Cow genome map

Conread name: Ss1.1-MPL-MPL384_8_I21.5

Conread position: 1-132
Cow position: chr21:24947556-24947425 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-249
Cow position: chr21:21000506-21000253 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 76

Conread position: 1-255
Cow position: chr21:4277053-4276807 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 240, 76

Conread position: 1-381
Cow position: chr21:32447092-32447471 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 2-121
Cow position: chr21:13358150-13358268 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 2-122
Cow position: chr21:23489783-23489663 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-193
Cow position: chr21:25674399-25674595 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 122, 141

Conread position: 2-210
Cow position: chr21:33727665-33727877 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 145, 49

Conread position: 2-230
Cow position: chr21:6713210-6712978 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 117, 214

Conread position: 2-231
Cow position: chr21:19436853-19436619 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 132, 111

Conread position: 2-240
Cow position: chr21:9363494-9363250 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 72, 65

Conread position: 2-243
Cow position: chr21:8420219-8420456 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 43, 128

Conread position: 2-246
Cow position: chr21:6619495-6619250 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 132, 26

Conread position: 2-246
Cow position: chr21:28839851-28840090 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 131, 71

Conread position: 2-246
Cow position: chr21:36995636-36995398 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 84, 26

Conread position: 2-248
Cow position: chr21:1736214-1735967 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 126, 48

Conread position: 2-255
Cow position: chr21:20575910-20575652 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 122, 213

Conread position: 2-255
Cow position: chr21:37342304-37342058 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 49, 0

Conread position: 2-256
Cow position: chr21:45354987-45355247 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 132, 0

Conread position: 2-259
Cow position: chr21:45781857-45781601 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 113, 121

Conread position: 2-267
Cow position: chr21:446607-446872 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 131, 206

Conread position: 2-269
Cow position: chr21:34235961-34236227 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 55, 71

Conread position: 2-269
Cow position: chr21:49662871-49662600 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 196

Conread position: 2-279
Cow position: chr21:21027338-21027626 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 185

Conread position: 2-285
Cow position: chr21:45780717-45780443 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 130, 65

Conread position: 2-285
Cow position: chr21:45792462-45792733 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 155, 29

Conread position: 2-287
Cow position: chr21:7666506-7666221 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-288
Cow position: chr21:13159694-13159981 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 210
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 132, 39

Conread position: 2-288
Cow position: chr21:15742553-15742255 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 2-288
Cow position: chr21:39693902-39694189 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 130, 82

Conread position: 2-289
Cow position: chr21:39723052-39723342 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 202
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 100, 75

Conread position: 2-291
Cow position: chr21:24297210-24296925 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 2-324
Cow position: chr21:2847487-2847158 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 232
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 101, 65

Conread position: 2-335
Cow position: chr21:46292539-46292865 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 226
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 120, 47

Conread position: 2-343
Cow position: chr21:30202457-30202803 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 233
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 72

Conread position: 2-344
Cow position: chr21:1803204-1802860 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 229
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 137, 126

Conread position: 2-345
Cow position: chr21:12465900-12466249 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 2-346
Cow position: chr21:4123763-4123419 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 227
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 90, 46

Conread position: 2-346
Cow position: chr21:20234728-20234381 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 238
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 69, 145

Conread position: 2-346
Cow position: chr21:24086029-24085677 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 229
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 123, 65

Conread position: 2-346
Cow position: chr21:25297361-25297703 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 226
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 124, 239

Conread position: 2-346
Cow position: chr21:30158928-30158577 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 232
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 72, 263

Conread position: 2-346
Cow position: chr21:31836333-31835986 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 243
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 75, 121

Conread position: 2-346
Cow position: chr21:32814267-32813916 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 237
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 77, 261

Conread position: 2-346
Cow position: chr21:36399276-36399612 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 117, 83

Conread position: 2-346
Cow position: chr21:36657119-36657467 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 252

Conread position: 2-346
Cow position: chr21:37191684-37191346 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 229
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 126, 97

Conread position: 2-346
Cow position: chr21:37352861-37352527 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 131

Conread position: 2-346
Cow position: chr21:42634112-42633755 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 238
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 106, 98

Conread position: 2-346
Cow position: chr21:44331741-44331393 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 174

Conread position: 2-346
Cow position: chr21:44804706-44804366 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 247
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 47, 24

Conread position: 2-346
Cow position: chr21:46054193-46054533 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 202, 109

Conread position: 2-348
Cow position: chr21:24698027-24698386 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 302

Conread position: 2-355
Cow position: chr21:18052750-18052398 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 239
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 70, 250

Conread position: 2-356
Cow position: chr21:25475681-25476035 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 173

Conread position: 2-369
Cow position: chr21:13439807-13440156 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 241
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 136, 23

Conread position: 2-384
Cow position: chr21:25603636-25603256 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 253
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 134, 65

Conread position: 2-387
Cow position: chr21:684038-684415 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 134

Conread position: 2-388
Cow position: chr21:29942546-29942938 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 189

Conread position: 3-132
Cow position: chr21:33620311-33620442 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 3-134
Cow position: chr21:4718939-4718808 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-134
Cow position: chr21:18712362-18712493 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-152
Cow position: chr21:3381709-3381558 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 3-153
Cow position: chr21:13763106-13763252 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 3-153
Cow position: chr21:17694917-17694766 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 3-153
Cow position: chr21:21971378-21971229 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 3-161
Cow position: chr21:39469884-39469726 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 143, 133

Conread position: 3-174
Cow position: chr21:28734652-28734485 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 3-181
Cow position: chr21:18784204-18784028 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 50

Conread position: 3-181
Cow position: chr21:29955697-29955519 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 3-185
Cow position: chr21:2537298-2537118 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 122, 0

Conread position: 3-189
Cow position: chr21:3586019-3585839 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 3-191
Cow position: chr21:31039954-31039767 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 133, 0

Conread position: 3-191
Cow position: chr21:43266612-43266424 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 143, 133

Conread position: 3-192
Cow position: chr21:33350254-33350441 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 80, 0

Conread position: 3-196
Cow position: chr21:17724220-17724412 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 191, 68

Conread position: 3-201
Cow position: chr21:19976182-19976379 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 3-204
Cow position: chr21:35437801-35437598 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 63, 137

Conread position: 3-205
Cow position: chr21:42842294-42842089 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 125, 84

Conread position: 3-206
Cow position: chr21:47532584-47532796 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 59, 0

Conread position: 3-208
Cow position: chr21:21908028-21907823 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-223
Cow position: chr21:2293312-2293091 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 161

Conread position: 3-223
Cow position: chr21:13752164-13752383 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 25, 0

Conread position: 3-223
Cow position: chr21:38450131-38449905 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 200, 0

Conread position: 3-225
Cow position: chr21:28057144-28057371 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 119, 36

Conread position: 3-225
Cow position: chr21:44264901-44265126 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 140, 77

Conread position: 3-228
Cow position: chr21:18828784-18828561 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 8, 0

Conread position: 3-230
Cow position: chr21:29015610-29015381 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 154
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 76, 0

Conread position: 3-231
Cow position: chr21:27124840-27124630 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 83, 0

Conread position: 3-231
Cow position: chr21:46143272-46143503 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 63, 162

Conread position: 3-232
Cow position: chr21:42390651-42390418 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 130, 202

Conread position: 3-233
Cow position: chr21:23341532-23341763 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-233
Cow position: chr21:33107613-33107383 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-233
Cow position: chr21:45331420-45331208 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 3-243
Cow position: chr21:34835904-34835663 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 140

Conread position: 3-248
Cow position: chr21:2261130-2260876 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 0

Conread position: 3-248
Cow position: chr21:23283283-23283037 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 30, 242

Conread position: 3-248
Cow position: chr21:25799916-25800165 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 133, 27

Conread position: 3-251
Cow position: chr21:10000738-10000490 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-251
Cow position: chr21:13303076-13303328 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 44, 160

Conread position: 3-253
Cow position: chr21:2927681-2927432 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 64

Conread position: 3-254
Cow position: chr21:12802232-12801978 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 3-255
Cow position: chr21:3765886-3765637 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 3-255
Cow position: chr21:7156254-7156512 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 76, 181

Conread position: 3-255
Cow position: chr21:25473053-25473304 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 3-255
Cow position: chr21:29484516-29484751 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 223, 119

Conread position: 3-255
Cow position: chr21:47465813-47465578 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 168, 0

Conread position: 3-259
Cow position: chr21:3047216-3047471 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 3-259
Cow position: chr21:31661607-31661868 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 65, 161

Conread position: 3-259
Cow position: chr21:37706863-37706612 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 0

Conread position: 3-259
Cow position: chr21:44861711-44861448 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 3-260
Cow position: chr21:28210737-28210993 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 3-261
Cow position: chr21:1463784-1464042 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-262
Cow position: chr21:26736759-26736493 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 84, 64

Conread position: 3-264
Cow position: chr21:297274-297531 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 0

Conread position: 3-265
Cow position: chr21:27619639-27619377 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-265
Cow position: chr21:39508089-39507828 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 41, 27

Conread position: 3-267
Cow position: chr21:27146654-27146388 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 0

Conread position: 3-267
Cow position: chr21:32359014-32358750 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-268
Cow position: chr21:44074012-44074261 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 85, 0

Conread position: 3-269
Cow position: chr21:16889963-16889697 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-269
Cow position: chr21:26557499-26557241 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 62

Conread position: 3-270
Cow position: chr21:1590812-1591086 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 37, 46

Conread position: 3-270
Cow position: chr21:13257221-13257488 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 131

Conread position: 3-272
Cow position: chr21:3496625-3496357 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 74

Conread position: 3-272
Cow position: chr21:4905418-4905147 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 3-274
Cow position: chr21:27623457-27623725 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 72, 91

Conread position: 3-274
Cow position: chr21:31276277-31276543 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 53

Conread position: 3-280
Cow position: chr21:32297955-32297674 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 3-282
Cow position: chr21:13764531-13764804 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 124, 25

Conread position: 3-282
Cow position: chr21:22334749-22335028 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 29, 40

Conread position: 3-282
Cow position: chr21:32560087-32559807 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 3-284
Cow position: chr21:2935198-2934922 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 73, 18

Conread position: 3-284
Cow position: chr21:3236081-3236364 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 18

Conread position: 3-284
Cow position: chr21:4585795-4585519 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 3-284
Cow position: chr21:8126234-8125962 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 270, 74

Conread position: 3-284
Cow position: chr21:13089921-13089650 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 109

Conread position: 3-284
Cow position: chr21:36756159-36756439 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 220

Conread position: 3-285
Cow position: chr21:45596-45879 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 3-285
Cow position: chr21:29769713-29769421 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 74, 35

Conread position: 3-285
Cow position: chr21:36620601-36620312 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 116, 64

Conread position: 3-287
Cow position: chr21:17794653-17794361 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 32, 18

Conread position: 3-288
Cow position: chr21:363204-363491 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 3-288
Cow position: chr21:3920661-3920375 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 0

Conread position: 3-288
Cow position: chr21:6697540-6697256 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 64

Conread position: 3-288
Cow position: chr21:11676714-11676416 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 208
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 121, 65

Conread position: 3-288
Cow position: chr21:13163480-13163749 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 248, 18

Conread position: 3-288
Cow position: chr21:13735281-13734996 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-288
Cow position: chr21:18935324-18935597 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 27

Conread position: 3-288
Cow position: chr21:19237269-19237552 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 3-288
Cow position: chr21:19350980-19350696 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 64

Conread position: 3-288
Cow position: chr21:19766399-19766690 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 3-288
Cow position: chr21:19957783-19958062 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 69, 25

Conread position: 3-288
Cow position: chr21:33579749-33580023 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 74

Conread position: 3-288
Cow position: chr21:36127112-36127390 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 193
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 248, 64

Conread position: 3-288
Cow position: chr21:45842122-45841835 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 0

Conread position: 3-289
Cow position: chr21:5649458-5649743 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 51

Conread position: 3-290
Cow position: chr21:14727607-14727886 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 3-290
Cow position: chr21:17713865-17714152 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 277, 64

Conread position: 3-290
Cow position: chr21:19974301-19974586 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 242, 148

Conread position: 3-290
Cow position: chr21:20107199-20106907 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 126, 0

Conread position: 3-291
Cow position: chr21:11353373-11353661 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-291
Cow position: chr21:34899804-34899515 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 134

Conread position: 3-291
Cow position: chr21:42917674-42917962 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-291
Cow position: chr21:47978148-47978435 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-296
Cow position: chr21:6051028-6051328 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 281

Conread position: 3-317
Cow position: chr21:31252879-31253196 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 64

Conread position: 3-322
Cow position: chr21:12365938-12366257 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-322
Cow position: chr21:14760135-14760450 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 230
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 97, 43

Conread position: 3-323
Cow position: chr21:13300699-13301023 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 20

Conread position: 3-324
Cow position: chr21:5237957-5238267 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 0

Conread position: 3-324
Cow position: chr21:6623700-6624014 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 114

Conread position: 3-324
Cow position: chr21:20549371-20549039 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 160

Conread position: 3-324
Cow position: chr21:36297048-36297350 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 56

Conread position: 3-324
Cow position: chr21:44657869-44658189 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 0

Conread position: 3-325
Cow position: chr21:2906350-2906025 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 218
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 122, 258

Conread position: 3-325
Cow position: chr21:42443056-42442735 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 0

Conread position: 3-345
Cow position: chr21:13189985-13190329 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 228
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 71, 273

Conread position: 3-346
Cow position: chr21:2871165-2870822 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-346
Cow position: chr21:2904912-2904566 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 278

Conread position: 3-346
Cow position: chr21:4098440-4098769 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 239, 101

Conread position: 3-346
Cow position: chr21:13275432-13275775 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 217
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 112, 100

Conread position: 3-346
Cow position: chr21:14121596-14121254 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 230
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 119, 18

Conread position: 3-346
Cow position: chr21:31975023-31975372 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 247

Conread position: 3-346
Cow position: chr21:38900335-38900668 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 78

Conread position: 3-346
Cow position: chr21:47823721-47823378 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 251

Conread position: 3-347
Cow position: chr21:48638192-48637851 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 3-348
Cow position: chr21:81624-81966 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 74

Conread position: 3-348
Cow position: chr21:725337-724996 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 125

Conread position: 3-348
Cow position: chr21:3923792-3924138 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 134

Conread position: 3-348
Cow position: chr21:4998934-4998591 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 283

Conread position: 3-348
Cow position: chr21:6063634-6063991 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 142, 133

Conread position: 3-348
Cow position: chr21:7038312-7037967 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr21:7524998-7525343 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr21:7597390-7597038 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr21:10756792-10757137 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr21:27230239-27229899 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 3-348
Cow position: chr21:30250654-30250313 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 199

Conread position: 3-348
Cow position: chr21:34738145-34738494 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 144

Conread position: 3-348
Cow position: chr21:38691745-38692085 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 123

Conread position: 3-348
Cow position: chr21:38917786-38918110 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 3-348
Cow position: chr21:44826316-44825988 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 242
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 37, 187

Conread position: 3-349
Cow position: chr21:2514725-2515068 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-349
Cow position: chr21:44281282-44280934 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 3-366
Cow position: chr21:47429221-47429583 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-367
Cow position: chr21:31435908-31436262 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 109

Conread position: 3-369
Cow position: chr21:34909743-34910108 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 119

Conread position: 3-370
Cow position: chr21:48024-48393 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 3-370
Cow position: chr21:451755-452122 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr21:750289-750656 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr21:2472896-2472529 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr21:4473467-4473103 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 133

Conread position: 3-370
Cow position: chr21:4898092-4897735 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 61

Conread position: 3-370
Cow position: chr21:5641957-5641590 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr21:5857585-5857219 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr21:9209188-9209554 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 45

Conread position: 3-370
Cow position: chr21:10436721-10437087 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 119

Conread position: 3-370
Cow position: chr21:11143969-11143602 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr21:11292587-11292956 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 135

Conread position: 3-370
Cow position: chr21:11509818-11510184 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 3-370
Cow position: chr21:16575566-16575199 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr21:18574395-18574762 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr21:20370246-20370613 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr21:21103599-21103967 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 0

Conread position: 3-370
Cow position: chr21:21623965-21624332 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr21:21909906-21910273 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr21:22100319-22099952 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr21:23329462-23329094 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 134

Conread position: 3-370
Cow position: chr21:25480152-25480507 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 60

Conread position: 3-370
Cow position: chr21:25598545-25598911 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr21:26628648-26629015 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr21:26756842-26756478 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 88

Conread position: 3-370
Cow position: chr21:26854812-26854445 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr21:26875472-26875842 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr21:27147671-27147306 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 43

Conread position: 3-370
Cow position: chr21:29954771-29955138 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr21:30571199-30570832 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr21:30655520-30655887 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr21:30966062-30965695 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 300

Conread position: 3-370
Cow position: chr21:31948443-31948810 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr21:31950294-31950661 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr21:33709619-33709252 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr21:33770558-33770925 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr21:33901307-33901676 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr21:34074518-34074885 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 232

Conread position: 3-370
Cow position: chr21:34900556-34900923 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr21:36781006-36781368 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr21:36892351-36891984 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr21:37924057-37924435 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 140

Conread position: 3-370
Cow position: chr21:38848919-38848552 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr21:39429500-39429866 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 3-370
Cow position: chr21:39486393-39486027 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 3-370
Cow position: chr21:40479142-40479509 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr21:41795844-41795476 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 134

Conread position: 3-370
Cow position: chr21:44122606-44122973 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr21:47140142-47139775 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-373
Cow position: chr21:10075383-10075015 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-373
Cow position: chr21:18979304-18978927 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 196

Conread position: 3-373
Cow position: chr21:19614125-19614494 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 108

Conread position: 3-373
Cow position: chr21:19626829-19626458 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-373
Cow position: chr21:29423939-29424307 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-378
Cow position: chr21:7047304-7046934 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 49

Conread position: 3-384
Cow position: chr21:5595214-5595591 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 233

Conread position: 3-388
Cow position: chr21:24130637-24131012 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 0

Conread position: 3-388
Cow position: chr21:25764186-25764570 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 130

Conread position: 3-388
Cow position: chr21:28599322-28599708 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 159

Conread position: 3-388
Cow position: chr21:42540670-42540284 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 145

Conread position: 3-391
Cow position: chr21:34181546-34181929 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-393
Cow position: chr21:17433700-17433315 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 25

Conread position: 3-450
Cow position: chr21:24606947-24607386 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 125

Conread position: 3-459
Cow position: chr21:28512092-28512533 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 229

Conread position: 3-461
Cow position: chr21:20925954-20925501 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 201

Conread position: 3-477
Cow position: chr21:34658589-34659059 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 94

Conread position: 3-478
Cow position: chr21:28429013-28429469 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 39

Conread position: 3-479
Cow position: chr21:18289215-18289690 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 130

Conread position: 3-479
Cow position: chr21:26744406-26743908 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 311

Conread position: 3-480
Cow position: chr21:27863969-27863488 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 290

Conread position: 3-483
Cow position: chr21:912410-911936 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 193

Conread position: 3-483
Cow position: chr21:12153686-12154164 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 88

Conread position: 3-483
Cow position: chr21:13704134-13703654 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 307
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 245, 122

Conread position: 3-483
Cow position: chr21:31691047-31691513 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 101

Conread position: 3-483
Cow position: chr21:39401145-39401625 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 117

Conread position: 3-489
Cow position: chr21:5898859-5898364 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 332
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 124, 191

Conread position: 3-489
Cow position: chr21:33209752-33210240 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 48

Conread position: 3-490
Cow position: chr21:36163405-36162923 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 72

Conread position: 3-491
Cow position: chr21:27743292-27743787 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 300

Conread position: 3-491
Cow position: chr21:28617152-28617628 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 232

Conread position: 3-492
Cow position: chr21:13897739-13898225 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 250

Conread position: 3-496
Cow position: chr21:33997671-33997185 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 321
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 143, 28

Conread position: 3-497
Cow position: chr21:22855773-22856263 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 166

Conread position: 3-509
Cow position: chr21:29069767-29069276 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 72

Conread position: 3-519
Cow position: chr21:642897-643386 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 107

Conread position: 4-153
Cow position: chr21:18939834-18939685 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 68, 81

Conread position: 4-180
Cow position: chr21:11312589-11312765 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 70, 92

Conread position: 4-217
Cow position: chr21:36982588-36982807 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 21, 47

Conread position: 4-255
Cow position: chr21:31863-32113 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 4-255
Cow position: chr21:10516230-10515983 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 67, 105

Conread position: 4-255
Cow position: chr21:30151073-30150816 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 56, 222

Conread position: 4-256
Cow position: chr21:46132444-46132194 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 222

Conread position: 4-273
Cow position: chr21:22464341-22464611 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 4-278
Cow position: chr21:1752272-1752545 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 132

Conread position: 4-282
Cow position: chr21:43866-44146 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 230

Conread position: 4-284
Cow position: chr21:20262784-20262502 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 4-286
Cow position: chr21:17452459-17452180 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 38

Conread position: 4-288
Cow position: chr21:3173669-3173958 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 124, 73

Conread position: 4-288
Cow position: chr21:9968295-9968007 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 184
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 122, 219

Conread position: 4-288
Cow position: chr21:10514365-10514643 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 4-290
Cow position: chr21:21967036-21967320 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 138

Conread position: 4-344
Cow position: chr21:31576064-31576406 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 29

Conread position: 4-344
Cow position: chr21:34617933-34618279 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 236
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 122, 300

Conread position: 4-346
Cow position: chr21:2404534-2404879 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 230
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 124, 52

Conread position: 4-346
Cow position: chr21:11327062-11326723 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 218
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 108, 144

Conread position: 4-346
Cow position: chr21:22140790-22140445 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 281

Conread position: 4-347
Cow position: chr21:48291477-48291140 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 235
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 131, 50

Conread position: 4-348
Cow position: chr21:37122518-37122155 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 249
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 123, 315

Conread position: 4-349
Cow position: chr21:2366899-2367237 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 44

Conread position: 4-459
Cow position: chr21:4189393-4189840 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 10

Conread position: 4-468
Cow position: chr21:21480627-21480167 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 0

Conread position: 4-478
Cow position: chr21:46912095-46912566 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 151

Conread position: 5-131
Cow position: chr21:1582400-1582274 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr21:22724444-22724318 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-159
Cow position: chr21:19965478-19965630 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 5-173
Cow position: chr21:35211091-35210924 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 55

Conread position: 5-180
Cow position: chr21:13388688-13388871 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 5-186
Cow position: chr21:14383768-14383948 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 121, 32

Conread position: 5-186
Cow position: chr21:16167289-16167103 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 129, 48

Conread position: 5-189
Cow position: chr21:8896637-8896442 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 64, 0

Conread position: 5-192
Cow position: chr21:17084917-17085102 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 113, 90

Conread position: 5-193
Cow position: chr21:34141870-34141677 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 125, 114

Conread position: 5-195
Cow position: chr21:39404015-39403825 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 129, 136

Conread position: 5-200
Cow position: chr21:4812451-4812256 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 5-201
Cow position: chr21:6365750-6365951 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 5-210
Cow position: chr21:5879280-5879069 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 123, 48

Conread position: 5-214
Cow position: chr21:33307843-33308057 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 135, 51

Conread position: 5-224
Cow position: chr21:28026679-28026898 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 30

Conread position: 5-225
Cow position: chr21:29855227-29855447 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-228
Cow position: chr21:648587-648359 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 31, 50

Conread position: 5-244
Cow position: chr21:16292969-16293218 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 86, 23

Conread position: 5-246
Cow position: chr21:39640868-39641106 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 133, 43

Conread position: 5-247
Cow position: chr21:26831347-26831581 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 120, 16

Conread position: 5-248
Cow position: chr21:1058354-1058603 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 137, 9

Conread position: 5-248
Cow position: chr21:21033141-21033389 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 121, 175

Conread position: 5-250
Cow position: chr21:28768882-28768638 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-254
Cow position: chr21:39360425-39360183 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 121, 76

Conread position: 5-255
Cow position: chr21:10777404-10777152 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 128, 43

Conread position: 5-255
Cow position: chr21:20910552-20910308 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 55, 131

Conread position: 5-255
Cow position: chr21:28989166-28989429 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 140, 7

Conread position: 5-257
Cow position: chr21:36956511-36956766 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 131, 0

Conread position: 5-259
Cow position: chr21:10045784-10046045 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 13, 138

Conread position: 5-259
Cow position: chr21:40128460-40128208 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 62

Conread position: 5-260
Cow position: chr21:44219782-44220042 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 256

Conread position: 5-261
Cow position: chr21:39583927-39583675 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 75

Conread position: 5-269
Cow position: chr21:18601221-18601477 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 5-269
Cow position: chr21:19050932-19050670 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 128, 25

Conread position: 5-275
Cow position: chr21:40726394-40726118 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 176
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 5-286
Cow position: chr21:17412739-17412458 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-288
Cow position: chr21:612214-611933 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 5-288
Cow position: chr21:1765653-1765366 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 233

Conread position: 5-288
Cow position: chr21:10292390-10292109 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 203, 169

Conread position: 5-288
Cow position: chr21:12313854-12314146 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 202
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 114, 263

Conread position: 5-288
Cow position: chr21:13532340-13532052 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 194
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 93, 18

Conread position: 5-288
Cow position: chr21:15584847-15584566 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 62

Conread position: 5-288
Cow position: chr21:22856733-22857013 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 5-288
Cow position: chr21:30595208-30594916 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 43

Conread position: 5-288
Cow position: chr21:33415238-33414956 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 0

Conread position: 5-288
Cow position: chr21:47767826-47767547 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 5-289
Cow position: chr21:13750942-13751223 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 189
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 209, 47

Conread position: 5-289
Cow position: chr21:44193397-44193118 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 190
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 117, 56

Conread position: 5-290
Cow position: chr21:17482311-17482597 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 0

Conread position: 5-290
Cow position: chr21:18934481-18934762 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 204
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 279, 70

Conread position: 5-291
Cow position: chr21:31512388-31512103 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 0

Conread position: 5-291
Cow position: chr21:42558657-42558943 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-305
Cow position: chr21:27376004-27376301 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 5-324
Cow position: chr21:10571153-10571474 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 0

Conread position: 5-328
Cow position: chr21:168093-167769 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 295

Conread position: 5-346
Cow position: chr21:10624303-10623978 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 238
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 43, 0

Conread position: 5-348
Cow position: chr21:150029-150372 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-348
Cow position: chr21:4282311-4281972 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 231

Conread position: 5-348
Cow position: chr21:4732664-4732321 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-348
Cow position: chr21:26835740-26835399 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 62

Conread position: 5-348
Cow position: chr21:27287858-27288202 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 5-349
Cow position: chr21:23606224-23606571 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 83

Conread position: 5-356
Cow position: chr21:37299020-37299373 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 47

Conread position: 5-357
Cow position: chr21:4559190-4558838 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 95

Conread position: 5-364
Cow position: chr21:7815180-7814799 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 207

Conread position: 5-364
Cow position: chr21:28442289-28442656 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 131

Conread position: 5-367
Cow position: chr21:9201740-9202101 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 244
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 119, 181

Conread position: 5-372
Cow position: chr21:10854139-10854508 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 0

Conread position: 5-372
Cow position: chr21:17208049-17208407 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 62

Conread position: 5-373
Cow position: chr21:1780907-1781272 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 5-373
Cow position: chr21:23293601-23293236 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 5-373
Cow position: chr21:26399902-26399534 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 288

Conread position: 5-373
Cow position: chr21:48262679-48263052 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 258
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 21, 242

Conread position: 5-379
Cow position: chr21:4279188-4279559 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 5-380
Cow position: chr21:34251980-34251607 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 5-381
Cow position: chr21:1196420-1196796 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-381
Cow position: chr21:17144699-17145077 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 5-381
Cow position: chr21:33316482-33316115 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 5-381
Cow position: chr21:34684906-34685279 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 30

Conread position: 5-386
Cow position: chr21:5840726-5841106 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 5-386
Cow position: chr21:33832094-33831716 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 21

Conread position: 5-388
Cow position: chr21:1483059-1483425 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 229
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 41, 19

Conread position: 5-453
Cow position: chr21:47649224-47649670 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 378, 131

Conread position: 5-455
Cow position: chr21:30566574-30567022 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 90

Conread position: 5-459
Cow position: chr21:2877959-2877503 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 378, 0

Conread position: 5-459
Cow position: chr21:6765147-6764692 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 62

Conread position: 5-459
Cow position: chr21:8981572-8981121 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 65

Conread position: 5-459
Cow position: chr21:34301458-34301924 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 5-467
Cow position: chr21:13111244-13110781 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 387, 454

Conread position: 5-467
Cow position: chr21:27613818-27614303 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 320
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 61, 319

Conread position: 5-467
Cow position: chr21:48459316-48458848 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 5-483
Cow position: chr21:34391413-34390944 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 202

Conread position: 5-495
Cow position: chr21:28477178-28477668 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 447, 285

Conread position: 5-509
Cow position: chr21:5021021-5021528 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 382, 471

Conread position: 5-546
Cow position: chr21:32929670-32929122 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 143
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 127, 0

Conread position: 6-101
Cow position: chr21:16188702-16188607 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-132
Cow position: chr21:23500458-23500331 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 6-134
Cow position: chr21:665644-665516 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-170
Cow position: chr21:2767950-2767786 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 6-217
Cow position: chr21:25813546-25813333 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 137, 53

Conread position: 6-224
Cow position: chr21:20243739-20243516 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 64, 0

Conread position: 6-233
Cow position: chr21:5634570-5634802 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 134, 0

Conread position: 6-240
Cow position: chr21:28625663-28625895 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 75, 0

Conread position: 6-252
Cow position: chr21:13585565-13585320 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 192
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 65, 159

Conread position: 6-255
Cow position: chr21:11467417-11467669 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 73, 166

Conread position: 6-256
Cow position: chr21:6102769-6102521 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 45, 9

Conread position: 6-258
Cow position: chr21:3813913-3813662 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 116

Conread position: 6-266
Cow position: chr21:48531064-48531324 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-269
Cow position: chr21:44761802-44761539 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-272
Cow position: chr21:11083071-11082801 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 6-274
Cow position: chr21:26829683-26829419 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 66, 231

Conread position: 6-284
Cow position: chr21:36115899-36116162 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 132, 40

Conread position: 6-288
Cow position: chr21:15545807-15545527 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 24

Conread position: 6-288
Cow position: chr21:21216587-21216305 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-290
Cow position: chr21:30896973-30897257 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 128, 157

Conread position: 6-346
Cow position: chr21:17174697-17175038 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 207
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 54, 12

Conread position: 6-346
Cow position: chr21:19622951-19623291 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 214
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 134, 153

Conread position: 6-346
Cow position: chr21:23801557-23801228 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 228
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 304, 80

Conread position: 6-346
Cow position: chr21:30354732-30355069 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 233
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 113, 33

Conread position: 6-346
Cow position: chr21:36711747-36712092 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 258

Conread position: 6-347
Cow position: chr21:2206798-2206450 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 229
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 56, 311

Conread position: 6-348
Cow position: chr21:37517810-37517469 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 61

Conread position: 6-370
Cow position: chr21:13632444-13632807 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 93

Conread position: 6-386
Cow position: chr21:3782654-3783034 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 293

Conread position: 6-388
Cow position: chr21:26852804-26853193 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 264
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 69, 42

Conread position: 6-477
Cow position: chr21:5344238-5344683 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 45

Conread position: 7-175
Cow position: chr21:4267578-4267746 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 7-202
Cow position: chr21:14293812-14293618 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 42, 0

Conread position: 7-206
Cow position: chr21:29826494-29826289 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 53, 112

Conread position: 7-216
Cow position: chr21:7198054-7197847 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 45, 136

Conread position: 7-225
Cow position: chr21:18846268-18846055 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 161, 0

Conread position: 7-233
Cow position: chr21:28934924-28935155 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 129, 0

Conread position: 7-247
Cow position: chr21:42460217-42459984 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 157
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 7-255
Cow position: chr21:578779-578529 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 121, 77

Conread position: 7-267
Cow position: chr21:9218489-9218741 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 197
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 33, 113

Conread position: 7-277
Cow position: chr21:29214601-29214331 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 229

Conread position: 7-283
Cow position: chr21:17414965-17414700 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 7-286
Cow position: chr21:18932050-18932325 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 64, 0

Conread position: 7-287
Cow position: chr21:16118213-16117928 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 202
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 21, 191

Conread position: 7-289
Cow position: chr21:471178-471472 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 7-290
Cow position: chr21:29839721-29840002 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 30

Conread position: 7-321
Cow position: chr21:33420161-33419846 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 114

Conread position: 7-348
Cow position: chr21:17478945-17479278 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 234
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 305, 26

Conread position: 7-348
Cow position: chr21:34254724-34254386 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 7-348
Cow position: chr21:36909372-36909722 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 211

Conread position: 7-348
Cow position: chr21:43240419-43240754 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 7-372
Cow position: chr21:20588586-20588951 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 294

Conread position: 7-373
Cow position: chr21:21785532-21785166 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-384
Cow position: chr21:13395109-13395479 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 262
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 22, 67

Conread position: 7-457
Cow position: chr21:33983254-33982804 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 70

Conread position: 7-459
Cow position: chr21:4079909-4080363 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 283

Conread position: 7-496
Cow position: chr21:17417199-17416717 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 312
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 216, 69

Conread position: 8-214
Cow position: chr21:19652547-19652335 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 8-217
Cow position: chr21:38908095-38908309 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 116, 111

Conread position: 8-246
Cow position: chr21:25291558-25291801 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 120, 174

Conread position: 8-284
Cow position: chr21:32394059-32393783 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 184
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 114, 36

Conread position: 8-324
Cow position: chr21:8274621-8274317 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 228
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 113, 34

Conread position: 8-346
Cow position: chr21:19882359-19882013 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 111, 311

Conread position: 8-346
Cow position: chr21:29253331-29252997 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 232
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 117, 218

Conread position: 8-349
Cow position: chr21:37322739-37322398 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 88

Conread position: 8-349
Cow position: chr21:45263464-45263125 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 115

Conread position: 8-373
Cow position: chr21:3818667-3819029 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 8-374
Cow position: chr21:23192963-23192596 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 8-374
Cow position: chr21:28259546-28259919 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 8-388
Cow position: chr21:42527058-42527425 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 257
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 85

Conread position: 8-467
Cow position: chr21:27607807-27607343 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 131

Conread position: 8-525
Cow position: chr21:33728991-33729498 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 59

Conread position: 9-262
Cow position: chr21:8071215-8070971 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 9-288
Cow position: chr21:23683099-23683386 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 9-304
Cow position: chr21:4137290-4136999 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 200
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 113, 58

Conread position: 10-252
Cow position: chr21:18818774-18818530 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 141, 96

Conread position: 10-255
Cow position: chr21:9438335-9438586 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 61, 145

Conread position: 10-287
Cow position: chr21:30000024-29999746 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 10-297
Cow position: chr21:34757747-34757450 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 194
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 272

Conread position: 10-298
Cow position: chr21:2810555-2810259 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 123

Conread position: 10-496
Cow position: chr21:22719216-22718741 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 103

Conread position: 11-255
Cow position: chr21:12075848-12075612 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 146, 132

Conread position: 11-346
Cow position: chr21:7672681-7673026 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 286

Conread position: 11-346
Cow position: chr21:36680264-36680601 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 121, 109

Conread position: 11-349
Cow position: chr21:48484881-48484548 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 236

Conread position: 11-350
Cow position: chr21:48108287-48107965 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 130, 60

Conread position: 11-459
Cow position: chr21:44671311-44671755 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 285

Conread position: 12-284
Cow position: chr21:13070304-13070029 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 129

Conread position: 12-288
Cow position: chr21:23658100-23658380 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 199
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 117, 96

Conread position: 13-225
Cow position: chr21:29785703-29785924 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 113, 0

Conread position: 13-244
Cow position: chr21:17454966-17455195 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 13-322
Cow position: chr21:25344437-25344747 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 282

Conread position: 13-346
Cow position: chr21:39433988-39434325 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 226
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 113, 36

Conread position: 13-370
Cow position: chr21:27036339-27036696 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 123

Conread position: 14-163
Cow position: chr21:40265204-40265353 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 14-215
Cow position: chr21:24111067-24110865 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 63, 0

Conread position: 14-216
Cow position: chr21:42455234-42455442 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 103, 53

Conread position: 14-348
Cow position: chr21:2420067-2420400 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 243

Conread position: 14-459
Cow position: chr21:32535547-32535979 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 104

Conread position: 15-288
Cow position: chr21:36376895-36377173 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 133, 175

Conread position: 15-324
Cow position: chr21:2657158-2657460 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 58

Conread position: 15-346
Cow position: chr21:29704640-29704318 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 226
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 131, 21

Conread position: 16-252
Cow position: chr21:26681373-26681138 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 7, 0

Conread position: 16-268
Cow position: chr21:36394330-36394589 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 120, 244

Conread position: 16-346
Cow position: chr21:34591632-34591290 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 238
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 29, 106

Conread position: 16-352
Cow position: chr21:9940612-9940275 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 229
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 264, 117

Conread position: 16-496
Cow position: chr21:42914178-42913701 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 32

Conread position: 17-288
Cow position: chr21:22945136-22945409 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 176
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 17-348
Cow position: chr21:10263606-10263936 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 87, 42

Conread position: 17-349
Cow position: chr21:30849372-30849044 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 89

Conread position: 17-391
Cow position: chr21:14762949-14762568 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 126

Conread position: 18-310
Cow position: chr21:21406710-21406415 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 10

Conread position: 18-323
Cow position: chr21:9006149-9006452 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 105, 49

Conread position: 18-346
Cow position: chr21:14462200-14461876 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 225
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 110, 10

Conread position: 18-346
Cow position: chr21:37942124-37941789 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 225

Conread position: 19-370
Cow position: chr21:1179370-1179019 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 118

Conread position: 20-267
Cow position: chr21:28810681-28810435 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 123, 47

Conread position: 20-288
Cow position: chr21:40083372-40083642 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 180
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 102, 36

Conread position: 20-346
Cow position: chr21:4860592-4860268 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 220
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 102, 28

Conread position: 20-348
Cow position: chr21:9863056-9862729 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 229
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 111, 47

Conread position: 20-348
Cow position: chr21:27342015-27341701 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 8

Conread position: 20-388
Cow position: chr21:393590-393957 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 104

Conread position: 20-456
Cow position: chr21:7717219-7716783 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 144

Conread position: 20-496
Cow position: chr21:17434750-17434274 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 297
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 197, 32

Conread position: 22-198
Cow position: chr21:26241110-26241287 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 61, 114

Conread position: 22-288
Cow position: chr21:23028053-23028318 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 103, 25

Conread position: 22-288
Cow position: chr21:27712865-27712596 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 27

Conread position: 23-200
Cow position: chr21:49646765-49646582 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 23-347
Cow position: chr21:12506977-12507306 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 216
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 63, 275

Conread position: 23-370
Cow position: chr21:16794911-16795258 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 23-370
Cow position: chr21:30134690-30135034 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 113

Conread position: 24-225
Cow position: chr21:31661279-31661481 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 100, 13

Conread position: 24-291
Cow position: chr21:25738305-25738038 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 112

Conread position: 24-374
Cow position: chr21:33245587-33245239 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 43

Conread position: 26-256
Cow position: chr21:24418408-24418173 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 110, 41

Conread position: 26-348
Cow position: chr21:9711141-9710807 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 115, 110

Conread position: 26-496
Cow position: chr21:45866512-45866976 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 114

Conread position: 27-284
Cow position: chr21:12325616-12325869 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 40

Conread position: 27-348
Cow position: chr21:17539309-17539630 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 109

Conread position: 28-288
Cow position: chr21:13533505-13533772 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 175
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 97, 53

Conread position: 29-346
Cow position: chr21:36626653-36626337 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 219
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 96, 74

Conread position: 29-347
Cow position: chr21:17411930-17411612 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 29-348
Cow position: chr21:39700499-39700180 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 296

Conread position: 29-370
Cow position: chr21:36225325-36225665 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 30-259
Cow position: chr21:28923720-28923948 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 30

Conread position: 30-369
Cow position: chr21:41538775-41539116 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 225
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 109, 193

Conread position: 31-228
Cow position: chr21:23603723-23603919 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 112, 0

Conread position: 32-330
Cow position: chr21:11195713-11196011 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 104

Conread position: 32-370
Cow position: chr21:31039772-31039434 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 104

Conread position: 33-480
Cow position: chr21:24222958-24222510 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 58

Conread position: 34-324
Cow position: chr21:9981106-9980829 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 159, 0

Conread position: 35-233
Cow position: chr21:8686650-8686452 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 159
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 111, 101

Conread position: 35-289
Cow position: chr21:41957600-41957337 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 193
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 140, 0

Conread position: 35-324
Cow position: chr21:19702107-19702396 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 265

Conread position: 35-345
Cow position: chr21:40177967-40178282 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 90, 291

Conread position: 35-348
Cow position: chr21:37874100-37874414 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 265

Conread position: 35-370
Cow position: chr21:26633094-26632746 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 56, 115

Conread position: 35-370
Cow position: chr21:39225035-39224700 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 36-356
Cow position: chr21:33933800-33933480 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 37-248
Cow position: chr21:13159115-13159327 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 108

Conread position: 42-269
Cow position: chr21:31040849-31040620 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 42-269
Cow position: chr21:35573294-35573070 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 42-291
Cow position: chr21:40013772-40013523 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 42-349
Cow position: chr21:4035400-4035096 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 42-369
Cow position: chr21:36505646-36505320 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 94

Conread position: 42-457
Cow position: chr21:42464257-42463832 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 199

Conread position: 42-467
Cow position: chr21:2495581-2495154 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 193

Conread position: 42-500
Cow position: chr21:7564732-7564269 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 257

Conread position: 43-323
Cow position: chr21:46973544-46973255 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 116

Conread position: 44-246
Cow position: chr21:46883286-46883490 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 5, 16

Conread position: 44-468
Cow position: chr21:25382590-25383030 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 294
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 199, 287

Conread position: 46-370
Cow position: chr21:33993472-33993145 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 90

Conread position: 47-373
Cow position: chr21:23672347-23672663 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 80, 44

Conread position: 48-209
Cow position: chr21:18044183-18044023 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 48-274
Cow position: chr21:16327346-16327141 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 48-324
Cow position: chr21:3635134-3634853 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 29, 15

Conread position: 48-370
Cow position: chr21:2938625-2938947 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 88

Conread position: 49-255
Cow position: chr21:8451442-8451647 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 160
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 198, 0

Conread position: 49-278
Cow position: chr21:16278308-16278537 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 28

Conread position: 49-288
Cow position: chr21:19698962-19698731 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 62

Conread position: 49-341
Cow position: chr21:29908156-29907861 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 195
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 82, 126

Conread position: 49-348
Cow position: chr21:5455393-5455091 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 245

Conread position: 49-378
Cow position: chr21:4428276-4428614 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 233
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 108, 18

Conread position: 49-395
Cow position: chr21:25158491-25158833 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 9

Conread position: 51-266
Cow position: chr21:37719941-37719713 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 75, 0

Conread position: 51-345
Cow position: chr21:42681375-42681072 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 8

Conread position: 52-255
Cow position: chr21:39069792-39069590 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 88, 15

Conread position: 52-288
Cow position: chr21:16695971-16696206 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 52-290
Cow position: chr21:32190774-32191008 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 228, 25

Conread position: 52-346
Cow position: chr21:21170345-21170048 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 77

Conread position: 52-349
Cow position: chr21:13040915-13040630 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 193
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 114, 60

Conread position: 52-349
Cow position: chr21:44514867-44515171 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 196, 27

Conread position: 52-500
Cow position: chr21:24796437-24795988 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 176

Conread position: 53-288
Cow position: chr21:26974-27215 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 0

Conread position: 53-348
Cow position: chr21:6863072-6862783 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 93, 83

Conread position: 53-370
Cow position: chr21:2709959-2709642 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 83

Conread position: 53-467
Cow position: chr21:23900205-23899787 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 14

Conread position: 54-322
Cow position: chr21:12338768-12339039 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 81, 162

Conread position: 55-254
Cow position: chr21:4541270-4541067 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 160
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 67, 72

Conread position: 55-388
Cow position: chr21:17219016-17218683 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 234
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 69, 152

Conread position: 56-288
Cow position: chr21:10071325-10071093 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 56-291
Cow position: chr21:28914758-28914524 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 58-200
Cow position: chr21:10664046-10664188 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 88, 78

Conread position: 58-251
Cow position: chr21:459045-459244 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 71, 19

Conread position: 58-256
Cow position: chr21:46860761-46860562 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 166, 88

Conread position: 58-267
Cow position: chr21:21076734-21076942 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 152, 0

Conread position: 58-346
Cow position: chr21:49423636-49423925 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 194
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 85, 97

Conread position: 58-348
Cow position: chr21:443638-443926 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 26

Conread position: 59-299
Cow position: chr21:21078463-21078708 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 67, 146

Conread position: 59-346
Cow position: chr21:23971229-23970941 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 66, 79

Conread position: 59-348
Cow position: chr21:5153224-5153513 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 240

Conread position: 59-492
Cow position: chr21:40244041-40244480 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 251

Conread position: 60-192
Cow position: chr21:10118116-10118248 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 61-289
Cow position: chr21:45275223-45275453 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 29

Conread position: 63-459
Cow position: chr21:7582292-7581902 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 15

Conread position: 64-288
Cow position: chr21:30904989-30904769 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 64-290
Cow position: chr21:15976254-15976480 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 193, 13

Conread position: 64-321
Cow position: chr21:28908218-28907969 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 184, 63

Conread position: 64-348
Cow position: chr21:33263463-33263745 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 217, 184

Conread position: 64-369
Cow position: chr21:12616755-12617056 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 246, 42

Conread position: 67-251
Cow position: chr21:46830531-46830343 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 61, 12

Conread position: 67-283
Cow position: chr21:34337296-34337510 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 58, 70

Conread position: 67-284
Cow position: chr21:21961149-21961363 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 154, 32

Conread position: 67-285
Cow position: chr21:937667-937882 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 0

Conread position: 67-285
Cow position: chr21:39672289-39672507 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 69

Conread position: 67-288
Cow position: chr21:46462806-46463025 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 67-289
Cow position: chr21:38867951-38867735 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 130, 39

Conread position: 67-291
Cow position: chr21:39674954-39675179 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 69

Conread position: 67-330
Cow position: chr21:32191795-32192048 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 195
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 54, 0

Conread position: 67-347
Cow position: chr21:44566083-44565807 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 61

Conread position: 67-356
Cow position: chr21:35898006-35897722 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 164, 171

Conread position: 67-372
Cow position: chr21:25042104-25042409 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 69

Conread position: 67-484
Cow position: chr21:18494595-18495001 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 69

Conread position: 67-496
Cow position: chr21:28881764-28882179 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 290
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 243, 179

Conread position: 67-518
Cow position: chr21:42500651-42501104 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 108

Conread position: 68-231
Cow position: chr21:15275664-15275834 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 74

Conread position: 68-279
Cow position: chr21:3467886-3468101 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 114, 15

Conread position: 68-356
Cow position: chr21:29500523-29500810 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 13

Conread position: 69-356
Cow position: chr21:44108638-44108911 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 220, 83

Conread position: 69-391
Cow position: chr21:8290026-8289702 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 221
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 65, 48

Conread position: 70-346
Cow position: chr21:220578-220860 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 185
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 50

Conread position: 71-233
Cow position: chr21:28910083-28909922 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 76, 0

Conread position: 71-271
Cow position: chr21:37297694-37297499 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 13, 28

Conread position: 72-346
Cow position: chr21:21225940-21226213 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 187
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 51

Conread position: 72-349
Cow position: chr21:22345408-22345687 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 108, 17

Conread position: 73-357
Cow position: chr21:45971530-45971253 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 237, 6

Conread position: 73-500
Cow position: chr21:16612250-16612672 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 277

Conread position: 76-324
Cow position: chr21:15530976-15531235 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 188

Conread position: 76-370
Cow position: chr21:27500419-27500713 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 60

Conread position: 77-288
Cow position: chr21:16789346-16789557 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 77-496
Cow position: chr21:30232074-30231652 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 60

Conread position: 78-459
Cow position: chr21:17475445-17475825 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 230
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 14, 162

Conread position: 79-265
Cow position: chr21:33154951-33155137 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 79-287
Cow position: chr21:45916077-45915869 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 79-288
Cow position: chr21:17262485-17262280 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 79-346
Cow position: chr21:4794848-4795119 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 62

Conread position: 79-348
Cow position: chr21:24864776-24865052 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 46, 213

Conread position: 79-370
Cow position: chr21:9743952-9743661 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 57

Conread position: 80-347
Cow position: chr21:30688561-30688294 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 56

Conread position: 80-348
Cow position: chr21:21964659-21964919 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 78, 0

Conread position: 81-215
Cow position: chr21:13315879-13316012 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 81-348
Cow position: chr21:24136547-24136813 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 0

Conread position: 81-453
Cow position: chr21:10151437-10151793 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 246
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 113, 0

Conread position: 82-288
Cow position: chr21:23984653-23984448 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 83-288
Cow position: chr21:19668758-19668557 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 162
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 48, 0

Conread position: 83-388
Cow position: chr21:30626551-30626250 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 188, 19

Conread position: 83-388
Cow position: chr21:31158886-31159192 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 126

Conread position: 84-348
Cow position: chr21:45474123-45473861 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 179
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 137, 147

Conread position: 85-215
Cow position: chr21:18791105-18790970 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 85-279
Cow position: chr21:14125695-14125890 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 75, 0

Conread position: 85-346
Cow position: chr21:6956537-6956277 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 116

Conread position: 85-346
Cow position: chr21:17370250-17369989 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 226, 217

Conread position: 85-348
Cow position: chr21:40267195-40266932 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 85-391
Cow position: chr21:10960190-10959878 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 196
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 44, 223

Conread position: 85-459
Cow position: chr21:45151998-45151615 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 258
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 163, 295

Conread position: 86-255
Cow position: chr21:19363816-19363647 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 86-325
Cow position: chr21:32574358-32574606 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 56, 221

Conread position: 86-373
Cow position: chr21:4569864-4569575 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 179, 210

Conread position: 87-208
Cow position: chr21:49702619-49702498 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 87-349
Cow position: chr21:38651286-38651025 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 233, 0

Conread position: 87-356
Cow position: chr21:46777338-46777071 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 215

Conread position: 87-370
Cow position: chr21:21963113-21963396 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 49

Conread position: 92-219
Cow position: chr21:47168312-47168185 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 44

Conread position: 92-269
Cow position: chr21:42136204-42136034 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 92-276
Cow position: chr21:14238194-14238378 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 92-286
Cow position: chr21:10642241-10642431 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 156
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 109, 0

Conread position: 92-288
Cow position: chr21:16909695-16909895 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 157, 0

Conread position: 92-290
Cow position: chr21:38944019-38943821 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 36, 148

Conread position: 92-291
Cow position: chr21:11024350-11024151 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 92-356
Cow position: chr21:4399440-4399703 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 155, 0

Conread position: 92-370
Cow position: chr21:5790865-5791143 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 92-370
Cow position: chr21:24236753-24237030 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 44

Conread position: 92-370
Cow position: chr21:33235438-33235716 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 92-370
Cow position: chr21:36973174-36972896 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 92-394
Cow position: chr21:21975015-21975320 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 206
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 33

Conread position: 92-496
Cow position: chr21:9415883-9416292 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 108

Conread position: 92-496
Cow position: chr21:23586503-23586924 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 109

Conread position: 92-500
Cow position: chr21:30990626-30990231 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 274
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 218, 30

Conread position: 93-345
Cow position: chr21:42190517-42190276 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 196
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 163, 101

Conread position: 93-346
Cow position: chr21:26865083-26865336 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 134

Conread position: 93-391
Cow position: chr21:35899446-35899745 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 107

Conread position: 95-294
Cow position: chr21:2984148-2983947 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 160
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 182, 0

Conread position: 95-381
Cow position: chr21:25193438-25193723 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 0

Conread position: 95-450
Cow position: chr21:37479602-37479954 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 239
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 317, 140

Conread position: 95-490
Cow position: chr21:23821813-23822206 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 263
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 317, 11

Conread position: 96-283
Cow position: chr21:41032925-41033115 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 151
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 110, 0

Conread position: 97-348
Cow position: chr21:26071507-26071256 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 39

Conread position: 97-370
Cow position: chr21:4665839-4665568 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 39

Conread position: 97-391
Cow position: chr21:20162180-20162473 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 0

Conread position: 99-283
Cow position: chr21:17707076-17707258 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 126
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 99-284
Cow position: chr21:17439231-17439051 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 100-387
Cow position: chr21:28029046-28029332 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 181, 28

Conread position: 101-349
Cow position: chr21:11759806-11759567 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 192
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 189, 21

Conread position: 101-394
Cow position: chr21:22349792-22350088 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 186, 106

Conread position: 102-252
Cow position: chr21:7067672-7067822 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 21, 92

Conread position: 103-349
Cow position: chr21:22310544-22310794 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 167
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 174, 98

Conread position: 104-247
Cow position: chr21:5137855-5137711 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 131, 0

Conread position: 106-370
Cow position: chr21:34955854-34956113 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 30, 0

Conread position: 107-269
Cow position: chr21:9011235-9011080 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 108-255
Cow position: chr21:21143491-21143640 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 54, 135

Conread position: 108-346
Cow position: chr21:23449232-23449468 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 82

Conread position: 108-474
Cow position: chr21:641243-641608 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 249
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 202, 62

Conread position: 110-275
Cow position: chr21:41281246-41281080 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 110-288
Cow position: chr21:17616658-17616489 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 125, 0

Conread position: 110-370
Cow position: chr21:3364447-3364707 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 26

Conread position: 110-370
Cow position: chr21:13930795-13931055 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 111-254
Cow position: chr21:28955142-28955280 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 113-288
Cow position: chr21:27065467-27065297 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 143, 0

Conread position: 113-374
Cow position: chr21:43402329-43402072 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 177, 108

Conread position: 115-324
Cow position: chr21:13048533-13048325 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 111, 117

Conread position: 116-288
Cow position: chr21:39061512-39061685 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 142
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 71, 0

Conread position: 116-288
Cow position: chr21:45250615-45250441 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 119, 167

Conread position: 116-324
Cow position: chr21:42905706-42905506 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 22

Conread position: 119-459
Cow position: chr21:19196501-19196158 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 235
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 34, 17

Conread position: 119-492
Cow position: chr21:42384173-42384550 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 244
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 18, 117

Conread position: 120-460
Cow position: chr21:5392870-5392535 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 227
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 46, 34

Conread position: 120-501
Cow position: chr21:8985217-8985596 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 261
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 190, 179

Conread position: 121-290
Cow position: chr21:35823220-35823050 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 143
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 140, 37

Conread position: 122-357
Cow position: chr21:20045098-20044869 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 25, 114

Conread position: 122-388
Cow position: chr21:24857981-24858247 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 123-480
Cow position: chr21:20160355-20160706 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 239
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 167, 157

Conread position: 124-356
Cow position: chr21:38120775-38121011 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 134, 179

Conread position: 124-459
Cow position: chr21:13954184-13954522 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 129, 15

Conread position: 125-256
Cow position: chr21:8910366-8910235 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 11

Conread position: 125-288
Cow position: chr21:42487209-42487372 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 125-290
Cow position: chr21:703494-703328 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 125-343
Cow position: chr21:395551-395766 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 133, 0

Conread position: 125-346
Cow position: chr21:876094-876313 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 157, 22

Conread position: 125-370
Cow position: chr21:7132788-7132545 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 190, 50

Conread position: 125-370
Cow position: chr21:15905495-15905738 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 21, 11

Conread position: 125-370
Cow position: chr21:45372028-45372273 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 21, 11

Conread position: 125-388
Cow position: chr21:426467-426725 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 11, 0

Conread position: 126-259
Cow position: chr21:39664697-39664567 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 126-288
Cow position: chr21:18155687-18155849 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 126-324
Cow position: chr21:1815286-1815089 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 189, 50

Conread position: 126-370
Cow position: chr21:32396007-32395764 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 10

Conread position: 127-248
Cow position: chr21:35061742-35061864 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 127-324
Cow position: chr21:29225384-29225190 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 172, 108

Conread position: 127-459
Cow position: chr21:41974702-41974371 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 219
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 186, 11

Conread position: 128-253
Cow position: chr21:11645309-11645184 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 128-290
Cow position: chr21:42170306-42170468 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 133
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 73

Conread position: 128-348
Cow position: chr21:47760453-47760671 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 182, 164

Conread position: 128-388
Cow position: chr21:17282379-17282635 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 230, 0

Conread position: 129-328
Cow position: chr21:43046633-43046437 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 132-255
Cow position: chr21:27521713-27521590 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 132-288
Cow position: chr21:10032037-10032193 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 133-496
Cow position: chr21:46263858-46264214 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 241
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 325, 101

Conread position: 137-269
Cow position: chr21:34586729-34586596 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 137-346
Cow position: chr21:43320558-43320767 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 144
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 140, 167

Conread position: 137-366
Cow position: chr21:42414414-42414189 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 173, 98

Conread position: 138-356
Cow position: chr21:46849433-46849219 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 139-346
Cow position: chr21:17839716-17839921 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 172

Conread position: 141-479
Cow position: chr21:18718358-18718700 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 94

Conread position: 142-322
Cow position: chr21:18712976-18713153 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 168, 115

Conread position: 142-349
Cow position: chr21:5459705-5459499 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 143-251
Cow position: chr21:8617928-8618036 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 143-269
Cow position: chr21:14742941-14743067 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 143-269
Cow position: chr21:17196817-17196692 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 104, 0

Conread position: 143-275
Cow position: chr21:13763316-13763448 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 143-275
Cow position: chr21:39019950-39020083 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 124, 0

Conread position: 143-277
Cow position: chr21:45373798-45373932 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 143-278
Cow position: chr21:2663512-2663380 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 143-288
Cow position: chr21:31702265-31702120 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 124
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 143-322
Cow position: chr21:6833743-6833922 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 147, 152

Conread position: 143-324
Cow position: chr21:34010696-34010519 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 167, 73

Conread position: 143-324
Cow position: chr21:40786362-40786542 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 167, 61

Conread position: 143-325
Cow position: chr21:12331452-12331633 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 147, 99

Conread position: 143-345
Cow position: chr21:34511551-34511348 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 143-348
Cow position: chr21:11740439-11740235 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 140, 15

Conread position: 143-348
Cow position: chr21:19614868-19615065 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 143-348
Cow position: chr21:31278473-31278675 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 167, 92

Conread position: 143-348
Cow position: chr21:36642598-36642803 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 143-388
Cow position: chr21:28993935-28993690 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 171, 159

Conread position: 144-283
Cow position: chr21:32894478-32894341 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 144-285
Cow position: chr21:40265525-40265666 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 119
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 145-346
Cow position: chr21:8219545-8219749 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 38

Conread position: 145-346
Cow position: chr21:29634287-29634490 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 113, 164

Conread position: 145-370
Cow position: chr21:661914-661689 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 145-370
Cow position: chr21:35068055-35068280 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 146-288
Cow position: chr21:11228260-11228118 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 146-348
Cow position: chr21:3987792-3987590 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 146-348
Cow position: chr21:17205021-17204819 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 12

Conread position: 147-269
Cow position: chr21:14452521-14452643 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 147-348
Cow position: chr21:39561292-39561493 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 148-348
Cow position: chr21:25076692-25076492 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 148-370
Cow position: chr21:47745976-47745757 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 138, 12

Conread position: 149-335
Cow position: chr21:36762746-36762936 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 29, 157

Conread position: 149-370
Cow position: chr21:13168847-13169068 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 150-288
Cow position: chr21:5009479-5009341 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 150-288
Cow position: chr21:40530604-40530471 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 150-348
Cow position: chr21:19439162-19439359 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 159, 20

Conread position: 151-340
Cow position: chr21:26097711-26097523 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 159, 141

Conread position: 151-370
Cow position: chr21:19501724-19501943 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 151-374
Cow position: chr21:7452425-7452206 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 166, 7

Conread position: 152-288
Cow position: chr21:43317582-43317441 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 102, 44

Conread position: 152-480
Cow position: chr21:11707050-11706717 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 229
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 158, 83

Conread position: 153-459
Cow position: chr21:19170209-19169902 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 205
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 175, 82

Conread position: 154-346
Cow position: chr21:27406502-27406317 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 132, 90

Conread position: 154-370
Cow position: chr21:4092686-4092900 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 83, 0

Conread position: 155-348
Cow position: chr21:46037527-46037340 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 132
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 155-352
Cow position: chr21:16093425-16093621 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 155-496
Cow position: chr21:47802559-47802217 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 238
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 93, 146

Conread position: 156-497
Cow position: chr21:28734209-28733869 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 235
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 7, 203

Conread position: 156-497
Cow position: chr21:40058509-40058850 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 229
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 44, 135

Conread position: 157-346
Cow position: chr21:23479011-23478825 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 23

Conread position: 158-346
Cow position: chr21:44755071-44754883 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 143, 86

Conread position: 158-370
Cow position: chr21:2491084-2490872 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 158-501
Cow position: chr21:13489349-13489694 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 231
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 152, 107

Conread position: 159-288
Cow position: chr21:11639728-11639856 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 159-370
Cow position: chr21:25173576-25173788 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 12, 0

Conread position: 159-473
Cow position: chr21:32237007-32237316 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 151, 76

Conread position: 159-476
Cow position: chr21:10726988-10727301 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 213
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 215, 129

Conread position: 160-284
Cow position: chr21:3614069-3614191 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 160-369
Cow position: chr21:2359600-2359809 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 160-456
Cow position: chr21:2679267-2679557 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 141, 74

Conread position: 160-473
Cow position: chr21:36795308-36795621 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 209
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 91, 142

Conread position: 160-480
Cow position: chr21:25127318-25127630 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 225
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 130, 75

Conread position: 161-289
Cow position: chr21:19800015-19800142 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 161-290
Cow position: chr21:31997432-31997560 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 118, 0

Conread position: 161-348
Cow position: chr21:5808712-5808525 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 162-287
Cow position: chr21:37662216-37662087 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 162-373
Cow position: chr21:697275-697068 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 131, 73

Conread position: 163-291
Cow position: chr21:41039929-41040057 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 164-389
Cow position: chr21:28998195-28997969 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 165-501
Cow position: chr21:43357548-43357210 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 233
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 83, 119

Conread position: 166-348
Cow position: chr21:20377648-20377470 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 166-370
Cow position: chr21:8888580-8888784 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 166-373
Cow position: chr21:18568935-18568729 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 141
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 41, 70

Conread position: 167-348
Cow position: chr21:1457906-1457725 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 168-269
Cow position: chr21:11705312-11705413 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 168-347
Cow position: chr21:21600944-21600765 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 170-324
Cow position: chr21:29954709-29954556 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 140, 122

Conread position: 170-324
Cow position: chr21:39889026-39888872 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 111, 124

Conread position: 170-370
Cow position: chr21:4957472-4957272 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 171-348
Cow position: chr21:1529509-1529332 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 119, 80

Conread position: 171-370
Cow position: chr21:33632730-33632531 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 171-497
Cow position: chr21:10882145-10882485 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 222
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 241

Conread position: 172-497
Cow position: chr21:36793602-36793937 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 223
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 127, 196

Conread position: 173-370
Cow position: chr21:39822089-39821892 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 174-291
Cow position: chr21:39313447-39313330 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 174-374
Cow position: chr21:17511501-17511696 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 116, 45

Conread position: 176-370
Cow position: chr21:35919312-35919506 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 177-489
Cow position: chr21:41155587-41155899 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 199
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 133, 95

Conread position: 178-288
Cow position: chr21:10966959-10967069 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 179-288
Cow position: chr21:5482478-5482587 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 179-348
Cow position: chr21:43251850-43251681 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 179-370
Cow position: chr21:27336549-27336740 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 120

Conread position: 179-370
Cow position: chr21:32356627-32356437 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 182, 0

Conread position: 182-480
Cow position: chr21:36857359-36857652 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 200
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 77

Conread position: 188-347
Cow position: chr21:33350481-33350637 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 122, 48

Conread position: 194-370
Cow position: chr21:30650785-30650609 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 197-370
Cow position: chr21:34877532-34877360 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 200-369
Cow position: chr21:25184041-25183872 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 203-348
Cow position: chr21:17049343-17049489 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 47, 79

Conread position: 203-467
Cow position: chr21:4267599-4267330 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 174
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 97, 89

Conread position: 205-370
Cow position: chr21:24348417-24348582 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 211-370
Cow position: chr21:41235952-41235793 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 221-456
Cow position: chr21:42348909-42348673 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 92, 81

Show alignments to all cow chromosomes.