Cow genome map

Conread name: Ss1.1-MPL-MPL384_8_I21.5

Conread position: 1-256
Cow position: chr27:23658261-23658517 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 67, 177

Conread position: 1-346
Cow position: chr27:4664948-4664596 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 240
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 79, 296

Conread position: 1-346
Cow position: chr27:15632871-15632526 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 11, 33

Conread position: 1-348
Cow position: chr27:17763890-17763546 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 46

Conread position: 1-372
Cow position: chr27:8429950-8430340 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 266
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 130, 314

Conread position: 1-391
Cow position: chr27:27737458-27737840 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 19

Conread position: 2-131
Cow position: chr27:30677390-30677260 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 2-182
Cow position: chr27:14910296-14910482 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 58

Conread position: 2-224
Cow position: chr27:16117463-16117236 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 121, 28

Conread position: 2-225
Cow position: chr27:15363972-15364195 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 43, 82

Conread position: 2-228
Cow position: chr27:25676737-25676510 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 131, 158

Conread position: 2-231
Cow position: chr27:16407979-16408203 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 153
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 2-243
Cow position: chr27:25885499-25885736 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 117, 81

Conread position: 2-246
Cow position: chr27:15418933-15418687 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 84, 46

Conread position: 2-251
Cow position: chr27:12282379-12282632 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 132, 27

Conread position: 2-255
Cow position: chr27:17923609-17923867 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 128, 251

Conread position: 2-259
Cow position: chr27:21578097-21578359 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 193
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 128, 20

Conread position: 2-264
Cow position: chr27:16428354-16428625 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 18, 0

Conread position: 2-266
Cow position: chr27:9066130-9065868 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 58

Conread position: 2-284
Cow position: chr27:27460121-27460411 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 212, 65

Conread position: 2-289
Cow position: chr27:21986355-21986083 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 2-291
Cow position: chr27:8201637-8201922 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 0

Conread position: 2-294
Cow position: chr27:11403378-11403085 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 0

Conread position: 2-320
Cow position: chr27:26994351-26994675 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 212
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 13, 137

Conread position: 2-322
Cow position: chr27:16110814-16111134 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 55, 40

Conread position: 2-324
Cow position: chr27:9262578-9262255 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 75

Conread position: 2-324
Cow position: chr27:18943595-18943927 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 229
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 130, 39

Conread position: 2-335
Cow position: chr27:19962950-19962611 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 234
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 143, 66

Conread position: 2-342
Cow position: chr27:9254444-9254103 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 231
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 137, 20

Conread position: 2-346
Cow position: chr27:3729838-3730186 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 239
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 77, 239

Conread position: 2-346
Cow position: chr27:6292857-6292497 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 273

Conread position: 2-346
Cow position: chr27:7418402-7418757 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 2-346
Cow position: chr27:7818768-7818405 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 244
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 127, 28

Conread position: 2-346
Cow position: chr27:9371975-9371626 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 303

Conread position: 2-346
Cow position: chr27:19014715-19015065 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 237
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 74, 48

Conread position: 2-346
Cow position: chr27:23583558-23583242 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 231
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 2-346
Cow position: chr27:24009461-24009808 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 134, 10

Conread position: 2-346
Cow position: chr27:25292637-25292274 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 244
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 114, 65

Conread position: 2-346
Cow position: chr27:27867209-27867566 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 250
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 122, 291

Conread position: 2-346
Cow position: chr27:30583214-30582864 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 262

Conread position: 2-370
Cow position: chr27:1088707-1088349 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 238
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 96

Conread position: 2-370
Cow position: chr27:18954736-18955094 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 255
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 134, 65

Conread position: 2-381
Cow position: chr27:4294937-4295335 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 265
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 132, 0

Conread position: 2-386
Cow position: chr27:13976924-13977306 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 75

Conread position: 2-391
Cow position: chr27:8727291-8727686 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 260
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 25, 64

Conread position: 2-459
Cow position: chr27:18446123-18446571 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 45

Conread position: 3-112
Cow position: chr27:26379799-26379691 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 3-117
Cow position: chr27:11651798-11651912 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-117
Cow position: chr27:26644552-26644438 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-129
Cow position: chr27:22013928-22014053 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 3-134
Cow position: chr27:16794602-16794733 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-134
Cow position: chr27:27683563-27683693 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 64, 0

Conread position: 3-147
Cow position: chr27:4819100-4819242 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 3-162
Cow position: chr27:13354007-13354167 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 3-168
Cow position: chr27:5464328-5464163 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 143, 133

Conread position: 3-174
Cow position: chr27:8202299-8202129 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 90, 0

Conread position: 3-186
Cow position: chr27:27809757-27809574 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 143, 133

Conread position: 3-191
Cow position: chr27:8569260-8569456 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 135, 178

Conread position: 3-195
Cow position: chr27:16263784-16263592 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 3-198
Cow position: chr27:17332114-17331920 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 158, 119

Conread position: 3-201
Cow position: chr27:19607179-19607377 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 143, 133

Conread position: 3-206
Cow position: chr27:27192461-27192251 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 121, 0

Conread position: 3-213
Cow position: chr27:11095107-11094897 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 3-223
Cow position: chr27:18741080-18741310 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 57, 0

Conread position: 3-226
Cow position: chr27:1502195-1502416 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 3-228
Cow position: chr27:27742910-27743145 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 113, 0

Conread position: 3-233
Cow position: chr27:11470232-11470462 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-248
Cow position: chr27:4389741-4389986 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 120

Conread position: 3-248
Cow position: chr27:10274990-10275238 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 3-248
Cow position: chr27:13317496-13317741 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-248
Cow position: chr27:27728792-27728547 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 126, 225

Conread position: 3-253
Cow position: chr27:6620663-6620417 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 29, 0

Conread position: 3-254
Cow position: chr27:16494188-16493933 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 52, 204

Conread position: 3-255
Cow position: chr27:10321760-10322017 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 142

Conread position: 3-255
Cow position: chr27:15668002-15668257 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 166

Conread position: 3-255
Cow position: chr27:16337505-16337255 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 181
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 80, 0

Conread position: 3-255
Cow position: chr27:28036457-28036696 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 43, 0

Conread position: 3-256
Cow position: chr27:3554832-3554581 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 11

Conread position: 3-259
Cow position: chr27:20001114-20000858 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-259
Cow position: chr27:26631429-26631181 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 3-264
Cow position: chr27:31250379-31250637 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 127, 204

Conread position: 3-268
Cow position: chr27:3652998-3652734 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 0

Conread position: 3-269
Cow position: chr27:5967520-5967264 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 238, 73

Conread position: 3-274
Cow position: chr27:15867855-15867585 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-279
Cow position: chr27:5423913-5424193 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 27

Conread position: 3-283
Cow position: chr27:29234874-29234592 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-284
Cow position: chr27:21408082-21408364 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 23

Conread position: 3-285
Cow position: chr27:29309487-29309213 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 195
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 119, 9

Conread position: 3-285
Cow position: chr27:31230625-31230907 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 233

Conread position: 3-288
Cow position: chr27:1636482-1636761 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 142, 64

Conread position: 3-288
Cow position: chr27:7958367-7958651 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 3-288
Cow position: chr27:10085397-10085676 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 65

Conread position: 3-288
Cow position: chr27:11413198-11412900 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 208
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 75, 206

Conread position: 3-288
Cow position: chr27:12190975-12191265 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 9

Conread position: 3-288
Cow position: chr27:13409698-13409984 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 64

Conread position: 3-288
Cow position: chr27:13442369-13442657 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 0

Conread position: 3-288
Cow position: chr27:14381138-14381422 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 3-288
Cow position: chr27:15349336-15349619 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 104

Conread position: 3-288
Cow position: chr27:16984264-16983971 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 3-288
Cow position: chr27:17476521-17476227 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 3-288
Cow position: chr27:17645726-17646014 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 62

Conread position: 3-288
Cow position: chr27:18062662-18062369 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 190
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 206

Conread position: 3-288
Cow position: chr27:18621269-18620984 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-288
Cow position: chr27:20549221-20549508 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 120

Conread position: 3-288
Cow position: chr27:26856742-26857027 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-291
Cow position: chr27:15178682-15178394 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-294
Cow position: chr27:12239847-12240138 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-322
Cow position: chr27:1354066-1353735 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 291

Conread position: 3-323
Cow position: chr27:26785513-26785830 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 254

Conread position: 3-324
Cow position: chr27:2900773-2901093 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 64

Conread position: 3-324
Cow position: chr27:11606184-11605862 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-324
Cow position: chr27:26959142-26959472 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 232
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 78, 208

Conread position: 3-324
Cow position: chr27:26998946-26999276 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 119, 231

Conread position: 3-324
Cow position: chr27:30921620-30921303 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 136

Conread position: 3-342
Cow position: chr27:25809054-25809392 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 289

Conread position: 3-344
Cow position: chr27:22107787-22108131 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 34

Conread position: 3-346
Cow position: chr27:14869972-14870320 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 230
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 69, 218

Conread position: 3-346
Cow position: chr27:22796957-22796614 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-346
Cow position: chr27:30561396-30561039 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 246
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 123, 308

Conread position: 3-348
Cow position: chr27:536926-536582 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 107

Conread position: 3-348
Cow position: chr27:10590206-10590551 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr27:12006850-12007195 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr27:15100341-15100686 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr27:21393041-21393380 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 9

Conread position: 3-348
Cow position: chr27:23452939-23452604 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 129, 51

Conread position: 3-348
Cow position: chr27:23502931-23502588 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 97

Conread position: 3-348
Cow position: chr27:23894036-23894381 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr27:30271620-30271275 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr27:30684377-30684032 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-349
Cow position: chr27:15312667-15312325 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-349
Cow position: chr27:15315957-15315617 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 64

Conread position: 3-349
Cow position: chr27:16030696-16030350 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-349
Cow position: chr27:20858820-20859163 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-356
Cow position: chr27:15927243-15926888 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 122

Conread position: 3-366
Cow position: chr27:28106663-28107026 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 74

Conread position: 3-368
Cow position: chr27:523723-524088 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-369
Cow position: chr27:834075-834441 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:526611-526978 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr27:724246-724613 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:1030852-1030488 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:1481595-1481962 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:1521381-1521748 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:1654801-1655168 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:1675855-1675473 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 315

Conread position: 3-370
Cow position: chr27:2001546-2001913 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:3650183-3650551 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 131

Conread position: 3-370
Cow position: chr27:4769022-4769384 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 88

Conread position: 3-370
Cow position: chr27:5861674-5861306 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 133

Conread position: 3-370
Cow position: chr27:5881230-5881596 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:8187520-8187891 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:8959315-8958948 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:9046130-9045762 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:10579645-10580007 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:12005979-12005612 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:12016809-12016444 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:12098061-12097697 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 64

Conread position: 3-370
Cow position: chr27:12147594-12147961 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:13422462-13422095 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:16045432-16045799 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr27:17403365-17402998 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:18812156-18811789 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:19299864-19299497 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:19325969-19325602 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:19487282-19486915 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:26598344-26597978 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 0

Conread position: 3-370
Cow position: chr27:27630272-27630639 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:29035680-29035313 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:29374204-29373837 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:29446403-29446038 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:29796938-29797305 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:30306575-30306208 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr27:31566115-31566482 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-374
Cow position: chr27:15643988-15644359 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 290

Conread position: 3-374
Cow position: chr27:23511588-23511220 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 65

Conread position: 3-384
Cow position: chr27:4719427-4719806 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 155

Conread position: 3-386
Cow position: chr27:32494-32877 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-386
Cow position: chr27:23079788-23080171 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-388
Cow position: chr27:1058209-1058595 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 263
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 49

Conread position: 3-448
Cow position: chr27:14669911-14670357 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 279

Conread position: 3-456
Cow position: chr27:1123485-1123050 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 33

Conread position: 3-459
Cow position: chr27:815834-815382 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 414, 343

Conread position: 3-459
Cow position: chr27:13876194-13875747 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 390, 64

Conread position: 3-459
Cow position: chr27:24558982-24559429 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 294
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 160, 62

Conread position: 3-459
Cow position: chr27:28018804-28018349 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 113

Conread position: 3-480
Cow position: chr27:8942222-8942691 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 215

Conread position: 3-483
Cow position: chr27:17473290-17472798 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 102

Conread position: 3-483
Cow position: chr27:21350546-21351032 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 139

Conread position: 3-483
Cow position: chr27:24999268-24999751 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 64

Conread position: 3-491
Cow position: chr27:9090331-9090822 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 32

Conread position: 3-495
Cow position: chr27:13198373-13197898 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 98

Conread position: 3-496
Cow position: chr27:27019634-27020128 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 56

Conread position: 3-497
Cow position: chr27:23128921-23128431 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 380, 152

Conread position: 3-510
Cow position: chr27:4673484-4672984 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 230

Conread position: 3-518
Cow position: chr27:17396985-17397495 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 91

Conread position: 4-150
Cow position: chr27:3231837-3231691 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 4-191
Cow position: chr27:10980461-10980274 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 4-245
Cow position: chr27:24202856-24202614 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 129, 209

Conread position: 4-248
Cow position: chr27:28163913-28164150 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 85

Conread position: 4-252
Cow position: chr27:23917552-23917792 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 132, 0

Conread position: 4-254
Cow position: chr27:27527739-27527989 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-255
Cow position: chr27:13638499-13638745 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 4-270
Cow position: chr27:12173639-12173909 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 124, 73

Conread position: 4-297
Cow position: chr27:30418127-30417849 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 63, 0

Conread position: 4-345
Cow position: chr27:25970974-25970637 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 44

Conread position: 4-346
Cow position: chr27:11630208-11629874 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 228
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 121, 45

Conread position: 4-348
Cow position: chr27:6523528-6523170 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 243
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 123, 309

Conread position: 4-370
Cow position: chr27:3239543-3239910 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 96

Conread position: 4-370
Cow position: chr27:8743400-8743034 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 132

Conread position: 4-480
Cow position: chr27:24445688-24446163 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 73

Conread position: 5-138
Cow position: chr27:27292097-27292229 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 5-165
Cow position: chr27:22400245-22400087 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 5-202
Cow position: chr27:28008600-28008807 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 62, 21

Conread position: 5-202
Cow position: chr27:30877752-30877948 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 153, 0

Conread position: 5-205
Cow position: chr27:31268910-31269119 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 61, 73

Conread position: 5-228
Cow position: chr27:14881342-14881114 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 77, 108

Conread position: 5-233
Cow position: chr27:10306806-10307037 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 62

Conread position: 5-233
Cow position: chr27:25990456-25990682 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 187, 0

Conread position: 5-245
Cow position: chr27:28685633-28685389 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 129, 72

Conread position: 5-247
Cow position: chr27:15375678-15375917 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 62, 0

Conread position: 5-247
Cow position: chr27:30697254-30697498 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 125, 47

Conread position: 5-248
Cow position: chr27:24224124-24224361 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 87, 0

Conread position: 5-254
Cow position: chr27:795282-795030 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 119, 62

Conread position: 5-255
Cow position: chr27:344229-343979 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-255
Cow position: chr27:4869825-4869571 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 125, 98

Conread position: 5-255
Cow position: chr27:22559545-22559295 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 139

Conread position: 5-255
Cow position: chr27:25800507-25800257 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-266
Cow position: chr27:24055387-24055661 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 74, 144

Conread position: 5-268
Cow position: chr27:5830409-5830143 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 59

Conread position: 5-269
Cow position: chr27:5925980-5926247 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 67, 103

Conread position: 5-269
Cow position: chr27:19146386-19146652 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 86

Conread position: 5-269
Cow position: chr27:21452148-21452422 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 258

Conread position: 5-272
Cow position: chr27:30572760-30573031 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 131, 56

Conread position: 5-283
Cow position: chr27:26849000-26848729 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 5-288
Cow position: chr27:9989177-9988891 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 5-288
Cow position: chr27:11481634-11481914 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 0

Conread position: 5-288
Cow position: chr27:15871628-15871346 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 112

Conread position: 5-288
Cow position: chr27:17898163-17898448 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 190
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 117, 153

Conread position: 5-288
Cow position: chr27:26142261-26141978 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 134

Conread position: 5-288
Cow position: chr27:26436237-26436513 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 172

Conread position: 5-288
Cow position: chr27:27605885-27606160 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 121, 16

Conread position: 5-288
Cow position: chr27:27930967-27931238 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 192, 0

Conread position: 5-288
Cow position: chr27:28984470-28984757 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 5-288
Cow position: chr27:29812005-29812288 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 76

Conread position: 5-290
Cow position: chr27:30783619-30783909 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 118, 228

Conread position: 5-291
Cow position: chr27:20799115-20799401 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-325
Cow position: chr27:777182-776868 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 228
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 45

Conread position: 5-342
Cow position: chr27:17469416-17469753 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 229
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 127, 53

Conread position: 5-345
Cow position: chr27:11255984-11255640 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 5-346
Cow position: chr27:5853450-5853791 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 38

Conread position: 5-346
Cow position: chr27:7691062-7690723 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 220
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 36

Conread position: 5-346
Cow position: chr27:11090720-11091070 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 248
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 137, 44

Conread position: 5-346
Cow position: chr27:16241809-16241467 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 235
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 14, 75

Conread position: 5-346
Cow position: chr27:17423323-17423653 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 125, 179

Conread position: 5-346
Cow position: chr27:26945357-26945023 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 226
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 131, 207

Conread position: 5-346
Cow position: chr27:28293644-28293300 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 282

Conread position: 5-347
Cow position: chr27:1293951-1294294 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 0

Conread position: 5-347
Cow position: chr27:16823272-16822939 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-348
Cow position: chr27:2332204-2332543 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-348
Cow position: chr27:21349281-21349624 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 128

Conread position: 5-348
Cow position: chr27:26545458-26545799 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 5-348
Cow position: chr27:26934909-26935250 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 71

Conread position: 5-349
Cow position: chr27:6074381-6074040 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 5-356
Cow position: chr27:26033824-26033478 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 241
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 62

Conread position: 5-367
Cow position: chr27:3989076-3988715 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 211

Conread position: 5-369
Cow position: chr27:20811120-20811486 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 0

Conread position: 5-370
Cow position: chr27:2557290-2556913 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 5-370
Cow position: chr27:14297893-14298258 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 131

Conread position: 5-373
Cow position: chr27:8973149-8973514 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 244

Conread position: 5-381
Cow position: chr27:4983134-4983510 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-381
Cow position: chr27:5836525-5836908 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 45

Conread position: 5-381
Cow position: chr27:10384134-10384511 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 58

Conread position: 5-381
Cow position: chr27:13901827-13902203 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-381
Cow position: chr27:15033188-15032815 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 0

Conread position: 5-381
Cow position: chr27:19523006-19522629 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 5-386
Cow position: chr27:19423671-19423290 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-391
Cow position: chr27:26984804-26984424 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 123

Conread position: 5-435
Cow position: chr27:12751233-12751649 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 145

Conread position: 5-459
Cow position: chr27:28907532-28907079 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 153

Conread position: 5-468
Cow position: chr27:22179322-22179788 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 62

Conread position: 5-470
Cow position: chr27:4882075-4881605 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 294

Conread position: 5-477
Cow position: chr27:25380463-25379988 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 110

Conread position: 5-480
Cow position: chr27:27063978-27064447 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 118

Conread position: 5-483
Cow position: chr27:1189346-1189826 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 294

Conread position: 5-503
Cow position: chr27:12549576-12549073 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 134

Conread position: 5-510
Cow position: chr27:21668675-21669157 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 317
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 308, 21

Conread position: 6-189
Cow position: chr27:16581368-16581182 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 83

Conread position: 6-209
Cow position: chr27:20134988-20134786 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 148, 52

Conread position: 6-215
Cow position: chr27:4509048-4508831 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 122, 60

Conread position: 6-219
Cow position: chr27:12112244-12112463 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 120, 0

Conread position: 6-248
Cow position: chr27:27053793-27053545 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 88

Conread position: 6-251
Cow position: chr27:19578579-19578331 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 120, 162

Conread position: 6-259
Cow position: chr27:8048220-8048476 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 125, 42

Conread position: 6-266
Cow position: chr27:23946524-23946777 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 251, 106

Conread position: 6-279
Cow position: chr27:8262545-8262816 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 46

Conread position: 6-324
Cow position: chr27:15272372-15272054 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 296

Conread position: 6-324
Cow position: chr27:21246876-21246549 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 230
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 113, 61

Conread position: 6-346
Cow position: chr27:13696041-13696390 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 238
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 128, 174

Conread position: 6-347
Cow position: chr27:12277811-12278147 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 154

Conread position: 6-349
Cow position: chr27:20828237-20828583 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 323

Conread position: 6-373
Cow position: chr27:5990347-5989980 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 182

Conread position: 6-388
Cow position: chr27:7094891-7094500 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 260
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 117, 177

Conread position: 6-388
Cow position: chr27:24295555-24295177 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 38

Conread position: 6-477
Cow position: chr27:23454677-23455160 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 253

Conread position: 6-491
Cow position: chr27:8061899-8062371 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 317
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 142, 107

Conread position: 7-254
Cow position: chr27:263493-263740 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-284
Cow position: chr27:10992838-10992555 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 42, 206

Conread position: 7-284
Cow position: chr27:20065898-20066175 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 121

Conread position: 7-288
Cow position: chr27:9337978-9337702 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 0

Conread position: 7-288
Cow position: chr27:11434865-11435149 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 211

Conread position: 7-290
Cow position: chr27:26087687-26087410 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 238, 159

Conread position: 7-335
Cow position: chr27:30641106-30640787 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 223
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 131, 45

Conread position: 7-346
Cow position: chr27:25985267-25985607 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 232
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 119, 70

Conread position: 7-348
Cow position: chr27:21283546-21283202 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 232

Conread position: 7-356
Cow position: chr27:25784058-25783718 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 72, 207

Conread position: 8-191
Cow position: chr27:13843874-13843692 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 71, 0

Conread position: 8-246
Cow position: chr27:4835122-4835351 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 59, 0

Conread position: 8-248
Cow position: chr27:30365664-30365420 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 116, 164

Conread position: 8-269
Cow position: chr27:26239708-26239448 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 217

Conread position: 8-324
Cow position: chr27:20757598-20757906 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 141

Conread position: 8-346
Cow position: chr27:12650163-12650504 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 231
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 103, 234

Conread position: 8-346
Cow position: chr27:15465826-15465494 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 233
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 67, 22

Conread position: 8-347
Cow position: chr27:23516653-23516995 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 226
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 130, 39

Conread position: 8-348
Cow position: chr27:24115810-24116151 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 225
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 120, 39

Conread position: 8-357
Cow position: chr27:10283839-10284206 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 246
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 95, 22

Conread position: 8-374
Cow position: chr27:11422386-11422731 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 68

Conread position: 8-388
Cow position: chr27:23472717-23472340 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 193

Conread position: 8-391
Cow position: chr27:11693273-11693650 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 260
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 128, 194

Conread position: 9-131
Cow position: chr27:2936542-2936665 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 9-274
Cow position: chr27:26595900-26595626 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 140, 0

Conread position: 9-346
Cow position: chr27:864775-864419 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 238
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 119, 201

Conread position: 9-346
Cow position: chr27:19626823-19627156 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 232
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 102, 51

Conread position: 10-249
Cow position: chr27:10324226-10323987 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 51, 64

Conread position: 10-256
Cow position: chr27:30446688-30446438 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 120, 186

Conread position: 10-282
Cow position: chr27:15292602-15292319 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 78, 139

Conread position: 10-346
Cow position: chr27:12261836-12261509 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 237
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 11

Conread position: 10-348
Cow position: chr27:2627610-2627948 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 289

Conread position: 10-459
Cow position: chr27:16620448-16620004 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 119

Conread position: 10-460
Cow position: chr27:19388488-19388029 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 254

Conread position: 10-475
Cow position: chr27:22418305-22418769 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 241

Conread position: 10-492
Cow position: chr27:22330197-22330691 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 325
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 122, 38

Conread position: 11-256
Cow position: chr27:15201195-15200945 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 232

Conread position: 11-278
Cow position: chr27:27049457-27049718 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 97, 164

Conread position: 11-287
Cow position: chr27:13430582-13430299 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 10, 68

Conread position: 11-324
Cow position: chr27:1173083-1173395 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 56

Conread position: 11-346
Cow position: chr27:16260504-16260839 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 126

Conread position: 11-347
Cow position: chr27:8291553-8291886 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 60

Conread position: 11-372
Cow position: chr27:427575-427226 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 299, 116

Conread position: 12-196
Cow position: chr27:24342704-24342526 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 12-370
Cow position: chr27:26463426-26463784 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 124

Conread position: 13-153
Cow position: chr27:26796679-26796818 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 106, 0

Conread position: 13-210
Cow position: chr27:30447646-30447442 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 103, 0

Conread position: 13-291
Cow position: chr27:14125300-14125578 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 123

Conread position: 13-346
Cow position: chr27:17439078-17438729 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 231
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 112, 135

Conread position: 13-348
Cow position: chr27:20866064-20866401 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 242

Conread position: 13-348
Cow position: chr27:26223802-26224144 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 291

Conread position: 14-218
Cow position: chr27:25719230-25719436 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 162
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 56, 0

Conread position: 14-324
Cow position: chr27:26617808-26617510 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 62, 144

Conread position: 14-325
Cow position: chr27:29612485-29612167 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 212
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 114, 175

Conread position: 15-210
Cow position: chr27:465387-465183 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 58, 6

Conread position: 16-254
Cow position: chr27:21418539-21418778 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 142

Conread position: 16-346
Cow position: chr27:24937860-24938194 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 80

Conread position: 18-288
Cow position: chr27:16787287-16787011 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 19-367
Cow position: chr27:22034934-22035268 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 238
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 263, 57

Conread position: 20-192
Cow position: chr27:8296961-8296783 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 20-267
Cow position: chr27:20554404-20554155 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 214, 0

Conread position: 20-269
Cow position: chr27:29830034-29830289 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 150

Conread position: 20-270
Cow position: chr27:20629480-20629227 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 0

Conread position: 20-324
Cow position: chr27:28993718-28993411 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 206
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 69, 60

Conread position: 20-346
Cow position: chr27:28895436-28895751 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 218
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 133, 69

Conread position: 20-349
Cow position: chr27:1768182-1768510 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 163

Conread position: 20-373
Cow position: chr27:26653762-26653403 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 107, 211

Conread position: 21-288
Cow position: chr27:15319900-15319636 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 102, 0

Conread position: 21-345
Cow position: chr27:18205787-18205466 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 54, 124

Conread position: 21-349
Cow position: chr27:6909936-6909630 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 226
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 122

Conread position: 22-234
Cow position: chr27:5843260-5843467 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 144, 0

Conread position: 22-243
Cow position: chr27:30476521-30476289 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 22-284
Cow position: chr27:16292844-16292585 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 93

Conread position: 22-303
Cow position: chr27:1903807-1903540 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 190
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 268, 31

Conread position: 22-346
Cow position: chr27:16287748-16287437 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 215
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 120, 26

Conread position: 23-191
Cow position: chr27:20264044-20264216 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 23-248
Cow position: chr27:6019258-6019481 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 23-370
Cow position: chr27:26584753-26584406 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 113

Conread position: 25-211
Cow position: chr27:787936-788116 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 62, 38

Conread position: 25-218
Cow position: chr27:2639563-2639760 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 112, 52

Conread position: 25-388
Cow position: chr27:30177128-30177490 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 246
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 233, 88

Conread position: 27-374
Cow position: chr27:4331026-4330687 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 28-388
Cow position: chr27:22394627-22394256 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 259
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 107, 63

Conread position: 32-373
Cow position: chr27:2298853-2298511 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 266

Conread position: 32-388
Cow position: chr27:15866661-15866312 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 233

Conread position: 33-242
Cow position: chr27:26440275-26440489 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 94, 19

Conread position: 35-284
Cow position: chr27:2569824-2570073 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 35-288
Cow position: chr27:1768847-1769100 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 35-370
Cow position: chr27:165119-164783 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 144
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 8, 247

Conread position: 37-246
Cow position: chr27:2401840-2401622 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 85, 102

Conread position: 38-391
Cow position: chr27:11672456-11672096 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 214
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 93, 21

Conread position: 39-347
Cow position: chr27:14351016-14351321 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 207
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 37, 185

Conread position: 42-285
Cow position: chr27:26010212-26009975 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 42-347
Cow position: chr27:22440572-22440265 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 238

Conread position: 42-381
Cow position: chr27:13273581-13273915 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 29

Conread position: 42-387
Cow position: chr27:22549360-22549695 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 72

Conread position: 43-269
Cow position: chr27:30606667-30606450 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 43-321
Cow position: chr27:15925764-15925486 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 214

Conread position: 44-269
Cow position: chr27:16588249-16588470 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 103, 23

Conread position: 44-284
Cow position: chr27:7277667-7277904 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 13, 18

Conread position: 45-298
Cow position: chr27:13182557-13182309 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 125

Conread position: 46-287
Cow position: chr27:21977713-21977952 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 47-288
Cow position: chr27:16305355-16305596 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 48-191
Cow position: chr27:26952813-26952958 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 48-249
Cow position: chr27:9169248-9169455 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 94, 0

Conread position: 48-269
Cow position: chr27:27002460-27002682 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 25, 71

Conread position: 48-324
Cow position: chr27:28276689-28276422 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 19, 0

Conread position: 48-368
Cow position: chr27:20749626-20749937 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 35

Conread position: 48-381
Cow position: chr27:22654953-22655286 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 49-228
Cow position: chr27:4812427-4812605 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 125, 0

Conread position: 49-256
Cow position: chr27:26219358-26219149 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 202, 0

Conread position: 52-244
Cow position: chr27:26551505-26551317 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 147, 0

Conread position: 52-268
Cow position: chr27:25732715-25732500 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 105, 35

Conread position: 52-357
Cow position: chr27:23595690-23595388 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 178

Conread position: 53-259
Cow position: chr27:2848340-2848126 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 0

Conread position: 53-295
Cow position: chr27:30749144-30748891 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 53-370
Cow position: chr27:30361625-30361308 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 83

Conread position: 57-219
Cow position: chr27:11815225-11815387 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 89
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 59-322
Cow position: chr27:16474343-16474609 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 177
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 53

Conread position: 59-345
Cow position: chr27:24069136-24068839 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 192
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 153

Conread position: 59-391
Cow position: chr27:13257752-13258082 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 219
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 93, 79

Conread position: 60-325
Cow position: chr27:21103114-21103389 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 66, 138

Conread position: 60-391
Cow position: chr27:6454632-6454296 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 234
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 74, 111

Conread position: 61-348
Cow position: chr27:26313790-26314073 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 127

Conread position: 61-370
Cow position: chr27:24241359-24241050 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 75

Conread position: 61-478
Cow position: chr27:26807149-26807569 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 268
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 66, 179

Conread position: 62-263
Cow position: chr27:2682500-2682693 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 131

Conread position: 66-221
Cow position: chr27:29208317-29208167 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 67-233
Cow position: chr27:6641668-6641495 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 67-248
Cow position: chr27:30814865-30814678 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 16

Conread position: 67-252
Cow position: chr27:27558097-27558280 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 10

Conread position: 67-262
Cow position: chr27:732968-732776 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 156
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 168, 0

Conread position: 67-267
Cow position: chr27:26135663-26135467 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 153, 0

Conread position: 67-271
Cow position: chr27:11180569-11180777 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 64, 134

Conread position: 67-322
Cow position: chr27:27819731-27819474 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 173
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 184

Conread position: 67-346
Cow position: chr27:23793902-23793625 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 191
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 12

Conread position: 67-453
Cow position: chr27:14530439-14530827 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 341

Conread position: 67-467
Cow position: chr27:2390700-2390295 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 71

Conread position: 68-254
Cow position: chr27:25277576-25277384 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 64, 174

Conread position: 69-328
Cow position: chr27:27501928-27502197 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 178
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 8

Conread position: 69-348
Cow position: chr27:20137593-20137873 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 69-349
Cow position: chr27:16331729-16331463 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 13

Conread position: 72-346
Cow position: chr27:16785167-16784879 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 62, 131

Conread position: 72-348
Cow position: chr27:12501885-12502161 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 64

Conread position: 72-489
Cow position: chr27:18558766-18558342 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 268
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 114, 28

Conread position: 74-370
Cow position: chr27:28081920-28082220 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 212
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 192, 7

Conread position: 76-284
Cow position: chr27:13410964-13411170 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 9

Conread position: 77-266
Cow position: chr27:20636681-20636870 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 77-277
Cow position: chr27:27856737-27856536 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 95, 58

Conread position: 77-288
Cow position: chr27:21297296-21297084 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 77-288
Cow position: chr27:26015804-26015597 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 63, 0

Conread position: 77-335
Cow position: chr27:1906464-1906206 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 59

Conread position: 78-369
Cow position: chr27:20640950-20641240 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 172, 21

Conread position: 79-233
Cow position: chr27:22820304-22820150 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 67, 57

Conread position: 79-288
Cow position: chr27:25924177-25923969 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 24, 80

Conread position: 79-510
Cow position: chr27:30792546-30792977 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 279
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 146, 57

Conread position: 80-290
Cow position: chr27:6374910-6374706 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 81-288
Cow position: chr27:19931544-19931338 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 199, 0

Conread position: 81-374
Cow position: chr27:28146258-28146550 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 154

Conread position: 82-259
Cow position: chr27:7648142-7648321 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 40, 0

Conread position: 82-379
Cow position: chr27:22255277-22254980 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 202
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 84-255
Cow position: chr27:6058917-6058749 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 100

Conread position: 85-287
Cow position: chr27:27521618-27521819 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 85-288
Cow position: chr27:9060122-9059915 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 131, 0

Conread position: 85-391
Cow position: chr27:26300228-26299922 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 49, 173

Conread position: 86-283
Cow position: chr27:8353854-8353656 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 25, 93

Conread position: 86-496
Cow position: chr27:27040982-27040580 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 278
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 200, 57

Conread position: 91-357
Cow position: chr27:29515480-29515744 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 162, 202

Conread position: 92-286
Cow position: chr27:29799314-29799130 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 92-288
Cow position: chr27:27896867-27897063 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 92-328
Cow position: chr27:10582743-10582507 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 163

Conread position: 92-348
Cow position: chr27:9334981-9335234 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 92-348
Cow position: chr27:27141972-27141718 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 218, 188

Conread position: 92-348
Cow position: chr27:30388837-30389093 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 193, 66

Conread position: 92-373
Cow position: chr27:5915295-5915576 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 92-449
Cow position: chr27:22426449-22426806 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 233
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 110, 199

Conread position: 92-453
Cow position: chr27:29831320-29831668 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 237
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 218, 57

Conread position: 94-284
Cow position: chr27:23148147-23148337 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 21, 144

Conread position: 94-288
Cow position: chr27:7289730-7289925 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 94-370
Cow position: chr27:30014698-30014973 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 5

Conread position: 96-233
Cow position: chr27:27469353-27469490 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 96-349
Cow position: chr27:29341168-29341429 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 159, 0

Conread position: 97-252
Cow position: chr27:30374181-30374334 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 74, 0

Conread position: 99-272
Cow position: chr27:22771978-22772152 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 158, 77

Conread position: 99-387
Cow position: chr27:11723524-11723819 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 44, 12

Conread position: 99-500
Cow position: chr27:15454584-15454189 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 264
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 184, 37

Conread position: 101-217
Cow position: chr27:30765701-30765585 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 101-348
Cow position: chr27:11651450-11651203 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 35

Conread position: 102-364
Cow position: chr27:264616-264361 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 128, 0

Conread position: 103-450
Cow position: chr27:26433445-26433785 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 228
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 120, 133

Conread position: 104-246
Cow position: chr27:26644263-26644124 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 104-496
Cow position: chr27:27683747-27684143 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 264
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 152, 79

Conread position: 104-519
Cow position: chr27:22171666-22171255 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 280
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 48, 35

Conread position: 108-288
Cow position: chr27:15408057-15408234 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 108, 0

Conread position: 108-348
Cow position: chr27:27449073-27449310 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 201, 127

Conread position: 110-348
Cow position: chr27:2900168-2899936 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 31, 0

Conread position: 112-370
Cow position: chr27:651597-651855 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 34, 24

Conread position: 112-386
Cow position: chr27:3340148-3339874 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 24

Conread position: 113-324
Cow position: chr27:27292494-27292702 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 122, 0

Conread position: 114-261
Cow position: chr27:6320453-6320599 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 6, 0

Conread position: 114-288
Cow position: chr27:20634807-20634635 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 115-272
Cow position: chr27:12001271-12001428 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 21

Conread position: 115-289
Cow position: chr27:25411159-25411336 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 142, 17

Conread position: 115-330
Cow position: chr27:16182421-16182206 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 198, 187

Conread position: 116-291
Cow position: chr27:17462793-17462970 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 56, 25

Conread position: 116-459
Cow position: chr27:25791169-25790819 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 232
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 174

Conread position: 119-266
Cow position: chr27:27240045-27240191 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 116, 0

Conread position: 119-284
Cow position: chr27:16238249-16238084 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 119-288
Cow position: chr27:7212368-7212538 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 119-493
Cow position: chr27:24227440-24227815 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 258
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 191, 183

Conread position: 120-370
Cow position: chr27:11417540-11417790 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 26, 16

Conread position: 122-290
Cow position: chr27:17925970-17926136 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 106

Conread position: 122-381
Cow position: chr27:26330718-26330981 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 89, 0

Conread position: 124-348
Cow position: chr27:26341273-26341497 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 22, 12

Conread position: 125-233
Cow position: chr27:10080377-10080485 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 125-269
Cow position: chr27:26367015-26367159 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 125-288
Cow position: chr27:15643733-15643896 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 135
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 21, 11

Conread position: 125-370
Cow position: chr27:31365876-31365631 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 125-459
Cow position: chr27:26427781-26428117 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 229
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 185, 177

Conread position: 127-290
Cow position: chr27:11355898-11356058 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 154, 122

Conread position: 128-270
Cow position: chr27:4829471-4829609 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 119, 55

Conread position: 128-349
Cow position: chr27:22603506-22603286 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 180, 107

Conread position: 128-468
Cow position: chr27:19718263-19717928 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 229
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 49, 123

Conread position: 130-348
Cow position: chr27:299041-299259 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 153, 167

Conread position: 132-324
Cow position: chr27:26796319-26796120 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 132-348
Cow position: chr27:30198615-30198399 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 137-374
Cow position: chr27:4805575-4805810 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 162
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 162, 35

Conread position: 140-329
Cow position: chr27:1903396-1903206 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 96

Conread position: 141-381
Cow position: chr27:5882182-5882421 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 143-246
Cow position: chr27:1386975-1386873 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 143-249
Cow position: chr27:27631031-27631137 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 143-253
Cow position: chr27:19647332-19647438 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 143-320
Cow position: chr27:30677228-30677052 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 88

Conread position: 143-322
Cow position: chr27:31371963-31372143 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 5, 144

Conread position: 143-373
Cow position: chr27:14129832-14129605 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 147, 137

Conread position: 143-374
Cow position: chr27:8961940-8962170 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 167, 149

Conread position: 143-379
Cow position: chr27:20372499-20372733 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 161
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 150, 42

Conread position: 143-389
Cow position: chr27:6674564-6674324 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 143-473
Cow position: chr27:8629545-8629874 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 217
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 250, 159

Conread position: 143-477
Cow position: chr27:23070034-23070364 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 226
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 318, 102

Conread position: 143-495
Cow position: chr27:27038512-27038860 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 245
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 85, 14

Conread position: 144-269
Cow position: chr27:435570-435447 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 144-349
Cow position: chr27:21564984-21564777 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 77, 204

Conread position: 145-284
Cow position: chr27:13878043-13878182 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 119
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 145-288
Cow position: chr27:31397495-31397352 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 122
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 145-301
Cow position: chr27:28477156-28477306 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 145-346
Cow position: chr27:30231952-30232152 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 145-370
Cow position: chr27:2429908-2430133 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 145-370
Cow position: chr27:3690800-3690575 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 145-370
Cow position: chr27:13895537-13895762 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 145-370
Cow position: chr27:28982578-28982803 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 145-480
Cow position: chr27:30868413-30868748 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 226
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 165, 141

Conread position: 146-346
Cow position: chr27:11634301-11634101 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 145, 163

Conread position: 146-347
Cow position: chr27:20636175-20635977 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 154, 0

Conread position: 149-492
Cow position: chr27:4385745-4386082 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 234
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 156, 33

Conread position: 150-288
Cow position: chr27:18909574-18909431 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 151-370
Cow position: chr27:66910-67126 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 16, 0

Conread position: 152-269
Cow position: chr27:12411839-12411956 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 153-348
Cow position: chr27:18922769-18922575 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 160, 139

Conread position: 154-268
Cow position: chr27:26046709-26046595 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 12

Conread position: 154-346
Cow position: chr27:26833491-26833307 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 155-349
Cow position: chr27:15342815-15343002 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 98, 79

Conread position: 157-381
Cow position: chr27:26424276-26424496 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 170, 10

Conread position: 158-324
Cow position: chr27:3231440-3231275 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 149, 84

Conread position: 158-346
Cow position: chr27:9922252-9922064 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 131, 38

Conread position: 158-370
Cow position: chr27:2590035-2589823 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 158-391
Cow position: chr27:16099703-16099940 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 86, 124

Conread position: 160-290
Cow position: chr27:29815917-29815788 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 122, 27

Conread position: 160-370
Cow position: chr27:197608-197398 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 160-381
Cow position: chr27:18218856-18218635 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 161-373
Cow position: chr27:27578881-27578672 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 7, 0

Conread position: 161-449
Cow position: chr27:24477711-24477439 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 194
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 228, 125

Conread position: 161-450
Cow position: chr27:16513571-16513859 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 152, 134

Conread position: 162-346
Cow position: chr27:6899404-6899589 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 162-356
Cow position: chr27:8534893-8534696 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 135
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 143, 117

Conread position: 162-459
Cow position: chr27:23576229-23576523 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 190
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 235

Conread position: 162-477
Cow position: chr27:18544308-18543989 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 207
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 148, 130

Conread position: 163-525
Cow position: chr27:11535789-11536153 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 249
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 126, 72

Conread position: 164-370
Cow position: chr27:221749-221955 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 164-388
Cow position: chr27:13860437-13860655 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 167-477
Cow position: chr27:15858786-15859093 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 203
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 147, 113

Conread position: 169-370
Cow position: chr27:23124053-23124249 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 148, 66

Conread position: 170-450
Cow position: chr27:28207100-28206817 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 188
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 143, 132

Conread position: 171-370
Cow position: chr27:27809765-27809964 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 172-349
Cow position: chr27:16960496-16960320 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 7, 20

Conread position: 172-349
Cow position: chr27:26787064-26787240 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 173, 0

Conread position: 175-349
Cow position: chr27:9978123-9977950 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 135, 65

Conread position: 177-477
Cow position: chr27:28189922-28190219 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 199
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 105, 119

Conread position: 177-477
Cow position: chr27:30362537-30362241 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 203
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 280, 10

Conread position: 185-498
Cow position: chr27:28931502-28931818 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 21, 52

Conread position: 186-370
Cow position: chr27:12502844-12503027 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 107, 114

Conread position: 187-289
Cow position: chr27:7971855-7971753 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 191-348
Cow position: chr27:1522893-1523050 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 194-289
Cow position: chr27:14633116-14633021 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 197-370
Cow position: chr27:773428-773255 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 197-370
Cow position: chr27:8932539-8932366 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 47, 40

Conread position: 200-348
Cow position: chr27:19552156-19552304 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 203-519
Cow position: chr27:31372711-31373025 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 107, 54

Conread position: 206-370
Cow position: chr27:29198279-29198443 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 208-370
Cow position: chr27:667998-668160 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 208-492
Cow position: chr27:2957668-2957386 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 189
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 105, 40

Conread position: 213-519
Cow position: chr27:27843734-27844040 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 196
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 198, 9

Show alignments to all cow chromosomes.