Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-MPL-MPL384_8_I21.5
        

               Conread position:
               1-195
               

               Cow position:
               chr3:23944586-23944777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               123, 69
               

               Conread position:
               1-223
               

               Cow position:
               chr3:46225946-46226171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               124, 58
               

               Conread position:
               1-253
               

               Cow position:
               chr3:1483651-1483904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               132, 86
               

               Conread position:
               1-322
               

               Cow position:
               chr3:34086597-34086280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               144, 12
               

               Conread position:
               1-332
               

               Cow position:
               chr3:74140247-74139910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               125, 254
               

               Conread position:
               1-346
               

               Cow position:
               chr3:38252443-38252799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               127, 66
               

               Conread position:
               2-122
               

               Cow position:
               chr3:80276999-80276878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               2-131
               

               Cow position:
               chr3:5461583-5461712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               90, 37
               

               Conread position:
               2-131
               

               Cow position:
               chr3:13886748-13886877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-131
               

               Cow position:
               chr3:39867510-39867639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-192
               

               Cow position:
               chr3:32878982-32878785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               2-195
               

               Cow position:
               chr3:25802800-25802999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               2-207
               

               Cow position:
               chr3:4326471-4326673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               120, 25
               

               Conread position:
               2-217
               

               Cow position:
               chr3:39949458-39949247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               72, 46
               

               Conread position:
               2-218
               

               Cow position:
               chr3:63198924-63199156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               2-221
               

               Cow position:
               chr3:65276528-65276310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               132, 174
               

               Conread position:
               2-223
               

               Cow position:
               chr3:27784591-27784818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               2-228
               

               Cow position:
               chr3:74083994-74084225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               2-231
               

               Cow position:
               chr3:3791930-3792165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               126, 76
               

               Conread position:
               2-231
               

               Cow position:
               chr3:80740045-80740283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               82, 71
               

               Conread position:
               2-233
               

               Cow position:
               chr3:34099675-34099443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               123, 70
               

               Conread position:
               2-238
               

               Cow position:
               chr3:16868573-16868338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               165, 131
               

               Conread position:
               2-239
               

               Cow position:
               chr3:2226499-2226744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               2-240
               

               Cow position:
               chr3:12076245-12076001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               2-245
               

               Cow position:
               chr3:56685558-56685802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               44, 68
               

               Conread position:
               2-246
               

               Cow position:
               chr3:7467337-7467091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               138, 19
               

               Conread position:
               2-246
               

               Cow position:
               chr3:21025795-21025541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               2-246
               

               Cow position:
               chr3:43424761-43425008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               72, 163
               

               Conread position:
               2-248
               

               Cow position:
               chr3:49253067-49252827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               68, 109
               

               Conread position:
               2-248
               

               Cow position:
               chr3:53158993-53159246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               56, 165
               

               Conread position:
               2-249
               

               Cow position:
               chr3:30930140-30930387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               127, 61
               

               Conread position:
               2-252
               

               Cow position:
               chr3:14258453-14258209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               2-252
               

               Cow position:
               chr3:55444784-55445040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               45, 172
               

               Conread position:
               2-253
               

               Cow position:
               chr3:79978563-79978307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               72, 12
               

               Conread position:
               2-254
               

               Cow position:
               chr3:45342587-45342841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               58, 40
               

               Conread position:
               2-254
               

               Cow position:
               chr3:64318357-64318617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               123, 165
               

               Conread position:
               2-255
               

               Cow position:
               chr3:43658255-43658001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               89, 37
               

               Conread position:
               2-255
               

               Cow position:
               chr3:58129932-58130175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               2-255
               

               Cow position:
               chr3:77071099-77070844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               123, 132
               

               Conread position:
               2-256
               

               Cow position:
               chr3:13330328-13330077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               126, 45
               

               Conread position:
               2-257
               

               Cow position:
               chr3:82075636-82075370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               2-259
               

               Cow position:
               chr3:38324263-38324003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               72, 46
               

               Conread position:
               2-259
               

               Cow position:
               chr3:43007965-43007706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               123, 28
               

               Conread position:
               2-259
               

               Cow position:
               chr3:53414637-53414900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               2-259
               

               Cow position:
               chr3:77467327-77467594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               64, 223
               

               Conread position:
               2-259
               

               Cow position:
               chr3:80929661-80929420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               186, 102
               

               Conread position:
               2-264
               

               Cow position:
               chr3:73936570-73936300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               2-266
               

               Cow position:
               chr3:8923224-8923490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 126
               

               Conread position:
               2-266
               

               Cow position:
               chr3:15746971-15746712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               238, 134
               

               Conread position:
               2-268
               

               Cow position:
               chr3:35509830-35510105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               2-279
               

               Cow position:
               chr3:7114944-7115225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               123, 142
               

               Conread position:
               2-279
               

               Cow position:
               chr3:36128695-36128973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               131, 81
               

               Conread position:
               2-284
               

               Cow position:
               chr3:18219103-18218808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               2-284
               

               Cow position:
               chr3:25062284-25062573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               140, 109
               

               Conread position:
               2-284
               

               Cow position:
               chr3:35820352-35820638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               117, 247
               

               Conread position:
               2-285
               

               Cow position:
               chr3:22353592-22353894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               2-287
               

               Cow position:
               chr3:42423868-42423583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 19
               

               Conread position:
               2-288
               

               Cow position:
               chr3:2295347-2295631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               124, 54
               

               Conread position:
               2-288
               

               Cow position:
               chr3:8234875-8235166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               119, 19
               

               Conread position:
               2-290
               

               Cow position:
               chr3:62075732-62076020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               133, 220
               

               Conread position:
               2-291
               

               Cow position:
               chr3:47468768-47468473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               123, 158
               

               Conread position:
               2-292
               

               Cow position:
               chr3:67744026-67743747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               126, 48
               

               Conread position:
               2-322
               

               Cow position:
               chr3:17899281-17899603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 234
               

               Conread position:
               2-324
               

               Cow position:
               chr3:18758780-18758452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 262
               

               Conread position:
               2-325
               

               Cow position:
               chr3:9403625-9403308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               122, 163
               

               Conread position:
               2-328
               

               Cow position:
               chr3:17281539-17281216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               126, 65
               

               Conread position:
               2-328
               

               Cow position:
               chr3:39945313-39944979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               231
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               25, 244
               

               Conread position:
               2-329
               

               Cow position:
               chr3:60331403-60331737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               236
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               35, 65
               

               Conread position:
               2-337
               

               Cow position:
               chr3:49132791-49132457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 46
               

               Conread position:
               2-344
               

               Cow position:
               chr3:53568426-53568763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               126, 13
               

               Conread position:
               2-344
               

               Cow position:
               chr3:58077987-58077645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               244
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               69, 262
               

               Conread position:
               2-346
               

               Cow position:
               chr3:15079615-15079261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               77, 194
               

               Conread position:
               2-346
               

               Cow position:
               chr3:15657964-15658294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               47, 29
               

               Conread position:
               2-346
               

               Cow position:
               chr3:19830525-19830187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               234
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               120, 30
               

               Conread position:
               2-346
               

               Cow position:
               chr3:22083665-22083331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               102, 65
               

               Conread position:
               2-346
               

               Cow position:
               chr3:26554265-26553905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 323
               

               Conread position:
               2-346
               

               Cow position:
               chr3:34874246-34873923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               154, 28
               

               Conread position:
               2-346
               

               Cow position:
               chr3:46345563-46345207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               134, 19
               

               Conread position:
               2-346
               

               Cow position:
               chr3:51147192-51146859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 90
               

               Conread position:
               2-346
               

               Cow position:
               chr3:55985142-55985477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               239
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               120, 49
               

               Conread position:
               2-346
               

               Cow position:
               chr3:58866020-58865652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               254
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               2-346
               

               Cow position:
               chr3:59668227-59668571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               47, 285
               

               Conread position:
               2-346
               

               Cow position:
               chr3:62896472-62896116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               72, 57
               

               Conread position:
               2-346
               

               Cow position:
               chr3:68342791-68342447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               243
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               126, 70
               

               Conread position:
               2-346
               

               Cow position:
               chr3:70913630-70913272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               123, 193
               

               Conread position:
               2-346
               

               Cow position:
               chr3:72104826-72104481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               74, 220
               

               Conread position:
               2-346
               

               Cow position:
               chr3:72501627-72501974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               63, 71
               

               Conread position:
               2-346
               

               Cow position:
               chr3:76188154-76188501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 162
               

               Conread position:
               2-346
               

               Cow position:
               chr3:76927037-76927372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               132, 88
               

               Conread position:
               2-346
               

               Cow position:
               chr3:77623827-77624171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               120, 26
               

               Conread position:
               2-346
               

               Cow position:
               chr3:82513649-82513996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               239
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               120, 63
               

               Conread position:
               2-346
               

               Cow position:
               chr3:84152772-84153132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               247
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               2-348
               

               Cow position:
               chr3:5950963-5950621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               2-348
               

               Cow position:
               chr3:8440747-8440405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               130, 65
               

               Conread position:
               2-348
               

               Cow position:
               chr3:26474615-26474970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 65
               

               Conread position:
               2-348
               

               Cow position:
               chr3:45881364-45881718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 121
               

               Conread position:
               2-348
               

               Cow position:
               chr3:74849581-74849230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 296
               

               Conread position:
               2-356
               

               Cow position:
               chr3:49297367-49297739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               238
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               126, 286
               

               Conread position:
               2-370
               

               Cow position:
               chr3:51666349-51666716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 5
               

               Conread position:
               2-370
               

               Cow position:
               chr3:62611376-62611742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 48
               

               Conread position:
               2-373
               

               Cow position:
               chr3:68888941-68888570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 134
               

               Conread position:
               2-381
               

               Cow position:
               chr3:59865111-59865489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 296
               

               Conread position:
               2-382
               

               Cow position:
               chr3:58207006-58206609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               251
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               71, 229
               

               Conread position:
               2-388
               

               Cow position:
               chr3:5536445-5536061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               268
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               140, 161
               

               Conread position:
               2-388
               

               Cow position:
               chr3:24262228-24261851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               62, 17
               

               Conread position:
               2-388
               

               Cow position:
               chr3:54340941-54340565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               299, 137
               

               Conread position:
               2-391
               

               Cow position:
               chr3:72603808-72604202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 161
               

               Conread position:
               2-394
               

               Cow position:
               chr3:54346779-54346372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 261
               

               Conread position:
               3-117
               

               Cow position:
               chr3:13034863-13034749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-117
               

               Cow position:
               chr3:24639774-24639888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-120
               

               Cow position:
               chr3:37020591-37020474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-121
               

               Cow position:
               chr3:68515044-68514926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-125
               

               Cow position:
               chr3:28922628-28922751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               3-130
               

               Cow position:
               chr3:14878463-14878335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               3-130
               

               Cow position:
               chr3:70469605-70469478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-131
               

               Cow position:
               chr3:14285360-14285492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               3-133
               

               Cow position:
               chr3:21955615-21955745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-133
               

               Cow position:
               chr3:55100416-55100287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               3-134
               

               Cow position:
               chr3:19977967-19977836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-134
               

               Cow position:
               chr3:30609924-30610055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-134
               

               Cow position:
               chr3:43084850-43084981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-138
               

               Cow position:
               chr3:8716600-8716735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-140
               

               Cow position:
               chr3:84598847-84598710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-153
               

               Cow position:
               chr3:11019078-11019228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-155
               

               Cow position:
               chr3:11026258-11026408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               3-156
               

               Cow position:
               chr3:1516031-1515878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-159
               

               Cow position:
               chr3:25484772-25484928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-162
               

               Cow position:
               chr3:28871540-28871388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               3-163
               

               Cow position:
               chr3:49389466-49389306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-163
               

               Cow position:
               chr3:49462938-49462779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               145, 133
               

               Conread position:
               3-165
               

               Cow position:
               chr3:28908761-28908596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               3-166
               

               Cow position:
               chr3:12676063-12675894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               3-166
               

               Cow position:
               chr3:43085088-43085251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-167
               

               Cow position:
               chr3:10346592-10346755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               3-168
               

               Cow position:
               chr3:7386071-7385906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-180
               

               Cow position:
               chr3:30463782-30463608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               144, 88
               

               Conread position:
               3-188
               

               Cow position:
               chr3:51603270-51603455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-189
               

               Cow position:
               chr3:31780775-31780961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-190
               

               Cow position:
               chr3:21779145-21778958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               149
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-191
               

               Cow position:
               chr3:43825210-43825021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               116, 134
               

               Conread position:
               3-192
               

               Cow position:
               chr3:14065193-14065004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               151
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-192
               

               Cow position:
               chr3:56636720-56636913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               3-198
               

               Cow position:
               chr3:41053057-41053252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-201
               

               Cow position:
               chr3:70894207-70894399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               3-204
               

               Cow position:
               chr3:2851605-2851412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               3-205
               

               Cow position:
               chr3:202998-202791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               121, 64
               

               Conread position:
               3-209
               

               Cow position:
               chr3:6171104-6171310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               163
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-209
               

               Cow position:
               chr3:42358872-42358666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               69, 81
               

               Conread position:
               3-217
               

               Cow position:
               chr3:59333191-59333409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               125, 80
               

               Conread position:
               3-219
               

               Cow position:
               chr3:18606545-18606760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               3-219
               

               Cow position:
               chr3:55094673-55094883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               44, 95
               

               Conread position:
               3-223
               

               Cow position:
               chr3:11509235-11509014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               71, 48
               

               Conread position:
               3-224
               

               Cow position:
               chr3:49388285-49388507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               123, 112
               

               Conread position:
               3-228
               

               Cow position:
               chr3:2524908-2525133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-228
               

               Cow position:
               chr3:74700186-74699955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 101
               

               Conread position:
               3-230
               

               Cow position:
               chr3:49732146-49731910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               96, 113
               

               Conread position:
               3-231
               

               Cow position:
               chr3:73764715-73764479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               3-232
               

               Cow position:
               chr3:4780807-4781042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               3-232
               

               Cow position:
               chr3:18557654-18557888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               129, 64
               

               Conread position:
               3-233
               

               Cow position:
               chr3:9639397-9639169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               3-233
               

               Cow position:
               chr3:38863308-38863537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 122
               

               Conread position:
               3-233
               

               Cow position:
               chr3:50205205-50205435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-233
               

               Cow position:
               chr3:65581576-65581340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               3-233
               

               Cow position:
               chr3:70074471-70074243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 49
               

               Conread position:
               3-233
               

               Cow position:
               chr3:77550588-77550815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               133, 28
               

               Conread position:
               3-241
               

               Cow position:
               chr3:1299720-1299961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               121, 92
               

               Conread position:
               3-241
               

               Cow position:
               chr3:37628515-37628758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               76, 64
               

               Conread position:
               3-242
               

               Cow position:
               chr3:17757730-17757487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               124, 19
               

               Conread position:
               3-242
               

               Cow position:
               chr3:56476048-56476290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               3-243
               

               Cow position:
               chr3:39172047-39171800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               3-243
               

               Cow position:
               chr3:51597544-51597788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               121, 199
               

               Conread position:
               3-244
               

               Cow position:
               chr3:14602282-14602042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 85
               

               Conread position:
               3-244
               

               Cow position:
               chr3:66603752-66603511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-245
               

               Cow position:
               chr3:63202855-63203102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               3-246
               

               Cow position:
               chr3:4031380-4031623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-246
               

               Cow position:
               chr3:52418399-52418645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 210
               

               Conread position:
               3-246
               

               Cow position:
               chr3:58959166-58959408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               3-247
               

               Cow position:
               chr3:25691196-25691438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               3-247
               

               Cow position:
               chr3:74879194-74878954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 0
               

               Conread position:
               3-249
               

               Cow position:
               chr3:2866022-2865776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-249
               

               Cow position:
               chr3:20780416-20780168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 55
               

               Conread position:
               3-249
               

               Cow position:
               chr3:29507012-29507261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               128, 64
               

               Conread position:
               3-250
               

               Cow position:
               chr3:45744143-45744391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               202, 50
               

               Conread position:
               3-251
               

               Cow position:
               chr3:589033-589281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-251
               

               Cow position:
               chr3:52607452-52607713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               170, 0
               

               Conread position:
               3-253
               

               Cow position:
               chr3:58350042-58350292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               121, 62
               

               Conread position:
               3-254
               

               Cow position:
               chr3:20389950-20389694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               3-254
               

               Cow position:
               chr3:25753916-25754165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               3-255
               

               Cow position:
               chr3:4049665-4049919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-255
               

               Cow position:
               chr3:11819422-11819672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 191
               

               Conread position:
               3-255
               

               Cow position:
               chr3:18352729-18352475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               131, 19
               

               Conread position:
               3-255
               

               Cow position:
               chr3:27867287-27867544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 74
               

               Conread position:
               3-255
               

               Cow position:
               chr3:33693084-33693339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               120, 64
               

               Conread position:
               3-255
               

               Cow position:
               chr3:34392652-34392406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               3-255
               

               Cow position:
               chr3:35578422-35578672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               124, 15
               

               Conread position:
               3-255
               

               Cow position:
               chr3:51506384-51506640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               125, 64
               

               Conread position:
               3-255
               

               Cow position:
               chr3:76923677-76923425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 64
               

               Conread position:
               3-256
               

               Cow position:
               chr3:22220768-22221017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               3-256
               

               Cow position:
               chr3:64281482-64281252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               3-259
               

               Cow position:
               chr3:56925-56677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               3-259
               

               Cow position:
               chr3:9641012-9641264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 0
               

               Conread position:
               3-259
               

               Cow position:
               chr3:32869577-32869841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               118, 18
               

               Conread position:
               3-259
               

               Cow position:
               chr3:34115260-34115011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               86, 7
               

               Conread position:
               3-259
               

               Cow position:
               chr3:73956460-73956714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               122, 45
               

               Conread position:
               3-259
               

               Cow position:
               chr3:80759841-80760097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-263
               

               Cow position:
               chr3:42371581-42371321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-265
               

               Cow position:
               chr3:3061880-3062139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 38
               

               Conread position:
               3-265
               

               Cow position:
               chr3:45668421-45668164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 11
               

               Conread position:
               3-267
               

               Cow position:
               chr3:57743187-57743454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 141
               

               Conread position:
               3-267
               

               Cow position:
               chr3:73459688-73459951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               3-267
               

               Cow position:
               chr3:75157726-75157468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               3-268
               

               Cow position:
               chr3:36145943-36145674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               122, 244
               

               Conread position:
               3-268
               

               Cow position:
               chr3:51338544-51338279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-268
               

               Cow position:
               chr3:64024409-64024145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 0
               

               Conread position:
               3-269
               

               Cow position:
               chr3:9590923-9590653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               196
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               246, 133
               

               Conread position:
               3-269
               

               Cow position:
               chr3:12668325-12668580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               64, 97
               

               Conread position:
               3-269
               

               Cow position:
               chr3:16333049-16333307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 73
               

               Conread position:
               3-269
               

               Cow position:
               chr3:29573449-29573183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 234
               

               Conread position:
               3-269
               

               Cow position:
               chr3:54877273-54877539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-269
               

               Cow position:
               chr3:58034036-58033773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 85
               

               Conread position:
               3-269
               

               Cow position:
               chr3:64655837-64656102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               3-270
               

               Cow position:
               chr3:30908488-30908215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 64
               

               Conread position:
               3-270
               

               Cow position:
               chr3:69419453-69419185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 94
               

               Conread position:
               3-272
               

               Cow position:
               chr3:22739284-22739014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               3-272
               

               Cow position:
               chr3:23216701-23216431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 97
               

               Conread position:
               3-272
               

               Cow position:
               chr3:63238394-63238121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               110, 39
               

               Conread position:
               3-272
               

               Cow position:
               chr3:65536747-65537017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-273
               

               Cow position:
               chr3:30003939-30004213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               139, 69
               

               Conread position:
               3-274
               

               Cow position:
               chr3:24585595-24585326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               85, 54
               

               Conread position:
               3-274
               

               Cow position:
               chr3:61172023-61171767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               145, 101
               

               Conread position:
               3-276
               

               Cow position:
               chr3:11254682-11254415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 0
               

               Conread position:
               3-279
               

               Cow position:
               chr3:24344231-24343955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-279
               

               Cow position:
               chr3:84807904-84807628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 254
               

               Conread position:
               3-281
               

               Cow position:
               chr3:54506246-54506513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               3-283
               

               Cow position:
               chr3:58766761-58767033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 64
               

               Conread position:
               3-284
               

               Cow position:
               chr3:21302966-21302686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               3-284
               

               Cow position:
               chr3:52486749-52487027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               3-284
               

               Cow position:
               chr3:55836450-55836170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 74
               

               Conread position:
               3-284
               

               Cow position:
               chr3:60389114-60389389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-285
               

               Cow position:
               chr3:55272568-55272296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               3-285
               

               Cow position:
               chr3:74847294-74847006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               210
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               63, 240
               

               Conread position:
               3-286
               

               Cow position:
               chr3:3776511-3776782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 78
               

               Conread position:
               3-286
               

               Cow position:
               chr3:45700299-45700581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               3-287
               

               Cow position:
               chr3:29328301-29328017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-287
               

               Cow position:
               chr3:67275486-67275197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               127, 123
               

               Conread position:
               3-288
               

               Cow position:
               chr3:1831108-1830814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               3-288
               

               Cow position:
               chr3:3031863-3032148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 234
               

               Conread position:
               3-288
               

               Cow position:
               chr3:8591864-8591594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               3-288
               

               Cow position:
               chr3:13311366-13311083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 64
               

               Conread position:
               3-288
               

               Cow position:
               chr3:14280308-14280593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-288
               

               Cow position:
               chr3:16291107-16290817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 88
               

               Conread position:
               3-288
               

               Cow position:
               chr3:19959227-19959512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-288
               

               Cow position:
               chr3:20225620-20225905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-288
               

               Cow position:
               chr3:22089816-22089533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               3-288
               

               Cow position:
               chr3:34556757-34556471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 0
               

               Conread position:
               3-288
               

               Cow position:
               chr3:35109859-35110144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-288
               

               Cow position:
               chr3:36670960-36670672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               3-288
               

               Cow position:
               chr3:38769115-38768826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               67, 196
               

               Conread position:
               3-288
               

               Cow position:
               chr3:38870198-38870483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-288
               

               Cow position:
               chr3:45184369-45184096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-288
               

               Cow position:
               chr3:49119569-49119283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               209
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               109, 53
               

               Conread position:
               3-288
               

               Cow position:
               chr3:51256571-51256856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-288
               

               Cow position:
               chr3:59648723-59649009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 165
               

               Conread position:
               3-288
               

               Cow position:
               chr3:61191452-61191168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               3-288
               

               Cow position:
               chr3:65391485-65391769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               3-288
               

               Cow position:
               chr3:68379241-68379527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               11, 138
               

               Conread position:
               3-288
               

               Cow position:
               chr3:70519672-70519381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               68, 77
               

               Conread position:
               3-288
               

               Cow position:
               chr3:73639194-73639474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               12, 65
               

               Conread position:
               3-289
               

               Cow position:
               chr3:36238547-36238821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               3-289
               

               Cow position:
               chr3:48252362-48252647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 25
               

               Conread position:
               3-289
               

               Cow position:
               chr3:80594708-80594995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               116, 64
               

               Conread position:
               3-290
               

               Cow position:
               chr3:6264970-6265259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 0
               

               Conread position:
               3-290
               

               Cow position:
               chr3:29595836-29596119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 0
               

               Conread position:
               3-290
               

               Cow position:
               chr3:48073548-48073271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               3-290
               

               Cow position:
               chr3:68155944-68156229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 233
               

               Conread position:
               3-291
               

               Cow position:
               chr3:6068238-6068526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-291
               

               Cow position:
               chr3:11122909-11123197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-291
               

               Cow position:
               chr3:31078732-31078443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               3-291
               

               Cow position:
               chr3:67196696-67196408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-291
               

               Cow position:
               chr3:69273528-69273816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-291
               

               Cow position:
               chr3:82398090-82398374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 44
               

               Conread position:
               3-302
               

               Cow position:
               chr3:13084909-13084605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 220
               

               Conread position:
               3-302
               

               Cow position:
               chr3:56705121-56704821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               49, 243
               

               Conread position:
               3-305
               

               Cow position:
               chr3:19794055-19793754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 49
               

               Conread position:
               3-322
               

               Cow position:
               chr3:34041027-34041347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 134
               

               Conread position:
               3-323
               

               Cow position:
               chr3:18184539-18184852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 64
               

               Conread position:
               3-324
               

               Cow position:
               chr3:12932399-12932720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-324
               

               Cow position:
               chr3:17100532-17100202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 144
               

               Conread position:
               3-324
               

               Cow position:
               chr3:34819756-34819435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-324
               

               Cow position:
               chr3:53223192-53222857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 73
               

               Conread position:
               3-324
               

               Cow position:
               chr3:56302176-56301838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               93, 174
               

               Conread position:
               3-324
               

               Cow position:
               chr3:58951091-58951406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 35
               

               Conread position:
               3-324
               

               Cow position:
               chr3:60093112-60092798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 137
               

               Conread position:
               3-324
               

               Cow position:
               chr3:65236481-65236810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 25
               

               Conread position:
               3-324
               

               Cow position:
               chr3:69962249-69961926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 27
               

               Conread position:
               3-341
               

               Cow position:
               chr3:41315744-41316086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               56, 229
               

               Conread position:
               3-344
               

               Cow position:
               chr3:56914509-56914850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               123, 85
               

               Conread position:
               3-346
               

               Cow position:
               chr3:764039-764386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               81, 64
               

               Conread position:
               3-346
               

               Cow position:
               chr3:10932755-10933101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               122, 256
               

               Conread position:
               3-346
               

               Cow position:
               chr3:20471905-20471553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               143, 74
               

               Conread position:
               3-346
               

               Cow position:
               chr3:26669652-26669299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               69, 238
               

               Conread position:
               3-346
               

               Cow position:
               chr3:67626078-67625736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               123, 49
               

               Conread position:
               3-346
               

               Cow position:
               chr3:69590656-69590319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               119, 74
               

               Conread position:
               3-346
               

               Cow position:
               chr3:75479484-75479819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 53
               

               Conread position:
               3-346
               

               Cow position:
               chr3:80444874-80444531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-347
               

               Cow position:
               chr3:55110379-55110036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 0
               

               Conread position:
               3-347
               

               Cow position:
               chr3:63176972-63177319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 311
               

               Conread position:
               3-347
               

               Cow position:
               chr3:66859243-66859587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               122, 30
               

               Conread position:
               3-347
               

               Cow position:
               chr3:71230870-71231214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 293
               

               Conread position:
               3-348
               

               Cow position:
               chr3:2573160-2573505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr3:2903832-2903481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 64
               

               Conread position:
               3-348
               

               Cow position:
               chr3:3596278-3595933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr3:6754318-6754661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 18
               

               Conread position:
               3-348
               

               Cow position:
               chr3:7245476-7245131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr3:7678127-7678480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               127, 45
               

               Conread position:
               3-348
               

               Cow position:
               chr3:7767546-7767891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr3:13722219-13721875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr3:14144948-14144603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr3:15233530-15233186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr3:15688056-15687712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 80
               

               Conread position:
               3-348
               

               Cow position:
               chr3:15954612-15954268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               3-348
               

               Cow position:
               chr3:20388838-20388493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr3:20804699-20805044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr3:24853110-24852778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               306, 7
               

               Conread position:
               3-348
               

               Cow position:
               chr3:26722187-26721838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 282
               

               Conread position:
               3-348
               

               Cow position:
               chr3:26892123-26892468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr3:28933536-28933881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr3:30567746-30568092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 136
               

               Conread position:
               3-348
               

               Cow position:
               chr3:30615309-30614977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 69
               

               Conread position:
               3-348
               

               Cow position:
               chr3:31022305-31022637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 69
               

               Conread position:
               3-348
               

               Cow position:
               chr3:38497397-38497760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 308
               

               Conread position:
               3-348
               

               Cow position:
               chr3:41569327-41568982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr3:43463825-43463480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr3:47758341-47758686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr3:49907402-49907057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr3:49930613-49930268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr3:58912670-58913015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr3:59473582-59473921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 32
               

               Conread position:
               3-348
               

               Cow position:
               chr3:64015538-64015193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-348
               

               Cow position:
               chr3:73211461-73211793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               3-348
               

               Cow position:
               chr3:78520678-78521023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr3:80082353-80082009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 283
               

               Conread position:
               3-349
               

               Cow position:
               chr3:16226507-16226847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               3-349
               

               Cow position:
               chr3:20379087-20378750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 133
               

               Conread position:
               3-349
               

               Cow position:
               chr3:54766586-54766930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 269
               

               Conread position:
               3-349
               

               Cow position:
               chr3:75771502-75771157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               332, 0
               

               Conread position:
               3-349
               

               Cow position:
               chr3:80054074-80053725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 80
               

               Conread position:
               3-356
               

               Cow position:
               chr3:43528773-43528420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               310, 299
               

               Conread position:
               3-356
               

               Cow position:
               chr3:60892096-60892449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 155
               

               Conread position:
               3-364
               

               Cow position:
               chr3:56328821-56329182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 130
               

               Conread position:
               3-369
               

               Cow position:
               chr3:5475172-5475532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 109
               

               Conread position:
               3-369
               

               Cow position:
               chr3:12982255-12981890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-369
               

               Cow position:
               chr3:12986721-12986356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-369
               

               Cow position:
               chr3:21593914-21594280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 53
               

               Conread position:
               3-369
               

               Cow position:
               chr3:34503506-34503140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-369
               

               Cow position:
               chr3:47077980-47077614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-369
               

               Cow position:
               chr3:47987095-47987465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 0
               

               Conread position:
               3-369
               

               Cow position:
               chr3:53787763-53787397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-369
               

               Cow position:
               chr3:57022047-57022404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 63
               

               Conread position:
               3-370
               

               Cow position:
               chr3:579809-580179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 136
               

               Conread position:
               3-370
               

               Cow position:
               chr3:1034720-1035087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:1438195-1438562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:2075413-2075780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr3:2833906-2833539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:2922263-2922629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:3553020-3553379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr3:6384134-6384499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 64
               

               Conread position:
               3-370
               

               Cow position:
               chr3:6714740-6715107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:6838665-6839031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 129
               

               Conread position:
               3-370
               

               Cow position:
               chr3:6884778-6885145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:7155174-7154807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:8330908-8331276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:10448837-10448471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 64
               

               Conread position:
               3-370
               

               Cow position:
               chr3:11418179-11418546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:12797429-12797060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 134
               

               Conread position:
               3-370
               

               Cow position:
               chr3:13248388-13248021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:13326700-13326333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:13361079-13361446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:14213023-14213382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 86
               

               Conread position:
               3-370
               

               Cow position:
               chr3:14261064-14261432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 134
               

               Conread position:
               3-370
               

               Cow position:
               chr3:14438356-14437990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:14680714-14681081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr3:14888932-14889299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:14923284-14923650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 48
               

               Conread position:
               3-370
               

               Cow position:
               chr3:15417099-15417466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:16620121-16619754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 27
               

               Conread position:
               3-370
               

               Cow position:
               chr3:18052289-18051922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:18111511-18111153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 83
               

               Conread position:
               3-370
               

               Cow position:
               chr3:18875051-18874686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:18907493-18907850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:19691862-19691498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:19711851-19711485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 296
               

               Conread position:
               3-370
               

               Cow position:
               chr3:19797471-19797103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 134
               

               Conread position:
               3-370
               

               Cow position:
               chr3:19827827-19827466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr3:19881682-19882049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:19884086-19884453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:20476131-20476498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:20795925-20796292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:20843937-20843570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:22490255-22490621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr3:23598406-23598039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:24557943-24557576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:26742244-26741874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:26801717-26802080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:27687730-27687363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 199
               

               Conread position:
               3-370
               

               Cow position:
               chr3:28472007-28472358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:28764790-28764423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:29461552-29461185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:30301622-30301989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:30329037-30328670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:30351916-30352281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr3:30753215-30753582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:30815800-30816167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:32619380-32619011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 134
               

               Conread position:
               3-370
               

               Cow position:
               chr3:32769443-32769812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 134
               

               Conread position:
               3-370
               

               Cow position:
               chr3:35043792-35044159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:35342234-35341867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:35612775-35613142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:36013790-36014157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:36121808-36122174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 45
               

               Conread position:
               3-370
               

               Cow position:
               chr3:36417372-36417739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:36861474-36861111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr3:37150774-37150409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:37894466-37894823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr3:37972659-37973014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 131
               

               Conread position:
               3-370
               

               Cow position:
               chr3:38748013-38748381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:39232344-39232711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:39921315-39920949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr3:40051775-40052143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 135
               

               Conread position:
               3-370
               

               Cow position:
               chr3:40194503-40194870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:41018678-41018311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:41057592-41057959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 351
               

               Conread position:
               3-370
               

               Cow position:
               chr3:41206933-41206572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 58
               

               Conread position:
               3-370
               

               Cow position:
               chr3:41396000-41396367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:42277621-42277255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:42976682-42976316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr3:44927446-44927813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:45097872-45098239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:45748887-45749254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:45946893-45946526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:46261000-46261369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:46683466-46683832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:46856747-46856382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr3:47106550-47106919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr3:47719879-47720246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:48574285-48573910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 280
               

               Conread position:
               3-370
               

               Cow position:
               chr3:49286794-49287161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:49564649-49565016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 232
               

               Conread position:
               3-370
               

               Cow position:
               chr3:49604814-49604448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:49610583-49610216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:49975897-49975530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:50959846-50960213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr3:51520434-51520067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:51857483-51857850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:52011402-52011769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:52045387-52045020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr3:52149653-52149285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr3:53879633-53879266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:55837474-55837835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:56298017-56298378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr3:56484622-56484255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:58336939-58337299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr3:65085566-65085932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:65323357-65323003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:65474060-65474427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:66887560-66887193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:66968246-66967879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:68259354-68259720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 89
               

               Conread position:
               3-370
               

               Cow position:
               chr3:68717079-68716711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:68870122-68869756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:69345361-69344991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:74061100-74061467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:76865064-76865431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:77696866-77696504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 74
               

               Conread position:
               3-370
               

               Cow position:
               chr3:78472358-78471992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:80741503-80741870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:81057894-81057527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr3:81064057-81064423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-372
               

               Cow position:
               chr3:28669056-28668687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-372
               

               Cow position:
               chr3:43525107-43524738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-372
               

               Cow position:
               chr3:53934927-53935296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 46
               

               Conread position:
               3-373
               

               Cow position:
               chr3:2364627-2364257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-373
               

               Cow position:
               chr3:4135347-4134984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-373
               

               Cow position:
               chr3:5988930-5988566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 0
               

               Conread position:
               3-373
               

               Cow position:
               chr3:8240392-8240761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 0
               

               Conread position:
               3-373
               

               Cow position:
               chr3:18863070-18863440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-373
               

               Cow position:
               chr3:24265830-24266200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-373
               

               Cow position:
               chr3:24758846-24758487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-373
               

               Cow position:
               chr3:29282386-29282756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-373
               

               Cow position:
               chr3:38346669-38347035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 72
               

               Conread position:
               3-373
               

               Cow position:
               chr3:40520307-40519938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 133
               

               Conread position:
               3-373
               

               Cow position:
               chr3:59748189-59747819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-373
               

               Cow position:
               chr3:61200422-61200792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-373
               

               Cow position:
               chr3:64011354-64010984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               257
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               111, 45
               

               Conread position:
               3-373
               

               Cow position:
               chr3:66013846-66014240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               3-373
               

               Cow position:
               chr3:68696342-68695975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-374
               

               Cow position:
               chr3:6442699-6443070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-374
               

               Cow position:
               chr3:15387669-15388046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 301
               

               Conread position:
               3-374
               

               Cow position:
               chr3:28635262-28634894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 64
               

               Conread position:
               3-374
               

               Cow position:
               chr3:65325913-65325541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 35
               

               Conread position:
               3-381
               

               Cow position:
               chr3:302854-303231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-381
               

               Cow position:
               chr3:1622733-1623111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-381
               

               Cow position:
               chr3:3372554-3372175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 134
               

               Conread position:
               3-381
               

               Cow position:
               chr3:33268862-33268485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 308
               

               Conread position:
               3-386
               

               Cow position:
               chr3:26833150-26832791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               3-386
               

               Cow position:
               chr3:32356383-32356765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-386
               

               Cow position:
               chr3:32411934-32411551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-386
               

               Cow position:
               chr3:34016203-34016589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 136
               

               Conread position:
               3-386
               

               Cow position:
               chr3:79668743-79669126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-387
               

               Cow position:
               chr3:945598-945978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               264
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               39, 149
               

               Conread position:
               3-388
               

               Cow position:
               chr3:2537722-2538097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 34
               

               Conread position:
               3-388
               

               Cow position:
               chr3:3884562-3884176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 289
               

               Conread position:
               3-388
               

               Cow position:
               chr3:29887954-29887577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               3-388
               

               Cow position:
               chr3:51032809-51033191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 0
               

               Conread position:
               3-388
               

               Cow position:
               chr3:68302774-68303177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-391
               

               Cow position:
               chr3:18887042-18887433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 137
               

               Conread position:
               3-391
               

               Cow position:
               chr3:31224919-31225301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 175
               

               Conread position:
               3-395
               

               Cow position:
               chr3:48530104-48530489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 64
               

               Conread position:
               3-453
               

               Cow position:
               chr3:14717272-14717721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 295
               

               Conread position:
               3-456
               

               Cow position:
               chr3:2674501-2674942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 49
               

               Conread position:
               3-459
               

               Cow position:
               chr3:6689460-6689918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               286, 74
               

               Conread position:
               3-459
               

               Cow position:
               chr3:53903651-53904096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 66
               

               Conread position:
               3-459
               

               Cow position:
               chr3:55085725-55085260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 164
               

               Conread position:
               3-459
               

               Cow position:
               chr3:62827145-62826702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               390, 82
               

               Conread position:
               3-464
               

               Cow position:
               chr3:53384819-53384362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               409, 327
               

               Conread position:
               3-476
               

               Cow position:
               chr3:79592423-79591945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               390, 58
               

               Conread position:
               3-477
               

               Cow position:
               chr3:61278379-61278853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               370, 130
               

               Conread position:
               3-478
               

               Cow position:
               chr3:72390551-72391024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 26
               

               Conread position:
               3-479
               

               Cow position:
               chr3:69751236-69750762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 19
               

               Conread position:
               3-480
               

               Cow position:
               chr3:27544876-27544392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 164
               

               Conread position:
               3-480
               

               Cow position:
               chr3:28675453-28675931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               390, 347
               

               Conread position:
               3-480
               

               Cow position:
               chr3:58541075-58540586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               323
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               124, 104
               

               Conread position:
               3-480
               

               Cow position:
               chr3:73708519-73708988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 45
               

               Conread position:
               3-483
               

               Cow position:
               chr3:2507015-2506532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 271
               

               Conread position:
               3-483
               

               Cow position:
               chr3:3165028-3164551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 202
               

               Conread position:
               3-483
               

               Cow position:
               chr3:14552344-14552821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 182
               

               Conread position:
               3-483
               

               Cow position:
               chr3:23169605-23169121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 18
               

               Conread position:
               3-489
               

               Cow position:
               chr3:54959664-54960138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 32
               

               Conread position:
               3-490
               

               Cow position:
               chr3:66610376-66609892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 301
               

               Conread position:
               3-491
               

               Cow position:
               chr3:49649846-49650338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               344, 50
               

               Conread position:
               3-492
               

               Cow position:
               chr3:57554358-57553898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               332
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               278, 52
               

               Conread position:
               3-495
               

               Cow position:
               chr3:25690259-25690746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               390, 64
               

               Conread position:
               3-496
               

               Cow position:
               chr3:7566950-7566467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 196
               

               Conread position:
               3-496
               

               Cow position:
               chr3:30179547-30180039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 255
               

               Conread position:
               3-496
               

               Cow position:
               chr3:48241076-48241573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               508
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 159
               

               Conread position:
               3-496
               

               Cow position:
               chr3:48296167-48296666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               508
               

               Alignm identity:
               327
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               80, 39
               

               Conread position:
               3-496
               

               Cow position:
               chr3:54434451-54434932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 48
               

               Conread position:
               3-498
               

               Cow position:
               chr3:2024634-2025145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               517
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 140
               

               Conread position:
               3-525
               

               Cow position:
               chr3:48269324-48269845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               530
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 302
               

               Conread position:
               4-134
               

               Cow position:
               chr3:76136959-76137090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               4-191
               

               Cow position:
               chr3:22272059-22271869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               4-195
               

               Cow position:
               chr3:61856539-61856729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               175, 0
               

               Conread position:
               4-212
               

               Cow position:
               chr3:39970434-39970221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               73, 38
               

               Conread position:
               4-218
               

               Cow position:
               chr3:70321488-70321271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 0
               

               Conread position:
               4-219
               

               Cow position:
               chr3:23497117-23496899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               121, 44
               

               Conread position:
               4-222
               

               Cow position:
               chr3:8392714-8392935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               136, 63
               

               Conread position:
               4-223
               

               Cow position:
               chr3:601348-601569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               122, 80
               

               Conread position:
               4-226
               

               Cow position:
               chr3:15998956-15999187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               4-233
               

               Cow position:
               chr3:33469032-33468806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               72, 45
               

               Conread position:
               4-254
               

               Cow position:
               chr3:46333023-46332765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               124, 177
               

               Conread position:
               4-255
               

               Cow position:
               chr3:73467047-73467305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               4-257
               

               Cow position:
               chr3:14633615-14633356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               4-259
               

               Cow position:
               chr3:20093270-20093017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               4-262
               

               Cow position:
               chr3:8050601-8050854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               137, 46
               

               Conread position:
               4-264
               

               Cow position:
               chr3:524594-524853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 0
               

               Conread position:
               4-274
               

               Cow position:
               chr3:77187915-77188181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               4-284
               

               Cow position:
               chr3:17578007-17578274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               121, 49
               

               Conread position:
               4-287
               

               Cow position:
               chr3:54485120-54485399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               126, 175
               

               Conread position:
               4-288
               

               Cow position:
               chr3:22044277-22044000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               174, 73
               

               Conread position:
               4-288
               

               Cow position:
               chr3:23735637-23735353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 206
               

               Conread position:
               4-288
               

               Cow position:
               chr3:24191810-24191520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               122, 143
               

               Conread position:
               4-288
               

               Cow position:
               chr3:52514085-52514373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               83, 27
               

               Conread position:
               4-288
               

               Cow position:
               chr3:70353944-70353663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               127, 47
               

               Conread position:
               4-321
               

               Cow position:
               chr3:12254946-12255262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               12, 45
               

               Conread position:
               4-322
               

               Cow position:
               chr3:66978298-66978626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 305
               

               Conread position:
               4-324
               

               Cow position:
               chr3:18460055-18459735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 298
               

               Conread position:
               4-324
               

               Cow position:
               chr3:58971368-58971672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               123, 62
               

               Conread position:
               4-339
               

               Cow position:
               chr3:57835013-57834669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               123, 297
               

               Conread position:
               4-340
               

               Cow position:
               chr3:42603287-42603631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               124, 237
               

               Conread position:
               4-342
               

               Cow position:
               chr3:16115031-16115370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 225
               

               Conread position:
               4-342
               

               Cow position:
               chr3:72614918-72615261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               70, 141
               

               Conread position:
               4-346
               

               Cow position:
               chr3:47518931-47519273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               118, 63
               

               Conread position:
               4-346
               

               Cow position:
               chr3:64537084-64536737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 299
               

               Conread position:
               4-346
               

               Cow position:
               chr3:72131836-72131490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               242
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               122, 48
               

               Conread position:
               4-348
               

               Cow position:
               chr3:54909025-54909373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               27, 219
               

               Conread position:
               4-349
               

               Cow position:
               chr3:2007736-2008079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 272
               

               Conread position:
               4-349
               

               Cow position:
               chr3:8900877-8901229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 304
               

               Conread position:
               4-356
               

               Cow position:
               chr3:77271812-77271450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 188
               

               Conread position:
               4-370
               

               Cow position:
               chr3:27453930-27453571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 90
               

               Conread position:
               4-370
               

               Cow position:
               chr3:47233765-47233400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 73
               

               Conread position:
               4-372
               

               Cow position:
               chr3:470978-470593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               271
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               121, 183
               

               Conread position:
               4-372
               

               Cow position:
               chr3:5420410-5420033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 216
               

               Conread position:
               4-384
               

               Cow position:
               chr3:77496283-77496662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 33
               

               Conread position:
               4-483
               

               Cow position:
               chr3:9843039-9843530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 301
               

               Conread position:
               4-491
               

               Cow position:
               chr3:67929809-67929311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 54
               

               Conread position:
               4-496
               

               Cow position:
               chr3:14466238-14465757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               454, 63
               

               Conread position:
               5-123
               

               Cow position:
               chr3:48603891-48604008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               5-129
               

               Cow position:
               chr3:12712748-12712624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-153
               

               Cow position:
               chr3:3651840-3651692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-155
               

               Cow position:
               chr3:67544755-67544610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               5-177
               

               Cow position:
               chr3:51046588-51046414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               86, 92
               

               Conread position:
               5-181
               

               Cow position:
               chr3:57481123-57480947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-186
               

               Cow position:
               chr3:4040020-4040200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               169, 37
               

               Conread position:
               5-188
               

               Cow position:
               chr3:22481823-22481641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               136, 27
               

               Conread position:
               5-189
               

               Cow position:
               chr3:19753101-19752917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-189
               

               Cow position:
               chr3:29311780-29311964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-191
               

               Cow position:
               chr3:13117548-13117365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               5-192
               

               Cow position:
               chr3:12323300-12323485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               172, 0
               

               Conread position:
               5-200
               

               Cow position:
               chr3:77448573-77448778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               118, 72
               

               Conread position:
               5-201
               

               Cow position:
               chr3:7476265-7476069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               155
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-201
               

               Cow position:
               chr3:49541574-49541375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               5-228
               

               Cow position:
               chr3:56718502-56718261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               5-233
               

               Cow position:
               chr3:42595333-42595101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               119, 30
               

               Conread position:
               5-233
               

               Cow position:
               chr3:42846978-42847206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-243
               

               Cow position:
               chr3:72018308-72018553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               5-246
               

               Cow position:
               chr3:47691594-47691834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               123, 71
               

               Conread position:
               5-247
               

               Cow position:
               chr3:78261079-78260837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-248
               

               Cow position:
               chr3:10443007-10443248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               5-248
               

               Cow position:
               chr3:67624812-67624570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               5-249
               

               Cow position:
               chr3:40005502-40005747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               5-249
               

               Cow position:
               chr3:48600170-48600396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               5-253
               

               Cow position:
               chr3:74404172-74404419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               135, 47
               

               Conread position:
               5-255
               

               Cow position:
               chr3:35077195-35076940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               5-259
               

               Cow position:
               chr3:16886448-16886195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               123, 86
               

               Conread position:
               5-261
               

               Cow position:
               chr3:69779691-69779439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               5-265
               

               Cow position:
               chr3:5887511-5887771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               190
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               50, 39
               

               Conread position:
               5-267
               

               Cow position:
               chr3:74407820-74408078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 77
               

               Conread position:
               5-269
               

               Cow position:
               chr3:56644696-56644432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-269
               

               Cow position:
               chr3:68583818-68583561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 28
               

               Conread position:
               5-269
               

               Cow position:
               chr3:72633707-72633969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               5-269
               

               Cow position:
               chr3:75106917-75107173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               5-270
               

               Cow position:
               chr3:495817-495553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               5-271
               

               Cow position:
               chr3:67165398-67165672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               58, 240
               

               Conread position:
               5-272
               

               Cow position:
               chr3:83928357-83928624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 184
               

               Conread position:
               5-274
               

               Cow position:
               chr3:226258-225993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 43
               

               Conread position:
               5-274
               

               Cow position:
               chr3:44535294-44535024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 0
               

               Conread position:
               5-277
               

               Cow position:
               chr3:24572437-24572164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               5-279
               

               Cow position:
               chr3:3845376-3845096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               120, 168
               

               Conread position:
               5-284
               

               Cow position:
               chr3:24308613-24308897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               112, 223
               

               Conread position:
               5-284
               

               Cow position:
               chr3:62321675-62321390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 62
               

               Conread position:
               5-285
               

               Cow position:
               chr3:12872739-12873011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 27
               

               Conread position:
               5-286
               

               Cow position:
               chr3:20519702-20519992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               5-287
               

               Cow position:
               chr3:75997262-75996970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               5-288
               

               Cow position:
               chr3:2035765-2036047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               5-288
               

               Cow position:
               chr3:2118087-2118388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               5-288
               

               Cow position:
               chr3:3836973-3836686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 51
               

               Conread position:
               5-288
               

               Cow position:
               chr3:6078869-6078586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-288
               

               Cow position:
               chr3:10244294-10244577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-288
               

               Cow position:
               chr3:22234857-22234567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               219
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               167, 105
               

               Conread position:
               5-288
               

               Cow position:
               chr3:36874427-36874144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-288
               

               Cow position:
               chr3:37009111-37008840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               5-288
               

               Cow position:
               chr3:42187103-42187401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               5-288
               

               Cow position:
               chr3:43483420-43483705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               52, 61
               

               Conread position:
               5-288
               

               Cow position:
               chr3:64216206-64216488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               5-288
               

               Cow position:
               chr3:68042979-68042696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-288
               

               Cow position:
               chr3:68878257-68877961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 98
               

               Conread position:
               5-289
               

               Cow position:
               chr3:49134073-49133789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-291
               

               Cow position:
               chr3:4991281-4990986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               5-291
               

               Cow position:
               chr3:31422491-31422194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               5-291
               

               Cow position:
               chr3:65179008-65179294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-291
               

               Cow position:
               chr3:73450678-73450391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 62
               

               Conread position:
               5-294
               

               Cow position:
               chr3:2431397-2431087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               5-296
               

               Cow position:
               chr3:68705167-68704862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 102
               

               Conread position:
               5-298
               

               Cow position:
               chr3:63705173-63705455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               120, 43
               

               Conread position:
               5-324
               

               Cow position:
               chr3:7857815-7858137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 176
               

               Conread position:
               5-324
               

               Cow position:
               chr3:13513268-13512952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 240
               

               Conread position:
               5-324
               

               Cow position:
               chr3:25169767-25170090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               120, 62
               

               Conread position:
               5-324
               

               Cow position:
               chr3:45026312-45025994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 0
               

               Conread position:
               5-328
               

               Cow position:
               chr3:2384255-2383924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 244
               

               Conread position:
               5-335
               

               Cow position:
               chr3:19942517-19942845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 131
               

               Conread position:
               5-335
               

               Cow position:
               chr3:43189632-43189300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 0
               

               Conread position:
               5-340
               

               Cow position:
               chr3:60701630-60701289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 242
               

               Conread position:
               5-342
               

               Cow position:
               chr3:70415594-70415247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               5-344
               

               Cow position:
               chr3:32221343-32221689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               74, 161
               

               Conread position:
               5-345
               

               Cow position:
               chr3:38255263-38255611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               10, 88
               

               Conread position:
               5-346
               

               Cow position:
               chr3:31992060-31991714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               17, 63
               

               Conread position:
               5-346
               

               Cow position:
               chr3:42670790-42671127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 229
               

               Conread position:
               5-346
               

               Cow position:
               chr3:58104891-58105244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               55, 48
               

               Conread position:
               5-346
               

               Cow position:
               chr3:78546634-78546290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               119, 62
               

               Conread position:
               5-346
               

               Cow position:
               chr3:83437636-83437295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-348
               

               Cow position:
               chr3:11385141-11385482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               5-348
               

               Cow position:
               chr3:17865063-17865402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               5-348
               

               Cow position:
               chr3:18815128-18815466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               5-348
               

               Cow position:
               chr3:27223659-27223996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               130, 43
               

               Conread position:
               5-348
               

               Cow position:
               chr3:34026936-34026589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 81
               

               Conread position:
               5-348
               

               Cow position:
               chr3:38096535-38096878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-348
               

               Cow position:
               chr3:45215168-45214827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 0
               

               Conread position:
               5-348
               

               Cow position:
               chr3:46753475-46753823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 331
               

               Conread position:
               5-348
               

               Cow position:
               chr3:56976520-56976182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               5-348
               

               Cow position:
               chr3:78023813-78023470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-348
               

               Cow position:
               chr3:81374617-81374275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 0
               

               Conread position:
               5-349
               

               Cow position:
               chr3:597755-598099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 294
               

               Conread position:
               5-349
               

               Cow position:
               chr3:13517689-13517346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               237
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               122, 66
               

               Conread position:
               5-349
               

               Cow position:
               chr3:58383428-58383778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 303
               

               Conread position:
               5-349
               

               Cow position:
               chr3:59691378-59691714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 62
               

               Conread position:
               5-356
               

               Cow position:
               chr3:18245949-18245603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 97
               

               Conread position:
               5-359
               

               Cow position:
               chr3:77472366-77472012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-367
               

               Cow position:
               chr3:76000329-75999962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 39
               

               Conread position:
               5-370
               

               Cow position:
               chr3:4634788-4635170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               260
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               170, 311
               

               Conread position:
               5-370
               

               Cow position:
               chr3:51869694-51870059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 131
               

               Conread position:
               5-370
               

               Cow position:
               chr3:56125198-56125578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               119, 258
               

               Conread position:
               5-370
               

               Cow position:
               chr3:70730934-70731299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 294
               

               Conread position:
               5-373
               

               Cow position:
               chr3:11784985-11785353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-373
               

               Cow position:
               chr3:21070778-21070408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               5-373
               

               Cow position:
               chr3:29391482-29391116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 217
               

               Conread position:
               5-373
               

               Cow position:
               chr3:40568558-40568193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 137
               

               Conread position:
               5-373
               

               Cow position:
               chr3:66623820-66624189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 0
               

               Conread position:
               5-374
               

               Cow position:
               chr3:32326315-32325946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-374
               

               Cow position:
               chr3:40284714-40284345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-374
               

               Cow position:
               chr3:64294144-64294512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 166
               

               Conread position:
               5-378
               

               Cow position:
               chr3:14864514-14864878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 16
               

               Conread position:
               5-379
               

               Cow position:
               chr3:27243049-27242683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 0
               

               Conread position:
               5-381
               

               Cow position:
               chr3:2707240-2706884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               5-381
               

               Cow position:
               chr3:23010986-23011356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 131
               

               Conread position:
               5-381
               

               Cow position:
               chr3:24433011-24433387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 294
               

               Conread position:
               5-381
               

               Cow position:
               chr3:24442472-24442098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 294
               

               Conread position:
               5-381
               

               Cow position:
               chr3:33124624-33124251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               5-381
               

               Cow position:
               chr3:40827320-40827696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 40
               

               Conread position:
               5-381
               

               Cow position:
               chr3:46506406-46506781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 42
               

               Conread position:
               5-381
               

               Cow position:
               chr3:49416217-49415841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 294
               

               Conread position:
               5-381
               

               Cow position:
               chr3:56336046-56335671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 23
               

               Conread position:
               5-381
               

               Cow position:
               chr3:65989541-65989916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 33
               

               Conread position:
               5-381
               

               Cow position:
               chr3:66829316-66828939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 289
               

               Conread position:
               5-381
               

               Cow position:
               chr3:78110579-78110952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 0
               

               Conread position:
               5-384
               

               Cow position:
               chr3:1498343-1498715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               246
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               131, 71
               

               Conread position:
               5-384
               

               Cow position:
               chr3:48811520-48811142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 276
               

               Conread position:
               5-386
               

               Cow position:
               chr3:75038207-75037826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-388
               

               Cow position:
               chr3:17937383-17936990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 66
               

               Conread position:
               5-388
               

               Cow position:
               chr3:24531306-24531676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               120, 60
               

               Conread position:
               5-388
               

               Cow position:
               chr3:44254966-44254581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               134, 23
               

               Conread position:
               5-388
               

               Cow position:
               chr3:55461035-55460651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               264
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               117, 207
               

               Conread position:
               5-391
               

               Cow position:
               chr3:24887217-24887604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 104
               

               Conread position:
               5-391
               

               Cow position:
               chr3:72530644-72531034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 152
               

               Conread position:
               5-459
               

               Cow position:
               chr3:21100437-21100890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               378, 230
               

               Conread position:
               5-459
               

               Cow position:
               chr3:26974001-26973543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               380, 0
               

               Conread position:
               5-459
               

               Cow position:
               chr3:35884487-35884036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 118
               

               Conread position:
               5-459
               

               Cow position:
               chr3:69930202-69929748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 111
               

               Conread position:
               5-467
               

               Cow position:
               chr3:21178622-21178156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               378, 353
               

               Conread position:
               5-467
               

               Cow position:
               chr3:53519414-53519873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 131
               

               Conread position:
               5-467
               

               Cow position:
               chr3:59603435-59603896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 76
               

               Conread position:
               5-476
               

               Cow position:
               chr3:54653525-54653050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               391, 471
               

               Conread position:
               5-477
               

               Cow position:
               chr3:31419161-31419640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 358
               

               Conread position:
               5-479
               

               Cow position:
               chr3:50768141-50768623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 279
               

               Conread position:
               5-480
               

               Cow position:
               chr3:35853010-35852534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 296
               

               Conread position:
               5-483
               

               Cow position:
               chr3:15052461-15052008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 118
               

               Conread position:
               5-483
               

               Cow position:
               chr3:79208519-79208054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 25
               

               Conread position:
               5-491
               

               Cow position:
               chr3:65413825-65413328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               329
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               135, 303
               

               Conread position:
               5-496
               

               Cow position:
               chr3:36570574-36570091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 62
               

               Conread position:
               5-504
               

               Cow position:
               chr3:11410640-11410133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               512
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 224
               

               Conread position:
               6-123
               

               Cow position:
               chr3:19822774-19822657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-147
               

               Cow position:
               chr3:15153286-15153427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-188
               

               Cow position:
               chr3:54608377-54608195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-205
               

               Cow position:
               chr3:45863304-45863106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               181, 143
               

               Conread position:
               6-213
               

               Cow position:
               chr3:47630102-47629896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               6-223
               

               Cow position:
               chr3:4554890-4554666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               6-231
               

               Cow position:
               chr3:13495212-13495443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               118, 86
               

               Conread position:
               6-233
               

               Cow position:
               chr3:62157521-62157750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               120, 24
               

               Conread position:
               6-241
               

               Cow position:
               chr3:64683189-64682961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               119, 61
               

               Conread position:
               6-245
               

               Cow position:
               chr3:60932899-60933138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-248
               

               Cow position:
               chr3:45647123-45647364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               6-248
               

               Cow position:
               chr3:72006386-72006141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 183
               

               Conread position:
               6-248
               

               Cow position:
               chr3:74391273-74391031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 133
               

               Conread position:
               6-253
               

               Cow position:
               chr3:31120192-31119947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               6-254
               

               Cow position:
               chr3:7562492-7562247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               151, 43
               

               Conread position:
               6-255
               

               Cow position:
               chr3:49429017-49428763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               115, 57
               

               Conread position:
               6-256
               

               Cow position:
               chr3:26532350-26532100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               128, 42
               

               Conread position:
               6-268
               

               Cow position:
               chr3:72668716-72668454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-269
               

               Cow position:
               chr3:25011767-25012030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-270
               

               Cow position:
               chr3:10039044-10039310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               107, 34
               

               Conread position:
               6-274
               

               Cow position:
               chr3:63703681-63703935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               117, 32
               

               Conread position:
               6-284
               

               Cow position:
               chr3:26894138-26894413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 0
               

               Conread position:
               6-284
               

               Cow position:
               chr3:31287935-31287648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               134, 58
               

               Conread position:
               6-288
               

               Cow position:
               chr3:3953962-3954244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 75
               

               Conread position:
               6-288
               

               Cow position:
               chr3:22724150-22723872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               6-288
               

               Cow position:
               chr3:22948028-22947748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               148, 112
               

               Conread position:
               6-288
               

               Cow position:
               chr3:55010698-55010406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 118
               

               Conread position:
               6-288
               

               Cow position:
               chr3:73763001-73762709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 0
               

               Conread position:
               6-289
               

               Cow position:
               chr3:37948839-37948553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               122, 270
               

               Conread position:
               6-291
               

               Cow position:
               chr3:49674264-49674546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 160
               

               Conread position:
               6-302
               

               Cow position:
               chr3:84419316-84419019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               6-320
               

               Cow position:
               chr3:82932257-82932567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               128, 71
               

               Conread position:
               6-321
               

               Cow position:
               chr3:66649988-66649660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               81, 61
               

               Conread position:
               6-322
               

               Cow position:
               chr3:46013481-46013172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               128, 68
               

               Conread position:
               6-335
               

               Cow position:
               chr3:40344859-40345197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               6-344
               

               Cow position:
               chr3:24763835-24763503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               307, 46
               

               Conread position:
               6-345
               

               Cow position:
               chr3:23177457-23177795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               119, 46
               

               Conread position:
               6-346
               

               Cow position:
               chr3:62233783-62233456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               162, 27
               

               Conread position:
               6-348
               

               Cow position:
               chr3:11447472-11447806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 123
               

               Conread position:
               6-348
               

               Cow position:
               chr3:59118143-59117796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               6-349
               

               Cow position:
               chr3:62785109-62784770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               236
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               122, 16
               

               Conread position:
               6-357
               

               Cow position:
               chr3:51068319-51067973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               137, 250
               

               Conread position:
               6-378
               

               Cow position:
               chr3:18670656-18671030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 0
               

               Conread position:
               6-381
               

               Cow position:
               chr3:53407784-53407411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               6-388
               

               Cow position:
               chr3:24639044-24639436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 312
               

               Conread position:
               6-388
               

               Cow position:
               chr3:67044632-67044252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 250
               

               Conread position:
               6-450
               

               Cow position:
               chr3:14724765-14725210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 201
               

               Conread position:
               6-467
               

               Cow position:
               chr3:11333843-11333385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 123
               

               Conread position:
               6-467
               

               Cow position:
               chr3:23204037-23203574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               390, 292
               

               Conread position:
               6-519
               

               Cow position:
               chr3:80564424-80564940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               533
               

               Alignm identity:
               345
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               119, 61
               

               Conread position:
               7-140
               

               Cow position:
               chr3:80202315-80202181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               7-151
               

               Cow position:
               chr3:74532362-74532506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               123, 119
               

               Conread position:
               7-188
               

               Cow position:
               chr3:69945507-69945327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               7-201
               

               Cow position:
               chr3:67021749-67021943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-208
               

               Cow position:
               chr3:70289156-70288958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               7-213
               

               Cow position:
               chr3:11736751-11736547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               60, 76
               

               Conread position:
               7-217
               

               Cow position:
               chr3:16739300-16739514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               118, 137
               

               Conread position:
               7-232
               

               Cow position:
               chr3:63147694-63147466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               7-248
               

               Cow position:
               chr3:3984761-3984990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               7-249
               

               Cow position:
               chr3:46081950-46082191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               140, 65
               

               Conread position:
               7-254
               

               Cow position:
               chr3:77004958-77005194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               7-255
               

               Cow position:
               chr3:83202021-83201778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               7-262
               

               Cow position:
               chr3:26659873-26659616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               121, 58
               

               Conread position:
               7-267
               

               Cow position:
               chr3:4088208-4087953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               7-284
               

               Cow position:
               chr3:83761701-83761408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               7-288
               

               Cow position:
               chr3:26920364-26920646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 60
               

               Conread position:
               7-322
               

               Cow position:
               chr3:16157153-16157463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 228
               

               Conread position:
               7-324
               

               Cow position:
               chr3:47272242-47271927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               7-328
               

               Cow position:
               chr3:3890208-3889878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               228
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               7-346
               

               Cow position:
               chr3:2901658-2901321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 117
               

               Conread position:
               7-348
               

               Cow position:
               chr3:7280294-7280635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 131
               

               Conread position:
               7-348
               

               Cow position:
               chr3:42507577-42507234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 131
               

               Conread position:
               7-356
               

               Cow position:
               chr3:54808627-54808976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 286
               

               Conread position:
               7-367
               

               Cow position:
               chr3:26219592-26219234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               7-370
               

               Cow position:
               chr3:15655683-15655321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               251
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               111, 52
               

               Conread position:
               7-370
               

               Cow position:
               chr3:60054447-60054809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 60
               

               Conread position:
               7-378
               

               Cow position:
               chr3:11789599-11789975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 221
               

               Conread position:
               7-388
               

               Cow position:
               chr3:40231397-40231778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 148
               

               Conread position:
               7-388
               

               Cow position:
               chr3:42489850-42489462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               268
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               127, 58
               

               Conread position:
               7-389
               

               Cow position:
               chr3:4691463-4691853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 44
               

               Conread position:
               7-391
               

               Cow position:
               chr3:34603443-34603835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               262
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               102, 278
               

               Conread position:
               7-468
               

               Cow position:
               chr3:364740-364283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               302, 190
               

               Conread position:
               8-158
               

               Cow position:
               chr3:51234867-51234716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               8-165
               

               Cow position:
               chr3:44256647-44256490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-173
               

               Cow position:
               chr3:63737596-63737764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               8-194
               

               Cow position:
               chr3:58254367-58254555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               35, 90
               

               Conread position:
               8-205
               

               Cow position:
               chr3:2044845-2044644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               121, 59
               

               Conread position:
               8-225
               

               Cow position:
               chr3:31524349-31524568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               8-225
               

               Cow position:
               chr3:49160746-49160532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               130, 91
               

               Conread position:
               8-243
               

               Cow position:
               chr3:61262290-61262525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-244
               

               Cow position:
               chr3:33503576-33503338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               118, 40
               

               Conread position:
               8-246
               

               Cow position:
               chr3:19126941-19127185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               54, 90
               

               Conread position:
               8-249
               

               Cow position:
               chr3:64278918-64279158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               114, 6
               

               Conread position:
               8-281
               

               Cow position:
               chr3:6962612-6962890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               64, 29
               

               Conread position:
               8-284
               

               Cow position:
               chr3:79094596-79094325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               8-287
               

               Cow position:
               chr3:69496298-69496020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 20
               

               Conread position:
               8-290
               

               Cow position:
               chr3:41655161-41655449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               117, 166
               

               Conread position:
               8-299
               

               Cow position:
               chr3:62515752-62516048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               111, 79
               

               Conread position:
               8-321
               

               Cow position:
               chr3:10055806-10056119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               104, 133
               

               Conread position:
               8-325
               

               Cow position:
               chr3:43045531-43045845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               120, 149
               

               Conread position:
               8-325
               

               Cow position:
               chr3:56576185-56575864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               121, 41
               

               Conread position:
               8-344
               

               Cow position:
               chr3:15685430-15685112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               8-345
               

               Cow position:
               chr3:68682531-68682186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               115, 41
               

               Conread position:
               8-346
               

               Cow position:
               chr3:6799542-6799193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               247
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               114, 221
               

               Conread position:
               8-346
               

               Cow position:
               chr3:54951572-54951920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               112, 26
               

               Conread position:
               8-346
               

               Cow position:
               chr3:58953761-58954105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 160
               

               Conread position:
               8-347
               

               Cow position:
               chr3:81101974-81102308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               8-456
               

               Cow position:
               chr3:14453290-14453743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 296
               

               Conread position:
               8-459
               

               Cow position:
               chr3:18393919-18393471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 178
               

               Conread position:
               9-274
               

               Cow position:
               chr3:32772691-32772971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               204
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               9-348
               

               Cow position:
               chr3:30700789-30701133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               234, 127
               

               Conread position:
               9-348
               

               Cow position:
               chr3:77276931-77276596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 12
               

               Conread position:
               9-349
               

               Cow position:
               chr3:59798730-59799064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 30
               

               Conread position:
               9-369
               

               Cow position:
               chr3:51242664-51242304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 127
               

               Conread position:
               9-388
               

               Cow position:
               chr3:51490928-51491311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               252
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               134, 322
               

               Conread position:
               10-153
               

               Cow position:
               chr3:68586481-68586624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-194
               

               Cow position:
               chr3:80067221-80067031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 68
               

               Conread position:
               10-210
               

               Cow position:
               chr3:56400207-56400414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               10-215
               

               Cow position:
               chr3:31504554-31504347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               10-219
               

               Cow position:
               chr3:20227843-20228057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               120, 20
               

               Conread position:
               10-244
               

               Cow position:
               chr3:24276192-24276430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               50, 58
               

               Conread position:
               10-254
               

               Cow position:
               chr3:16890186-16890429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               114, 78
               

               Conread position:
               10-269
               

               Cow position:
               chr3:5445188-5444930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               10-279
               

               Cow position:
               chr3:43426237-43426506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               115, 133
               

               Conread position:
               10-290
               

               Cow position:
               chr3:15191824-15192100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 0
               

               Conread position:
               10-324
               

               Cow position:
               chr3:77296083-77296396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               47, 72
               

               Conread position:
               10-330
               

               Cow position:
               chr3:17709810-17710128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 226
               

               Conread position:
               10-346
               

               Cow position:
               chr3:2627787-2628125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 152
               

               Conread position:
               10-346
               

               Cow position:
               chr3:15557424-15557775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               244
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               63, 298
               

               Conread position:
               10-346
               

               Cow position:
               chr3:19109201-19109543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               247
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               45, 23
               

               Conread position:
               10-370
               

               Cow position:
               chr3:3618440-3618800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 126
               

               Conread position:
               10-378
               

               Cow position:
               chr3:50762593-50762963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               10-391
               

               Cow position:
               chr3:69207649-69207274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               99, 162
               

               Conread position:
               10-483
               

               Cow position:
               chr3:77226799-77227266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               318
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               118, 42
               

               Conread position:
               11-224
               

               Cow position:
               chr3:28639144-28638929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               116, 66
               

               Conread position:
               11-259
               

               Cow position:
               chr3:56101881-56102132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               123, 41
               

               Conread position:
               11-262
               

               Cow position:
               chr3:83920811-83920555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               104, 193
               

               Conread position:
               11-268
               

               Cow position:
               chr3:15157417-15157668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               118, 95
               

               Conread position:
               11-272
               

               Cow position:
               chr3:45978140-45978401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-288
               

               Cow position:
               chr3:48620775-48621063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               33, 43
               

               Conread position:
               11-346
               

               Cow position:
               chr3:11532434-11532781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               56, 237
               

               Conread position:
               11-346
               

               Cow position:
               chr3:48362560-48362888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               11-348
               

               Cow position:
               chr3:1760131-1760468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 125
               

               Conread position:
               11-348
               

               Cow position:
               chr3:20998208-20997871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-348
               

               Cow position:
               chr3:22908352-22908025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 125
               

               Conread position:
               11-348
               

               Cow position:
               chr3:48567192-48566858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 105
               

               Conread position:
               11-348
               

               Cow position:
               chr3:64376079-64375744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 262
               

               Conread position:
               11-368
               

               Cow position:
               chr3:50217629-50217986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 125
               

               Conread position:
               11-374
               

               Cow position:
               chr3:15530274-15530632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 0
               

               Conread position:
               11-374
               

               Cow position:
               chr3:18917571-18917935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 285
               

               Conread position:
               11-389
               

               Cow position:
               chr3:2334757-2335132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 0
               

               Conread position:
               11-483
               

               Cow position:
               chr3:14626683-14626214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 56
               

               Conread position:
               11-492
               

               Cow position:
               chr3:33698194-33698680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               12-202
               

               Cow position:
               chr3:80477182-80476984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               12-217
               

               Cow position:
               chr3:52651314-52651113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               12-284
               

               Cow position:
               chr3:31383343-31383084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               12-287
               

               Cow position:
               chr3:83056033-83055763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               117, 23
               

               Conread position:
               12-346
               

               Cow position:
               chr3:4080386-4080063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               119, 55
               

               Conread position:
               13-225
               

               Cow position:
               chr3:25076643-25076869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               123, 97
               

               Conread position:
               13-280
               

               Cow position:
               chr3:45608489-45608756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               123, 54
               

               Conread position:
               13-287
               

               Cow position:
               chr3:25264942-25264669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               112, 65
               

               Conread position:
               13-290
               

               Cow position:
               chr3:68502492-68502218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               112, 73
               

               Conread position:
               13-290
               

               Cow position:
               chr3:68504041-68503767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               112, 73
               

               Conread position:
               13-318
               

               Cow position:
               chr3:8557307-8557002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-346
               

               Cow position:
               chr3:16716204-16715867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               115, 17
               

               Conread position:
               13-370
               

               Cow position:
               chr3:35919202-35919559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 123
               

               Conread position:
               13-370
               

               Cow position:
               chr3:54573296-54572939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 80
               

               Conread position:
               13-373
               

               Cow position:
               chr3:64654277-64654637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 123
               

               Conread position:
               13-476
               

               Cow position:
               chr3:49218834-49218377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 281
               

               Conread position:
               14-228
               

               Cow position:
               chr3:58934013-58934232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               114, 95
               

               Conread position:
               14-286
               

               Cow position:
               chr3:22919163-22919436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               14-288
               

               Cow position:
               chr3:21685421-21685694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               43, 17
               

               Conread position:
               14-288
               

               Cow position:
               chr3:52203371-52203653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               108, 244
               

               Conread position:
               14-292
               

               Cow position:
               chr3:12376563-12376845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               112, 34
               

               Conread position:
               14-294
               

               Cow position:
               chr3:18083026-18082742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               115, 272
               

               Conread position:
               14-324
               

               Cow position:
               chr3:23278069-23277757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 223
               

               Conread position:
               14-346
               

               Cow position:
               chr3:65203983-65203645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               72, 38
               

               Conread position:
               14-370
               

               Cow position:
               chr3:40049529-40049885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 116
               

               Conread position:
               14-373
               

               Cow position:
               chr3:73001386-73001739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               15-202
               

               Cow position:
               chr3:26993743-26993931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               65, 130
               

               Conread position:
               15-346
               

               Cow position:
               chr3:42876980-42876650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               124, 17
               

               Conread position:
               16-212
               

               Cow position:
               chr3:39840078-39840275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               116, 36
               

               Conread position:
               16-218
               

               Cow position:
               chr3:23887270-23887477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               109, 159
               

               Conread position:
               16-248
               

               Cow position:
               chr3:29360683-29360454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               67, 60
               

               Conread position:
               16-280
               

               Cow position:
               chr3:39398259-39397995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               130, 120
               

               Conread position:
               16-288
               

               Cow position:
               chr3:54119501-54119225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               110, 205
               

               Conread position:
               16-288
               

               Cow position:
               chr3:60278948-60278672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               77, 19
               

               Conread position:
               16-305
               

               Cow position:
               chr3:27580134-27579841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               112, 72
               

               Conread position:
               16-348
               

               Cow position:
               chr3:58027040-58026707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 121
               

               Conread position:
               16-349
               

               Cow position:
               chr3:15058126-15057788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 57
               

               Conread position:
               16-355
               

               Cow position:
               chr3:63688285-63687947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 276
               

               Conread position:
               17-182
               

               Cow position:
               chr3:43895211-43895044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               11, 121
               

               Conread position:
               17-225
               

               Cow position:
               chr3:69099064-69098856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 63
               

               Conread position:
               17-253
               

               Cow position:
               chr3:2680018-2680253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 0
               

               Conread position:
               17-256
               

               Cow position:
               chr3:8755480-8755234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               27, 18
               

               Conread position:
               17-282
               

               Cow position:
               chr3:1264113-1264381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               109, 11
               

               Conread position:
               17-285
               

               Cow position:
               chr3:69448223-69447951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               111, 235
               

               Conread position:
               17-288
               

               Cow position:
               chr3:73930921-73930655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               17-325
               

               Cow position:
               chr3:11961726-11962028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 220
               

               Conread position:
               17-342
               

               Cow position:
               chr3:23921165-23920844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               111, 276
               

               Conread position:
               17-346
               

               Cow position:
               chr3:32166108-32166447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               40, 48
               

               Conread position:
               17-346
               

               Cow position:
               chr3:36170321-36169983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               122, 212
               

               Conread position:
               17-346
               

               Cow position:
               chr3:78241814-78242147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               111, 127
               

               Conread position:
               17-348
               

               Cow position:
               chr3:62624156-62623827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 66
               

               Conread position:
               17-373
               

               Cow position:
               chr3:82617862-82618221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 290
               

               Conread position:
               18-266
               

               Cow position:
               chr3:50124021-50123779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               19-255
               

               Cow position:
               chr3:74561922-74561680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               19-348
               

               Cow position:
               chr3:35299152-35299483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 142
               

               Conread position:
               20-168
               

               Cow position:
               chr3:53149419-53149568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               20-233
               

               Cow position:
               chr3:68628219-68628007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               20-254
               

               Cow position:
               chr3:33254243-33254011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               20-259
               

               Cow position:
               chr3:54862961-54862730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               20-284
               

               Cow position:
               chr3:61225259-61224990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               149, 217
               

               Conread position:
               20-290
               

               Cow position:
               chr3:34270416-34270682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               20-344
               

               Cow position:
               chr3:26615801-26615481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               105, 201
               

               Conread position:
               20-346
               

               Cow position:
               chr3:40737937-40737604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               102, 144
               

               Conread position:
               20-355
               

               Cow position:
               chr3:24909639-24909976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               235
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               108, 222
               

               Conread position:
               20-370
               

               Cow position:
               chr3:40205553-40205203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 116
               

               Conread position:
               20-370
               

               Cow position:
               chr3:50941363-50941013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 116
               

               Conread position:
               20-452
               

               Cow position:
               chr3:70566257-70565828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 279
               

               Conread position:
               21-259
               

               Cow position:
               chr3:83485584-83485822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               74, 121
               

               Conread position:
               21-269
               

               Cow position:
               chr3:66903896-66903649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               211, 0
               

               Conread position:
               21-289
               

               Cow position:
               chr3:78204603-78204868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               103, 74
               

               Conread position:
               21-289
               

               Cow position:
               chr3:78207796-78207531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               103, 74
               

               Conread position:
               21-348
               

               Cow position:
               chr3:8053305-8052959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               236
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               58, 144
               

               Conread position:
               22-233
               

               Cow position:
               chr3:6882781-6882996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               123, 9
               

               Conread position:
               22-283
               

               Cow position:
               chr3:14456419-14456160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               22-288
               

               Cow position:
               chr3:61839787-61840038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               200
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               22-299
               

               Cow position:
               chr3:10854380-10854105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               117, 44
               

               Conread position:
               22-345
               

               Cow position:
               chr3:57590983-57591281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               22-459
               

               Cow position:
               chr3:53537998-53538438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               294
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               111, 15
               

               Conread position:
               23-215
               

               Cow position:
               chr3:82703094-82703285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               43, 114
               

               Conread position:
               23-269
               

               Cow position:
               chr3:69127302-69127062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               23-288
               

               Cow position:
               chr3:14446291-14446535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               23-346
               

               Cow position:
               chr3:8752942-8753272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               230
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               110, 9
               

               Conread position:
               23-347
               

               Cow position:
               chr3:27289408-27289745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 83
               

               Conread position:
               23-348
               

               Cow position:
               chr3:20562228-20561901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 121
               

               Conread position:
               23-369
               

               Cow position:
               chr3:43634199-43633853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 113
               

               Conread position:
               23-370
               

               Cow position:
               chr3:44335042-44335386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 44
               

               Conread position:
               23-384
               

               Cow position:
               chr3:55107608-55107264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               265, 56
               

               Conread position:
               24-255
               

               Cow position:
               chr3:42913896-42914139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               186
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               110, 25
               

               Conread position:
               24-328
               

               Cow position:
               chr3:75175946-75175639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               105, 24
               

               Conread position:
               24-346
               

               Cow position:
               chr3:70701478-70701804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               102, 285
               

               Conread position:
               25-298
               

               Cow position:
               chr3:38698026-38698300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               26-284
               

               Cow position:
               chr3:83948390-83948651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               98, 7
               

               Conread position:
               26-328
               

               Cow position:
               chr3:72776724-72777029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               26-348
               

               Cow position:
               chr3:79901990-79902312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 276
               

               Conread position:
               26-379
               

               Cow position:
               chr3:74233698-74234032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               246
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               65, 95
               

               Conread position:
               27-255
               

               Cow position:
               chr3:23876134-23876362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               27-255
               

               Cow position:
               chr3:33327173-33327410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               99, 66
               

               Conread position:
               27-268
               

               Cow position:
               chr3:59208235-59208478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 34
               

               Conread position:
               27-295
               

               Cow position:
               chr3:15201492-15201765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               30, 41
               

               Conread position:
               27-349
               

               Cow position:
               chr3:10958721-10958419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 103
               

               Conread position:
               27-480
               

               Cow position:
               chr3:59631013-59630561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 56
               

               Conread position:
               28-245
               

               Cow position:
               chr3:26065267-26065483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               170
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               143, 20
               

               Conread position:
               28-370
               

               Cow position:
               chr3:17331257-17331599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 268
               

               Conread position:
               28-391
               

               Cow position:
               chr3:8497262-8496898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               95, 120
               

               Conread position:
               29-391
               

               Cow position:
               chr3:53574056-53573698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               107, 30
               

               Conread position:
               30-188
               

               Cow position:
               chr3:49741454-49741296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               30-284
               

               Cow position:
               chr3:164918-165179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               28, 149
               

               Conread position:
               30-309
               

               Cow position:
               chr3:13493576-13493857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               92, 18
               

               Conread position:
               30-332
               

               Cow position:
               chr3:54680118-54679813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               119, 96
               

               Conread position:
               31-269
               

               Cow position:
               chr3:62883465-62883709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               31-348
               

               Cow position:
               chr3:42461178-42461509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               32-290
               

               Cow position:
               chr3:4319496-4319246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               32-370
               

               Cow position:
               chr3:13275557-13275219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 104
               

               Conread position:
               32-370
               

               Cow position:
               chr3:35805474-35805812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 104
               

               Conread position:
               32-373
               

               Cow position:
               chr3:24350617-24350961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 231
               

               Conread position:
               33-228
               

               Cow position:
               chr3:66118709-66118514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               154
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               33-288
               

               Cow position:
               chr3:29560423-29560168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 103
               

               Conread position:
               33-324
               

               Cow position:
               chr3:57789141-57789432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               70, 107
               

               Conread position:
               33-345
               

               Cow position:
               chr3:69510887-69510576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               224
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               95, 34
               

               Conread position:
               33-496
               

               Cow position:
               chr3:67161442-67161898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               307
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               277, 61
               

               Conread position:
               35-169
               

               Cow position:
               chr3:17461647-17461782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               35-205
               

               Cow position:
               chr3:49483495-49483323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               25, 104
               

               Conread position:
               35-261
               

               Cow position:
               chr3:6897857-6898084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               35-288
               

               Cow position:
               chr3:2630297-2630547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               175, 43
               

               Conread position:
               35-288
               

               Cow position:
               chr3:36657277-36657021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               35-324
               

               Cow position:
               chr3:45523762-45524049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 104
               

               Conread position:
               35-348
               

               Cow position:
               chr3:37040936-37041236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               222
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               188, 0
               

               Conread position:
               36-270
               

               Cow position:
               chr3:83775494-83775260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               36-345
               

               Cow position:
               chr3:40687169-40687479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               55, 212
               

               Conread position:
               36-346
               

               Cow position:
               chr3:7984445-7984134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               96, 27
               

               Conread position:
               36-348
               

               Cow position:
               chr3:5495997-5495687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               216
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               238, 31
               

               Conread position:
               36-357
               

               Cow position:
               chr3:82056612-82056300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               227
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               77, 31
               

               Conread position:
               36-480
               

               Cow position:
               chr3:4865020-4864571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               357, 0
               

               Conread position:
               36-497
               

               Cow position:
               chr3:61539294-61539760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 198
               

               Conread position:
               37-160
               

               Cow position:
               chr3:83442576-83442453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               37-246
               

               Cow position:
               chr3:15159975-15160186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               48, 24
               

               Conread position:
               37-255
               

               Cow position:
               chr3:17895306-17895530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               37-342
               

               Cow position:
               chr3:21655578-21655889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               37, 286
               

               Conread position:
               37-367
               

               Cow position:
               chr3:70130326-70129984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               86, 271
               

               Conread position:
               37-370
               

               Cow position:
               chr3:15089434-15089765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               37-370
               

               Cow position:
               chr3:60514443-60514110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 99
               

               Conread position:
               37-477
               

               Cow position:
               chr3:61678188-61678632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 41
               

               Conread position:
               37-483
               

               Cow position:
               chr3:59588020-59588463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               267, 40
               

               Conread position:
               37-497
               

               Cow position:
               chr3:31298655-31298191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 102
               

               Conread position:
               38-286
               

               Cow position:
               chr3:30322196-30322441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               38-346
               

               Cow position:
               chr3:40069190-40068890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 207
               

               Conread position:
               38-346
               

               Cow position:
               chr3:62820393-62820698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               84, 184
               

               Conread position:
               38-348
               

               Cow position:
               chr3:39857636-39857951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 237
               

               Conread position:
               39-290
               

               Cow position:
               chr3:66846767-66846510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               42-144
               

               Cow position:
               chr3:8604677-8604575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               42-225
               

               Cow position:
               chr3:46135433-46135244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               32, 129
               

               Conread position:
               42-288
               

               Cow position:
               chr3:68256583-68256830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               40, 75
               

               Conread position:
               42-324
               

               Cow position:
               chr3:73962176-73961894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 260
               

               Conread position:
               42-324
               

               Cow position:
               chr3:75938766-75938487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               83, 6
               

               Conread position:
               42-348
               

               Cow position:
               chr3:27515759-27516064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 94
               

               Conread position:
               42-356
               

               Cow position:
               chr3:59514625-59514928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               19, 168
               

               Conread position:
               42-370
               

               Cow position:
               chr3:9435465-9435793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 94
               

               Conread position:
               42-388
               

               Cow position:
               chr3:76173159-76172815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 0
               

               Conread position:
               43-254
               

               Cow position:
               chr3:30384752-30384962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               27, 73
               

               Conread position:
               43-284
               

               Cow position:
               chr3:16656963-16656723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 165
               

               Conread position:
               43-307
               

               Cow position:
               chr3:21578251-21578518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               6, 166
               

               Conread position:
               43-346
               

               Cow position:
               chr3:57464500-57464799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               85, 24
               

               Conread position:
               43-349
               

               Cow position:
               chr3:45312555-45312863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 242
               

               Conread position:
               43-374
               

               Cow position:
               chr3:58061100-58060782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               43-388
               

               Cow position:
               chr3:30192783-30192438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               82, 193
               

               Conread position:
               43-496
               

               Cow position:
               chr3:29806966-29807420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 92
               

               Conread position:
               44-284
               

               Cow position:
               chr3:39112255-39112496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               44-294
               

               Cow position:
               chr3:4871010-4871256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 91
               

               Conread position:
               44-370
               

               Cow position:
               chr3:17263319-17262992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 93
               

               Conread position:
               45-260
               

               Cow position:
               chr3:79375473-79375694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               90, 22
               

               Conread position:
               45-346
               

               Cow position:
               chr3:56153945-56154248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               81, 119
               

               Conread position:
               46-346
               

               Cow position:
               chr3:80818236-80818535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               88, 208
               

               Conread position:
               46-373
               

               Cow position:
               chr3:39065841-39066166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               48-247
               

               Cow position:
               chr3:63501735-63501536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               79, 29
               

               Conread position:
               48-251
               

               Cow position:
               chr3:82277150-82277359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               94, 150
               

               Conread position:
               48-288
               

               Cow position:
               chr3:15161556-15161330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               48-288
               

               Cow position:
               chr3:46007629-46007864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               186
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               207, 184
               

               Conread position:
               48-288
               

               Cow position:
               chr3:70335712-70335470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 192
               

               Conread position:
               48-346
               

               Cow position:
               chr3:62343943-62343642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               80, 15
               

               Conread position:
               48-348
               

               Cow position:
               chr3:83884191-83884492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               24, 13
               

               Conread position:
               48-370
               

               Cow position:
               chr3:45293745-45294069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 90
               

               Conread position:
               48-370
               

               Cow position:
               chr3:59341851-59342173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               48-370
               

               Cow position:
               chr3:66283666-66283990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 184
               

               Conread position:
               48-373
               

               Cow position:
               chr3:69486214-69486539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               48-498
               

               Cow position:
               chr3:49327456-49327898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               345, 144
               

               Conread position:
               49-265
               

               Cow position:
               chr3:11358264-11358042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               12, 8
               

               Conread position:
               49-265
               

               Cow position:
               chr3:11422122-11422349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               12, 8
               

               Conread position:
               49-266
               

               Cow position:
               chr3:11327137-11326909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               31, 145
               

               Conread position:
               49-292
               

               Cow position:
               chr3:25673620-25673372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 171
               

               Conread position:
               49-324
               

               Cow position:
               chr3:30359121-30358849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 28
               

               Conread position:
               50-388
               

               Cow position:
               chr3:52148164-52147831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               260, 127
               

               Conread position:
               52-217
               

               Cow position:
               chr3:24872270-24872437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               52-254
               

               Cow position:
               chr3:36729181-36729388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               82, 25
               

               Conread position:
               52-261
               

               Cow position:
               chr3:22716790-22716581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               52-271
               

               Cow position:
               chr3:48242249-48242030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 84
               

               Conread position:
               52-346
               

               Cow position:
               chr3:7438639-7438929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               77, 15
               

               Conread position:
               52-347
               

               Cow position:
               chr3:62912437-62912133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               52-348
               

               Cow position:
               chr3:52017273-52017566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 219
               

               Conread position:
               52-381
               

               Cow position:
               chr3:6864114-6863784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 210
               

               Conread position:
               52-381
               

               Cow position:
               chr3:55057972-55058300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 228
               

               Conread position:
               52-388
               

               Cow position:
               chr3:48370644-48370980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               89, 74
               

               Conread position:
               52-501
               

               Cow position:
               chr3:53047128-53046703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               300
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               258, 180
               

               Conread position:
               53-286
               

               Cow position:
               chr3:76157244-76157480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               73, 30
               

               Conread position:
               53-289
               

               Cow position:
               chr3:21963692-21963459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               77, 27
               

               Conread position:
               53-324
               

               Cow position:
               chr3:51013024-51012748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 89
               

               Conread position:
               53-370
               

               Cow position:
               chr3:28434894-28434577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 83
               

               Conread position:
               54-370
               

               Cow position:
               chr3:29412338-29412665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 82
               

               Conread position:
               54-518
               

               Cow position:
               chr3:65968670-65969140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               310
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               70, 142
               

               Conread position:
               55-254
               

               Cow position:
               chr3:62651579-62651783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               73, 89
               

               Conread position:
               55-288
               

               Cow position:
               chr3:20869667-20869431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               16, 61
               

               Conread position:
               56-285
               

               Cow position:
               chr3:36082296-36082068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               56-290
               

               Cow position:
               chr3:56158683-56158917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 80
               

               Conread position:
               56-291
               

               Cow position:
               chr3:13002312-13002082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               178, 0
               

               Conread position:
               56-324
               

               Cow position:
               chr3:6402815-6403082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 22
               

               Conread position:
               56-370
               

               Cow position:
               chr3:19234459-19234773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 80
               

               Conread position:
               57-369
               

               Cow position:
               chr3:12027797-12028109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               58-344
               

               Cow position:
               chr3:18985997-18986284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               12, 244
               

               Conread position:
               58-370
               

               Cow position:
               chr3:72174328-72174016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 78
               

               Conread position:
               58-459
               

               Cow position:
               chr3:997473-997878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 242
               

               Conread position:
               59-255
               

               Cow position:
               chr3:64998343-64998539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               59-259
               

               Cow position:
               chr3:48630099-48629898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               77, 143
               

               Conread position:
               59-266
               

               Cow position:
               chr3:32344277-32344066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               53, 47
               

               Conread position:
               59-270
               

               Cow position:
               chr3:174456-174664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               59-289
               

               Cow position:
               chr3:22946338-22946104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               59, 13
               

               Conread position:
               60-345
               

               Cow position:
               chr3:57403282-57402998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               230, 102
               

               Conread position:
               60-370
               

               Cow position:
               chr3:6262587-6262897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 76
               

               Conread position:
               61-348
               

               Cow position:
               chr3:3257492-3257206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               62-288
               

               Cow position:
               chr3:76155239-76155464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               62-348
               

               Cow position:
               chr3:58255985-58256261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               219, 48
               

               Conread position:
               63-370
               

               Cow position:
               chr3:51014302-51014007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               218
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               65-190
               

               Cow position:
               chr3:82270934-82271057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               66-284
               

               Cow position:
               chr3:4161077-4160859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               66-478
               

               Cow position:
               chr3:49454761-49455179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 13
               

               Conread position:
               67-246
               

               Cow position:
               chr3:75051099-75050926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               67-248
               

               Cow position:
               chr3:49337237-49337423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               67-255
               

               Cow position:
               chr3:51609296-51609484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               148
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               67-263
               

               Cow position:
               chr3:10582812-10583015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               67-270
               

               Cow position:
               chr3:4503773-4503969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               163
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               67-271
               

               Cow position:
               chr3:9420455-9420247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               69, 196
               

               Conread position:
               67-273
               

               Cow position:
               chr3:20054292-20054493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               67-282
               

               Cow position:
               chr3:20997443-20997233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               168
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               24, 29
               

               Conread position:
               67-288
               

               Cow position:
               chr3:20747052-20746830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               67-288
               

               Cow position:
               chr3:60254440-60254665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               60, 51
               

               Conread position:
               67-324
               

               Cow position:
               chr3:26712352-26712096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 75
               

               Conread position:
               67-324
               

               Cow position:
               chr3:50069316-50069564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               186, 61
               

               Conread position:
               67-345
               

               Cow position:
               chr3:68667118-68666834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               61, 248
               

               Conread position:
               67-346
               

               Cow position:
               chr3:79139457-79139174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               72, 92
               

               Conread position:
               67-348
               

               Cow position:
               chr3:68509497-68509220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 69
               

               Conread position:
               67-348
               

               Cow position:
               chr3:70371183-70370903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               61, 193
               

               Conread position:
               67-370
               

               Cow position:
               chr3:31147170-31147473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 69
               

               Conread position:
               67-370
               

               Cow position:
               chr3:42562977-42563283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               59, 174
               

               Conread position:
               67-489
               

               Cow position:
               chr3:42177685-42178107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               286
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               147, 39
               

               Conread position:
               68-201
               

               Cow position:
               chr3:19198249-19198386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               68-233
               

               Cow position:
               chr3:73544784-73544955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               68-280
               

               Cow position:
               chr3:74754506-74754728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               68-285
               

               Cow position:
               chr3:13480403-13480610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               68-347
               

               Cow position:
               chr3:9663658-9663379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 234
               

               Conread position:
               68-362
               

               Cow position:
               chr3:1133567-1133272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               71, 171
               

               Conread position:
               68-370
               

               Cow position:
               chr3:6059056-6058755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 26
               

               Conread position:
               68-388
               

               Cow position:
               chr3:62999468-62999156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               52, 124
               

               Conread position:
               69-237
               

               Cow position:
               chr3:61169329-61169495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               69-255
               

               Cow position:
               chr3:78646786-78646981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               69-346
               

               Cow position:
               chr3:22882521-22882242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               50, 236
               

               Conread position:
               69-348
               

               Cow position:
               chr3:13274848-13274569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               69-370
               

               Cow position:
               chr3:26638653-26638956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 232
               

               Conread position:
               70-195
               

               Cow position:
               chr3:56160807-56160932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               70-288
               

               Cow position:
               chr3:65273867-65273650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               70-316
               

               Cow position:
               chr3:7942835-7942587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 9
               

               Conread position:
               70-346
               

               Cow position:
               chr3:66738297-66738580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               55, 229
               

               Conread position:
               70-370
               

               Cow position:
               chr3:79075055-79074754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 67
               

               Conread position:
               71-345
               

               Cow position:
               chr3:2482990-2483259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               99, 62
               

               Conread position:
               71-477
               

               Cow position:
               chr3:20129480-20129883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 89
               

               Conread position:
               72-259
               

               Cow position:
               chr3:82359555-82359753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               72-294
               

               Cow position:
               chr3:5405706-5405478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               72-346
               

               Cow position:
               chr3:47737356-47737082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               71, 7
               

               Conread position:
               72-388
               

               Cow position:
               chr3:41947577-41947273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               72-388
               

               Cow position:
               chr3:75164366-75164066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               64, 180
               

               Conread position:
               73-255
               

               Cow position:
               chr3:44623376-44623197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               101, 5
               

               Conread position:
               73-265
               

               Cow position:
               chr3:50614173-50614371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               73-348
               

               Cow position:
               chr3:50329544-50329266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 5
               

               Conread position:
               74-348
               

               Cow position:
               chr3:55039887-55039613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               75-272
               

               Cow position:
               chr3:8752242-8752440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               47, 178
               

               Conread position:
               75-274
               

               Cow position:
               chr3:4662890-4663086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               76-436
               

               Cow position:
               chr3:28358062-28357700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 83
               

               Conread position:
               77-255
               

               Cow position:
               chr3:48275337-48275511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               77-288
               

               Cow position:
               chr3:10244855-10245066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 59
               

               Conread position:
               77-288
               

               Cow position:
               chr3:81371194-81371405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               77-298
               

               Cow position:
               chr3:12011988-12012210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 122
               

               Conread position:
               77-366
               

               Cow position:
               chr3:32485286-32485576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 59
               

               Conread position:
               77-370
               

               Cow position:
               chr3:13195345-13195637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 22
               

               Conread position:
               77-381
               

               Cow position:
               chr3:67783087-67782786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 158
               

               Conread position:
               78-216
               

               Cow position:
               chr3:78200334-78200196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               78-288
               

               Cow position:
               chr3:75710852-75711067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               172, 207
               

               Conread position:
               78-348
               

               Cow position:
               chr3:3289330-3289598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               212, 41
               

               Conread position:
               78-370
               

               Cow position:
               chr3:3301665-3301957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 59
               

               Conread position:
               79-270
               

               Cow position:
               chr3:62791433-62791246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               14, 65
               

               Conread position:
               79-348
               

               Cow position:
               chr3:18279893-18279623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               121, 223
               

               Conread position:
               79-349
               

               Cow position:
               chr3:66374869-66375130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               79-370
               

               Cow position:
               chr3:52225128-52225419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 57
               

               Conread position:
               79-480
               

               Cow position:
               chr3:47284376-47284776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               267
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               57, 176
               

               Conread position:
               80-372
               

               Cow position:
               chr3:84598512-84598220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 56
               

               Conread position:
               81-269
               

               Cow position:
               chr3:25057697-25057882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               149
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               81-288
               

               Cow position:
               chr3:61174859-61175060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               98, 60
               

               Conread position:
               81-288
               

               Cow position:
               chr3:65079378-65079172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               81-370
               

               Cow position:
               chr3:18932981-18933270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 55
               

               Conread position:
               81-479
               

               Cow position:
               chr3:42452052-42452454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 213
               

               Conread position:
               82-370
               

               Cow position:
               chr3:7696562-7696850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 54
               

               Conread position:
               82-391
               

               Cow position:
               chr3:10288157-10287849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               29, 38
               

               Conread position:
               83-288
               

               Cow position:
               chr3:4120408-4120608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               83-346
               

               Cow position:
               chr3:60174937-60174663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 213
               

               Conread position:
               83-348
               

               Cow position:
               chr3:14262939-14263201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               83-372
               

               Cow position:
               chr3:64875589-64875304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               83-501
               

               Cow position:
               chr3:41367438-41367024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 70
               

               Conread position:
               84-348
               

               Cow position:
               chr3:4457529-4457267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               226, 113
               

               Conread position:
               84-349
               

               Cow position:
               chr3:62824944-62824673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               50, 231
               

               Conread position:
               84-478
               

               Cow position:
               chr3:79220393-79220793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               265
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               15, 104
               

               Conread position:
               84-480
               

               Cow position:
               chr3:80581224-80581605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               274
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               226, 30
               

               Conread position:
               85-254
               

               Cow position:
               chr3:5416733-5416567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               85-339
               

               Cow position:
               chr3:37486244-37485984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               38, 216
               

               Conread position:
               85-480
               

               Cow position:
               chr3:22872504-22872106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 58
               

               Conread position:
               86-393
               

               Cow position:
               chr3:73812381-73812690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               51, 146
               

               Conread position:
               87-347
               

               Cow position:
               chr3:55733491-55733749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 0
               

               Conread position:
               90-288
               

               Cow position:
               chr3:8190893-8191088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               90-289
               

               Cow position:
               chr3:25090441-25090647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               38, 128
               

               Conread position:
               90-346
               

               Cow position:
               chr3:29802814-29803073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               38, 51
               

               Conread position:
               92-278
               

               Cow position:
               chr3:12671142-12670954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               92-284
               

               Cow position:
               chr3:37186389-37186581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               24, 71
               

               Conread position:
               92-324
               

               Cow position:
               chr3:57457362-57457592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               198, 42
               

               Conread position:
               92-346
               

               Cow position:
               chr3:70753915-70754175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               48, 149
               

               Conread position:
               92-347
               

               Cow position:
               chr3:522274-522533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               32, 205
               

               Conread position:
               92-348
               

               Cow position:
               chr3:47978256-47978512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 44
               

               Conread position:
               92-348
               

               Cow position:
               chr3:57577253-57577503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 118
               

               Conread position:
               92-362
               

               Cow position:
               chr3:53588846-53588568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               41, 258
               

               Conread position:
               92-370
               

               Cow position:
               chr3:15571205-15571485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               42, 71
               

               Conread position:
               92-370
               

               Cow position:
               chr3:21155158-21155436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 44
               

               Conread position:
               92-370
               

               Cow position:
               chr3:35789027-35789297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               170, 0
               

               Conread position:
               92-370
               

               Cow position:
               chr3:36728499-36728777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 44
               

               Conread position:
               92-373
               

               Cow position:
               chr3:30859320-30859601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 44
               

               Conread position:
               92-500
               

               Cow position:
               chr3:46350195-46350629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               70, 411
               

               Conread position:
               93-248
               

               Cow position:
               chr3:67830156-67830002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-370
               

               Cow position:
               chr3:67264510-67264787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 43
               

               Conread position:
               94-254
               

               Cow position:
               chr3:56059342-56059502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-348
               

               Cow position:
               chr3:79292385-79292643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               100, 29
               

               Conread position:
               94-393
               

               Cow position:
               chr3:24823524-24823828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               35, 132
               

               Conread position:
               95-255
               

               Cow position:
               chr3:78895047-78894887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               95-349
               

               Cow position:
               chr3:37599860-37599606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 207
               

               Conread position:
               95-370
               

               Cow position:
               chr3:7360264-7359989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               95-370
               

               Cow position:
               chr3:31023042-31023316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               95-372
               

               Cow position:
               chr3:10050624-10050902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 41
               

               Conread position:
               95-372
               

               Cow position:
               chr3:46128414-46128137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 41
               

               Conread position:
               95-374
               

               Cow position:
               chr3:50922125-50922401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               201
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               205, 66
               

               Conread position:
               96-288
               

               Cow position:
               chr3:14830533-14830341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               152
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               97-273
               

               Cow position:
               chr3:80469093-80468915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               97-288
               

               Cow position:
               chr3:69055754-69055951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               28, 159
               

               Conread position:
               97-324
               

               Cow position:
               chr3:77565037-77565265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               97-370
               

               Cow position:
               chr3:36374222-36374492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 39
               

               Conread position:
               97-370
               

               Cow position:
               chr3:46349830-46350103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 39
               

               Conread position:
               98-288
               

               Cow position:
               chr3:55117409-55117223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               156
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               99-225
               

               Cow position:
               chr3:1889949-1889823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-492
               

               Cow position:
               chr3:27285789-27286184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               266
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               211, 126
               

               Conread position:
               100-288
               

               Cow position:
               chr3:41679855-41680044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               155
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               157, 70
               

               Conread position:
               100-288
               

               Cow position:
               chr3:44536031-44535853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               100-322
               

               Cow position:
               chr3:31056441-31056219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 202
               

               Conread position:
               100-372
               

               Cow position:
               chr3:49768875-49769147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 36
               

               Conread position:
               101-266
               

               Cow position:
               chr3:74088599-74088434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               141
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               102-370
               

               Cow position:
               chr3:77753658-77753926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 34
               

               Conread position:
               102-459
               

               Cow position:
               chr3:31047377-31047034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               309, 34
               

               Conread position:
               102-473
               

               Cow position:
               chr3:59001177-59000819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               255
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               208, 67
               

               Conread position:
               103-348
               

               Cow position:
               chr3:30989367-30989122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 33
               

               Conread position:
               104-265
               

               Cow position:
               chr3:11277541-11277380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 31
               

               Conread position:
               104-267
               

               Cow position:
               chr3:20488548-20488712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               18, 23
               

               Conread position:
               107-348
               

               Cow position:
               chr3:41818524-41818283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               35, 153
               

               Conread position:
               108-252
               

               Cow position:
               chr3:72663041-72663185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               108-348
               

               Cow position:
               chr3:20803058-20802821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               108-367
               

               Cow position:
               chr3:24939650-24939398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               181, 64
               

               Conread position:
               109-284
               

               Cow position:
               chr3:34973452-34973277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               37, 27
               

               Conread position:
               109-348
               

               Cow position:
               chr3:49792983-49793218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               132, 174
               

               Conread position:
               110-288
               

               Cow position:
               chr3:46341029-46341210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               17, 152
               

               Conread position:
               111-218
               

               Cow position:
               chr3:58961670-58961563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               111-348
               

               Cow position:
               chr3:27674294-27674058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               35, 25
               

               Conread position:
               112-348
               

               Cow position:
               chr3:8148090-8147856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               35, 123
               

               Conread position:
               112-373
               

               Cow position:
               chr3:14863632-14863371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               34, 24
               

               Conread position:
               113-288
               

               Cow position:
               chr3:29891837-29891668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               21, 69
               

               Conread position:
               113-348
               

               Cow position:
               chr3:23072108-23072346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               113-370
               

               Cow position:
               chr3:48059848-48059591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               33, 23
               

               Conread position:
               114-288
               

               Cow position:
               chr3:48605270-48605445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               114-492
               

               Cow position:
               chr3:26903692-26904063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               251
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               196, 143
               

               Conread position:
               116-324
               

               Cow position:
               chr3:9116487-9116691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               194, 119
               

               Conread position:
               116-481
               

               Cow position:
               chr3:72675665-72676034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 87
               

               Conread position:
               116-492
               

               Cow position:
               chr3:75728012-75727630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               246
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               186, 195
               

               Conread position:
               117-370
               

               Cow position:
               chr3:48043025-48043279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               118-370
               

               Cow position:
               chr3:67398251-67397998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               118-374
               

               Cow position:
               chr3:15955123-15955380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               119-324
               

               Cow position:
               chr3:17695423-17695220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               180, 116
               

               Conread position:
               119-349
               

               Cow position:
               chr3:5851347-5851114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               191, 167
               

               Conread position:
               119-502
               

               Cow position:
               chr3:56582420-56582799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               40, 97
               

               Conread position:
               120-459
               

               Cow position:
               chr3:21341382-21341045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               191, 152
               

               Conread position:
               121-373
               

               Cow position:
               chr3:62269598-62269339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               25, 15
               

               Conread position:
               122-269
               

               Cow position:
               chr3:73394457-73394604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               122-282
               

               Cow position:
               chr3:14613980-14614140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               122-288
               

               Cow position:
               chr3:12750606-12750767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               123-249
               

               Cow position:
               chr3:44101363-44101489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               124-370
               

               Cow position:
               chr3:36802470-36802224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               125-254
               

               Cow position:
               chr3:23038007-23037879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               125-348
               

               Cow position:
               chr3:68631768-68631545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               125-348
               

               Cow position:
               chr3:77892357-77892134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               165, 174
               

               Conread position:
               125-349
               

               Cow position:
               chr3:7960026-7959802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               125-369
               

               Cow position:
               chr3:4289129-4289372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               125-370
               

               Cow position:
               chr3:470350-470105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               125-370
               

               Cow position:
               chr3:5362036-5361791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               125-370
               

               Cow position:
               chr3:49531032-49530787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               126-288
               

               Cow position:
               chr3:36230151-36230313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               126-369
               

               Cow position:
               chr3:64198068-64198310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               126-477
               

               Cow position:
               chr3:4461901-4461555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               262, 94
               

               Conread position:
               127-272
               

               Cow position:
               chr3:115809-115954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               127-288
               

               Cow position:
               chr3:17885273-17885434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               127-320
               

               Cow position:
               chr3:29171972-29172164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               127-346
               

               Cow position:
               chr3:4344180-4344400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               112, 184
               

               Conread position:
               127-346
               

               Cow position:
               chr3:68357784-68357565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               163, 182
               

               Conread position:
               128-284
               

               Cow position:
               chr3:83845198-83845354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               128-288
               

               Cow position:
               chr3:9676759-9676594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               128-328
               

               Cow position:
               chr3:70840555-70840359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               128-346
               

               Cow position:
               chr3:39554725-39554514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               8, 85
               

               Conread position:
               129-288
               

               Cow position:
               chr3:20663948-20663789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               129-289
               

               Cow position:
               chr3:74109983-74110146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               129-346
               

               Cow position:
               chr3:51315080-51315289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               11, 76
               

               Conread position:
               129-346
               

               Cow position:
               chr3:55301161-55300944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               10, 152
               

               Conread position:
               129-370
               

               Cow position:
               chr3:82315010-82314776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               131-282
               

               Cow position:
               chr3:39328004-39328155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               131-284
               

               Cow position:
               chr3:16004392-16004241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               132-348
               

               Cow position:
               chr3:42930078-42929862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               137-358
               

               Cow position:
               chr3:35073952-35074173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               123, 156
               

               Conread position:
               137-389
               

               Cow position:
               chr3:17680762-17681012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               112, 54
               

               Conread position:
               138-346
               

               Cow position:
               chr3:43105170-43105383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               138-346
               

               Cow position:
               chr3:60618225-60618433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               139-288
               

               Cow position:
               chr3:67388778-67388928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               139-346
               

               Cow position:
               chr3:74144773-74144566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               190, 70
               

               Conread position:
               142-262
               

               Cow position:
               chr3:14072469-14072591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               142-370
               

               Cow position:
               chr3:44352333-44352561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               143-249
               

               Cow position:
               chr3:70334224-70334120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               143-253
               

               Cow position:
               chr3:42905505-42905394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               143-267
               

               Cow position:
               chr3:67930992-67931116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               143-270
               

               Cow position:
               chr3:76138044-76138171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               143-288
               

               Cow position:
               chr3:64716627-64716771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               143-291
               

               Cow position:
               chr3:84597598-84597450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               143-323
               

               Cow position:
               chr3:26980960-26981135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               143-325
               

               Cow position:
               chr3:68586645-68586824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               167, 92
               

               Conread position:
               143-332
               

               Cow position:
               chr3:30355829-30356016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               143-343
               

               Cow position:
               chr3:6880538-6880733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 108
               

               Conread position:
               143-346
               

               Cow position:
               chr3:75143427-75143225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               143-348
               

               Cow position:
               chr3:16752643-16752444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               143-349
               

               Cow position:
               chr3:6853899-6853691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               105, 140
               

               Conread position:
               143-370
               

               Cow position:
               chr3:40101067-40100844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               61, 67
               

               Conread position:
               143-370
               

               Cow position:
               chr3:55246222-55246449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               143-374
               

               Cow position:
               chr3:18179354-18179584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               143-374
               

               Cow position:
               chr3:34526040-34525810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               143-387
               

               Cow position:
               chr3:7338173-7337926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               137, 77
               

               Conread position:
               143-467
               

               Cow position:
               chr3:18715881-18715553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               19, 157
               

               Conread position:
               143-483
               

               Cow position:
               chr3:15662094-15661756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               233
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               156, 92
               

               Conread position:
               143-483
               

               Cow position:
               chr3:19708493-19708160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               250, 89
               

               Conread position:
               143-489
               

               Cow position:
               chr3:13899850-13899497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               6, 157
               

               Conread position:
               143-492
               

               Cow position:
               chr3:7408088-7408441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               164, 40
               

               Conread position:
               144-384
               

               Cow position:
               chr3:34953259-34953499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-285
               

               Cow position:
               chr3:33021248-33021388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-288
               

               Cow position:
               chr3:904919-904783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               145-291
               

               Cow position:
               chr3:64749087-64749233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-324
               

               Cow position:
               chr3:22196678-22196499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-349
               

               Cow position:
               chr3:37020470-37020267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               200, 0
               

               Conread position:
               145-370
               

               Cow position:
               chr3:5117036-5117261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-370
               

               Cow position:
               chr3:24166170-24166389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               145-370
               

               Cow position:
               chr3:28747989-28748216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               190, 175
               

               Conread position:
               145-370
               

               Cow position:
               chr3:30609693-30609468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-370
               

               Cow position:
               chr3:49948564-49948789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-370
               

               Cow position:
               chr3:55417561-55417336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-382
               

               Cow position:
               chr3:35433142-35433376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               146-325
               

               Cow position:
               chr3:14627629-14627449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               146-348
               

               Cow position:
               chr3:78559760-78559558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               146-459
               

               Cow position:
               chr3:8716854-8717169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               227, 146
               

               Conread position:
               147-370
               

               Cow position:
               chr3:2874894-2874671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               147-373
               

               Cow position:
               chr3:69945325-69945105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 10
               

               Conread position:
               148-284
               

               Cow position:
               chr3:23992843-23992979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               148-349
               

               Cow position:
               chr3:63945366-63945166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               80, 12
               

               Conread position:
               148-370
               

               Cow position:
               chr3:73393670-73393449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               148-374
               

               Cow position:
               chr3:20137244-20137018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               142, 151
               

               Conread position:
               149-288
               

               Cow position:
               chr3:6433906-6434044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               149-322
               

               Cow position:
               chr3:5365295-5365469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               100, 144
               

               Conread position:
               149-357
               

               Cow position:
               chr3:54015217-54015008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               61, 94
               

               Conread position:
               149-479
               

               Cow position:
               chr3:31500965-31501291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               262, 78
               

               Conread position:
               150-349
               

               Cow position:
               chr3:69849891-69849692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               152, 162
               

               Conread position:
               150-373
               

               Cow position:
               chr3:66136509-66136285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               94, 150
               

               Conread position:
               150-483
               

               Cow position:
               chr3:12712315-12711974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 155
               

               Conread position:
               151-288
               

               Cow position:
               chr3:18895394-18895531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               151-345
               

               Cow position:
               chr3:71257597-71257401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               151-348
               

               Cow position:
               chr3:10017726-10017923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               139, 148
               

               Conread position:
               151-349
               

               Cow position:
               chr3:11026538-11026735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               151, 160
               

               Conread position:
               152-304
               

               Cow position:
               chr3:7650764-7650919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               152-307
               

               Cow position:
               chr3:73513022-73512868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               154-255
               

               Cow position:
               chr3:35369274-35369375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               154-346
               

               Cow position:
               chr3:13470020-13469830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               154-370
               

               Cow position:
               chr3:45986144-45986360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               154-373
               

               Cow position:
               chr3:13291498-13291718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               154-525
               

               Cow position:
               chr3:53593084-53592709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               156, 81
               

               Conread position:
               155-288
               

               Cow position:
               chr3:79272174-79272039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               155-373
               

               Cow position:
               chr3:31771312-31771528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               29, 129
               

               Conread position:
               155-373
               

               Cow position:
               chr3:49382568-49382786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               155, 141
               

               Conread position:
               156-370
               

               Cow position:
               chr3:2594743-2594955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               156-453
               

               Cow position:
               chr3:40689336-40689042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               220, 50
               

               Conread position:
               157-348
               

               Cow position:
               chr3:23286191-23286003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               157-370
               

               Cow position:
               chr3:859353-859566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               158-284
               

               Cow position:
               chr3:68146205-68146076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               91, 62
               

               Conread position:
               158-288
               

               Cow position:
               chr3:5064712-5064842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               158-288
               

               Cow position:
               chr3:11986950-11987079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               158-288
               

               Cow position:
               chr3:37646682-37646812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               158-324
               

               Cow position:
               chr3:72169101-72168936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               152, 74
               

               Conread position:
               158-347
               

               Cow position:
               chr3:54782392-54782203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               142, 89
               

               Conread position:
               158-370
               

               Cow position:
               chr3:22511301-22511088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               123, 142
               

               Conread position:
               158-374
               

               Cow position:
               chr3:28597245-28597034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               132, 12
               

               Conread position:
               158-391
               

               Cow position:
               chr3:68291188-68291417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               159-288
               

               Cow position:
               chr3:24934979-24935105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               80, 32
               

               Conread position:
               159-291
               

               Cow position:
               chr3:34151428-34151296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               159-325
               

               Cow position:
               chr3:9806122-9806288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               130, 146
               

               Conread position:
               159-378
               

               Cow position:
               chr3:7763289-7763503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               139, 20
               

               Conread position:
               159-501
               

               Cow position:
               chr3:18066754-18067097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               151, 143
               

               Conread position:
               160-288
               

               Cow position:
               chr3:58835448-58835320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               160-370
               

               Cow position:
               chr3:49230636-49230841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               170, 111
               

               Conread position:
               160-374
               

               Cow position:
               chr3:10411125-10410912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               150, 50
               

               Conread position:
               160-467
               

               Cow position:
               chr3:16380956-16380645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               131, 140
               

               Conread position:
               160-496
               

               Cow position:
               chr3:49461316-49460972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               153, 142
               

               Conread position:
               161-269
               

               Cow position:
               chr3:17456868-17456763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               161-274
               

               Cow position:
               chr3:29240430-29240543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 7
               

               Conread position:
               161-275
               

               Cow position:
               chr3:61894629-61894744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               161-284
               

               Cow position:
               chr3:75050424-75050301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               161-345
               

               Cow position:
               chr3:78782596-78782779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               120, 139
               

               Conread position:
               161-346
               

               Cow position:
               chr3:40630131-40629945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               89, 128
               

               Conread position:
               161-348
               

               Cow position:
               chr3:68514927-68514741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               161-391
               

               Cow position:
               chr3:56375923-56376156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               106, 147
               

               Conread position:
               161-480
               

               Cow position:
               chr3:4331979-4332307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               212
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               20, 144
               

               Conread position:
               161-491
               

               Cow position:
               chr3:13352982-13353312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               96, 100
               

               Conread position:
               162-346
               

               Cow position:
               chr3:38018077-38017897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               120, 80
               

               Conread position:
               162-348
               

               Cow position:
               chr3:59604495-59604678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               148, 21
               

               Conread position:
               162-361
               

               Cow position:
               chr3:35488525-35488325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               129, 138
               

               Conread position:
               163-348
               

               Cow position:
               chr3:3651439-3651255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               163-370
               

               Cow position:
               chr3:19977830-19977623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               163-459
               

               Cow position:
               chr3:31206497-31206792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               147, 45
               

               Conread position:
               164-288
               

               Cow position:
               chr3:26931264-26931140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               164-346
               

               Cow position:
               chr3:73305735-73305917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               164-373
               

               Cow position:
               chr3:22021346-22021139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               126, 47
               

               Conread position:
               164-481
               

               Cow position:
               chr3:53221653-53221955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               247, 63
               

               Conread position:
               164-495
               

               Cow position:
               chr3:8159580-8159909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               297, 116
               

               Conread position:
               166-284
               

               Cow position:
               chr3:79905285-79905167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               166-388
               

               Cow position:
               chr3:36672377-36672154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               133, 42
               

               Conread position:
               166-391
               

               Cow position:
               chr3:28879352-28879577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               168-288
               

               Cow position:
               chr3:62541943-62542063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               168-288
               

               Cow position:
               chr3:73926536-73926416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               169-288
               

               Cow position:
               chr3:15786193-15786312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               169-348
               

               Cow position:
               chr3:21112990-21112813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               170-288
               

               Cow position:
               chr3:59621973-59621858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               170-348
               

               Cow position:
               chr3:56697570-56697748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               170-370
               

               Cow position:
               chr3:6193118-6192918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               170-388
               

               Cow position:
               chr3:37580693-37580469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               171-348
               

               Cow position:
               chr3:65672539-65672716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               171-381
               

               Cow position:
               chr3:42885313-42885523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               171-459
               

               Cow position:
               chr3:83816169-83815873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               84, 139
               

               Conread position:
               172-348
               

               Cow position:
               chr3:53573117-53572941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               172-370
               

               Cow position:
               chr3:75265140-75264942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               172-370
               

               Cow position:
               chr3:83479209-83479407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               173-492
               

               Cow position:
               chr3:79884852-79884529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               137, 107
               

               Conread position:
               174-284
               

               Cow position:
               chr3:53429253-53429146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               174-348
               

               Cow position:
               chr3:5101125-5100952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               136, 121
               

               Conread position:
               174-370
               

               Cow position:
               chr3:79921456-79921260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               175-349
               

               Cow position:
               chr3:55190109-55189940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               135, 23
               

               Conread position:
               176-370
               

               Cow position:
               chr3:54495700-54495894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               177-384
               

               Cow position:
               chr3:71488679-71488475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               134, 12
               

               Conread position:
               177-459
               

               Cow position:
               chr3:68647798-68648082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               113, 119
               

               Conread position:
               179-370
               

               Cow position:
               chr3:5394330-5394139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               182-322
               

               Cow position:
               chr3:32363930-32363790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               183-324
               

               Cow position:
               chr3:51604963-51604822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               107, 114
               

               Conread position:
               183-348
               

               Cow position:
               chr3:69766592-69766428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               127, 109
               

               Conread position:
               183-459
               

               Cow position:
               chr3:53149970-53150245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               66, 168
               

               Conread position:
               184-322
               

               Cow position:
               chr3:55319111-55319249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               126, 118
               

               Conread position:
               184-373
               

               Cow position:
               chr3:37637331-37637142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               184-497
               

               Cow position:
               chr3:17952301-17952613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               275, 201
               

               Conread position:
               185-356
               

               Cow position:
               chr3:70449993-70450164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               122, 108
               

               Conread position:
               186-288
               

               Cow position:
               chr3:48994735-48994837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               187-357
               

               Cow position:
               chr3:12323716-12323879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               123, 83
               

               Conread position:
               187-374
               

               Cow position:
               chr3:66805418-66805604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               189-483
               

               Cow position:
               chr3:71497496-71497197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               110, 97
               

               Conread position:
               190-467
               

               Cow position:
               chr3:22481456-22481177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               103, 49
               

               Conread position:
               191-370
               

               Cow position:
               chr3:72801700-72801521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               192-346
               

               Cow position:
               chr3:76901847-76901998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               192-484
               

               Cow position:
               chr3:17222498-17222199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               54, 71
               

               Conread position:
               194-335
               

               Cow position:
               chr3:3086254-3086395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               194-335
               

               Cow position:
               chr3:61922395-61922536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               194-348
               

               Cow position:
               chr3:37662804-37662958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               194-348
               

               Cow position:
               chr3:43028722-43028568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               194-369
               

               Cow position:
               chr3:22632593-22632768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               194-370
               

               Cow position:
               chr3:11186871-11186695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               194-381
               

               Cow position:
               chr3:30394959-30394774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               197-322
               

               Cow position:
               chr3:15377766-15377641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               89, 98
               

               Conread position:
               197-348
               

               Cow position:
               chr3:58283352-58283201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               110, 96
               

               Conread position:
               197-349
               

               Cow position:
               chr3:209980-210133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               197-349
               

               Cow position:
               chr3:16547334-16547486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               105, 113
               

               Conread position:
               197-370
               

               Cow position:
               chr3:11561-11734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               198-348
               

               Cow position:
               chr3:36126312-36126462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               199-370
               

               Cow position:
               chr3:16233919-16233748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               199-461
               

               Cow position:
               chr3:61857156-61857421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               194, 258
               

               Conread position:
               200-370
               

               Cow position:
               chr3:26218055-26217885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               203-347
               

               Cow position:
               chr3:76614307-76614450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               107, 34
               

               Conread position:
               203-370
               

               Cow position:
               chr3:27143301-27143468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               204-382
               

               Cow position:
               chr3:80973018-80973196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               205-479
               

               Cow position:
               chr3:78076858-78077128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               105, 31
               

               Conread position:
               206-370
               

               Cow position:
               chr3:51362502-51362338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               36, 31
               

               Conread position:
               206-381
               

               Cow position:
               chr3:68650486-68650661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               211-374
               

               Cow position:
               chr3:78088775-78088612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               211-502
               

               Cow position:
               chr3:2397111-2396817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               101, 91
               

               Conread position:
               212-478
               

               Cow position:
               chr3:83920874-83921135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               181, 24
               

               Conread position:
               222-488
               

               Cow position:
               chr3:53112851-53113121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               76, 64
               
Show alignments to all cow chromosomes.
Conread position:	1-195
Cow position:	chr3:23944586-23944777 (view UCSC Genome Browser custom track)
Alignm length:	200
Alignm identity:	144
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	123, 69
Conread position:	1-223
Cow position:	chr3:46225946-46226171 (view UCSC Genome Browser custom track)
Alignm length:	230
Alignm identity:	168
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	124, 58
Conread position:	1-253
Cow position:	chr3:1483651-1483904 (view UCSC Genome Browser custom track)
Alignm length:	257
Alignm identity:	180
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	132, 86
Conread position:	1-322
Cow position:	chr3:34086597-34086280 (view UCSC Genome Browser custom track)
Alignm length:	330
Alignm identity:	225
Alignm E-value:	6e-33
Alignm gaps (pig, cow):	144, 12
Conread position:	1-332
Cow position:	chr3:74140247-74139910 (view UCSC Genome Browser custom track)
Alignm length:	339
Alignm identity:	227
Alignm E-value:	4e-39
Alignm gaps (pig, cow):	125, 254
Conread position:	1-346
Cow position:	chr3:38252443-38252799 (view UCSC Genome Browser custom track)
Alignm length:	366
Alignm identity:	252
Alignm E-value:	3e-37
Alignm gaps (pig, cow):	127, 66
Conread position:	2-122
Cow position:	chr3:80276999-80276878 (view UCSC Genome Browser custom track)
Alignm length:	122
Alignm identity:	97
Alignm E-value:	7e-24
Alignm gaps (pig, cow):	64, 0
Conread position:	2-131
Cow position:	chr3:5461583-5461712 (view UCSC Genome Browser custom track)
Alignm length:	131
Alignm identity:	103
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	90, 37
Conread position:	2-192
Cow position:	chr3:32878982-32878785 (view UCSC Genome Browser custom track)
Alignm length:	198
Alignm identity:	140
Alignm E-value:	7e-24
Alignm gaps (pig, cow):	14, 0
Conread position:	2-195
Cow position:	chr3:25802800-25802999 (view UCSC Genome Browser custom track)
Alignm length:	200
Alignm identity:	145
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	123, 0
Conread position:	2-207
Cow position:	chr3:4326471-4326673 (view UCSC Genome Browser custom track)
Alignm length:	210
Alignm identity:	155
Alignm E-value:	5e-31
Alignm gaps (pig, cow):	120, 25
Conread position:	2-217
Cow position:	chr3:39949458-39949247 (view UCSC Genome Browser custom track)
Alignm length:	223
Alignm identity:	158
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	72, 46
Conread position:	2-218
Cow position:	chr3:63198924-63199156 (view UCSC Genome Browser custom track)
Alignm length:	233
Alignm identity:	165
Alignm E-value:	9e-27
Alignm gaps (pig, cow):	46, 0
Conread position:	2-221
Cow position:	chr3:65276528-65276310 (view UCSC Genome Browser custom track)
Alignm length:	222
Alignm identity:	166
Alignm E-value:	4e-39
Alignm gaps (pig, cow):	132, 174
Conread position:	2-223
Cow position:	chr3:27784591-27784818 (view UCSC Genome Browser custom track)
Alignm length:	228
Alignm identity:	174
Alignm E-value:	6.02558e-44
Alignm gaps (pig, cow):	132, 0
Conread position:	2-228
Cow position:	chr3:74083994-74084225 (view UCSC Genome Browser custom track)
Alignm length:	232
Alignm identity:	160
Alignm E-value:	3e-28
Alignm gaps (pig, cow):	114, 0
Conread position:	2-231
Cow position:	chr3:3791930-3792165 (view UCSC Genome Browser custom track)
Alignm length:	237
Alignm identity:	171
Alignm E-value:	6e-34
Alignm gaps (pig, cow):	126, 76
Conread position:	2-233
Cow position:	chr3:34099675-34099443 (view UCSC Genome Browser custom track)
Alignm length:	238
Alignm identity:	165
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	123, 70
Conread position:	2-238
Cow position:	chr3:16868573-16868338 (view UCSC Genome Browser custom track)
Alignm length:	238
Alignm identity:	164
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	165, 131
Conread position:	2-239
Cow position:	chr3:2226499-2226744 (view UCSC Genome Browser custom track)
Alignm length:	246
Alignm identity:	182
Alignm E-value:	4.00001e-41
Alignm gaps (pig, cow):	69, 0