735612-38735428 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 2-191
Cow position: chr11:3171156-3171349 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 125, 63

Conread position: 2-218
Cow position: chr11:21478004-21478226 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 134, 0

Conread position: 2-219
Cow position: chr11:54264446-54264669 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 121, 0

Conread position: 2-225
Cow position: chr11:28382077-28382301 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 122, 65

Conread position: 2-228
Cow position: chr11:18105275-18105045 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 127, 40

Conread position: 2-230
Cow position: chr11:56522458-56522226 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 134, 65

Conread position: 2-231
Cow position: chr11:8829384-8829150 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 122, 89

Conread position: 2-233
Cow position: chr11:82330635-82330399 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 123, 114

Conread position: 2-246
Cow position: chr11:2812640-2812891 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 2-247
Cow position: chr11:16632621-16632388 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 131, 49

Conread position: 2-248
Cow position: chr11:8413252-8413504 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 2-248
Cow position: chr11:52656328-52656076 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 132, 0

Conread position: 2-253
Cow position: chr11:50950385-50950644 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 89, 45

Conread position: 2-254
Cow position: chr11:49236565-49236310 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 132, 39

Conread position: 2-255
Cow position: chr11:66020159-66019909 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 12, 0

Conread position: 2-259
Cow position: chr11:2568267-2568531 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 64

Conread position: 2-259
Cow position: chr11:4625352-4625086 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 123, 86

Conread position: 2-259
Cow position: chr11:47869234-47868983 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 183
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 99, 46

Conread position: 2-269
Cow position: chr11:52320110-52320381 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 120, 212

Conread position: 2-277
Cow position: chr11:57004293-57004564 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 207
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 126, 198

Conread position: 2-280
Cow position: chr11:41518333-41518060 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 102

Conread position: 2-284
Cow position: chr11:4060559-4060293 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 140, 0

Conread position: 2-284
Cow position: chr11:23995212-23995504 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 134, 288

Conread position: 2-285
Cow position: chr11:81651561-81651276 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 120, 232

Conread position: 2-288
Cow position: chr11:43644642-43644345 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 2-288
Cow position: chr11:59430678-59430386 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 63, 206

Conread position: 2-289
Cow position: chr11:29585889-29586173 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 123, 65

Conread position: 2-289
Cow position: chr11:40267993-40267695 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 65

Conread position: 2-304
Cow position: chr11:81892807-81892501 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 207
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 58, 66

Conread position: 2-308
Cow position: chr11:49248110-49248406 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 209
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 117, 145

Conread position: 2-319
Cow position: chr11:51289967-51290274 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 213
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 149, 57

Conread position: 2-319
Cow position: chr11:52855209-52855533 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 234
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 77, 65

Conread position: 2-319
Cow position: chr11:80002496-80002821 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 216
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 73, 296

Conread position: 2-325
Cow position: chr11:67294169-67293838 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 229
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 22, 13

Conread position: 2-328
Cow position: chr11:50191751-50191422 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 231
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 257

Conread position: 2-345
Cow position: chr11:38354590-38354918 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 226
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 137, 89

Conread position: 2-346
Cow position: chr11:15290366-15290704 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 231
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 120, 74

Conread position: 2-346
Cow position: chr11:20493362-20493005 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 246
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 134, 173

Conread position: 2-346
Cow position: chr11:21798417-21798762 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 102

Conread position: 2-346
Cow position: chr11:29013848-29014205 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 122, 301

Conread position: 2-346
Cow position: chr11:35252517-35252172 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 237
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 140, 40

Conread position: 2-346
Cow position: chr11:35920311-35919963 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 65

Conread position: 2-346
Cow position: chr11:37433643-37433985 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 137, 47

Conread position: 2-346
Cow position: chr11:44873839-44874186 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 251
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 72, 26

Conread position: 2-346
Cow position: chr11:48169195-48168840 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 240
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 84, 180

Conread position: 2-346
Cow position: chr11:48484661-48484312 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 242
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 67, 112

Conread position: 2-346
Cow position: chr11:50001163-50001508 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 227
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 143, 61

Conread position: 2-346
Cow position: chr11:65694379-65694026 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 246

Conread position: 2-346
Cow position: chr11:68547247-68547599 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 237
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 55, 0

Conread position: 2-346
Cow position: chr11:79132307-79132653 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 140

Conread position: 2-348
Cow position: chr11:15640960-15641310 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 275

Conread position: 2-348
Cow position: chr11:46246906-46247260 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 242
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 123, 26

Conread position: 2-348
Cow position: chr11:53815207-53815561 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 232
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 32, 161

Conread position: 2-348
Cow position: chr11:73326146-73325801 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 237
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 123, 63

Conread position: 2-349
Cow position: chr11:13433361-13433707 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 243
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 94

Conread position: 2-355
Cow position: chr11:75378590-75378945 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 238
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 132, 120

Conread position: 2-370
Cow position: chr11:38599297-38598939 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 20

Conread position: 2-373
Cow position: chr11:21499085-21499456 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 255
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 130, 19

Conread position: 2-388
Cow position: chr11:49550611-49550227 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 271
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 41, 78

Conread position: 2-388
Cow position: chr11:75551619-75551231 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 2-391
Cow position: chr11:16822632-16822252 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 245
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 129, 63

Conread position: 2-391
Cow position: chr11:18890737-18891136 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 273
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 136, 45

Conread position: 2-391
Cow position: chr11:51176976-51177359 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 256
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 16, 155

Conread position: 2-464
Cow position: chr11:30191629-30192101 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 308

Conread position: 2-497
Cow position: chr11:34112716-34113227 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 309

Conread position: 3-117
Cow position: chr11:11534643-11534530 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 3-123
Cow position: chr11:27906739-27906859 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-126
Cow position: chr11:10621973-10621849 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 3-130
Cow position: chr11:17860886-17860760 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 3-131
Cow position: chr11:3796619-3796750 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 3-134
Cow position: chr11:10853859-10853990 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-134
Cow position: chr11:31371074-31371205 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-134
Cow position: chr11:41162232-41162363 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-134
Cow position: chr11:67593029-67593160 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-153
Cow position: chr11:60777866-60777716 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 143, 133

Conread position: 3-153
Cow position: chr11:81604925-81605075 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-166
Cow position: chr11:54302955-54303118 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 143, 133

Conread position: 3-166
Cow position: chr11:54304321-54304484 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 143, 133

Conread position: 3-170
Cow position: chr11:46706023-46705851 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 118, 96

Conread position: 3-185
Cow position: chr11:49631997-49631816 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 143, 18

Conread position: 3-189
Cow position: chr11:43536158-43535973 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 143, 36

Conread position: 3-189
Cow position: chr11:44488418-44488604 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 3-191
Cow position: chr11:75710835-75710647 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 143, 133

Conread position: 3-191
Cow position: chr11:80761882-80761694 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 3-192
Cow position: chr11:30057654-30057844 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 27, 0

Conread position: 3-192
Cow position: chr11:51755461-51755648 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 89, 0

Conread position: 3-198
Cow position: chr11:70601866-70601672 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 61, 34

Conread position: 3-204
Cow position: chr11:36192473-36192674 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 156
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 3-204
Cow position: chr11:41025234-41025435 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 143, 133

Conread position: 3-208
Cow position: chr11:62574582-62574378 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 64, 0

Conread position: 3-210
Cow position: chr11:16757679-16757473 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 176, 115

Conread position: 3-223
Cow position: chr11:21819987-21819763 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 128, 88

Conread position: 3-223
Cow position: chr11:27660655-27660867 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 172
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 64, 0

Conread position: 3-223
Cow position: chr11:48650226-48650459 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 71, 0

Conread position: 3-224
Cow position: chr11:83323070-83323289 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 3-225
Cow position: chr11:34962442-34962657 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 54, 83

Conread position: 3-225
Cow position: chr11:78990794-78990568 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 62, 75

Conread position: 3-233
Cow position: chr11:10100466-10100712 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 71, 149

Conread position: 3-233
Cow position: chr11:23904696-23904930 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 137

Conread position: 3-246
Cow position: chr11:38916765-38917007 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 130, 185

Conread position: 3-246
Cow position: chr11:75256608-75256849 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 99

Conread position: 3-248
Cow position: chr11:11124606-11124848 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 80, 0

Conread position: 3-252
Cow position: chr11:9222269-9222032 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 125, 70

Conread position: 3-253
Cow position: chr11:2282027-2281773 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 125, 29

Conread position: 3-253
Cow position: chr11:9152842-9152587 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 122, 82

Conread position: 3-253
Cow position: chr11:17037115-17036863 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 3-253
Cow position: chr11:19507738-19507985 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 124, 39

Conread position: 3-253
Cow position: chr11:48982532-48982786 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 126, 73

Conread position: 3-254
Cow position: chr11:42003529-42003277 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 23

Conread position: 3-255
Cow position: chr11:10302736-10302486 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 190

Conread position: 3-255
Cow position: chr11:23129077-23128833 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 3-255
Cow position: chr11:30171824-30172085 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 74, 152

Conread position: 3-255
Cow position: chr11:36229963-36229702 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 169, 82

Conread position: 3-255
Cow position: chr11:49935331-49935075 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 125, 153

Conread position: 3-255
Cow position: chr11:62881181-62880922 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 3-259
Cow position: chr11:14942141-14941875 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 61, 18

Conread position: 3-259
Cow position: chr11:30110426-30110678 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 3-259
Cow position: chr11:38794010-38794268 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 131, 89

Conread position: 3-260
Cow position: chr11:33363810-33364074 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 122, 0

Conread position: 3-261
Cow position: chr11:29916017-29916275 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 74

Conread position: 3-267
Cow position: chr11:45647369-45647103 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 3-269
Cow position: chr11:378403-378138 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 69, 75

Conread position: 3-269
Cow position: chr11:10698331-10698065 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-269
Cow position: chr11:39587365-39587630 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 0

Conread position: 3-269
Cow position: chr11:53773084-53773349 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-270
Cow position: chr11:6877291-6877556 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 194

Conread position: 3-270
Cow position: chr11:42358599-42358864 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 72

Conread position: 3-272
Cow position: chr11:19918199-19917940 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 175
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 3-274
Cow position: chr11:5569029-5568762 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 3-274
Cow position: chr11:66897329-66897060 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 74

Conread position: 3-276
Cow position: chr11:4206764-4207040 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 3-279
Cow position: chr11:62238954-62239231 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 43

Conread position: 3-280
Cow position: chr11:52450631-52450354 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-284
Cow position: chr11:5252114-5252400 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 122, 259

Conread position: 3-284
Cow position: chr11:24030207-24030496 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 88, 55

Conread position: 3-284
Cow position: chr11:42232065-42232365 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 3-284
Cow position: chr11:44036185-44036465 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 3-284
Cow position: chr11:59366616-59366333 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 119, 191

Conread position: 3-284
Cow position: chr11:63652231-63651950 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-287
Cow position: chr11:1625748-1625462 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 79

Conread position: 3-287
Cow position: chr11:10758320-10758032 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 122, 253

Conread position: 3-288
Cow position: chr11:1380161-1380448 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 77

Conread position: 3-288
Cow position: chr11:3915559-3915280 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 3-288
Cow position: chr11:4391162-4390891 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-288
Cow position: chr11:9654077-9653795 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 3-288
Cow position: chr11:10154843-10154557 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 191
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 9

Conread position: 3-288
Cow position: chr11:12939483-12939773 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 123, 152

Conread position: 3-288
Cow position: chr11:13061744-13061470 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 3-288
Cow position: chr11:13224633-13224912 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 3-288
Cow position: chr11:21832498-21832213 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 248

Conread position: 3-288
Cow position: chr11:22593326-22593607 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 3-288
Cow position: chr11:23273004-23272722 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 131, 38

Conread position: 3-288
Cow position: chr11:32067554-32067278 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 69

Conread position: 3-288
Cow position: chr11:44915269-44914982 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 45

Conread position: 3-288
Cow position: chr11:48428557-48428848 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 53, 76

Conread position: 3-288
Cow position: chr11:54856106-54856388 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-288
Cow position: chr11:57012038-57012323 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 182
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 119, 127

Conread position: 3-288
Cow position: chr11:64047790-64048074 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 3-288
Cow position: chr11:67744799-67745081 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 81

Conread position: 3-288
Cow position: chr11:67919924-67919640 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 3-288
Cow position: chr11:74991523-74991805 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 0

Conread position: 3-288
Cow position: chr11:80826870-80826590 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-290
Cow position: chr11:21852826-21852527 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 62, 0

Conread position: 3-291
Cow position: chr11:6364850-6364562 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-291
Cow position: chr11:7719092-7718804 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-291
Cow position: chr11:8443573-8443285 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-291
Cow position: chr11:31860343-31860630 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-291
Cow position: chr11:47972450-47972162 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-291
Cow position: chr11:70977974-70977686 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-292
Cow position: chr11:64052907-64052616 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-299
Cow position: chr11:46027870-46028168 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 199
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 121, 27

Conread position: 3-319
Cow position: chr11:18509540-18509224 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 296

Conread position: 3-321
Cow position: chr11:78819572-78819899 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 70

Conread position: 3-322
Cow position: chr11:50236500-50236180 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 0

Conread position: 3-322
Cow position: chr11:77705237-77705553 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 74

Conread position: 3-324
Cow position: chr11:7873629-7873952 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 74

Conread position: 3-324
Cow position: chr11:10076243-10076565 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 0

Conread position: 3-324
Cow position: chr11:13499489-13499804 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 102

Conread position: 3-324
Cow position: chr11:32455472-32455789 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 3-324
Cow position: chr11:37278717-37278410 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 108

Conread position: 3-324
Cow position: chr11:41599275-41598938 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 313

Conread position: 3-324
Cow position: chr11:46195039-46195360 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-324
Cow position: chr11:51034694-51035024 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-324
Cow position: chr11:84774580-84774905 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 283

Conread position: 3-338
Cow position: chr11:8366978-8367307 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 3-342
Cow position: chr11:50267788-50268129 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 42, 104

Conread position: 3-343
Cow position: chr11:15373106-15373446 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 64

Conread position: 3-346
Cow position: chr11:18086873-18086526 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 25

Conread position: 3-346
Cow position: chr11:29003909-29004247 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 131, 64

Conread position: 3-346
Cow position: chr11:35761368-35761025 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 224
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 57

Conread position: 3-346
Cow position: chr11:47662201-47662536 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 165

Conread position: 3-346
Cow position: chr11:53307491-53307145 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 234
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 129, 45

Conread position: 3-346
Cow position: chr11:54134780-54134434 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 30

Conread position: 3-346
Cow position: chr11:54185837-54186184 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 66

Conread position: 3-346
Cow position: chr11:62151410-62151070 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 45

Conread position: 3-346
Cow position: chr11:75254911-75255249 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 244
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 200, 113

Conread position: 3-346
Cow position: chr11:79741142-79740804 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 127, 18

Conread position: 3-347
Cow position: chr11:10991734-10992094 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 3-347
Cow position: chr11:73798288-73797943 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 134

Conread position: 3-348
Cow position: chr11:11315411-11315066 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr11:14287203-14287548 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr11:14297196-14297541 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr11:15286154-15285804 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 160

Conread position: 3-348
Cow position: chr11:16547532-16547187 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr11:17113158-17112813 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-348
Cow position: chr11:18537782-18537437 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr11:22617528-22617183 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr11:27496938-27497283 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr11:28620038-28620383 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr11:33147028-33146683 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr11:35506340-35506688 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 240
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 127, 174

Conread position: 3-348
Cow position: chr11:35541659-35541314 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr11:38819080-38818735 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr11:39078643-39078297 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 134

Conread position: 3-348
Cow position: chr11:39114970-39115307 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 167

Conread position: 3-348
Cow position: chr11:41164212-41163867 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr11:43537072-43536727 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr11:47573118-47572761 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 145

Conread position: 3-348
Cow position: chr11:47595782-47596126 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 0

Conread position: 3-348
Cow position: chr11:48649417-48649774 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 58

Conread position: 3-348
Cow position: chr11:48659148-48659506 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 164

Conread position: 3-348
Cow position: chr11:52179733-52180078 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr11:52846893-52847238 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 64

Conread position: 3-348
Cow position: chr11:61060142-61059797 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr11:62792309-62792649 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr11:71169105-71168764 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 25

Conread position: 3-348
Cow position: chr11:75195726-75195380 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 297

Conread position: 3-349
Cow position: chr11:1473473-1473131 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 253

Conread position: 3-349
Cow position: chr11:11996415-11996075 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 247

Conread position: 3-349
Cow position: chr11:15437445-15437798 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 237
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 9, 27

Conread position: 3-349
Cow position: chr11:17104288-17103942 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-349
Cow position: chr11:19787618-19787960 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 162

Conread position: 3-349
Cow position: chr11:73512953-73512609 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 158

Conread position: 3-356
Cow position: chr11:8233099-8232744 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 134, 85

Conread position: 3-356
Cow position: chr11:18814292-18814636 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 133, 119

Conread position: 3-357
Cow position: chr11:11319170-11318825 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 246
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 122, 16

Conread position: 3-366
Cow position: chr11:69074786-69075137 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 77

Conread position: 3-367
Cow position: chr11:12762780-12762417 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 234

Conread position: 3-368
Cow position: chr11:6343877-6344238 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-369
Cow position: chr11:15988714-15989080 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-369
Cow position: chr11:47655213-47655576 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 107

Conread position: 3-369
Cow position: chr11:63260794-63260427 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-369
Cow position: chr11:73137996-73138355 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 3-370
Cow position: chr11:2350936-2351304 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:2421885-2422252 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:2535107-2535474 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:2772754-2773121 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr11:2800842-2800475 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:3238720-3239085 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 64

Conread position: 3-370
Cow position: chr11:4596985-4597352 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:5279078-5278710 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 0

Conread position: 3-370
Cow position: chr11:9235736-9235379 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 248
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 97, 80

Conread position: 3-370
Cow position: chr11:10043662-10044029 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:10810603-10810236 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:10949003-10948637 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:11876350-11876717 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:13015409-13015042 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr11:13087249-13086885 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 105

Conread position: 3-370
Cow position: chr11:13247650-13247283 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:15836330-15836669 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 143, 83

Conread position: 3-370
Cow position: chr11:16900750-16901100 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 253
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 143, 64

Conread position: 3-370
Cow position: chr11:17078383-17078750 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:17549576-17549943 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr11:18398314-18397947 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:18587278-18586911 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:20285200-20284833 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:20730805-20730443 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 3-370
Cow position: chr11:21472856-21472491 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 3-370
Cow position: chr11:21620848-21621217 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:21929704-21929337 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:23773672-23774039 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 133

Conread position: 3-370
Cow position: chr11:24136616-24136983 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr11:25760162-25760528 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 0

Conread position: 3-370
Cow position: chr11:26254215-26254574 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 92

Conread position: 3-370
Cow position: chr11:26337475-26337109 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 54

Conread position: 3-370
Cow position: chr11:26512216-26511849 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:27447611-27447978 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr11:27724490-27724123 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 134

Conread position: 3-370
Cow position: chr11:27944031-27944398 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:28226360-28225995 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 0

Conread position: 3-370
Cow position: chr11:28349191-28348824 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:29614764-29615131 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:30000079-30000446 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:30088294-30088661 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr11:30199951-30199568 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 249
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 150, 0

Conread position: 3-370
Cow position: chr11:31833843-31833477 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 3-370
Cow position: chr11:32747025-32747392 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr11:32763163-32763530 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:32952793-32953168 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 139

Conread position: 3-370
Cow position: chr11:32973961-32974336 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 140

Conread position: 3-370
Cow position: chr11:33192848-33192480 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 134

Conread position: 3-370
Cow position: chr11:34638086-34637720 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 53

Conread position: 3-370
Cow position: chr11:35141918-35141551 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:36167340-36166975 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 0

Conread position: 3-370
Cow position: chr11:37285227-37284859 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 3-370
Cow position: chr11:38574067-38573700 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 134

Conread position: 3-370
Cow position: chr11:38638589-38638956 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 237

Conread position: 3-370
Cow position: chr11:40404710-40404343 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr11:41041227-41040860 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:41260511-41260144 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:41261586-41261953 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:41314713-41315081 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 103

Conread position: 3-370
Cow position: chr11:44043642-44044005 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 132

Conread position: 3-370
Cow position: chr11:44356470-44356116 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 3-370
Cow position: chr11:44893461-44893096 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 78

Conread position: 3-370
Cow position: chr11:46142571-46142204 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:47676643-47677014 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:47846408-47846775 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:48885118-48885485 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:52424546-52424918 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 134

Conread position: 3-370
Cow position: chr11:54580289-54580655 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:56622840-56623207 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:56827019-56827386 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:57594673-57594306 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:57624608-57624241 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr11:57760269-57760636 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:58137129-58137496 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:58380962-58381328 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:58947717-58947358 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 113

Conread position: 3-370
Cow position: chr11:61876235-61876601 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:61891424-61891783 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 74

Conread position: 3-370
Cow position: chr11:62009383-62009016 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 296

Conread position: 3-370
Cow position: chr11:63390064-63389698 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:63860226-63859860 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 55

Conread position: 3-370
Cow position: chr11:64382066-64382433 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr11:65670760-65671127 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:66389597-66389230 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:66664002-66663639 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:67454356-67454722 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:68136611-68136978 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:71957461-71957097 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:72016484-72016118 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:72050398-72050776 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 144

Conread position: 3-370
Cow position: chr11:72369469-72369832 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 0

Conread position: 3-370
Cow position: chr11:75402110-75401747 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 18

Conread position: 3-370
Cow position: chr11:77011661-77011294 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:81359855-81360222 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:82990795-82991163 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr11:84967526-84967892 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-372
Cow position: chr11:26592360-26591992 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 133

Conread position: 3-372
Cow position: chr11:84184199-84184568 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-372
Cow position: chr11:87147799-87147430 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-373
Cow position: chr11:1268087-1267717 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-373
Cow position: chr11:5229612-5229242 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-373
Cow position: chr11:17831764-17831389 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 231

Conread position: 3-373
Cow position: chr11:22843269-22842899 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-374
Cow position: chr11:14426189-14425811 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 3-379
Cow position: chr11:3681433-3681055 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 7

Conread position: 3-381
Cow position: chr11:83001446-83001820 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-384
Cow position: chr11:35362968-35363344 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 18

Conread position: 3-384
Cow position: chr11:50197965-50197595 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 70

Conread position: 3-386
Cow position: chr11:15047875-15048258 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-388
Cow position: chr11:10094822-10095197 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 50

Conread position: 3-388
Cow position: chr11:13942287-13942663 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 36

Conread position: 3-388
Cow position: chr11:55116942-55117326 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 232

Conread position: 3-388
Cow position: chr11:56751911-56751534 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 236

Conread position: 3-388
Cow position: chr11:67951480-67951109 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 261
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 64, 142

Conread position: 3-409
Cow position: chr11:61431319-61430913 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-436
Cow position: chr11:16795679-16795252 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 0

Conread position: 3-459
Cow position: chr11:33012361-33012820 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 133

Conread position: 3-459
Cow position: chr11:58399737-58400185 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 195

Conread position: 3-460
Cow position: chr11:44233845-44234276 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 74

Conread position: 3-473
Cow position: chr11:84891297-84890810 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 311
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 69, 200

Conread position: 3-476
Cow position: chr11:63847331-63847791 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 140

Conread position: 3-477
Cow position: chr11:6153887-6154352 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 52

Conread position: 3-477
Cow position: chr11:17321137-17321603 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 102

Conread position: 3-478
Cow position: chr11:1486401-1485921 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 56

Conread position: 3-480
Cow position: chr11:52297744-52297274 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 73

Conread position: 3-480
Cow position: chr11:68571203-68570719 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 289

Conread position: 3-483
Cow position: chr11:17890254-17889776 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 76

Conread position: 3-483
Cow position: chr11:38810853-38810397 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 319
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 281, 85

Conread position: 3-490
Cow position: chr11:30164968-30165467 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 277

Conread position: 3-491
Cow position: chr11:21894670-21894199 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 59

Conread position: 3-491
Cow position: chr11:25792224-25791733 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 334

Conread position: 3-491
Cow position: chr11:67746755-67747242 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 36

Conread position: 3-491
Cow position: chr11:77759281-77758802 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 64

Conread position: 3-492
Cow position: chr11:4731808-4732299 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 152

Conread position: 3-492
Cow position: chr11:65409674-65409197 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 323
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 245, 74

Conread position: 3-495
Cow position: chr11:2309338-2309833 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 64

Conread position: 3-496
Cow position: chr11:3393741-3393248 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 262

Conread position: 3-496
Cow position: chr11:30707968-30708467 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 7

Conread position: 3-496
Cow position: chr11:50153345-50152853 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 98

Conread position: 3-496
Cow position: chr11:61455068-61454566 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 301

Conread position: 3-499
Cow position: chr11:74929246-74929751 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 292

Conread position: 3-500
Cow position: chr11:48271668-48272166 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 169

Conread position: 3-519
Cow position: chr11:44031468-44031986 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 39

Conread position: 3-522
Cow position: chr11:75480568-75480036 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 174

Conread position: 3-525
Cow position: chr11:77745794-77745265 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 12

Conread position: 3-624
Cow position: chr11:2345526-2344904 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 596, 132

Conread position: 4-151
Cow position: chr11:26467719-26467864 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 122, 0

Conread position: 4-168
Cow position: chr11:30495327-30495490 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 4-170
Cow position: chr11:87154482-87154315 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 68, 0

Conread position: 4-182
Cow position: chr11:82231861-82232038 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 67, 121

Conread position: 4-190
Cow position: chr11:60677891-60677712 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 4-205
Cow position: chr11:10886512-10886715 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 112, 63

Conread position: 4-218
Cow position: chr11:9214351-9214128 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 81, 103

Conread position: 4-218
Cow position: chr11:15702342-15702131 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 76, 107

Conread position: 4-219
Cow position: chr11:70399301-70399524 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 63, 0

Conread position: 4-225
Cow position: chr11:24601423-24601639 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 71, 138

Conread position: 4-225
Cow position: chr11:38070865-38071083 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 79, 0

Conread position: 4-231
Cow position: chr11:84924774-84924533 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 126, 212

Conread position: 4-244
Cow position: chr11:81602976-81603222 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 4-248
Cow position: chr11:10149936-10149695 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 0

Conread position: 4-248
Cow position: chr11:70639231-70639474 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 0

Conread position: 4-249
Cow position: chr11:39808095-39808347 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 125, 45

Conread position: 4-251
Cow position: chr11:259712-259468 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 68, 152

Conread position: 4-253
Cow position: chr11:74216821-74216566 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 11, 28

Conread position: 4-255
Cow position: chr11:84531863-84531613 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 135, 24

Conread position: 4-260
Cow position: chr11:51390083-51389823 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 112, 63

Conread position: 4-269
Cow position: chr11:417080-416816 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 38

Conread position: 4-272
Cow position: chr11:10760129-10759860 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 182
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 70, 35

Conread position: 4-287
Cow position: chr11:81652763-81652476 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 189
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 73

Conread position: 4-288
Cow position: chr11:51028834-51029106 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 131

Conread position: 4-288
Cow position: chr11:55014535-55014254 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 220

Conread position: 4-290
Cow position: chr11:68594583-68594876 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 195
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 153

Conread position: 4-291
Cow position: chr11:37419602-37419314 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 132

Conread position: 4-321
Cow position: chr11:25386541-25386857 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 4-324
Cow position: chr11:27817799-27817480 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 10

Conread position: 4-325
Cow position: chr11:77029636-77029959 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 63

Conread position: 4-339
Cow position: chr11:20804280-20803941 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 89, 194

Conread position: 4-345
Cow position: chr11:31884983-31885331 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 44

Conread position: 4-346
Cow position: chr11:9960242-9959895 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 225
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 121, 244

Conread position: 4-346
Cow position: chr11:47104790-47104456 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 237
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 125, 46

Conread position: 4-349
Cow position: chr11:33526537-33526890 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 301

Conread position: 4-370
Cow position: chr11:15495806-15496172 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 132

Conread position: 4-370
Cow position: chr11:25525251-25525605 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 4-370
Cow position: chr11:40139156-40138791 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 98

Conread position: 4-370
Cow position: chr11:40375482-40375117 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 132

Conread position: 4-370
Cow position: chr11:41422363-41421997 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 132

Conread position: 4-381
Cow position: chr11:61397202-61396825 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 132

Conread position: 4-382
Cow position: chr11:52463919-52464292 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 263
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 115, 211

Conread position: 4-386
Cow position: chr11:26550887-26551266 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 62

Conread position: 4-388
Cow position: chr11:81337500-81337119 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 73

Conread position: 4-452
Cow position: chr11:62376959-62376520 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 407, 38

Conread position: 4-459
Cow position: chr11:85189909-85189459 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 291
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 171, 24

Conread position: 4-477
Cow position: chr11:42793489-42793029 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 154

Conread position: 4-480
Cow position: chr11:76114123-76114598 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 154

Conread position: 4-483
Cow position: chr11:43361320-43360833 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 200

Conread position: 4-492
Cow position: chr11:7589666-7590152 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 307
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 34

Conread position: 4-510
Cow position: chr11:35579726-35580230 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 22

Conread position: 4-525
Cow position: chr11:33350230-33349714 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 389, 152

Conread position: 5-125
Cow position: chr11:10687549-10687429 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-126
Cow position: chr11:23249854-23249974 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 5-131
Cow position: chr11:21395872-21395995 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 5-132
Cow position: chr11:82145109-82144978 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 5-134
Cow position: chr11:67848551-67848422 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-143
Cow position: chr11:26399505-26399367 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-164
Cow position: chr11:74304353-74304195 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 5-165
Cow position: chr11:5710309-5710470 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 67, 0

Conread position: 5-166
Cow position: chr11:41093455-41093294 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-176
Cow position: chr11:19112865-19112690 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 135, 0

Conread position: 5-187
Cow position: chr11:4266535-4266358 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 48, 42

Conread position: 5-188
Cow position: chr11:34261021-34261209 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 122, 173

Conread position: 5-188
Cow position: chr11:39792413-39792596 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 132, 62

Conread position: 5-190
Cow position: chr11:34299109-34299299 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 122, 173

Conread position: 5-201
Cow position: chr11:30777383-30777579 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 157
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 141, 131

Conread position: 5-201
Cow position: chr11:32737422-32737226 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 5-215
Cow position: chr11:84723801-84724016 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 5-218
Cow position: chr11:77252982-77252764 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 5-225
Cow position: chr11:11592401-11592627 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 61, 0

Conread position: 5-232
Cow position: chr11:54361391-54361619 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 78, 62

Conread position: 5-233
Cow position: chr11:14469920-14470149 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 180
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 37

Conread position: 5-233
Cow position: chr11:44818579-44818807 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-240
Cow position: chr11:63166714-63166479 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 173

Conread position: 5-244
Cow position: chr11:45632320-45632085 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 117, 149

Conread position: 5-245
Cow position: chr11:70031069-70031309 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-251
Cow position: chr11:40300350-40300105 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 5-254
Cow position: chr11:16506960-16506713 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 5-254
Cow position: chr11:67804199-67804446 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 33, 140

Conread position: 5-255
Cow position: chr11:8143748-8143498 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 28, 176

Conread position: 5-255
Cow position: chr11:16262584-16262329 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 136, 43

Conread position: 5-255
Cow position: chr11:21921643-21921898 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 119, 108

Conread position: 5-255
Cow position: chr11:21983905-21984153 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 5-255
Cow position: chr11:48231915-48232160 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 5-255
Cow position: chr11:69402803-69402551 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 110, 50

Conread position: 5-255
Cow position: chr11:74316170-74316411 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 156, 64

Conread position: 5-256
Cow position: chr11:55761258-55761511 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 63

Conread position: 5-260
Cow position: chr11:49099231-49098975 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 5-260
Cow position: chr11:66858567-66858313 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 241

Conread position: 5-264
Cow position: chr11:75354797-75355056 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-267
Cow position: chr11:56854345-56854606 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 5-268
Cow position: chr11:58049228-58048965 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 124

Conread position: 5-269
Cow position: chr11:1573917-1573651 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 137, 220

Conread position: 5-269
Cow position: chr11:54668519-54668251 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 119, 103

Conread position: 5-269
Cow position: chr11:67295589-67295312 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 67, 148

Conread position: 5-270
Cow position: chr11:41726200-41726471 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 120, 38

Conread position: 5-270
Cow position: chr11:58140110-58140374 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 39

Conread position: 5-275
Cow position: chr11:82796785-82796535 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 137, 0

Conread position: 5-279
Cow position: chr11:7705091-7705364 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 16

Conread position: 5-279
Cow position: chr11:38220179-38220449 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 5-281
Cow position: chr11:30929802-30930078 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 131

Conread position: 5-282
Cow position: chr11:85679954-85680236 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 185
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 121, 153

Conread position: 5-283
Cow position: chr11:22103233-22103511 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-284
Cow position: chr11:4023937-4023653 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 147, 16

Conread position: 5-284
Cow position: chr11:25184391-25184669 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 129, 58

Conread position: 5-288
Cow position: chr11:2057200-2057483 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 36

Conread position: 5-288
Cow position: chr11:9388754-9389037 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-288
Cow position: chr11:9432794-9433080 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 79

Conread position: 5-288
Cow position: chr11:10214079-10213807 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 5-288
Cow position: chr11:10851534-10851817 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-288
Cow position: chr11:14259545-14259262 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-288
Cow position: chr11:26067709-26067426 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-288
Cow position: chr11:26121521-26121238 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-288
Cow position: chr11:35630166-35630452 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 93, 198

Conread position: 5-288
Cow position: chr11:40772225-40771943 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 5-288
Cow position: chr11:42292364-42292082 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 0

Conread position: 5-288
Cow position: chr11:46328975-46329253 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 5-288
Cow position: chr11:49171085-49170806 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 159

Conread position: 5-288
Cow position: chr11:58973368-58973085 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-291
Cow position: chr11:34841728-34841435 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 5-291
Cow position: chr11:59942809-59943102 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 5-295
Cow position: chr11:37509980-37510280 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 69, 0

Conread position: 5-324
Cow position: chr11:77749690-77750000 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 5-324
Cow position: chr11:79020062-79019726 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 218, 170

Conread position: 5-335
Cow position: chr11:24907354-24907680 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 5-335
Cow position: chr11:31930147-31930494 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 132

Conread position: 5-340
Cow position: chr11:44131791-44132116 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 222
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 134, 84

Conread position: 5-345
Cow position: chr11:15279404-15279068 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 238
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 119, 208

Conread position: 5-346
Cow position: chr11:4384100-4384436 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 214

Conread position: 5-346
Cow position: chr11:18490169-18489839 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 233
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 120, 62

Conread position: 5-346
Cow position: chr11:23116875-23117207 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 227
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 124, 50

Conread position: 5-346
Cow position: chr11:39473536-39473881 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 233
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 118, 235

Conread position: 5-348
Cow position: chr11:7152416-7152759 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 131

Conread position: 5-348
Cow position: chr11:8212246-8212589 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 44

Conread position: 5-348
Cow position: chr11:8841278-8840927 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 62

Conread position: 5-348
Cow position: chr11:44255491-44255833 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 26

Conread position: 5-348
Cow position: chr11:44579814-44579475 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 0

Conread position: 5-348
Cow position: chr11:46780650-46780307 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-348
Cow position: chr11:48692863-48693204 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 297

Conread position: 5-348
Cow position: chr11:49522412-49522756 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 5-348
Cow position: chr11:53428412-53428068 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 54

Conread position: 5-348
Cow position: chr11:83356866-83357204 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 0

Conread position: 5-349
Cow position: chr11:59701955-59702299 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 121

Conread position: 5-357
Cow position: chr11:37068824-37068481 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 54

Conread position: 5-357
Cow position: chr11:54509233-54509589 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 236
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 108, 43

Conread position: 5-367
Cow position: chr11:66903383-66903031 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 246
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 158, 0

Conread position: 5-370
Cow position: chr11:27923256-27923621 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 294

Conread position: 5-370
Cow position: chr11:42373213-42373574 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 134

Conread position: 5-373
Cow position: chr11:35737940-35737571 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 23

Conread position: 5-373
Cow position: chr11:56463781-56464150 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 277

Conread position: 5-373
Cow position: chr11:60999121-60998752 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 5-373
Cow position: chr11:74564394-74564026 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-373
Cow position: chr11:79995335-79994983 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 79

Conread position: 5-374
Cow position: chr11:24032398-24032762 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 136

Conread position: 5-374
Cow position: chr11:44153663-44153294 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 288

Conread position: 5-374
Cow position: chr11:49679674-49679304 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 25

Conread position: 5-374
Cow position: chr11:66943489-66943119 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 322

Conread position: 5-374
Cow position: chr11:68196772-68197144 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 137

Conread position: 5-374
Cow position: chr11:84628477-84628111 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 133

Conread position: 5-379
Cow position: chr11:19216472-19216102 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 266

Conread position: 5-381
Cow position: chr11:5273155-5272780 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 0

Conread position: 5-381
Cow position: chr11:11991418-11991788 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 5-381
Cow position: chr11:12353472-12353097 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 5-381
Cow position: chr11:21631578-21631958 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 298

Conread position: 5-381
Cow position: chr11:23883751-23884126 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 43

Conread position: 5-381
Cow position: chr11:41167274-41166895 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 39

Conread position: 5-381
Cow position: chr11:54179067-54178691 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 288

Conread position: 5-381
Cow position: chr11:72314011-72314392 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 136

Conread position: 5-386
Cow position: chr11:71332919-71333296 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 57

Conread position: 5-388
Cow position: chr11:18140704-18141092 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 289

Conread position: 5-388
Cow position: chr11:55116183-55115800 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 262
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 44, 259

Conread position: 5-388
Cow position: chr11:61846538-61846151 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 257
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 133, 23

Conread position: 5-457
Cow position: chr11:80591760-80592215 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 404

Conread position: 5-459
Cow position: chr11:19099068-19098615 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 378, 106

Conread position: 5-459
Cow position: chr11:38843035-38843490 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 16

Conread position: 5-459
Cow position: chr11:44512050-44511586 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 5-467
Cow position: chr11:8563678-8563215 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 62

Conread position: 5-467
Cow position: chr11:32076667-32076204 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 87

Conread position: 5-467
Cow position: chr11:40133381-40132920 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 302

Conread position: 5-467
Cow position: chr11:68130806-68131272 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 326

Conread position: 5-477
Cow position: chr11:40467651-40467174 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 173

Conread position: 5-479
Cow position: chr11:5482026-5481546 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 136

Conread position: 5-479
Cow position: chr11:56144812-56145287 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 266

Conread position: 5-483
Cow position: chr11:41577535-41577064 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 286

Conread position: 6-189
Cow position: chr11:3176854-3177030 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 6-195
Cow position: chr11:77767136-77766949 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 123, 0

Conread position: 6-208
Cow position: chr11:28692562-28692367 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 91

Conread position: 6-209
Cow position: chr11:60702384-60702593 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 130, 0

Conread position: 6-210
Cow position: chr11:49555644-49555435 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 118, 71

Conread position: 6-217
Cow position: chr11:1120841-1121057 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 85, 59

Conread position: 6-240
Cow position: chr11:82345727-82345489 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 101, 166

Conread position: 6-252
Cow position: chr11:12950610-12950355 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 190
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 127, 234

Conread position: 6-254
Cow position: chr11:75510781-75510533 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 163

Conread position: 6-275
Cow position: chr11:43307177-43306906 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 122, 15

Conread position: 6-288
Cow position: chr11:15695342-15695064 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 36

Conread position: 6-288
Cow position: chr11:32866462-32866189 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 258, 53

Conread position: 6-288
Cow position: chr11:33687073-33686793 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 0

Conread position: 6-288
Cow position: chr11:37292328-37292610 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 71

Conread position: 6-288
Cow position: chr11:74193485-74193197 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 189
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 135, 113

Conread position: 6-289
Cow position: chr11:4740178-4740455 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 113, 94

Conread position: 6-335
Cow position: chr11:66945171-66944846 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 151, 46

Conread position: 6-340
Cow position: chr11:22961932-22962264 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 230
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 122, 33

Conread position: 6-345
Cow position: chr11:1031757-1032100 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 61

Conread position: 6-346
Cow position: chr11:19717225-19716886 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 218
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 142, 120

Conread position: 6-346
Cow position: chr11:21842328-21841967 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 80, 66

Conread position: 6-346
Cow position: chr11:42683167-42682825 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 237
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 118, 161

Conread position: 6-346
Cow position: chr11:76961003-76961353 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 237
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 122, 61

Conread position: 6-348
Cow position: chr11:15501302-15500958 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 6-348
Cow position: chr11:37727499-37727840 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 107

Conread position: 6-348
Cow position: chr11:40458594-40458934 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 6-348
Cow position: chr11:63144470-63144125 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 228
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 33, 62

Conread position: 6-381
Cow position: chr11:33601218-33600841 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 295

Conread position: 6-387
Cow position: chr11:2688879-2688500 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 249

Conread position: 6-387
Cow position: chr11:76767831-76768217 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 256
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 125, 292

Conread position: 6-388
Cow position: chr11:951744-952122 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 211

Conread position: 6-394
Cow position: chr11:59004198-59003811 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 265
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 73, 66

Conread position: 6-498
Cow position: chr11:23138601-23138093 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 63

Conread position: 7-172
Cow position: chr11:5657126-5656961 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 7-176
Cow position: chr11:35556282-35556449 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 84, 0

Conread position: 7-192
Cow position: chr11:67862842-67862649 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 23, 0

Conread position: 7-215
Cow position: chr11:9066164-9065945 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 14

Conread position: 7-218
Cow position: chr11:17781622-17781404 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 37, 0

Conread position: 7-222
Cow position: chr11:77746662-77746443 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 149
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 128, 14

Conread position: 7-232
Cow position: chr11:8241715-8241496 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 131, 78

Conread position: 7-252
Cow position: chr11:8713740-8713981 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 30, 0

Conread position: 7-252
Cow position: chr11:27462935-27462694 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 120, 178

Conread position: 7-255
Cow position: chr11:56892250-56892497 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 121, 65

Conread position: 7-256
Cow position: chr11:49439330-49439577 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 7-267
Cow position: chr11:52379975-52379721 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 7-288
Cow position: chr11:2643270-2642978 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 192
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 120, 139

Conread position: 7-289
Cow position: chr11:64729795-64729512 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 183
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 179, 103

Conread position: 7-324
Cow position: chr11:25336555-25336864 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 84

Conread position: 7-346
Cow position: chr11:8582458-8582113 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 232
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 113, 45

Conread position: 7-347
Cow position: chr11:8827256-8827592 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 134

Conread position: 7-348
Cow position: chr11:81551711-81551372 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 129

Conread position: 7-373
Cow position: chr11:38649057-38649417 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 7-373
Cow position: chr11:43509911-43509545 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-384
Cow position: chr11:36986439-36986811 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 190

Conread position: 7-490
Cow position: chr11:31866072-31866557 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 322

Conread position: 7-525
Cow position: chr11:3780941-3780431 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 346
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 200, 115

Conread position: 8-225
Cow position: chr11:56303073-56303296 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 46

Conread position: 8-228
Cow position: chr11:71792620-71792397 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 117, 76

Conread position: 8-253
Cow position: chr11:81162981-81162734 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 240, 0

Conread position: 8-255
Cow position: chr11:38831941-38831694 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 8-288
Cow position: chr11:63507912-63508194 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 202
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 135, 40

Conread position: 8-328
Cow position: chr11:9165978-9165656 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 82, 228

Conread position: 8-341
Cow position: chr11:18758189-18757848 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 229
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 114, 73

Conread position: 8-346
Cow position: chr11:1882857-1882528 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 223
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 118, 20

Conread position: 8-346
Cow position: chr11:30790198-30789854 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 249
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 120, 96

Conread position: 8-346
Cow position: chr11:55696818-55697150 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 120, 18

Conread position: 9-194
Cow position: chr11:55207271-55207084 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 113, 0

Conread position: 9-270
Cow position: chr11:70248321-70248581 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 226

Conread position: 9-346
Cow position: chr11:40642992-40643333 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 219
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 139

Conread position: 9-349
Cow position: chr11:19890359-19890696 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 204

Conread position: 9-467
Cow position: chr11:85390441-85389992 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 299
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 379, 58

Conread position: 10-200
Cow position: chr11:456669-456476 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 62, 149

Conread position: 10-232
Cow position: chr11:77757243-77757022 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 120, 57

Conread position: 10-239
Cow position: chr11:1500148-1499918 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 56, 0

Conread position: 10-284
Cow position: chr11:9971482-9971208 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 114, 149

Conread position: 10-321
Cow position: chr11:31574130-31574435 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 115, 47

Conread position: 10-343
Cow position: chr11:42380396-42380071 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 234
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 125, 62

Conread position: 10-346
Cow position: chr11:3947074-3946733 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 124, 38

Conread position: 10-346
Cow position: chr11:10371453-10371116 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 231
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 117, 228

Conread position: 10-346
Cow position: chr11:40251132-40250790 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 54

Conread position: 10-346
Cow position: chr11:50823981-50824315 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 221
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 129, 38

Conread position: 10-388
Cow position: chr11:77764264-77763881 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 251
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 88, 57

Conread position: 11-131
Cow position: chr11:65667421-65667541 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-180
Cow position: chr11:30255861-30256030 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 135, 125

Conread position: 11-190
Cow position: chr11:81285865-81286043 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 135, 125

Conread position: 11-249
Cow position: chr11:22499906-22499667 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 26, 141

Conread position: 11-255
Cow position: chr11:53690663-53690915 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 40, 245

Conread position: 11-274
Cow position: chr11:697700-697431 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 65, 180

Conread position: 11-284
Cow position: chr11:17980884-17981158 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 254

Conread position: 11-288
Cow position: chr11:18592287-18592017 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 88, 0

Conread position: 11-288
Cow position: chr11:64334333-64334611 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 11-289
Cow position: chr11:43996660-43996375 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 0

Conread position: 11-341
Cow position: chr11:76969806-76969472 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 220
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 65, 36

Conread position: 11-346
Cow position: chr11:62873302-62872961 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 225

Conread position: 11-346
Cow position: chr11:68664401-68664730 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 223
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 114, 37

Conread position: 11-347
Cow position: chr11:63469364-63469695 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 11-347
Cow position: chr11:78132536-78132204 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 236
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 46, 51

Conread position: 11-348
Cow position: chr11:10294073-10294409 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 261

Conread position: 11-468
Cow position: chr11:33413719-33414172 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 105

Conread position: 12-254
Cow position: chr11:15999867-16000116 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 189
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 61, 111

Conread position: 12-260
Cow position: chr11:39152165-39152410 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 0

Conread position: 12-288
Cow position: chr11:49250651-49250371 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 186
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 51, 237

Conread position: 12-288
Cow position: chr11:86721055-86720782 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 17, 0

Conread position: 12-291
Cow position: chr11:43390619-43390886 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 183
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 12-324
Cow position: chr11:75558569-75558255 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 126

Conread position: 12-327
Cow position: chr11:60515487-60515173 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 83

Conread position: 12-343
Cow position: chr11:49037012-49036682 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 232
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 124, 37

Conread position: 12-344
Cow position: chr11:12896180-12896519 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 239
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 111, 36

Conread position: 12-346
Cow position: chr11:40402352-40402021 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 9

Conread position: 12-373
Cow position: chr11:21856438-21856798 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 0

Conread position: 13-197
Cow position: chr11:69815282-69815093 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 115, 54

Conread position: 13-198
Cow position: chr11:39498582-39498761 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 126, 0

Conread position: 13-254
Cow position: chr11:67246285-67246526 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 129, 78

Conread position: 13-290
Cow position: chr11:66558097-66558367 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 32, 46

Conread position: 13-346
Cow position: chr11:21887059-21886720 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 112, 77

Conread position: 13-492
Cow position: chr11:42017146-42016672 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 149

Conread position: 14-219
Cow position: chr11:81296744-81296954 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 126, 0

Conread position: 14-259
Cow position: chr11:27833341-27833092 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 68, 162

Conread position: 14-264
Cow position: chr11:83044128-83043879 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 14-279
Cow position: chr11:36765915-36766185 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 24, 203

Conread position: 14-284
Cow position: chr11:58919577-58919854 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 180
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 128, 97

Conread position: 14-288
Cow position: chr11:64043729-64044002 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 0

Conread position: 14-324
Cow position: chr11:34412580-34412886 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 25

Conread position: 14-346
Cow position: chr11:30851820-30851487 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 220
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 111, 64

Conread position: 15-257
Cow position: chr11:81301200-81300959 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 57, 178

Conread position: 15-289
Cow position: chr11:9617205-9616929 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 107, 66

Conread position: 15-290
Cow position: chr11:4406301-4406584 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 64, 6

Conread position: 16-214
Cow position: chr11:84722253-84722453 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 142, 123

Conread position: 16-224
Cow position: chr11:46952237-46952452 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 63, 34

Conread position: 16-288
Cow position: chr11:40491896-40492171 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 107, 232

Conread position: 16-324
Cow position: chr11:7394633-7394951 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 230
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 23

Conread position: 17-248
Cow position: chr11:50777792-50778023 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 129, 116

Conread position: 17-255
Cow position: chr11:41177150-41176913 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 17-288
Cow position: chr11:38641362-38641632 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 71

Conread position: 17-288
Cow position: chr11:74746252-74746523 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 17-289
Cow position: chr11:26793994-26793722 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 17-483
Cow position: chr11:48901593-48901131 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 240

Conread position: 19-228
Cow position: chr11:29694325-29694541 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 94, 0

Conread position: 20-232
Cow position: chr11:18484718-18484505 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 47, 18

Conread position: 20-241
Cow position: chr11:8246607-8246836 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 177
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 46, 0

Conread position: 20-247
Cow position: chr11:4067916-4068135 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 47, 0

Conread position: 20-251
Cow position: chr11:69565729-69565963 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 109, 27

Conread position: 20-254
Cow position: chr11:48696692-48696932 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 108, 0

Conread position: 20-279
Cow position: chr11:83403477-83403743 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 20-287
Cow position: chr11:8495529-8495790 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 38

Conread position: 20-288
Cow position: chr11:44622160-44622431 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 102, 59

Conread position: 20-389
Cow position: chr11:17969090-17968725 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 282

Conread position: 20-391
Cow position: chr11:63157423-63157056 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 261
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 110, 174

Conread position: 20-510
Cow position: chr11:16251769-16251273 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 29

Conread position: 21-290
Cow position: chr11:26118575-26118306 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 21-346
Cow position: chr11:47169507-47169191 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 232
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 107, 31

Conread position: 21-346
Cow position: chr11:62215991-62215663 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 158

Conread position: 21-388
Cow position: chr11:58614136-58614512 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 46

Conread position: 22-152
Cow position: chr11:27359768-27359897 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 119, 0

Conread position: 22-240
Cow position: chr11:64904524-64904749 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 195

Conread position: 22-241
Cow position: chr11:2962647-2962864 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 166, 0

Conread position: 22-247
Cow position: chr11:73626624-73626852 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 100, 136

Conread position: 22-253
Cow position: chr11:33754438-33754200 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 111, 45

Conread position: 22-346
Cow position: chr11:49982603-49982934 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 218
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 64, 149

Conread position: 23-324
Cow position: chr11:72007930-72008226 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 102, 44

Conread position: 23-348
Cow position: chr11:57253762-57254087 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 113

Conread position: 24-284
Cow position: chr11:26560887-26560621 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 105, 0

Conread position: 26-228
Cow position: chr11:57865502-57865295 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 101, 0

Conread position: 26-233
Cow position: chr11:6084595-6084383 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 144

Conread position: 26-324
Cow position: chr11:47193014-47193313 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 111, 233

Conread position: 26-348
Cow position: chr11:29662636-29662301 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 268

Conread position: 26-477
Cow position: chr11:59902389-59902835 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 174

Conread position: 27-265
Cow position: chr11:62539510-62539753 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 101, 50

Conread position: 27-272
Cow position: chr11:18787664-18787419 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 115, 185

Conread position: 27-289
Cow position: chr11:11740003-11739735 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 177

Conread position: 27-341
Cow position: chr11:11858165-11858488 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 98, 40

Conread position: 27-346
Cow position: chr11:22638349-22638034 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 214
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 101, 131

Conread position: 28-342
Cow position: chr11:49211328-49211022 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 223
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 36, 99

Conread position: 28-362
Cow position: chr11:70746032-70745710 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 226
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 160, 63

Conread position: 28-370
Cow position: chr11:28597486-28597140 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 236
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 26, 236

Conread position: 29-231
Cow position: chr11:44222426-44222627 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 29-255
Cow position: chr11:72291227-72291457 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 177
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 0

Conread position: 29-356
Cow position: chr11:27325984-27326306 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 168

Conread position: 30-348
Cow position: chr11:58989994-58990324 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 284

Conread position: 31-343
Cow position: chr11:35881400-35881720 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 224
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 108, 145

Conread position: 32-279
Cow position: chr11:14343152-14343400 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 84, 56

Conread position: 32-283
Cow position: chr11:54105014-54104764 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 32-284
Cow position: chr11:22290049-22289799 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 100, 59

Conread position: 32-291
Cow position: chr11:53750797-53750540 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 90

Conread position: 32-370
Cow position: chr11:25742597-25742935 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 32-480
Cow position: chr11:26535256-26535723 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 301
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 40, 277

Conread position: 32-570
Cow position: chr11:81067084-81066553 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 270

Conread position: 33-377
Cow position: chr11:64352225-64351878 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 239
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 180

Conread position: 33-494
Cow position: chr11:77751269-77750809 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 249

Conread position: 34-206
Cow position: chr11:37752883-37752711 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 34-348
Cow position: chr11:40636266-40636580 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 102

Conread position: 35-192
Cow position: chr11:26651876-26652027 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 106, 0

Conread position: 35-251
Cow position: chr11:21728728-21728512 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 35-255
Cow position: chr11:19270302-19270084 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 35-255
Cow position: chr11:32655871-32656096 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 91, 57

Conread position: 35-256
Cow position: chr11:34023336-34023560 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 83, 205

Conread position: 35-288
Cow position: chr11:21938182-21937937 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 246, 81

Conread position: 35-291
Cow position: chr11:42491361-42491104 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 0

Conread position: 35-348
Cow position: chr11:48702999-48703316 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 232
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 45, 186

Conread position: 35-369
Cow position: chr11:3496355-3496689 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 35-372
Cow position: chr11:53314064-53313732 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 237
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 93, 130

Conread position: 36-256
Cow position: chr11:20451414-20451642 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 88, 111

Conread position: 37-287
Cow position: chr11:31843372-31843625 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 168
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 138, 162

Conread position: 38-175
Cow position: chr11:70427058-70427195 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 108, 98

Conread position: 38-252
Cow position: chr11:83586748-83586531 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 87, 29

Conread position: 39-245
Cow position: chr11:63909852-63910068 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 39-325
Cow position: chr11:64792327-64792031 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 191
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 280

Conread position: 40-288
Cow position: chr11:77237633-77237875 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 183
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 41-233
Cow position: chr11:17945203-17945395 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 153
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 105, 95

Conread position: 41-288
Cow position: chr11:69588135-69588382 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 95

Conread position: 42-219
Cow position: chr11:84134568-84134385 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 42-256
Cow position: chr11:20761312-20761525 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 21, 0

Conread position: 42-259
Cow position: chr11:67600252-67600470 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 80, 25

Conread position: 42-287
Cow position: chr11:22957784-22958034 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 169
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 101, 80

Conread position: 42-321
Cow position: chr11:67346139-67345857 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 133

Conread position: 42-324
Cow position: chr11:59959476-59959190 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 152, 201

Conread position: 42-348
Cow position: chr11:4032056-4031752 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 42-348
Cow position: chr11:45155168-45154863 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 195

Conread position: 42-370
Cow position: chr11:16088505-16088832 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 94

Conread position: 42-370
Cow position: chr11:32395763-32395435 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 94

Conread position: 42-381
Cow position: chr11:18920116-18919795 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 239
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 73, 0

Conread position: 42-388
Cow position: chr11:7925084-7924736 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 190

Conread position: 42-483
Cow position: chr11:8339897-8339458 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 260

Conread position: 43-286
Cow position: chr11:19800059-19800305 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 6

Conread position: 43-287
Cow position: chr11:76370010-76369769 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 94

Conread position: 43-346
Cow position: chr11:65764963-65764656 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 211
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 169, 57

Conread position: 43-370
Cow position: chr11:39654694-39654367 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 93

Conread position: 43-503
Cow position: chr11:22932466-22932008 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 299
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 60, 16

Conread position: 44-247
Cow position: chr11:35901511-35901721 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 80, 0

Conread position: 44-254
Cow position: chr11:50589563-50589782 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 44-255
Cow position: chr11:65987724-65987933 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 82, 167

Conread position: 44-290
Cow position: chr11:22709343-22709590 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 10, 16

Conread position: 44-490
Cow position: chr11:62978987-62979445 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 246

Conread position: 45-285
Cow position: chr11:32198454-32198691 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 45-288
Cow position: chr11:6644734-6644973 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 45-348
Cow position: chr11:84386115-84385833 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 210
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 46-348
Cow position: chr11:3999071-3998764 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 252

Conread position: 48-167
Cow position: chr11:77318670-77318785 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 48-239
Cow position: chr11:71455317-71455513 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 97, 69

Conread position: 48-259
Cow position: chr11:37536663-37536870 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 67, 0

Conread position: 48-284
Cow position: chr11:5989855-5989621 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 48-345
Cow position: chr11:47125078-47125376 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 210
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 79, 209

Conread position: 48-366
Cow position: chr11:81576236-81575919 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 48-370
Cow position: chr11:8525588-8525278 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 48-370
Cow position: chr11:23979353-23979675 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 48-370
Cow position: chr11:65407540-65407854 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 88

Conread position: 48-451
Cow position: chr11:33294275-33293870 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 268
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 306, 52

Conread position: 48-497
Cow position: chr11:29947418-29946968 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 310
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 113, 59

Conread position: 49-480
Cow position: chr11:51207943-51208362 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 32

Conread position: 51-203
Cow position: chr11:39140759-39140910 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 44, 0

Conread position: 52-234
Cow position: chr11:41105344-41105156 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 75, 9

Conread position: 52-259
Cow position: chr11:17514611-17514819 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 196, 0

Conread position: 52-345
Cow position: chr11:3083227-3082933 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 76, 9

Conread position: 52-346
Cow position: chr11:12010568-12010874 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 208
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 70, 169

Conread position: 52-347
Cow position: chr11:45677626-45677920 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 149

Conread position: 52-348
Cow position: chr11:68751135-68750836 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 213
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 76, 93

Conread position: 52-370
Cow position: chr11:52127535-52127219 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 54

Conread position: 52-386
Cow position: chr11:35207004-35206670 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 84

Conread position: 52-388
Cow position: chr11:45277638-45277303 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 163

Conread position: 52-459
Cow position: chr11:37117993-37118412 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 260

Conread position: 52-468
Cow position: chr11:67931958-67931556 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 282
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 258, 157

Conread position: 53-291
Cow position: chr11:12341647-12341885 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 83

Conread position: 53-344
Cow position: chr11:15406912-15406615 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 202
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 90, 28

Conread position: 53-370
Cow position: chr11:30837061-30837378 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 83

Conread position: 53-391
Cow position: chr11:8019503-8019830 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 233
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 85, 163

Conread position: 54-287
Cow position: chr11:6723737-6723507 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 108, 37

Conread position: 54-370
Cow position: chr11:33273461-33273130 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 219
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 6, 326

Conread position: 54-474
Cow position: chr11:15503638-15504047 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 285
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 14, 73

Conread position: 55-346
Cow position: chr11:1464990-1465282 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 195
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 70, 147

Conread position: 55-370
Cow position: chr11:49505021-49505336 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 81

Conread position: 56-348
Cow position: chr11:24045485-24045191 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 156
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 24, 0

Conread position: 58-255
Cow position: chr11:33184667-33184464 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 71, 86

Conread position: 58-293
Cow position: chr11:85546182-85546413 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 0

Conread position: 59-176
Cow position: chr11:54234908-54235025 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 79

Conread position: 59-251
Cow position: chr11:66726511-66726703 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 82, 8

Conread position: 59-284
Cow position: chr11:57069646-57069422 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 216

Conread position: 59-288
Cow position: chr11:18389332-18389103 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 180
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 189, 22

Conread position: 59-388
Cow position: chr11:28842973-28843309 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 226
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 37, 226

Conread position: 60-255
Cow position: chr11:83587276-83587473 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 68, 113

Conread position: 60-370
Cow position: chr11:24334237-24334547 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 76

Conread position: 61-370
Cow position: chr11:60629414-60629105 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 75

Conread position: 62-218
Cow position: chr11:53262019-53262185 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 62-348
Cow position: chr11:393582-393866 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 63-348
Cow position: chr11:8471797-8471509 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 195
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 62, 43

Conread position: 65-348
Cow position: chr11:32749637-32749921 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 31

Conread position: 66-288
Cow position: chr11:78703868-78704088 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 56, 171

Conread position: 66-370
Cow position: chr11:7120492-7120189 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 11

Conread position: 66-497
Cow position: chr11:40819111-40818673 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 75

Conread position: 67-248
Cow position: chr11:27242764-27242941 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 73, 98

Conread position: 67-259
Cow position: chr11:19491179-19491378 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 67-269
Cow position: chr11:34830465-34830262 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 47, 0

Conread position: 67-283
Cow position: chr11:59367561-59367350 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 170
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 10, 0

Conread position: 67-284
Cow position: chr11:50072504-50072720 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 61, 168

Conread position: 67-288
Cow position: chr11:1149236-1149462 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 144, 75

Conread position: 67-291
Cow position: chr11:4064607-4064400 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 120, 0

Conread position: 67-324
Cow position: chr11:33001535-33001788 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 67-346
Cow position: chr11:74849045-74849325 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 191

Conread position: 67-348
Cow position: chr11:7683361-7683643 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 58, 136

Conread position: 67-348
Cow position: chr11:18067314-18067030 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 199
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 40

Conread position: 67-349
Cow position: chr11:76706584-76706296 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 121

Conread position: 67-370
Cow position: chr11:26327945-26327647 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 85

Conread position: 67-370
Cow position: chr11:27925359-27925662 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 232

Conread position: 67-370
Cow position: chr11:34277284-34277587 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 69

Conread position: 67-370
Cow position: chr11:34278564-34278867 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 69

Conread position: 67-370
Cow position: chr11:40601675-40601371 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 70

Conread position: 67-386
Cow position: chr11:12316553-12316235 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 67-510
Cow position: chr11:27248028-27248464 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 69

Conread position: 68-247
Cow position: chr11:51144208-51144392 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 60, 153

Conread position: 68-288
Cow position: chr11:23495421-23495623 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 68-324
Cow position: chr11:57873393-57873662 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 77, 226

Conread position: 68-325
Cow position: chr11:76497230-76496975 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 173
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 73, 60

Conread position: 68-370
Cow position: chr11:52516145-52516447 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 208
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 222, 231

Conread position: 68-370
Cow position: chr11:69118832-69119135 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 213
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 91, 51

Conread position: 69-287
Cow position: chr11:19536545-19536316 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 92

Conread position: 69-291
Cow position: chr11:13067982-13067763 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 75, 165

Conread position: 69-291
Cow position: chr11:13162015-13162234 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 177
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 75, 165

Conread position: 69-344
Cow position: chr11:59603789-59604064 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 67

Conread position: 69-490
Cow position: chr11:58587871-58588303 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 224

Conread position: 70-269
Cow position: chr11:38097222-38097023 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 70-288
Cow position: chr11:80555796-80556012 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 18, 137

Conread position: 70-434
Cow position: chr11:18526355-18525990 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 41

Conread position: 71-210
Cow position: chr11:70424853-70424992 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 71-244
Cow position: chr11:58312352-58312528 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 71-255
Cow position: chr11:17083797-17083608 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 77, 66

Conread position: 71-370
Cow position: chr11:69006316-69006615 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 65

Conread position: 72-233
Cow position: chr11:29323823-29323662 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 74, 64

Conread position: 72-248
Cow position: chr11:25164941-25165117 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 72-288
Cow position: chr11:15681384-15681165 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 56, 12

Conread position: 72-297
Cow position: chr11:60827648-60827422 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 133

Conread position: 73-255
Cow position: chr11:50916600-50916410 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 73-319
Cow position: chr11:9237049-9236800 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 57, 176

Conread position: 73-325
Cow position: chr11:61207334-61207081 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 173
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 137

Conread position: 73-347
Cow position: chr11:64638975-64638711 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 69, 80

Conread position: 74-246
Cow position: chr11:23739601-23739423 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 54, 47

Conread position: 74-288
Cow position: chr11:15768279-15768061 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 23

Conread position: 74-346
Cow position: chr11:76675596-76675873 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 55, 128

Conread position: 75-288
Cow position: chr11:72719958-72720177 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 51, 82

Conread position: 77-215
Cow position: chr11:47607902-47608039 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 77-254
Cow position: chr11:12402007-12402181 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 69, 59

Conread position: 77-288
Cow position: chr11:36115297-36115080 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 77-322
Cow position: chr11:31900591-31900836 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 233, 219

Conread position: 77-348
Cow position: chr11:15560218-15559947 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 59

Conread position: 77-370
Cow position: chr11:22342262-22341969 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 59

Conread position: 77-370
Cow position: chr11:23866484-23866777 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 59

Conread position: 77-370
Cow position: chr11:58884042-58883749 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 59

Conread position: 78-308
Cow position: chr11:84199139-84198910 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 217

Conread position: 78-468
Cow position: chr11:41239728-41239336 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 214

Conread position: 79-204
Cow position: chr11:14642949-14642818 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 79-231
Cow position: chr11:3322354-3322200 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 99, 58

Conread position: 79-251
Cow position: chr11:57481566-57481403 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 93, 0

Conread position: 79-255
Cow position: chr11:23259068-23258890 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 160

Conread position: 79-269
Cow position: chr11:25565490-25565680 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 151
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 79-290
Cow position: chr11:81931525-81931315 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 157

Conread position: 79-347
Cow position: chr11:17765226-17764958 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 225

Conread position: 79-348
Cow position: chr11:31873113-31873379 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 155, 47

Conread position: 79-367
Cow position: chr11:50134617-50134315 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 210
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 221

Conread position: 79-370
Cow position: chr11:39032630-39032921 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 57

Conread position: 79-373
Cow position: chr11:42411053-42411346 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 14

Conread position: 79-496
Cow position: chr11:66733380-66733790 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 0

Conread position: 80-370
Cow position: chr11:19997151-19996861 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 53

Conread position: 80-483
Cow position: chr11:11752975-11752568 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 273
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 48, 176

Conread position: 80-525
Cow position: chr11:80788365-80787920 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 301
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 15

Conread position: 81-283
Cow position: chr11:26786984-26787188 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 48, 97

Conread position: 81-291
Cow position: chr11:37564651-37564449 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 102, 71

Conread position: 82-289
Cow position: chr11:30225436-30225222 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 43, 170

Conread position: 82-343
Cow position: chr11:47566421-47566144 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 42, 219

Conread position: 82-480
Cow position: chr11:53778164-53778562 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 150

Conread position: 83-246
Cow position: chr11:22504778-22504936 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 83-274
Cow position: chr11:19592581-19592390 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 83-324
Cow position: chr11:35981871-35981632 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 19, 0

Conread position: 83-346
Cow position: chr11:29328528-29328262 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 45, 23

Conread position: 83-346
Cow position: chr11:38870374-38870635 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 48, 135

Conread position: 83-370
Cow position: chr11:12177710-12177422 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 53

Conread position: 83-370
Cow position: chr11:23425298-23425011 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 53

Conread position: 83-370
Cow position: chr11:56021858-56022144 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 0

Conread position: 84-282
Cow position: chr11:5584596-5584795 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 84-288
Cow position: chr11:2911262-2911067 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 160
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 74, 0

Conread position: 84-288
Cow position: chr11:31236441-31236643 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 103, 0

Conread position: 84-325
Cow position: chr11:21365292-21365543 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 232

Conread position: 84-346
Cow position: chr11:36237933-36237664 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 180
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 32, 196

Conread position: 84-492
Cow position: chr11:43430910-43430498 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 268
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 67, 229

Conread position: 85-373
Cow position: chr11:36459366-36459653 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 173

Conread position: 86-243
Cow position: chr11:40609204-40609048 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 137, 0

Conread position: 86-288
Cow position: chr11:4052677-4052474 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 193, 0

Conread position: 86-322
Cow position: chr11:56797180-56796950 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 140

Conread position: 86-346
Cow position: chr11:26433046-26433306 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 50

Conread position: 86-348
Cow position: chr11:3703872-3704133 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 194, 0

Conread position: 86-466
Cow position: chr11:54216384-54216767 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 194

Conread position: 87-259
Cow position: chr11:56654061-56654233 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 87-288
Cow position: chr11:2093636-2093433 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 154

Conread position: 90-216
Cow position: chr11:56758116-56758241 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 56, 8

Conread position: 92-259
Cow position: chr11:32657617-32657784 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 149, 163

Conread position: 92-279
Cow position: chr11:37346999-37347193 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 66, 23

Conread position: 92-282
Cow position: chr11:56889352-56889162 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 151
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 92-284
Cow position: chr11:10364847-10364657 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 168, 0

Conread position: 92-288
Cow position: chr11:28848419-28848223 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 92-291
Cow position: chr11:54307865-54307666 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 92-342
Cow position: chr11:78705231-78705487 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 37, 94

Conread position: 92-346
Cow position: chr11:62202175-62201915 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 223

Conread position: 92-348
Cow position: chr11:11489732-11489476 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 92-348
Cow position: chr11:64082079-64082335 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 92-357
Cow position: chr11:34268560-34268827 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 84

Conread position: 92-370
Cow position: chr11:2294174-2294449 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 92-370
Cow position: chr11:48109416-48109694 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 45

Conread position: 92-370
Cow position: chr11:63149867-63149590 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 34

Conread position: 92-373
Cow position: chr11:6156988-6156708 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 199
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 40, 0

Conread position: 92-374
Cow position: chr11:36474860-36475138 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 11

Conread position: 92-393
Cow position: chr11:40740-41039 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 188, 45

Conread position: 92-483
Cow position: chr11:44637203-44636806 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 264
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 236, 249

Conread position: 92-495
Cow position: chr11:8564422-8564009 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 93-288
Cow position: chr11:2343846-2344033 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 93-290
Cow position: chr11:62750191-62749994 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 93-355
Cow position: chr11:17151066-17150799 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 33, 19

Conread position: 94-249
Cow position: chr11:13040615-13040463 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 94-269
Cow position: chr11:62016868-62016686 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 95-344
Cow position: chr11:30961670-30961923 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 206

Conread position: 95-346
Cow position: chr11:18117849-18118099 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 0

Conread position: 95-348
Cow position: chr11:25744883-25745133 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 148

Conread position: 95-370
Cow position: chr11:60945551-60945826 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 41

Conread position: 95-373
Cow position: chr11:42083038-42083318 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 47, 187

Conread position: 96-291
Cow position: chr11:52695204-52695402 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 97, 0

Conread position: 96-381
Cow position: chr11:14362088-14361804 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 97-284
Cow position: chr11:33905191-33905382 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 145

Conread position: 98-284
Cow position: chr11:70530124-70529938 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 98-288
Cow position: chr11:48672273-48672462 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 99-201
Cow position: chr11:58931015-58930913 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 99-267
Cow position: chr11:872424-872596 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 36, 55

Conread position: 99-288
Cow position: chr11:31837048-31837233 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 136, 0

Conread position: 99-477
Cow position: chr11:49105624-49106001 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 253
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 149, 43

Conread position: 100-257
Cow position: chr11:63518538-63518695 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 100-324
Cow position: chr11:65495764-65495538 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 26, 201

Conread position: 100-349
Cow position: chr11:32043917-32043669 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 190, 125

Conread position: 100-370
Cow position: chr11:9908925-9908655 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 46, 36

Conread position: 101-284
Cow position: chr11:16342832-16342649 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 101-370
Cow position: chr11:28126736-28126998 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 140, 35

Conread position: 102-490
Cow position: chr11:49152516-49152907 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 264
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 131, 22

Conread position: 103-290
Cow position: chr11:5418692-5418508 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 132, 0

Conread position: 103-349
Cow position: chr11:39433233-39433479 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 190, 196

Conread position: 103-370
Cow position: chr11:38021438-38021171 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 33

Conread position: 104-356
Cow position: chr11:18766091-18765839 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 32

Conread position: 104-357
Cow position: chr11:29655382-29655637 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 24, 204

Conread position: 105-285
Cow position: chr11:61427187-61427365 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 31, 0

Conread position: 105-370
Cow position: chr11:32030663-32030927 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 31

Conread position: 105-468
Cow position: chr11:43524194-43524554 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 52

Conread position: 106-284
Cow position: chr11:24438659-24438487 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 106-348
Cow position: chr11:11534325-11534090 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 204, 63

Conread position: 107-259
Cow position: chr11:39224028-39223878 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 107-288
Cow position: chr11:6594667-6594494 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 107-348
Cow position: chr11:30701293-30701534 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 183, 192

Conread position: 107-373
Cow position: chr11:53859858-53860124 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 109-284
Cow position: chr11:85678157-85678340 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 109-370
Cow position: chr11:62821759-62821498 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 37, 27

Conread position: 110-248
Cow position: chr11:10620812-10620674 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 110-256
Cow position: chr11:18210785-18210646 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 110-349
Cow position: chr11:20261661-20261422 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 36, 26

Conread position: 110-370
Cow position: chr11:9731340-9731080 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 26

Conread position: 110-370
Cow position: chr11:77179520-77179260 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 36, 26

Conread position: 110-386
Cow position: chr11:27605085-27605361 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 26

Conread position: 113-288
Cow position: chr11:23250139-23250313 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 169, 99

Conread position: 113-370
Cow position: chr11:20216050-20215788 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 180
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 76, 23

Conread position: 113-373
Cow position: chr11:31138818-31138558 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 113-460
Cow position: chr11:4412441-4412091 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 237
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 186, 166

Conread position: 113-500
Cow position: chr11:36929721-36929335 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 251
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 138, 97

Conread position: 114-373
Cow position: chr11:76205970-76206227 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 56, 18

Conread position: 115-288
Cow position: chr11:15467048-15467223 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 68

Conread position: 116-253
Cow position: chr11:45898798-45898661 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 116-324
Cow position: chr11:5527277-5527067 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 139, 185

Conread position: 117-259
Cow position: chr11:66265205-66265346 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 24, 42

Conread position: 117-348
Cow position: chr11:62710290-62710057 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 7, 0

Conread position: 119-290
Cow position: chr11:64029671-64029500 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 142
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 119-373
Cow position: chr11:58123455-58123708 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 123, 0

Conread position: 119-480
Cow position: chr11:59872511-59872878 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 247
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 194, 173

Conread position: 120-323
Cow position: chr11:15062052-15062247 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 131, 0

Conread position: 120-324
Cow position: chr11:64932703-64932507 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 132, 19

Conread position: 120-348
Cow position: chr11:44576151-44575923 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 129, 16

Conread position: 120-478
Cow position: chr11:17860568-17860209 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 240
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 193, 182

Conread position: 122-267
Cow position: chr11:77031778-77031633 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 122-274
Cow position: chr11:5187891-5187735 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 67, 34

Conread position: 123-248
Cow position: chr11:21497100-21497224 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 123-266
Cow position: chr11:61195262-61195407 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 123-319
Cow position: chr11:43897724-43897922 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 130, 175

Conread position: 123-324
Cow position: chr11:55744062-55744263 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 167, 173

Conread position: 123-347
Cow position: chr11:70838708-70838490 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 207, 49

Conread position: 123-348
Cow position: chr11:3303425-3303650 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 176

Conread position: 123-388
Cow position: chr11:23252014-23251750 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 132, 20

Conread position: 125-233
Cow position: chr11:44111214-44111106 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 125-285
Cow position: chr11:13894508-13894348 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 125-288
Cow position: chr11:61202745-61202916 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 127, 16

Conread position: 125-291
Cow position: chr11:21918659-21918497 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 21, 11

Conread position: 125-348
Cow position: chr11:28106403-28106180 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 21, 11

Conread position: 125-348
Cow position: chr11:69836043-69836264 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 11, 0

Conread position: 125-370
Cow position: chr11:4734769-4735014 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 21, 11

Conread position: 125-370
Cow position: chr11:5895363-5895118 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 21, 11

Conread position: 125-370
Cow position: chr11:41269842-41269597 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 21, 11

Conread position: 125-370
Cow position: chr11:75222483-75222728 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 21, 11

Conread position: 125-490
Cow position: chr11:77240952-77241327 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 243
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 129, 251

Conread position: 125-490
Cow position: chr11:83196092-83196455 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 240
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 185, 132

Conread position: 126-272
Cow position: chr11:41804814-41804960 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 20, 10

Conread position: 126-291
Cow position: chr11:18092090-18091925 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 149, 79

Conread position: 126-345
Cow position: chr11:60699422-60699638 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 147
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 154, 0

Conread position: 126-348
Cow position: chr11:48167337-48167116 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 172, 0

Conread position: 126-372
Cow position: chr11:44514822-44514576 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 20, 10

Conread position: 127-288
Cow position: chr11:6325555-6325395 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 136
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 127-346
Cow position: chr11:55487412-55487628 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 163, 108

Conread position: 128-289
Cow position: chr11:63434693-63434533 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 128-324
Cow position: chr11:76606283-76606475 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 154, 172

Conread position: 128-345
Cow position: chr11:83763431-83763646 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 153, 170

Conread position: 128-346
Cow position: chr11:18612791-18612573 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 11, 36

Conread position: 128-346
Cow position: chr11:65970044-65970266 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 173

Conread position: 128-348
Cow position: chr11:3797003-3797223 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 128-370
Cow position: chr11:68327459-68327215 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 162, 107

Conread position: 128-372
Cow position: chr11:13690703-13690454 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 149

Conread position: 128-384
Cow position: chr11:1849569-1849315 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 182, 102

Conread position: 128-391
Cow position: chr11:46474098-46473829 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 176
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 127, 158

Conread position: 128-391
Cow position: chr11:54422465-54422210 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 202, 79

Conread position: 129-285
Cow position: chr11:27386745-27386589 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 129-288
Cow position: chr11:17508761-17508920 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 129-346
Cow position: chr11:26585572-26585790 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 129-349
Cow position: chr11:53147946-53147726 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 12, 152

Conread position: 129-370
Cow position: chr11:9812092-9812336 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 17, 7

Conread position: 137-346
Cow position: chr11:58684019-58683813 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 134, 15

Conread position: 138-324
Cow position: chr11:2821140-2821323 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 175, 10

Conread position: 138-491
Cow position: chr11:81174494-81174847 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 244
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 255, 154

Conread position: 139-346
Cow position: chr11:81454492-81454287 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 152

Conread position: 139-492
Cow position: chr11:71846744-71846386 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 161

Conread position: 142-288
Cow position: chr11:72757510-72757657 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 142-324
Cow position: chr11:18371822-18371652 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 97, 0

Conread position: 142-459
Cow position: chr11:24459980-24459658 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 202
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 281

Conread position: 143-247
Cow position: chr11:32960529-32960428 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 143-269
Cow position: chr11:33308312-33308186 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 143-272
Cow position: chr11:79729356-79729227 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 143-274
Cow position: chr11:24967075-24967205 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 143-278
Cow position: chr11:172360-172226 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 143-287
Cow position: chr11:81605246-81605390 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 143-288
Cow position: chr11:21371434-21371293 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 128, 37

Conread position: 143-288
Cow position: chr11:26638405-26638550 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 126
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 143-324
Cow position: chr11:39831588-39831408 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 147, 106

Conread position: 143-348
Cow position: chr11:13205995-13205791 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 137, 0

Conread position: 143-348
Cow position: chr11:20544360-20544564 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 164, 128

Conread position: 143-348
Cow position: chr11:27907165-27907366 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 143-348
Cow position: chr11:27939095-27939300 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 143-348
Cow position: chr11:30448247-30448452 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 143-349
Cow position: chr11:36309801-36309595 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 123, 115

Conread position: 143-356
Cow position: chr11:19238548-19238334 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 140, 158

Conread position: 143-373
Cow position: chr11:4474867-4474637 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 147, 156

Conread position: 143-373
Cow position: chr11:49873034-49873266 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 138, 157

Conread position: 143-373
Cow position: chr11:69443544-69443314 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 143-384
Cow position: chr11:49074677-49074444 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 158, 53

Conread position: 143-388
Cow position: chr11:25808147-25807905 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 104, 0

Conread position: 143-388
Cow position: chr11:78480408-78480651 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 157, 39

Conread position: 143-451
Cow position: chr11:55347874-55348181 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 219
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 164, 92

Conread position: 143-459
Cow position: chr11:10641131-10640820 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 209
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 245, 128

Conread position: 143-467
Cow position: chr11:43593601-43593926 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 149

Conread position: 143-467
Cow position: chr11:46692605-46692929 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 14, 157

Conread position: 143-480
Cow position: chr11:44642672-44642342 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 223
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 167, 92

Conread position: 143-502
Cow position: chr11:3833739-3833387 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 232
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 137, 150

Conread position: 144-272
Cow position: chr11:37927938-37927810 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 144-291
Cow position: chr11:3951089-3950942 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 144-348
Cow position: chr11:21437239-21437441 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 91, 0

Conread position: 144-348
Cow position: chr11:68632085-68631881 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 149, 155

Conread position: 145-285
Cow position: chr11:40055726-40055586 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 145-288
Cow position: chr11:6667719-6667576 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 145-288
Cow position: chr11:81805459-81805600 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 145-345
Cow position: chr11:61137588-61137387 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 158

Conread position: 145-348
Cow position: chr11:43375746-43375543 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 145-370
Cow position: chr11:18097958-18097733 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 145-370
Cow position: chr11:41161937-41161712 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 145-370
Cow position: chr11:57269293-57269517 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 134, 0

Conread position: 145-370
Cow position: chr11:70329484-70329709 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 99, 90

Conread position: 145-498
Cow position: chr11:80923724-80923360 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 240
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 138, 18

Conread position: 146-286
Cow position: chr11:80296311-80296444 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 146-348
Cow position: chr11:3769675-3769475 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 154, 89

Conread position: 146-388
Cow position: chr11:30879289-30879533 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 112, 155

Conread position: 147-288
Cow position: chr11:4305081-4305221 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 130, 0

Conread position: 147-346
Cow position: chr11:57047350-57047154 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 174, 145

Conread position: 148-373
Cow position: chr11:10800502-10800727 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 59

Conread position: 149-288
Cow position: chr11:5933251-5933114 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 149-323
Cow position: chr11:74738664-74738838 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 141, 156

Conread position: 149-346
Cow position: chr11:22998306-22998503 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 104, 129

Conread position: 149-349
Cow position: chr11:45282551-45282751 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 161, 153

Conread position: 149-370
Cow position: chr11:66529969-66529748 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 149-488
Cow position: chr11:31352956-31352613 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 226
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 164, 130

Conread position: 150-269
Cow position: chr11:3719656-3719771 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 150-324
Cow position: chr11:66230960-66231134 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 160, 149

Conread position: 150-346
Cow position: chr11:32194546-32194356 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 150-478
Cow position: chr11:47586731-47586404 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 105, 73

Conread position: 150-492
Cow position: chr11:5032161-5031815 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 139, 160

Conread position: 150-496
Cow position: chr11:68207232-68206882 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 102, 148

Conread position: 151-288
Cow position: chr11:37974542-37974679 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 152-322
Cow position: chr11:22016965-22016797 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 139, 127

Conread position: 152-370
Cow position: chr11:60778149-60778367 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 152-372
Cow position: chr11:80820381-80820161 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 161, 150

Conread position: 152-381
Cow position: chr11:35059171-35058942 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 152-387
Cow position: chr11:29608546-29608318 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 152-497
Cow position: chr11:20601857-20602186 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 158, 147

Conread position: 154-290
Cow position: chr11:39994499-39994365 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 154-370
Cow position: chr11:36202853-36203069 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 127, 177

Conread position: 154-391
Cow position: chr11:29802934-29802708 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 155-308
Cow position: chr11:55839281-55839434 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 155-348
Cow position: chr11:14491789-14491596 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 155-364
Cow position: chr11:5197454-5197248 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 80, 0

Conread position: 155-370
Cow position: chr11:8428104-8428330 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 155

Conread position: 155-370
Cow position: chr11:10872134-10872350 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 195, 0

Conread position: 155-370
Cow position: chr11:56051375-56051590 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 158-281
Cow position: chr11:4726313-4726433 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 158-288
Cow position: chr11:5075587-5075457 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 158-324
Cow position: chr11:7460956-7460791 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 94, 77

Conread position: 158-370
Cow position: chr11:74389627-74389839 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 158-373
Cow position: chr11:10875646-10875861 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 152, 144

Conread position: 158-374
Cow position: chr11:5328417-5328634 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 124

Conread position: 158-459
Cow position: chr11:62490058-62490355 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 191
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 159-324
Cow position: chr11:81913926-81914097 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 49, 147

Conread position: 160-370
Cow position: chr11:6304482-6304272 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 160-370
Cow position: chr11:52475562-52475352 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 130, 139

Conread position: 161-275
Cow position: chr11:32956287-32956171 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 161-288
Cow position: chr11:2091974-2092101 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 161-288
Cow position: chr11:3271992-3272118 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 161-346
Cow position: chr11:66308031-66307846 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 141, 148

Conread position: 161-370
Cow position: chr11:12372664-12372873 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 161-370
Cow position: chr11:36201557-36201766 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 162-379
Cow position: chr11:71391973-71391765 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 162-467
Cow position: chr11:33256092-33255784 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 202
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 250, 21

Conread position: 163-497
Cow position: chr11:70484234-70483894 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 223
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 40, 140

Conread position: 164-341
Cow position: chr11:6633018-6633195 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 126, 132

Conread position: 166-346
Cow position: chr11:50718441-50718621 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 127, 139

Conread position: 166-368
Cow position: chr11:5224737-5224939 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 166-373
Cow position: chr11:31437367-31437160 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 168-491
Cow position: chr11:16910735-16910404 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 216
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 103, 0

Conread position: 169-369
Cow position: chr11:7555526-7555726 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 169-483
Cow position: chr11:53130450-53130761 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 122, 67

Conread position: 170-284
Cow position: chr11:71493706-71493594 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 170-346
Cow position: chr11:54595559-54595734 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 120, 83

Conread position: 170-388
Cow position: chr11:18912899-18913116 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 149
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 43, 76

Conread position: 171-348
Cow position: chr11:4323003-4323180 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 139, 131

Conread position: 171-348
Cow position: chr11:5425197-5425374 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 171-370
Cow position: chr11:54303144-54303343 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 171-370
Cow position: chr11:54304510-54304709 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 171-381
Cow position: chr11:44870425-44870219 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 172-370
Cow position: chr11:71705765-71705568 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 124, 0

Conread position: 172-459
Cow position: chr11:38235875-38236166 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 192
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 83, 133

Conread position: 173-347
Cow position: chr11:37563100-37563280 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 88, 169

Conread position: 173-370
Cow position: chr11:1133696-1133499 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 135
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 175-344
Cow position: chr11:34915416-34915584 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 85, 14

Conread position: 175-370
Cow position: chr11:24145759-24145954 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 175-370
Cow position: chr11:36198663-36198858 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 176-348
Cow position: chr11:37472335-37472507 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 131, 125

Conread position: 176-370
Cow position: chr11:3721671-3721863 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 117, 0

Conread position: 176-370
Cow position: chr11:4317208-4317014 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 176-370
Cow position: chr11:65591519-65591713 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 176-479
Cow position: chr11:34615910-34616213 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 134, 123

Conread position: 176-483
Cow position: chr11:35684857-35684546 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 104, 124

Conread position: 177-477
Cow position: chr11:865939-866244 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 200
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 267

Conread position: 179-370
Cow position: chr11:11230960-11230769 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 179-480
Cow position: chr11:54333977-54334280 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 69, 103

Conread position: 181-269
Cow position: chr11:39056383-39056471 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 77
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 181-370
Cow position: chr11:27047925-27048110 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 181-370
Cow position: chr11:75285075-75284886 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 182-278
Cow position: chr11:64046455-64046551 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 184-288
Cow position: chr11:53925411-53925515 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 184-370
Cow position: chr11:52895654-52895840 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 184-379
Cow position: chr11:41809827-41809633 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 126, 108

Conread position: 186-491
Cow position: chr11:41812260-41811956 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 208
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 127, 116

Conread position: 187-287
Cow position: chr11:70601448-70601349 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 187-386
Cow position: chr11:81279149-81279348 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 187-456
Cow position: chr11:64090433-64090164 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 175
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 224, 64

Conread position: 190-467
Cow position: chr11:51299950-51299668 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 92, 0

Conread position: 191-288
Cow position: chr11:67848032-67847936 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 192-388
Cow position: chr11:63065316-63065507 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 118, 34

Conread position: 193-349
Cow position: chr11:46451277-46451431 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 194-370
Cow position: chr11:36192961-36193136 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 194-370
Cow position: chr11:44004509-44004684 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 194-370
Cow position: chr11:49011710-49011534 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 194-374
Cow position: chr11:36899626-36899447 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 113, 104

Conread position: 197-288
Cow position: chr11:30476719-30476810 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 197-370
Cow position: chr11:24731593-24731766 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 197-374
Cow position: chr11:75286745-75286570 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 197-473
Cow position: chr11:35275958-35276240 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 186
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 59, 169

Conread position: 199-285
Cow position: chr11:955029-955115 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 203-370
Cow position: chr11:44834271-44834438 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 211-525
Cow position: chr11:68910176-68909859 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 214
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 25

Show alignments to all cow chromosomes.