Cow genome map

Conread name: Ss1.1-MPL-MPL384_8_I21.5

Conread position: 1-117
Cow position: chr5:1260803-1260687 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-138
Cow position: chr5:31785817-31785954 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-193
Cow position: chr5:31603875-31603677 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 1-225
Cow position: chr5:3439803-3439573 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 129, 0

Conread position: 1-253
Cow position: chr5:18902078-18902330 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-255
Cow position: chr5:4199101-4198848 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 30

Conread position: 1-342
Cow position: chr5:51819038-51819392 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 244
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 75, 86

Conread position: 1-346
Cow position: chr5:75185184-75184839 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 234
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 47, 36

Conread position: 1-358
Cow position: chr5:23006597-23006238 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 255
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 127, 39

Conread position: 2-122
Cow position: chr5:57125541-57125661 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-130
Cow position: chr5:48238938-48238806 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 2-167
Cow position: chr5:48405488-48405319 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 128, 0

Conread position: 2-168
Cow position: chr5:41228512-41228342 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 46

Conread position: 2-169
Cow position: chr5:5454985-5454816 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 115, 52

Conread position: 2-188
Cow position: chr5:54351639-54351453 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 2-189
Cow position: chr5:42676781-42676969 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 140, 0

Conread position: 2-192
Cow position: chr5:72041718-72041914 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 132, 0

Conread position: 2-204
Cow position: chr5:33793402-33793601 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 123, 51

Conread position: 2-213
Cow position: chr5:34915729-34915512 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 70, 174

Conread position: 2-218
Cow position: chr5:44115070-44114849 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 145

Conread position: 2-228
Cow position: chr5:54110733-54110979 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 2-233
Cow position: chr5:3441961-3442186 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 129, 0

Conread position: 2-233
Cow position: chr5:6286832-6286600 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 60, 0

Conread position: 2-233
Cow position: chr5:19131059-19131290 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 2-233
Cow position: chr5:49566590-49566824 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 128, 65

Conread position: 2-233
Cow position: chr5:60490560-60490333 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 2-240
Cow position: chr5:60186360-60186600 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 126, 46

Conread position: 2-246
Cow position: chr5:23683575-23683329 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 143, 52

Conread position: 2-246
Cow position: chr5:26045806-26046055 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 64, 75

Conread position: 2-248
Cow position: chr5:3640014-3639769 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 0

Conread position: 2-249
Cow position: chr5:37047442-37047695 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 143, 0

Conread position: 2-255
Cow position: chr5:21784250-21783991 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 127, 0

Conread position: 2-255
Cow position: chr5:31661652-31661403 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 140, 19

Conread position: 2-255
Cow position: chr5:35261982-35262231 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 127, 26

Conread position: 2-256
Cow position: chr5:52437620-52437877 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 73, 46

Conread position: 2-259
Cow position: chr5:49478836-49479099 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 111, 54

Conread position: 2-259
Cow position: chr5:57941377-57941114 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 119, 143

Conread position: 2-265
Cow position: chr5:27656391-27656650 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 64, 182

Conread position: 2-268
Cow position: chr5:31784326-31784595 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 128, 214

Conread position: 2-268
Cow position: chr5:32070560-32070285 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 134, 75

Conread position: 2-284
Cow position: chr5:14833100-14832814 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 259

Conread position: 2-284
Cow position: chr5:24485902-24485620 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 131

Conread position: 2-284
Cow position: chr5:50167426-50167713 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 192
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 123, 152

Conread position: 2-288
Cow position: chr5:17027601-17027896 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 2-288
Cow position: chr5:32391046-32390761 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 132, 84

Conread position: 2-288
Cow position: chr5:41608827-41609104 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 141, 70

Conread position: 2-288
Cow position: chr5:65053207-65053499 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 20

Conread position: 2-288
Cow position: chr5:74462523-74462235 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 199
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 84

Conread position: 2-289
Cow position: chr5:50201476-50201186 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 120, 106

Conread position: 2-290
Cow position: chr5:32164409-32164132 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 283, 155

Conread position: 2-290
Cow position: chr5:49912559-49912851 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 123, 65

Conread position: 2-291
Cow position: chr5:3696480-3696764 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 0

Conread position: 2-319
Cow position: chr5:31643136-31643457 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 206
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 108, 142

Conread position: 2-322
Cow position: chr5:4630629-4630959 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 237
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 87, 261

Conread position: 2-325
Cow position: chr5:38286606-38286937 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 299

Conread position: 2-328
Cow position: chr5:21555555-21555224 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 232
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 94, 240

Conread position: 2-343
Cow position: chr5:33189736-33190081 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 224

Conread position: 2-344
Cow position: chr5:19817294-19816951 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 234
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 79, 174

Conread position: 2-345
Cow position: chr5:30359745-30359400 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 141

Conread position: 2-345
Cow position: chr5:48225054-48224720 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 245
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 139, 65

Conread position: 2-345
Cow position: chr5:66352094-66352430 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 235
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 51, 147

Conread position: 2-346
Cow position: chr5:18459458-18459120 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 240
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 130, 238

Conread position: 2-346
Cow position: chr5:21547767-21547441 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 239
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 37, 53

Conread position: 2-346
Cow position: chr5:22649068-22649421 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 20, 228

Conread position: 2-346
Cow position: chr5:22769968-22770317 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 51, 303

Conread position: 2-346
Cow position: chr5:27007401-27007751 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 50

Conread position: 2-346
Cow position: chr5:28650771-28651103 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 231
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 229, 26

Conread position: 2-346
Cow position: chr5:44379978-44380334 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 308

Conread position: 2-346
Cow position: chr5:46611592-46611230 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 260
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 77, 265

Conread position: 2-346
Cow position: chr5:49127244-49127606 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 78

Conread position: 2-346
Cow position: chr5:55684637-55684983 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 92

Conread position: 2-346
Cow position: chr5:62272545-62272201 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 139

Conread position: 2-346
Cow position: chr5:65648148-65647797 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 230
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 64, 78

Conread position: 2-346
Cow position: chr5:72902063-72902414 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 10

Conread position: 2-348
Cow position: chr5:18127147-18127502 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 243
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 37, 47

Conread position: 2-348
Cow position: chr5:27903934-27904271 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 143, 150

Conread position: 2-349
Cow position: chr5:4328788-4329146 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 132, 65

Conread position: 2-354
Cow position: chr5:25930378-25930025 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 241
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 124, 229

Conread position: 2-355
Cow position: chr5:8819817-8819462 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 109

Conread position: 2-355
Cow position: chr5:57716615-57716971 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 243
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 121, 78

Conread position: 2-356
Cow position: chr5:14654010-14653647 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 236
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 123, 21

Conread position: 2-369
Cow position: chr5:42982526-42982892 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 248
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 129, 65

Conread position: 2-370
Cow position: chr5:31103818-31104182 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 252
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 60, 46

Conread position: 2-374
Cow position: chr5:17982876-17982506 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 0

Conread position: 2-384
Cow position: chr5:70608503-70608891 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 208

Conread position: 2-388
Cow position: chr5:3695902-3696287 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 267
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 127, 37

Conread position: 2-388
Cow position: chr5:15088697-15089085 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 247

Conread position: 2-391
Cow position: chr5:40270220-40269830 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 260

Conread position: 2-391
Cow position: chr5:46597188-46597583 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 261
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 69, 241

Conread position: 2-391
Cow position: chr5:50863870-50864265 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 263
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 138, 34

Conread position: 2-480
Cow position: chr5:21828368-21828856 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 374

Conread position: 2-492
Cow position: chr5:34232236-34232744 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 331
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 122, 94

Conread position: 3-117
Cow position: chr5:2394776-2394662 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-117
Cow position: chr5:30567199-30567085 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-117
Cow position: chr5:44532802-44532916 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-122
Cow position: chr5:13205862-13205743 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-122
Cow position: chr5:39936640-39936758 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 3-134
Cow position: chr5:48799085-48799216 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-135
Cow position: chr5:35724775-35724907 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-139
Cow position: chr5:11834924-11834787 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 3-146
Cow position: chr5:58353918-58354060 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 120, 0

Conread position: 3-147
Cow position: chr5:29459874-29460018 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 71, 64

Conread position: 3-149
Cow position: chr5:5849141-5848995 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 3-153
Cow position: chr5:32964522-32964372 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-154
Cow position: chr5:45966161-45966012 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 133, 0

Conread position: 3-161
Cow position: chr5:4551808-4551651 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 3-167
Cow position: chr5:1640337-1640173 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 3-167
Cow position: chr5:75745259-75745421 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 3-168
Cow position: chr5:6773103-6773268 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 143, 133

Conread position: 3-168
Cow position: chr5:44611440-44611605 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-170
Cow position: chr5:8024680-8024510 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 3-182
Cow position: chr5:5685743-5685565 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 143, 64

Conread position: 3-187
Cow position: chr5:34584656-34584471 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 124, 0

Conread position: 3-189
Cow position: chr5:50483400-50483214 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 3-194
Cow position: chr5:61147306-61147497 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 154
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 143, 133

Conread position: 3-198
Cow position: chr5:5126780-5126588 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 138, 69

Conread position: 3-198
Cow position: chr5:46625741-46625551 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 3-200
Cow position: chr5:17425007-17424815 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 3-205
Cow position: chr5:38832409-38832611 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 85, 100

Conread position: 3-205
Cow position: chr5:62159384-62159168 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 3-208
Cow position: chr5:1766782-1766576 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 65, 0

Conread position: 3-209
Cow position: chr5:43350332-43350538 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 143, 133

Conread position: 3-210
Cow position: chr5:6576049-6575839 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 183, 0

Conread position: 3-215
Cow position: chr5:68604298-68604510 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 3-217
Cow position: chr5:24946912-24947132 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 122, 0

Conread position: 3-219
Cow position: chr5:11834642-11834425 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 134

Conread position: 3-219
Cow position: chr5:65600938-65601155 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 55, 134

Conread position: 3-222
Cow position: chr5:40050438-40050217 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 122, 135

Conread position: 3-225
Cow position: chr5:24996934-24996719 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 49, 0

Conread position: 3-228
Cow position: chr5:69460916-69461142 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 3-231
Cow position: chr5:23673377-23673147 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 89, 156

Conread position: 3-233
Cow position: chr5:4682963-4682734 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 143, 110

Conread position: 3-233
Cow position: chr5:7066685-7066455 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-233
Cow position: chr5:36406684-36406920 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 180
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 113, 35

Conread position: 3-233
Cow position: chr5:43991797-43992038 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 62, 0

Conread position: 3-233
Cow position: chr5:53835208-53835437 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 3-233
Cow position: chr5:69771689-69771926 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 84, 0

Conread position: 3-233
Cow position: chr5:74025252-74025020 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 122, 77

Conread position: 3-243
Cow position: chr5:12563547-12563299 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 136, 28

Conread position: 3-243
Cow position: chr5:64823789-64823547 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 77

Conread position: 3-244
Cow position: chr5:57074803-57074563 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 0

Conread position: 3-245
Cow position: chr5:73525840-73526086 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 142, 64

Conread position: 3-246
Cow position: chr5:25495873-25495629 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 70, 0

Conread position: 3-246
Cow position: chr5:68871682-68871915 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 60, 0

Conread position: 3-247
Cow position: chr5:5826808-5826564 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-247
Cow position: chr5:6839635-6839385 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 3-247
Cow position: chr5:27193538-27193294 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 143, 133

Conread position: 3-247
Cow position: chr5:34669557-34669314 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 0

Conread position: 3-247
Cow position: chr5:62573606-62573848 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 168, 233

Conread position: 3-248
Cow position: chr5:39874249-39874508 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 127, 0

Conread position: 3-248
Cow position: chr5:63388261-63388506 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-249
Cow position: chr5:57625906-57626141 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 140, 0

Conread position: 3-252
Cow position: chr5:3971060-3971307 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 0

Conread position: 3-253
Cow position: chr5:34115155-34115411 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 3-253
Cow position: chr5:64176670-64176417 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 185
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 146, 73

Conread position: 3-254
Cow position: chr5:2310068-2309818 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 241

Conread position: 3-254
Cow position: chr5:24126347-24126105 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 133, 0

Conread position: 3-254
Cow position: chr5:37432286-37432037 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 27

Conread position: 3-254
Cow position: chr5:37436654-37436905 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-254
Cow position: chr5:58748281-58748531 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 132, 64

Conread position: 3-255
Cow position: chr5:1246753-1247006 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 3-255
Cow position: chr5:6032508-6032760 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-255
Cow position: chr5:6670642-6670391 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 3-255
Cow position: chr5:20779943-20779681 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 3-255
Cow position: chr5:26156455-26156203 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-255
Cow position: chr5:31918144-31918387 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 142, 74

Conread position: 3-255
Cow position: chr5:32088247-32087998 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 0

Conread position: 3-255
Cow position: chr5:35967714-35967972 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 3-255
Cow position: chr5:50064072-50064325 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 126, 141

Conread position: 3-255
Cow position: chr5:51502411-51502663 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 123, 62

Conread position: 3-255
Cow position: chr5:58145121-58144874 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 158, 64

Conread position: 3-256
Cow position: chr5:3582090-3582345 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 3-256
Cow position: chr5:34923612-34923359 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-259
Cow position: chr5:4032498-4032238 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 127, 110

Conread position: 3-259
Cow position: chr5:10790205-10789934 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 182
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 111, 245

Conread position: 3-259
Cow position: chr5:20808171-20808431 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 125, 11

Conread position: 3-259
Cow position: chr5:24643299-24643045 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 129, 159

Conread position: 3-259
Cow position: chr5:27172434-27172177 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 253

Conread position: 3-259
Cow position: chr5:28229639-28229896 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 3-259
Cow position: chr5:34300406-34300660 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 69

Conread position: 3-259
Cow position: chr5:68480712-68480979 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 112, 0

Conread position: 3-260
Cow position: chr5:32697272-32697028 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 192
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 93, 0

Conread position: 3-266
Cow position: chr5:41363241-41362979 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 72

Conread position: 3-267
Cow position: chr5:23641483-23641210 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 123, 247

Conread position: 3-267
Cow position: chr5:55820892-55821161 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 184

Conread position: 3-268
Cow position: chr5:31507843-31507579 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 124, 223

Conread position: 3-269
Cow position: chr5:1639207-1639485 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 147, 133

Conread position: 3-269
Cow position: chr5:10065898-10065638 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 7

Conread position: 3-269
Cow position: chr5:49428782-49428511 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 19

Conread position: 3-269
Cow position: chr5:62377895-62378167 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 64, 142

Conread position: 3-270
Cow position: chr5:41546378-41546110 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 3-272
Cow position: chr5:48026805-48027074 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-274
Cow position: chr5:34192459-34192733 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 240

Conread position: 3-282
Cow position: chr5:56820775-56821045 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 173

Conread position: 3-283
Cow position: chr5:50599585-50599859 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 3-284
Cow position: chr5:20408145-20407869 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 0

Conread position: 3-284
Cow position: chr5:23777815-23778096 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-284
Cow position: chr5:39242832-39242550 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 46

Conread position: 3-284
Cow position: chr5:53855222-53855498 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 57, 78

Conread position: 3-285
Cow position: chr5:5080995-5081277 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-285
Cow position: chr5:17645373-17645097 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 3-285
Cow position: chr5:41520040-41519759 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 68, 97

Conread position: 3-287
Cow position: chr5:59874011-59873732 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 136

Conread position: 3-288
Cow position: chr5:1383511-1383800 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 80

Conread position: 3-288
Cow position: chr5:1394913-1394628 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 130

Conread position: 3-288
Cow position: chr5:1677373-1677089 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 3-288
Cow position: chr5:6124625-6124340 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-288
Cow position: chr5:7921874-7921581 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 18

Conread position: 3-288
Cow position: chr5:8421047-8420764 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 123, 64

Conread position: 3-288
Cow position: chr5:14551065-14550788 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 46

Conread position: 3-288
Cow position: chr5:14630395-14630110 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 243

Conread position: 3-288
Cow position: chr5:15362593-15362867 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 61, 166

Conread position: 3-288
Cow position: chr5:29599969-29600254 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 188
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 118, 11

Conread position: 3-288
Cow position: chr5:29680601-29680876 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 138

Conread position: 3-288
Cow position: chr5:31119659-31119374 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-288
Cow position: chr5:33565449-33565739 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 192
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 200

Conread position: 3-288
Cow position: chr5:39363410-39363690 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 64

Conread position: 3-288
Cow position: chr5:41067537-41067821 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 96

Conread position: 3-288
Cow position: chr5:41392259-41392543 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 59, 25

Conread position: 3-288
Cow position: chr5:41410901-41410622 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 3-288
Cow position: chr5:42673607-42673889 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 0

Conread position: 3-288
Cow position: chr5:46653409-46653701 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 99, 20

Conread position: 3-288
Cow position: chr5:48828659-48828946 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 32

Conread position: 3-288
Cow position: chr5:56442795-56443075 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-288
Cow position: chr5:57584530-57584828 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 288

Conread position: 3-288
Cow position: chr5:58460892-58460607 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-288
Cow position: chr5:63647954-63647669 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 139

Conread position: 3-288
Cow position: chr5:65312488-65312770 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 3-289
Cow position: chr5:4166185-4166469 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 3-290
Cow position: chr5:7192958-7193232 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 3-290
Cow position: chr5:41334121-41334401 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 200
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 121, 45

Conread position: 3-290
Cow position: chr5:69466614-69466900 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 0

Conread position: 3-291
Cow position: chr5:825746-826034 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-291
Cow position: chr5:10417810-10417522 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-291
Cow position: chr5:54951579-54951292 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 3-296
Cow position: chr5:55233256-55232973 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 202

Conread position: 3-301
Cow position: chr5:40532127-40531824 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 140

Conread position: 3-319
Cow position: chr5:27179172-27179483 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 107

Conread position: 3-319
Cow position: chr5:31145263-31144948 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 112

Conread position: 3-321
Cow position: chr5:34464070-34463755 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 27

Conread position: 3-323
Cow position: chr5:38831477-38831161 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 156

Conread position: 3-323
Cow position: chr5:40058091-40058409 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 0

Conread position: 3-323
Cow position: chr5:66971912-66972235 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 296

Conread position: 3-324
Cow position: chr5:360428-360113 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 50

Conread position: 3-324
Cow position: chr5:407979-408299 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-324
Cow position: chr5:1105347-1105037 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 82

Conread position: 3-324
Cow position: chr5:16206629-16206310 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 260

Conread position: 3-324
Cow position: chr5:23912416-23912723 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 9

Conread position: 3-324
Cow position: chr5:28247690-28248010 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 136

Conread position: 3-324
Cow position: chr5:31634963-31635284 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 11

Conread position: 3-324
Cow position: chr5:57879405-57879726 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 124

Conread position: 3-324
Cow position: chr5:69520144-69520449 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 223
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 139, 44

Conread position: 3-324
Cow position: chr5:74644147-74643828 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 180

Conread position: 3-332
Cow position: chr5:19780495-19780167 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 233

Conread position: 3-335
Cow position: chr5:33077483-33077815 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-341
Cow position: chr5:64615525-64615869 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 238
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 54, 59

Conread position: 3-343
Cow position: chr5:72046131-72045788 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 133

Conread position: 3-345
Cow position: chr5:37377382-37377730 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 74

Conread position: 3-345
Cow position: chr5:54876151-54875824 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 246
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 307, 133

Conread position: 3-345
Cow position: chr5:75756131-75756479 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 93

Conread position: 3-346
Cow position: chr5:27899612-27899257 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 229
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 111, 23

Conread position: 3-346
Cow position: chr5:40711943-40711587 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 241
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 74, 135

Conread position: 3-346
Cow position: chr5:42918703-42918349 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 231
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 37

Conread position: 3-346
Cow position: chr5:45846179-45845840 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 141

Conread position: 3-346
Cow position: chr5:46295159-46294811 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 298

Conread position: 3-346
Cow position: chr5:48574265-48573905 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 247
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 131, 94

Conread position: 3-346
Cow position: chr5:66982996-66983339 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 223
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 124, 113

Conread position: 3-346
Cow position: chr5:68082448-68082111 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 239
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 113, 45

Conread position: 3-347
Cow position: chr5:37288720-37289066 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 135

Conread position: 3-347
Cow position: chr5:66366047-66366387 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 110

Conread position: 3-348
Cow position: chr5:4041675-4042020 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr5:4962849-4962509 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 59

Conread position: 3-348
Cow position: chr5:5814562-5814217 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr5:6735251-6734906 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr5:9165120-9164773 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 135

Conread position: 3-348
Cow position: chr5:10514657-10515004 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 134

Conread position: 3-348
Cow position: chr5:11631447-11631102 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 130

Conread position: 3-348
Cow position: chr5:12134131-12134464 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 39

Conread position: 3-348
Cow position: chr5:12315834-12316172 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 60

Conread position: 3-348
Cow position: chr5:13807224-13806880 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr5:15478622-15478971 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 174

Conread position: 3-348
Cow position: chr5:15677594-15677943 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 134

Conread position: 3-348
Cow position: chr5:24348637-24348969 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 62

Conread position: 3-348
Cow position: chr5:26075155-26074811 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 103

Conread position: 3-348
Cow position: chr5:28330810-28330474 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 85

Conread position: 3-348
Cow position: chr5:35543197-35543542 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr5:39299040-39299385 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 278

Conread position: 3-348
Cow position: chr5:39448021-39447673 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 112

Conread position: 3-348
Cow position: chr5:44276133-44276479 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 132

Conread position: 3-348
Cow position: chr5:46023668-46023321 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 64

Conread position: 3-348
Cow position: chr5:46080746-46080399 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 64

Conread position: 3-348
Cow position: chr5:46104434-46104078 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 51

Conread position: 3-348
Cow position: chr5:46130270-46129923 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 64

Conread position: 3-348
Cow position: chr5:49103362-49103708 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 134

Conread position: 3-348
Cow position: chr5:54714229-54713879 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 301

Conread position: 3-348
Cow position: chr5:56467219-56467562 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 30

Conread position: 3-348
Cow position: chr5:59082679-59082338 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 0

Conread position: 3-348
Cow position: chr5:64524368-64524023 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 234

Conread position: 3-348
Cow position: chr5:68273311-68272966 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-349
Cow position: chr5:6584990-6584646 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 112

Conread position: 3-349
Cow position: chr5:14904543-14904215 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 0

Conread position: 3-356
Cow position: chr5:10772292-10771939 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 297

Conread position: 3-366
Cow position: chr5:55942884-55942522 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 124

Conread position: 3-368
Cow position: chr5:27461532-27461167 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-369
Cow position: chr5:4753596-4753230 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-369
Cow position: chr5:6455125-6454761 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 112

Conread position: 3-369
Cow position: chr5:45025629-45025257 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 20

Conread position: 3-369
Cow position: chr5:46816566-46816208 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 3-369
Cow position: chr5:66257161-66257520 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 3-369
Cow position: chr5:68377129-68377495 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:442771-442410 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 33

Conread position: 3-370
Cow position: chr5:709614-709248 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 134

Conread position: 3-370
Cow position: chr5:1059029-1058661 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:2330942-2330578 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 64

Conread position: 3-370
Cow position: chr5:3229225-3228858 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr5:4600215-4599852 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 3-370
Cow position: chr5:5106760-5107128 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 134

Conread position: 3-370
Cow position: chr5:6060094-6059727 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:6616080-6616447 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:6694468-6694101 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:9001825-9001467 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 116

Conread position: 3-370
Cow position: chr5:9056446-9056079 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:10250735-10250368 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:10260887-10260525 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 74

Conread position: 3-370
Cow position: chr5:10283659-10284026 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:10299885-10300252 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:10479106-10478739 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 134

Conread position: 3-370
Cow position: chr5:11639052-11639400 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 254
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 304, 64

Conread position: 3-370
Cow position: chr5:11780330-11779963 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr5:11986646-11986279 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr5:11988944-11988577 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:12325037-12324669 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 134

Conread position: 3-370
Cow position: chr5:13453704-13453337 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:18072378-18072012 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:19283965-19283605 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-370
Cow position: chr5:19890603-19890970 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:20107494-20107129 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:23881793-23881426 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:24086164-24085801 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:24633612-24633979 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:26053269-26053636 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:27046445-27046812 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr5:28013395-28013762 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:29223568-29223923 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:29255676-29255309 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr5:29633446-29633079 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:30259193-30258826 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:30347444-30347081 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 251
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 98, 209

Conread position: 3-370
Cow position: chr5:31285395-31285762 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 133

Conread position: 3-370
Cow position: chr5:31709829-31710197 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 135

Conread position: 3-370
Cow position: chr5:33870305-33869938 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:35498045-35498412 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr5:36369454-36369087 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:37380622-37380990 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 134

Conread position: 3-370
Cow position: chr5:37430978-37430611 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:37609471-37609104 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:37626384-37626751 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:37782597-37782234 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:38663259-38663623 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 134

Conread position: 3-370
Cow position: chr5:40116240-40115873 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:41586812-41587179 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:42283701-42284068 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:43031401-43031041 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 3-370
Cow position: chr5:43395830-43396197 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:45179311-45178944 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:46587527-46587160 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:46628217-46628584 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:46667609-46667970 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 64

Conread position: 3-370
Cow position: chr5:46780048-46780415 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:46845535-46845168 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:47055411-47055044 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:47564779-47564412 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:47590057-47589691 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:48374201-48374568 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:49239770-49240137 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:49970440-49970073 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:50622708-50622341 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 124

Conread position: 3-370
Cow position: chr5:51165773-51165406 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:51746756-51747121 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 112

Conread position: 3-370
Cow position: chr5:52239729-52239362 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:52822671-52822304 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:53075332-53074967 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:54927388-54927022 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 3-370
Cow position: chr5:54929716-54929354 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 3-370
Cow position: chr5:55723067-55723433 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:56271598-56271231 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:56931353-56930983 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 278

Conread position: 3-370
Cow position: chr5:57335826-57335459 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:57987030-57987383 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 3-370
Cow position: chr5:58202071-58202437 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 64

Conread position: 3-370
Cow position: chr5:58322195-58321823 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 64

Conread position: 3-370
Cow position: chr5:58323706-58324073 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:59064981-59065349 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:59147145-59147511 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 3-370
Cow position: chr5:59518478-59518111 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:60376702-60376342 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr5:60897332-60896965 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 134

Conread position: 3-370
Cow position: chr5:64061865-64062232 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr5:72857414-72857782 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 3-370
Cow position: chr5:75754586-75754218 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 3-372
Cow position: chr5:15530345-15529977 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 0

Conread position: 3-372
Cow position: chr5:21188469-21188834 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 174

Conread position: 3-373
Cow position: chr5:2977325-2977714 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 315

Conread position: 3-373
Cow position: chr5:5924445-5924075 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-373
Cow position: chr5:18118437-18118068 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-373
Cow position: chr5:41547484-41547126 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 3-373
Cow position: chr5:49220959-49220589 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 130

Conread position: 3-374
Cow position: chr5:3281355-3280988 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 156

Conread position: 3-374
Cow position: chr5:21943890-21944266 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 3-374
Cow position: chr5:51309481-51309851 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-374
Cow position: chr5:62436657-62437032 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 281

Conread position: 3-377
Cow position: chr5:38439369-38439743 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-380
Cow position: chr5:58900506-58900129 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-381
Cow position: chr5:34682825-34682449 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-381
Cow position: chr5:41331874-41332252 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-388
Cow position: chr5:18573683-18574064 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 291

Conread position: 3-391
Cow position: chr5:15363407-15363791 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 81

Conread position: 3-391
Cow position: chr5:27010803-27011194 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 19

Conread position: 3-391
Cow position: chr5:29634967-29635355 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-391
Cow position: chr5:29893500-29893888 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-394
Cow position: chr5:7385656-7386047 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 253
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 63, 201

Conread position: 3-399
Cow position: chr5:42671496-42671132 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 275
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 68, 131

Conread position: 3-453
Cow position: chr5:29904008-29903558 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 29

Conread position: 3-456
Cow position: chr5:69099018-69099495 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 307
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 102, 295

Conread position: 3-459
Cow position: chr5:2333019-2332544 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 111

Conread position: 3-459
Cow position: chr5:30276215-30276663 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 116

Conread position: 3-459
Cow position: chr5:44054520-44054069 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 27

Conread position: 3-460
Cow position: chr5:4218396-4218838 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 153

Conread position: 3-460
Cow position: chr5:64321268-64321719 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 49

Conread position: 3-467
Cow position: chr5:49820655-49821119 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 64

Conread position: 3-468
Cow position: chr5:18702689-18702231 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 130

Conread position: 3-473
Cow position: chr5:27015206-27015664 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 408, 189

Conread position: 3-476
Cow position: chr5:4710621-4710161 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 304
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 189, 72

Conread position: 3-477
Cow position: chr5:27154537-27155011 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 74

Conread position: 3-477
Cow position: chr5:31470062-31469595 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 192

Conread position: 3-479
Cow position: chr5:37942273-37941804 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 29

Conread position: 3-480
Cow position: chr5:19470664-19470200 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 386, 99

Conread position: 3-480
Cow position: chr5:21616981-21617446 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 41

Conread position: 3-480
Cow position: chr5:29827566-29828039 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 296

Conread position: 3-480
Cow position: chr5:37645579-37646062 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 45

Conread position: 3-480
Cow position: chr5:54405382-54404901 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 252

Conread position: 3-483
Cow position: chr5:26378155-26377677 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 236

Conread position: 3-483
Cow position: chr5:43923636-43923165 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 289

Conread position: 3-483
Cow position: chr5:65933417-65932935 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 43

Conread position: 3-489
Cow position: chr5:62827241-62826753 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 155

Conread position: 3-490
Cow position: chr5:30816226-30816719 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 295

Conread position: 3-490
Cow position: chr5:35207774-35208264 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 248

Conread position: 3-491
Cow position: chr5:23141064-23140579 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 142

Conread position: 3-492
Cow position: chr5:16508599-16509098 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 155

Conread position: 3-492
Cow position: chr5:34528091-34528555 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 64

Conread position: 3-492
Cow position: chr5:47871532-47871040 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 119

Conread position: 3-494
Cow position: chr5:42667878-42667382 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 98

Conread position: 3-495
Cow position: chr5:47704622-47704123 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 136

Conread position: 3-496
Cow position: chr5:57935589-57935104 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 48

Conread position: 3-497
Cow position: chr5:26094645-26094161 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 38

Conread position: 3-499
Cow position: chr5:55756926-55756417 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 134

Conread position: 3-510
Cow position: chr5:26467135-26467640 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 246

Conread position: 3-521
Cow position: chr5:25231495-25230981 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 202

Conread position: 4-212
Cow position: chr5:53775996-53776204 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 4-219
Cow position: chr5:45192375-45192153 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 4-219
Cow position: chr5:47719023-47719247 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 102, 63

Conread position: 4-225
Cow position: chr5:7140570-7140348 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 36, 66

Conread position: 4-243
Cow position: chr5:70249665-70249908 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 130, 79

Conread position: 4-248
Cow position: chr5:73089233-73088989 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 39, 138

Conread position: 4-254
Cow position: chr5:72007362-72007112 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-259
Cow position: chr5:28854389-28854138 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 112, 53

Conread position: 4-269
Cow position: chr5:7042202-7041938 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 63

Conread position: 4-275
Cow position: chr5:60769329-60769047 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 186
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 120, 38

Conread position: 4-280
Cow position: chr5:29660855-29660581 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 56, 52

Conread position: 4-284
Cow position: chr5:29843821-29844104 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 44

Conread position: 4-286
Cow position: chr5:67462494-67462769 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 4-288
Cow position: chr5:31097288-31097006 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 112

Conread position: 4-318
Cow position: chr5:41976323-41976017 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 22

Conread position: 4-325
Cow position: chr5:21592697-21593010 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 212
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 286, 122

Conread position: 4-344
Cow position: chr5:21137759-21137409 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 241
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 121, 311

Conread position: 4-345
Cow position: chr5:27100789-27101138 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 308

Conread position: 4-345
Cow position: chr5:41523271-41522941 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 48

Conread position: 4-346
Cow position: chr5:19419636-19419286 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 239
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 39, 212

Conread position: 4-346
Cow position: chr5:26376077-26376425 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 237
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 141, 119

Conread position: 4-348
Cow position: chr5:17384586-17384243 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 63

Conread position: 4-348
Cow position: chr5:66816066-66815719 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 93

Conread position: 4-349
Cow position: chr5:37758303-37757945 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 249
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 89, 197

Conread position: 4-369
Cow position: chr5:30302412-30302774 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 276

Conread position: 4-491
Cow position: chr5:52165665-52165177 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 411, 231

Conread position: 4-492
Cow position: chr5:9090491-9090020 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 129

Conread position: 5-132
Cow position: chr5:35180773-35180900 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 5-134
Cow position: chr5:6151292-6151163 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-143
Cow position: chr5:3551183-3551049 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 5-173
Cow position: chr5:66112631-66112454 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 5-175
Cow position: chr5:43962991-43962827 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 5-189
Cow position: chr5:52638580-52638388 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 59, 133

Conread position: 5-201
Cow position: chr5:39216795-39216991 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 141, 131

Conread position: 5-201
Cow position: chr5:59268959-59269156 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 61, 0

Conread position: 5-204
Cow position: chr5:73485348-73485150 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 62, 0

Conread position: 5-207
Cow position: chr5:32394127-32394329 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 159
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 5-209
Cow position: chr5:50264045-50263847 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 182, 96

Conread position: 5-210
Cow position: chr5:72309742-72309948 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 69, 16

Conread position: 5-218
Cow position: chr5:23179579-23179791 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 129, 81

Conread position: 5-219
Cow position: chr5:13702641-13702856 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 136, 60

Conread position: 5-219
Cow position: chr5:61361631-61361412 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 124, 67

Conread position: 5-231
Cow position: chr5:57783194-57783422 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 119, 103

Conread position: 5-249
Cow position: chr5:9071285-9071045 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 5-253
Cow position: chr5:22555561-22555809 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 74, 82

Conread position: 5-253
Cow position: chr5:23745264-23745018 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 5-254
Cow position: chr5:7277427-7277675 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 5-254
Cow position: chr5:7721770-7722033 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 122, 0

Conread position: 5-255
Cow position: chr5:48542782-48542535 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 215, 41

Conread position: 5-255
Cow position: chr5:54556714-54556970 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 78, 90

Conread position: 5-259
Cow position: chr5:32815391-32815650 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 43, 108

Conread position: 5-266
Cow position: chr5:63205528-63205265 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 123, 183

Conread position: 5-267
Cow position: chr5:71064094-71064359 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 9

Conread position: 5-268
Cow position: chr5:40896589-40896332 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 126, 86

Conread position: 5-269
Cow position: chr5:5812569-5812308 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 0

Conread position: 5-269
Cow position: chr5:32754895-32754633 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 5-275
Cow position: chr5:36867786-36868061 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 5-283
Cow position: chr5:9676092-9675801 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 131, 232

Conread position: 5-284
Cow position: chr5:65037205-65036919 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 52, 43

Conread position: 5-288
Cow position: chr5:5193926-5194213 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 61, 259

Conread position: 5-288
Cow position: chr5:22851901-22851613 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 192
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 66, 43

Conread position: 5-288
Cow position: chr5:23354250-23354533 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 233

Conread position: 5-288
Cow position: chr5:24087510-24087236 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 5-288
Cow position: chr5:25926897-25926613 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 0

Conread position: 5-288
Cow position: chr5:27548974-27548696 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 229

Conread position: 5-288
Cow position: chr5:31730710-31730984 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 5-288
Cow position: chr5:39334043-39333760 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 62

Conread position: 5-288
Cow position: chr5:45999508-45999223 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 5-288
Cow position: chr5:48765162-48765428 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 60

Conread position: 5-288
Cow position: chr5:54868933-54869215 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 43

Conread position: 5-288
Cow position: chr5:58796127-58795843 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 5-289
Cow position: chr5:12640714-12640431 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 0

Conread position: 5-289
Cow position: chr5:37736201-37736484 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 5-291
Cow position: chr5:61055114-61054829 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 5-324
Cow position: chr5:5937839-5938158 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-324
Cow position: chr5:10853295-10852980 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 5-324
Cow position: chr5:14636039-14635721 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 0

Conread position: 5-324
Cow position: chr5:30582865-30583185 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 89

Conread position: 5-324
Cow position: chr5:34506411-34506092 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 297

Conread position: 5-324
Cow position: chr5:35762806-35763124 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 72

Conread position: 5-324
Cow position: chr5:44848499-44848183 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 179

Conread position: 5-328
Cow position: chr5:60714658-60714339 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 217
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 38

Conread position: 5-345
Cow position: chr5:18276007-18276333 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 236
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 125, 52

Conread position: 5-346
Cow position: chr5:25226152-25225793 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 242
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 120, 0

Conread position: 5-346
Cow position: chr5:37715079-37714738 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 225
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 121, 156

Conread position: 5-348
Cow position: chr5:1338384-1338045 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 0

Conread position: 5-348
Cow position: chr5:2428208-2427869 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 5-348
Cow position: chr5:7498445-7498102 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-348
Cow position: chr5:8178697-8179036 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 0

Conread position: 5-348
Cow position: chr5:21189757-21190100 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-348
Cow position: chr5:35826116-35826448 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 25

Conread position: 5-348
Cow position: chr5:43984623-43984965 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 5-348
Cow position: chr5:46732820-46732479 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 5-348
Cow position: chr5:49116813-49116478 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 5-348
Cow position: chr5:49522241-49522586 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 5-348
Cow position: chr5:64778466-64778123 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-348
Cow position: chr5:73069966-73070305 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 39

Conread position: 5-349
Cow position: chr5:18557878-18557534 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 341

Conread position: 5-349
Cow position: chr5:45705546-45705906 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 307

Conread position: 5-367
Cow position: chr5:9074218-9073857 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 62

Conread position: 5-370
Cow position: chr5:13127988-13127623 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 131

Conread position: 5-373
Cow position: chr5:37586528-37586159 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-373
Cow position: chr5:43437404-43437034 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 180

Conread position: 5-373
Cow position: chr5:46235293-46234923 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 62

Conread position: 5-373
Cow position: chr5:52289296-52289656 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 188

Conread position: 5-374
Cow position: chr5:694090-694466 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 260
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 48, 287

Conread position: 5-374
Cow position: chr5:19978369-19978002 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 5-374
Cow position: chr5:46708698-46709064 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 54

Conread position: 5-374
Cow position: chr5:62427780-62428149 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-378
Cow position: chr5:36724204-36723831 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-381
Cow position: chr5:411180-410804 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 39

Conread position: 5-381
Cow position: chr5:2917995-2918370 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 131

Conread position: 5-381
Cow position: chr5:3500592-3500207 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 0

Conread position: 5-381
Cow position: chr5:29969148-29969524 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-381
Cow position: chr5:58770332-58769959 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 5-381
Cow position: chr5:70593463-70593088 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 76

Conread position: 5-386
Cow position: chr5:47343414-47343795 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-388
Cow position: chr5:11955978-11955587 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 270
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 123, 81

Conread position: 5-388
Cow position: chr5:42096130-42096525 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 269
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 68, 219

Conread position: 5-388
Cow position: chr5:72172542-72172921 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 261
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 62, 257

Conread position: 5-391
Cow position: chr5:58004760-58005144 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 0

Conread position: 5-425
Cow position: chr5:53005719-53005300 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 5-435
Cow position: chr5:17387080-17386646 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 296

Conread position: 5-459
Cow position: chr5:53184964-53184504 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 280

Conread position: 5-467
Cow position: chr5:3544835-3545300 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 391, 0

Conread position: 5-467
Cow position: chr5:18287182-18287647 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 179

Conread position: 5-467
Cow position: chr5:26505888-26505424 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 224

Conread position: 5-467
Cow position: chr5:34709307-34709774 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 288

Conread position: 5-467
Cow position: chr5:47560020-47559559 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 378, 16

Conread position: 5-467
Cow position: chr5:47750465-47750929 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 230

Conread position: 5-476
Cow position: chr5:6044801-6045277 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 295

Conread position: 5-478
Cow position: chr5:7397061-7397534 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 345

Conread position: 5-483
Cow position: chr5:16894254-16893780 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 241

Conread position: 5-483
Cow position: chr5:51151846-51151364 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 90

Conread position: 5-492
Cow position: chr5:7175838-7176327 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 335

Conread position: 5-496
Cow position: chr5:37190573-37190093 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 104

Conread position: 6-153
Cow position: chr5:11230336-11230193 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 6-224
Cow position: chr5:40890045-40889827 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-233
Cow position: chr5:6901232-6900999 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 132, 0

Conread position: 6-243
Cow position: chr5:63457033-63456796 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 72

Conread position: 6-244
Cow position: chr5:8821471-8821239 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 133, 0

Conread position: 6-246
Cow position: chr5:55194970-55195212 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 181
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 143, 130

Conread position: 6-247
Cow position: chr5:40928489-40928246 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 119, 19

Conread position: 6-249
Cow position: chr5:40891986-40891741 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 119, 169

Conread position: 6-255
Cow position: chr5:33537246-33537488 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 69

Conread position: 6-260
Cow position: chr5:38379691-38379948 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 122, 182

Conread position: 6-268
Cow position: chr5:29750644-29750909 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 120, 199

Conread position: 6-269
Cow position: chr5:51858769-51858500 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 67, 56

Conread position: 6-279
Cow position: chr5:31645771-31646043 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 70

Conread position: 6-288
Cow position: chr5:3789764-3790046 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-288
Cow position: chr5:35988832-35989113 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 0

Conread position: 6-288
Cow position: chr5:50645937-50645654 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 6-292
Cow position: chr5:60967964-60968245 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 8, 82

Conread position: 6-324
Cow position: chr5:60447763-60448079 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 114

Conread position: 6-324
Cow position: chr5:70960631-70960314 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 22

Conread position: 6-328
Cow position: chr5:26402297-26401976 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 7, 30

Conread position: 6-333
Cow position: chr5:70771669-70772002 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 220
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 121, 157

Conread position: 6-335
Cow position: chr5:4071388-4071718 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 130

Conread position: 6-341
Cow position: chr5:51951865-51952208 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 238
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 36, 63

Conread position: 6-345
Cow position: chr5:29432068-29431736 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 228
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 122, 41

Conread position: 6-345
Cow position: chr5:34678411-34678740 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 106

Conread position: 6-346
Cow position: chr5:47854031-47854360 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 228
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 123, 22

Conread position: 6-347
Cow position: chr5:25940374-25940034 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 224
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 119, 46

Conread position: 6-348
Cow position: chr5:34638409-34638743 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 221

Conread position: 6-348
Cow position: chr5:48535332-48535666 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 244
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 54, 45

Conread position: 6-348
Cow position: chr5:59877222-59876881 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 0

Conread position: 6-373
Cow position: chr5:41532673-41532287 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 263
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 71, 192

Conread position: 6-483
Cow position: chr5:35209940-35209483 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 318
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 15, 63

Conread position: 7-125
Cow position: chr5:34559676-34559794 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-205
Cow position: chr5:9390260-9390062 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 157
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 150, 80

Conread position: 7-212
Cow position: chr5:4348170-4347967 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 76, 0

Conread position: 7-219
Cow position: chr5:32307699-32307487 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 128, 80

Conread position: 7-222
Cow position: chr5:12352549-12352332 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 7-241
Cow position: chr5:24837524-24837289 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 42, 62

Conread position: 7-249
Cow position: chr5:27615013-27615261 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 109, 29

Conread position: 7-249
Cow position: chr5:56433110-56433346 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 119, 0

Conread position: 7-255
Cow position: chr5:32140562-32140313 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 111, 47

Conread position: 7-283
Cow position: chr5:54089226-54089512 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 118, 79

Conread position: 7-288
Cow position: chr5:63828171-63827883 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 133, 109

Conread position: 7-324
Cow position: chr5:41951563-41951251 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 7-345
Cow position: chr5:33087734-33088079 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 237
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 69, 56

Conread position: 7-346
Cow position: chr5:26058661-26058988 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 221
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 125, 25

Conread position: 7-346
Cow position: chr5:53764228-53763901 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 233
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 119, 211

Conread position: 7-347
Cow position: chr5:48972103-48972448 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 298

Conread position: 7-370
Cow position: chr5:351316-350952 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 130

Conread position: 7-370
Cow position: chr5:70102288-70101929 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 83

Conread position: 7-386
Cow position: chr5:29742016-29741640 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 0

Conread position: 7-388
Cow position: chr5:27690549-27690163 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 259
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 119, 158

Conread position: 7-467
Cow position: chr5:55631606-55632071 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 292

Conread position: 7-467
Cow position: chr5:58245873-58246336 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 274

Conread position: 7-467
Cow position: chr5:59339335-59339800 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 128

Conread position: 7-488
Cow position: chr5:16184609-16185085 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 228

Conread position: 8-145
Cow position: chr5:15376348-15376485 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 8-165
Cow position: chr5:59595-59438 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 8-209
Cow position: chr5:31217632-31217828 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 20, 0

Conread position: 8-218
Cow position: chr5:32152427-32152209 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 134, 59

Conread position: 8-218
Cow position: chr5:54623156-54623372 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 206

Conread position: 8-219
Cow position: chr5:43004292-43004508 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 121, 111

Conread position: 8-228
Cow position: chr5:10096314-10096090 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 126, 59

Conread position: 8-233
Cow position: chr5:4040577-4040338 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 117, 0

Conread position: 8-240
Cow position: chr5:50443151-50442917 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 137, 0

Conread position: 8-255
Cow position: chr5:13045260-13045007 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 64, 34

Conread position: 8-255
Cow position: chr5:52830965-52831213 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 8-268
Cow position: chr5:29771039-29771296 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 8-284
Cow position: chr5:5662956-5662674 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 86

Conread position: 8-295
Cow position: chr5:6197341-6197067 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 79, 36

Conread position: 8-324
Cow position: chr5:59303764-59303435 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 58, 165

Conread position: 8-327
Cow position: chr5:25928169-25927855 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 221
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 125, 31

Conread position: 8-343
Cow position: chr5:27689628-27689290 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 229
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 117, 22

Conread position: 8-346
Cow position: chr5:65593391-65593735 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 273

Conread position: 8-348
Cow position: chr5:26101262-26101602 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 8-349
Cow position: chr5:32378389-32378727 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 233
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 122, 45

Conread position: 8-374
Cow position: chr5:279637-279271 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 128

Conread position: 9-370
Cow position: chr5:16085286-16084920 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 224

Conread position: 9-373
Cow position: chr5:2262852-2262491 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 121

Conread position: 9-374
Cow position: chr5:15112711-15112346 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-522
Cow position: chr5:10261724-10261206 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 281

Conread position: 10-213
Cow position: chr5:9234871-9234663 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 124, 42

Conread position: 10-233
Cow position: chr5:64759211-64758993 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 61, 136

Conread position: 10-259
Cow position: chr5:15455359-15455611 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 70, 153

Conread position: 10-259
Cow position: chr5:42727271-42727024 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 10-269
Cow position: chr5:38883144-38882893 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 136, 126

Conread position: 10-324
Cow position: chr5:10109407-10109712 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 124, 79

Conread position: 10-345
Cow position: chr5:14538186-14537846 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 115, 206

Conread position: 10-346
Cow position: chr5:44660141-44660487 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 116, 149

Conread position: 10-348
Cow position: chr5:53381099-53381436 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 10-356
Cow position: chr5:26096816-26097161 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 57

Conread position: 10-496
Cow position: chr5:28223982-28224457 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 58

Conread position: 11-178
Cow position: chr5:57113121-57113298 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 11-249
Cow position: chr5:41557248-41557013 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 160
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 80, 56

Conread position: 11-285
Cow position: chr5:28930902-28931168 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 11-288
Cow position: chr5:42232189-42231909 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 184
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 115, 145

Conread position: 11-288
Cow position: chr5:51683722-51683447 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 223

Conread position: 11-324
Cow position: chr5:26335603-26335280 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 221
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 106, 42

Conread position: 11-324
Cow position: chr5:54126604-54126913 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 158

Conread position: 11-346
Cow position: chr5:57613535-57613200 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 65, 78

Conread position: 11-348
Cow position: chr5:34480449-34480112 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 125

Conread position: 11-369
Cow position: chr5:3066122-3065764 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 125

Conread position: 11-498
Cow position: chr5:64844598-64844121 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 283

Conread position: 12-233
Cow position: chr5:29755822-29756052 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 103, 0

Conread position: 12-284
Cow position: chr5:31560775-31561048 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 133, 164

Conread position: 12-373
Cow position: chr5:72314932-72314573 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 125

Conread position: 12-384
Cow position: chr5:51293214-51292839 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 14

Conread position: 12-480
Cow position: chr5:58855627-58856094 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 59

Conread position: 13-225
Cow position: chr5:57949753-57949534 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 13-255
Cow position: chr5:35684232-35684462 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 13-359
Cow position: chr5:24925358-24925700 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 228
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 277, 111

Conread position: 13-381
Cow position: chr5:54337446-54337814 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 14-289
Cow position: chr5:59505884-59505605 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 30, 39

Conread position: 14-346
Cow position: chr5:18002648-18002316 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 225
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 126, 222

Conread position: 14-346
Cow position: chr5:40614488-40614151 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 231
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 14, 164

Conread position: 14-346
Cow position: chr5:57365549-57365219 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 234
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 122, 227

Conread position: 14-370
Cow position: chr5:61763217-61762861 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 122

Conread position: 14-524
Cow position: chr5:6087041-6086523 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 40

Conread position: 15-270
Cow position: chr5:3242934-3242683 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 192
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 234, 41

Conread position: 15-370
Cow position: chr5:50981891-50982245 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 0

Conread position: 16-193
Cow position: chr5:61230882-61230702 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 109, 51

Conread position: 16-259
Cow position: chr5:16100057-16099806 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 60, 96

Conread position: 16-325
Cow position: chr5:65052635-65052335 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 100, 61

Conread position: 17-259
Cow position: chr5:17868977-17869215 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 227, 76

Conread position: 17-275
Cow position: chr5:32024194-32023935 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 126, 11

Conread position: 17-348
Cow position: chr5:7007252-7006921 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 119

Conread position: 17-348
Cow position: chr5:54679032-54678701 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 119

Conread position: 17-356
Cow position: chr5:12323268-12322935 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 219

Conread position: 17-370
Cow position: chr5:47959393-47959747 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 120

Conread position: 17-477
Cow position: chr5:67932942-67932480 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 60

Conread position: 19-205
Cow position: chr5:61576048-61576234 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 19-289
Cow position: chr5:70631447-70631177 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 109, 75

Conread position: 19-324
Cow position: chr5:41980930-41981235 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 137

Conread position: 19-388
Cow position: chr5:15882953-15882578 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 236

Conread position: 20-267
Cow position: chr5:5337673-5337426 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 20-283
Cow position: chr5:59779628-59779365 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 201

Conread position: 20-283
Cow position: chr5:59782229-59781966 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 201

Conread position: 20-288
Cow position: chr5:48787986-48787711 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 185
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 102, 167

Conread position: 20-346
Cow position: chr5:34583761-34583435 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 116

Conread position: 20-370
Cow position: chr5:4015224-4014875 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 116

Conread position: 20-381
Cow position: chr5:48804890-48804531 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 24

Conread position: 20-459
Cow position: chr5:55176416-55176856 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 244

Conread position: 21-288
Cow position: chr5:60669427-60669692 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 106, 29

Conread position: 21-347
Cow position: chr5:63608036-63607705 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 241

Conread position: 21-367
Cow position: chr5:50637369-50637706 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 60

Conread position: 22-193
Cow position: chr5:42044640-42044818 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 22-253
Cow position: chr5:29559863-29560100 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 103, 0

Conread position: 22-255
Cow position: chr5:27305801-27306035 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 103, 30

Conread position: 22-288
Cow position: chr5:70290016-70290283 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 22-346
Cow position: chr5:33270004-33270328 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 233
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 50, 158

Conread position: 22-391
Cow position: chr5:48407054-48406664 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 260
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 103, 0

Conread position: 23-256
Cow position: chr5:15472692-15472459 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 113

Conread position: 23-370
Cow position: chr5:13271071-13271418 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 113

Conread position: 23-483
Cow position: chr5:31480686-31481139 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 328

Conread position: 25-255
Cow position: chr5:59508859-59509092 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 113, 188

Conread position: 25-381
Cow position: chr5:51936696-51937046 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 0

Conread position: 26-275
Cow position: chr5:6129892-6130141 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 26-370
Cow position: chr5:15760831-15760485 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 10

Conread position: 26-458
Cow position: chr5:30486789-30487202 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 57

Conread position: 27-279
Cow position: chr5:15722758-15722506 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 27-388
Cow position: chr5:19969495-19969134 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 110

Conread position: 27-388
Cow position: chr5:67654842-67655215 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 239
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 22

Conread position: 27-468
Cow position: chr5:13909069-13908638 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 172

Conread position: 28-217
Cow position: chr5:52040772-52040583 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 28-269
Cow position: chr5:46339671-46339907 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 44, 61

Conread position: 29-288
Cow position: chr5:66288005-66288267 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 133, 90

Conread position: 29-348
Cow position: chr5:58441081-58441398 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 19

Conread position: 30-254
Cow position: chr5:56927311-56927542 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 99, 188

Conread position: 30-287
Cow position: chr5:74015483-74015737 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 30-289
Cow position: chr5:36762833-36762585 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 110

Conread position: 30-348
Cow position: chr5:35144883-35145210 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 32-219
Cow position: chr5:22856800-22856605 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 32-254
Cow position: chr5:7585008-7584781 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 108, 16

Conread position: 32-348
Cow position: chr5:27403698-27403385 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 202

Conread position: 32-348
Cow position: chr5:35455579-35455263 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 104

Conread position: 32-370
Cow position: chr5:42871384-42871722 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 104

Conread position: 32-388
Cow position: chr5:11954756-11954409 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 235
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 176

Conread position: 33-228
Cow position: chr5:40977569-40977767 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 21, 35

Conread position: 33-248
Cow position: chr5:6150450-6150236 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 9

Conread position: 34-255
Cow position: chr5:63174174-63173952 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 96, 178

Conread position: 34-370
Cow position: chr5:54360629-54360293 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 102

Conread position: 35-255
Cow position: chr5:45036324-45036546 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 89, 163

Conread position: 35-370
Cow position: chr5:446064-446399 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 101

Conread position: 35-501
Cow position: chr5:2500648-2500173 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 313
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 189, 270

Conread position: 36-228
Cow position: chr5:39419277-39419093 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 36-233
Cow position: chr5:53146296-53146094 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 91, 12

Conread position: 36-346
Cow position: chr5:70402621-70402936 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 215
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 23, 82

Conread position: 37-231
Cow position: chr5:49239345-49239155 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 107, 30

Conread position: 37-248
Cow position: chr5:16062263-16062057 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 67, 0

Conread position: 37-255
Cow position: chr5:38431611-38431827 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 184, 199

Conread position: 37-288
Cow position: chr5:47756312-47756566 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 37-337
Cow position: chr5:674953-675251 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 206
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 85, 30

Conread position: 37-460
Cow position: chr5:31686945-31687368 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 99

Conread position: 38-250
Cow position: chr5:60752545-60752328 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 12, 0

Conread position: 38-284
Cow position: chr5:9873807-9874056 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 39-342
Cow position: chr5:3058225-3058531 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 221
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 207, 80

Conread position: 42-192
Cow position: chr5:24299868-24300018 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 42-200
Cow position: chr5:36832548-36832394 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 50

Conread position: 42-275
Cow position: chr5:11645247-11645487 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 42-288
Cow position: chr5:12873301-12873542 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 31

Conread position: 42-328
Cow position: chr5:7740773-7740469 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 44, 269

Conread position: 42-335
Cow position: chr5:10516160-10516450 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 200
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 87, 35

Conread position: 42-346
Cow position: chr5:21184783-21184470 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 87, 6

Conread position: 42-346
Cow position: chr5:26561697-26562009 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 205, 83

Conread position: 42-348
Cow position: chr5:4716185-4715879 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 94

Conread position: 42-380
Cow position: chr5:48718377-48718714 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 53

Conread position: 42-391
Cow position: chr5:3204392-3204730 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 42-459
Cow position: chr5:47601363-47601785 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 240

Conread position: 42-477
Cow position: chr5:65776844-65776395 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 302
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 101, 22

Conread position: 42-483
Cow position: chr5:44752767-44752324 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 253

Conread position: 43-259
Cow position: chr5:57772079-57771862 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 19, 0

Conread position: 43-346
Cow position: chr5:18478977-18479287 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 209
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 83, 73

Conread position: 43-348
Cow position: chr5:17087468-17087171 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 40

Conread position: 44-255
Cow position: chr5:46797788-46797993 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 44-256
Cow position: chr5:33266102-33265886 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 99, 0

Conread position: 44-344
Cow position: chr5:48244635-48244936 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 196
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 83, 106

Conread position: 44-356
Cow position: chr5:19813667-19813349 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 192

Conread position: 44-474
Cow position: chr5:46510313-46509883 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 8

Conread position: 44-501
Cow position: chr5:15598679-15598225 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 166

Conread position: 45-355
Cow position: chr5:52610964-52610649 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 212
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 83, 100

Conread position: 45-357
Cow position: chr5:58551127-58551444 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 219
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 76, 41

Conread position: 46-346
Cow position: chr5:74234716-74234415 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 82, 137

Conread position: 47-322
Cow position: chr5:4353566-4353847 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 88, 256

Conread position: 48-254
Cow position: chr5:25935184-25935394 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 94, 193

Conread position: 48-256
Cow position: chr5:34885849-34885645 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 184, 0

Conread position: 48-261
Cow position: chr5:12672466-12672251 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 92, 29

Conread position: 48-287
Cow position: chr5:28456955-28456720 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 0

Conread position: 48-287
Cow position: chr5:28460257-28460022 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 0

Conread position: 48-348
Cow position: chr5:10482814-10482514 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 88

Conread position: 48-348
Cow position: chr5:59758952-59759243 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 72

Conread position: 48-370
Cow position: chr5:14542893-14542573 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 209

Conread position: 48-495
Cow position: chr5:50821347-50821787 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 29

Conread position: 48-510
Cow position: chr5:14314081-14314542 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 157

Conread position: 49-346
Cow position: chr5:41953253-41952951 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 211
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 87, 252

Conread position: 49-374
Cow position: chr5:14141248-14141571 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 50

Conread position: 49-391
Cow position: chr5:41936229-41935900 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 28

Conread position: 49-393
Cow position: chr5:60901016-60901358 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 235
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 77, 139

Conread position: 51-321
Cow position: chr5:25730050-25729770 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 81, 61

Conread position: 52-228
Cow position: chr5:40595464-40595291 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 77, 0

Conread position: 52-269
Cow position: chr5:24102290-24102507 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 57

Conread position: 52-270
Cow position: chr5:51999747-51999972 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 74, 36

Conread position: 52-284
Cow position: chr5:7581314-7581076 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 73, 152

Conread position: 52-285
Cow position: chr5:32809441-32809205 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 0

Conread position: 52-288
Cow position: chr5:49558724-49558957 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 75

Conread position: 52-324
Cow position: chr5:12557844-12557574 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 76, 9

Conread position: 52-324
Cow position: chr5:26790882-26790618 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 183

Conread position: 52-349
Cow position: chr5:76097902-76097606 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 89

Conread position: 52-373
Cow position: chr5:34612360-34612681 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 84

Conread position: 52-503
Cow position: chr5:26647279-26647734 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 91

Conread position: 53-199
Cow position: chr5:22311829-22311975 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 53-231
Cow position: chr5:69337377-69337554 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 156, 0

Conread position: 54-233
Cow position: chr5:39815706-39815541 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 55-255
Cow position: chr5:63635618-63635823 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 80, 107

Conread position: 56-213
Cow position: chr5:32240496-32240653 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 56-271
Cow position: chr5:38818925-38818710 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 90, 80

Conread position: 56-290
Cow position: chr5:66935794-66936032 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 159
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 61

Conread position: 56-370
Cow position: chr5:56879505-56879819 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 57-269
Cow position: chr5:48938104-48937892 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 14, 24

Conread position: 59-287
Cow position: chr5:24912057-24912290 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 41

Conread position: 59-288
Cow position: chr5:48007271-48007037 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 77, 227

Conread position: 59-288
Cow position: chr5:62143257-62143022 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 8

Conread position: 59-346
Cow position: chr5:40672946-40673238 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 216

Conread position: 59-366
Cow position: chr5:6528250-6528556 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 98

Conread position: 59-388
Cow position: chr5:64122487-64122142 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 124

Conread position: 59-391
Cow position: chr5:29504671-29505008 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 73, 29

Conread position: 63-388
Cow position: chr5:46334604-46334922 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 217
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 159

Conread position: 63-480
Cow position: chr5:61839759-61840182 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 232

Conread position: 64-228
Cow position: chr5:59473042-59473206 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 82, 72

Conread position: 64-275
Cow position: chr5:28323762-28323974 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 62, 175

Conread position: 64-288
Cow position: chr5:59135018-59135242 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 72

Conread position: 64-370
Cow position: chr5:59450364-59450057 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 72

Conread position: 65-285
Cow position: chr5:55068297-55068511 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 93, 0

Conread position: 65-348
Cow position: chr5:13328344-13328619 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 81, 71

Conread position: 67-270
Cow position: chr5:51070758-51070968 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 56

Conread position: 67-272
Cow position: chr5:1688580-1688369 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 67-284
Cow position: chr5:41604183-41604403 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 78, 184

Conread position: 67-288
Cow position: chr5:1054765-1054545 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 117, 0

Conread position: 67-288
Cow position: chr5:21550311-21550085 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 148

Conread position: 67-288
Cow position: chr5:58519823-58519601 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 67-346
Cow position: chr5:28946486-28946202 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 70, 11

Conread position: 67-347
Cow position: chr5:29675879-29676156 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 63, 101

Conread position: 67-348
Cow position: chr5:26133497-26133216 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 229

Conread position: 67-370
Cow position: chr5:8986348-8986049 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 220, 10

Conread position: 67-370
Cow position: chr5:11763411-11763714 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 69

Conread position: 67-370
Cow position: chr5:30274488-30274185 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 69

Conread position: 67-370
Cow position: chr5:42508043-42508346 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 69

Conread position: 67-370
Cow position: chr5:48227395-48227698 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 69

Conread position: 67-370
Cow position: chr5:55685139-55685442 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 69

Conread position: 67-370
Cow position: chr5:57002843-57002540 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 69

Conread position: 67-372
Cow position: chr5:74550045-74550350 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 232

Conread position: 67-386
Cow position: chr5:24614023-24614347 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 69

Conread position: 67-388
Cow position: chr5:52226669-52226348 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 69

Conread position: 67-483
Cow position: chr5:14420768-14420350 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 235

Conread position: 68-288
Cow position: chr5:19300198-19299982 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 54, 59

Conread position: 68-290
Cow position: chr5:30977948-30978186 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 190

Conread position: 69-287
Cow position: chr5:9385408-9385193 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 69-348
Cow position: chr5:36793609-36793894 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 172, 53

Conread position: 69-370
Cow position: chr5:23957202-23956902 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 171
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 177, 139

Conread position: 70-370
Cow position: chr5:1163616-1163903 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 76, 46

Conread position: 70-482
Cow position: chr5:33414825-33414417 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 235

Conread position: 70-510
Cow position: chr5:56523754-56524188 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 222

Conread position: 71-255
Cow position: chr5:68846959-68846776 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 90, 57

Conread position: 71-270
Cow position: chr5:34888282-34888077 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 68, 173

Conread position: 71-356
Cow position: chr5:765304-765588 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 99

Conread position: 72-223
Cow position: chr5:3627778-3627631 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 42

Conread position: 72-346
Cow position: chr5:62268160-62268441 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 56, 243

Conread position: 72-453
Cow position: chr5:47889133-47888749 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 230

Conread position: 73-214
Cow position: chr5:28016707-28016844 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 73-253
Cow position: chr5:15425829-15426009 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 112, 5

Conread position: 73-345
Cow position: chr5:65054044-65054326 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 189
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 55, 232

Conread position: 74-208
Cow position: chr5:63987884-63987753 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 74-228
Cow position: chr5:43930183-43930029 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 74-345
Cow position: chr5:58579448-58579173 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 48

Conread position: 74-477
Cow position: chr5:65887430-65887019 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 276
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 84, 63

Conread position: 76-288
Cow position: chr5:53002012-53001802 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 170
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 81, 160

Conread position: 76-477
Cow position: chr5:21524751-21525158 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 119

Conread position: 77-269
Cow position: chr5:3966923-3967116 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 158
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 69, 59

Conread position: 77-269
Cow position: chr5:9024694-9024504 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 156
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 83, 159

Conread position: 77-282
Cow position: chr5:19389391-19389601 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 59, 129

Conread position: 77-349
Cow position: chr5:30176594-30176320 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 216

Conread position: 77-370
Cow position: chr5:4434045-4433751 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 59

Conread position: 77-370
Cow position: chr5:19020631-19020340 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 77-370
Cow position: chr5:58329643-58329936 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 59

Conread position: 77-381
Cow position: chr5:20411051-20410747 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 78-267
Cow position: chr5:59451796-59451604 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 138

Conread position: 79-249
Cow position: chr5:5855377-5855547 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 79-256
Cow position: chr5:26595608-26595424 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 79-259
Cow position: chr5:57271848-57271662 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 79-279
Cow position: chr5:64841896-64841691 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 79-290
Cow position: chr5:28374754-28374540 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 46, 148

Conread position: 79-344
Cow position: chr5:27347095-27347363 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 180
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 74

Conread position: 79-348
Cow position: chr5:20270369-20270638 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 57

Conread position: 79-348
Cow position: chr5:24919288-24919019 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 223

Conread position: 79-370
Cow position: chr5:4571157-4571449 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 58

Conread position: 79-388
Cow position: chr5:24933777-24934104 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 151, 46

Conread position: 79-497
Cow position: chr5:39094142-39094562 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 93

Conread position: 80-288
Cow position: chr5:31053011-31053219 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 81-256
Cow position: chr5:10248313-10248482 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 93, 44

Conread position: 81-269
Cow position: chr5:33820919-33820731 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 151
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 81-370
Cow position: chr5:1690502-1690791 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 55

Conread position: 81-388
Cow position: chr5:51761586-51761273 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 210
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 12, 222

Conread position: 81-480
Cow position: chr5:4388944-4389342 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 199

Conread position: 82-370
Cow position: chr5:10838490-10838202 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 64, 54

Conread position: 82-370
Cow position: chr5:41370926-41371214 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 54

Conread position: 83-335
Cow position: chr5:17047991-17048243 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 53

Conread position: 83-348
Cow position: chr5:74162104-74161840 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 152, 0

Conread position: 83-370
Cow position: chr5:40864617-40864904 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 53

Conread position: 85-259
Cow position: chr5:1460854-1460681 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 85-288
Cow position: chr5:21040379-21040176 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 86, 158

Conread position: 85-288
Cow position: chr5:22071668-22071884 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 76, 0

Conread position: 86-225
Cow position: chr5:57889316-57889455 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 86-288
Cow position: chr5:59114502-59114705 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 169, 0

Conread position: 86-367
Cow position: chr5:14415368-14415648 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 65, 50

Conread position: 86-370
Cow position: chr5:49286864-49286583 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 47

Conread position: 87-185
Cow position: chr5:54753318-54753416 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 87-303
Cow position: chr5:44735432-44735204 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 222

Conread position: 87-349
Cow position: chr5:62172003-62172277 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 154, 0

Conread position: 87-370
Cow position: chr5:247925-248208 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 49

Conread position: 88-467
Cow position: chr5:10922782-10923161 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 96

Conread position: 91-348
Cow position: chr5:63306009-63305749 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 56, 48

Conread position: 92-232
Cow position: chr5:5879714-5879574 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 92-256
Cow position: chr5:33977268-33977432 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 46

Conread position: 92-267
Cow position: chr5:28335638-28335465 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 159, 27

Conread position: 92-288
Cow position: chr5:41531488-41531290 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 159
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 143, 0

Conread position: 92-290
Cow position: chr5:38838665-38838467 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 92-348
Cow position: chr5:30158024-30158280 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 92-348
Cow position: chr5:37801328-37801584 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 92-358
Cow position: chr5:42769396-42769130 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 92-368
Cow position: chr5:50979406-50979681 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 92-370
Cow position: chr5:1282202-1281934 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 54, 44

Conread position: 92-370
Cow position: chr5:2279149-2278871 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 167
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 92-372
Cow position: chr5:48799662-48799941 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 54, 23

Conread position: 92-374
Cow position: chr5:44369495-44369778 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 31, 77

Conread position: 92-459
Cow position: chr5:42777376-42777730 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 246
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 62, 144

Conread position: 92-459
Cow position: chr5:55428158-55428528 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 329

Conread position: 93-288
Cow position: chr5:70270564-70270760 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 134, 114

Conread position: 93-374
Cow position: chr5:63103512-63103795 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 206

Conread position: 93-391
Cow position: chr5:61030632-61030328 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 33, 208

Conread position: 94-370
Cow position: chr5:11129629-11129904 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 42

Conread position: 94-373
Cow position: chr5:50573361-50573639 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 141

Conread position: 94-379
Cow position: chr5:18404476-18404191 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 205

Conread position: 95-241
Cow position: chr5:32698789-32698646 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 95-259
Cow position: chr5:47629268-47629105 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 121, 0

Conread position: 95-341
Cow position: chr5:16116643-16116390 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 168
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 217

Conread position: 95-370
Cow position: chr5:58100081-58099808 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 95-483
Cow position: chr5:6986763-6987156 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 259
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 186, 203

Conread position: 96-288
Cow position: chr5:12161297-12161107 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 156
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 26, 0

Conread position: 96-288
Cow position: chr5:22737711-22737903 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 96-370
Cow position: chr5:55654341-55654615 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 40

Conread position: 98-255
Cow position: chr5:14557619-14557461 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 128
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 29, 0

Conread position: 98-274
Cow position: chr5:33792240-33792413 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 39, 0

Conread position: 98-324
Cow position: chr5:22565246-22565477 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 112

Conread position: 99-468
Cow position: chr5:50729108-50729472 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 133

Conread position: 99-483
Cow position: chr5:44583505-44583135 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 275
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 89

Conread position: 100-348
Cow position: chr5:44707962-44707714 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 36

Conread position: 101-348
Cow position: chr5:13691964-13691717 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 109

Conread position: 101-348
Cow position: chr5:33180526-33180764 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 88, 0

Conread position: 102-370
Cow position: chr5:26138808-26138540 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 44, 34

Conread position: 102-370
Cow position: chr5:39173575-39173307 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 44, 34

Conread position: 104-288
Cow position: chr5:31020500-31020316 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 148
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 105-349
Cow position: chr5:21005059-21004815 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 185, 234

Conread position: 105-384
Cow position: chr5:60210524-60210246 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 205, 164

Conread position: 106-370
Cow position: chr5:39368598-39368334 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 30

Conread position: 107-373
Cow position: chr5:44617019-44616753 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 107-480
Cow position: chr5:72564376-72564753 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 253
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 158, 109

Conread position: 108-288
Cow position: chr5:71846036-71846218 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 148
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 9, 0

Conread position: 108-290
Cow position: chr5:12149164-12149346 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 147
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 108-346
Cow position: chr5:39675831-39675591 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 17, 144

Conread position: 109-362
Cow position: chr5:9487668-9487410 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 34

Conread position: 109-391
Cow position: chr5:54310948-54311229 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 139, 49

Conread position: 110-249
Cow position: chr5:42744388-42744528 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 25

Conread position: 110-288
Cow position: chr5:55430254-55430432 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 16, 141

Conread position: 110-348
Cow position: chr5:22761937-22761699 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 36, 26

Conread position: 110-373
Cow position: chr5:62678278-62678540 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 200, 170

Conread position: 111-502
Cow position: chr5:40357269-40356857 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 268
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 203

Conread position: 112-374
Cow position: chr5:9099813-9099552 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 168, 0

Conread position: 113-330
Cow position: chr5:40423267-40423482 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 168, 122

Conread position: 114-488
Cow position: chr5:62107864-62107493 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 253
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 179, 18

Conread position: 115-285
Cow position: chr5:43457883-43457721 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 115-288
Cow position: chr5:5785814-5785641 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 115-288
Cow position: chr5:26403877-26403700 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 69, 7

Conread position: 115-288
Cow position: chr5:36679821-36679642 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 119, 0

Conread position: 115-348
Cow position: chr5:38852984-38853217 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 175, 181

Conread position: 116-290
Cow position: chr5:47317342-47317167 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 167, 0

Conread position: 116-349
Cow position: chr5:23856537-23856303 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 139, 187

Conread position: 119-228
Cow position: chr5:20127708-20127817 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 119-374
Cow position: chr5:12146322-12146577 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 119-492
Cow position: chr5:32141070-32140708 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 243
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 42, 108

Conread position: 120-324
Cow position: chr5:41486898-41487102 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 139
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 190, 179

Conread position: 120-479
Cow position: chr5:66064758-66065118 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 239
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 260, 246

Conread position: 122-288
Cow position: chr5:34482059-34481893 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 135
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 122-373
Cow position: chr5:73967800-73967549 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 168, 177

Conread position: 123-489
Cow position: chr5:63840511-63840148 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 247
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 187, 101

Conread position: 125-291
Cow position: chr5:25913397-25913564 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 125-306
Cow position: chr5:25935886-25936070 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 147
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 21, 11

Conread position: 125-370
Cow position: chr5:630840-631085 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 11

Conread position: 125-370
Cow position: chr5:2395232-2395477 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 125-370
Cow position: chr5:27933404-27933649 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 21, 11

Conread position: 125-370
Cow position: chr5:35031263-35031508 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 11

Conread position: 125-370
Cow position: chr5:48496924-48497168 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 21, 11

Conread position: 125-370
Cow position: chr5:50675043-50674798 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 11

Conread position: 126-281
Cow position: chr5:12105437-12105591 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 143, 0

Conread position: 126-287
Cow position: chr5:73769683-73769840 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 10

Conread position: 126-346
Cow position: chr5:32336413-32336197 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 148
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 126-366
Cow position: chr5:66338722-66338958 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 82, 108

Conread position: 126-370
Cow position: chr5:9867814-9868056 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 20, 10

Conread position: 126-370
Cow position: chr5:59136179-59136423 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 20, 10

Conread position: 126-370
Cow position: chr5:59473657-59473901 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 20, 10

Conread position: 127-325
Cow position: chr5:40396978-40397174 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 163, 85

Conread position: 127-346
Cow position: chr5:49691920-49692137 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 146
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 177, 0

Conread position: 128-345
Cow position: chr5:48238454-48238236 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 115, 63

Conread position: 128-346
Cow position: chr5:20974808-20974588 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 130, 155

Conread position: 128-346
Cow position: chr5:34442156-34441936 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 128-368
Cow position: chr5:21937768-21937529 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 89, 155

Conread position: 128-393
Cow position: chr5:33471601-33471340 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 209, 36

Conread position: 129-357
Cow position: chr5:70035037-70035265 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 152

Conread position: 129-370
Cow position: chr5:27501313-27501072 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 17, 7

Conread position: 135-358
Cow position: chr5:66859659-66859438 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 156, 19

Conread position: 136-347
Cow position: chr5:63967995-63967790 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 139-255
Cow position: chr5:14703631-14703512 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 139-324
Cow position: chr5:30950496-30950306 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 139-370
Cow position: chr5:1128887-1128656 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 128
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 142-346
Cow position: chr5:67598350-67598554 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 144, 163

Conread position: 142-365
Cow position: chr5:55175735-55175516 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 85, 67

Conread position: 142-373
Cow position: chr5:26462304-26462533 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 157, 20

Conread position: 143-255
Cow position: chr5:9430821-9430712 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 143-259
Cow position: chr5:57890124-57890240 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 143-279
Cow position: chr5:5848806-5848673 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 143-284
Cow position: chr5:28807532-28807674 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 119
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 143-288
Cow position: chr5:20959009-20959150 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 121
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 143-288
Cow position: chr5:34887545-34887400 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 143-324
Cow position: chr5:7808186-7808009 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 143, 23

Conread position: 143-346
Cow position: chr5:50746394-50746595 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 166, 9

Conread position: 143-348
Cow position: chr5:32153663-32153458 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 170, 159

Conread position: 143-348
Cow position: chr5:75259481-75259686 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 167, 158

Conread position: 143-349
Cow position: chr5:14538996-14538794 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 166, 0

Conread position: 143-370
Cow position: chr5:12718907-12719133 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 39, 0

Conread position: 143-370
Cow position: chr5:23397540-23397759 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 143-370
Cow position: chr5:31681914-31682139 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 194, 0

Conread position: 143-370
Cow position: chr5:38805691-38805464 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 153
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 143-373
Cow position: chr5:20971425-20971197 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 180, 0

Conread position: 143-379
Cow position: chr5:37255703-37255467 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 143-379
Cow position: chr5:58793961-58793726 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 55, 0

Conread position: 143-388
Cow position: chr5:67212034-67212276 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 167, 104

Conread position: 143-459
Cow position: chr5:34288815-34288505 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 218
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 19, 93

Conread position: 143-460
Cow position: chr5:9894471-9894162 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 208
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 140, 76

Conread position: 143-480
Cow position: chr5:28927944-28927599 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 239
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 106, 227

Conread position: 144-313
Cow position: chr5:44447716-44447548 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 157, 0

Conread position: 144-370
Cow position: chr5:45881536-45881307 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 50, 0

Conread position: 144-451
Cow position: chr5:7763732-7764035 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 166, 14

Conread position: 144-525
Cow position: chr5:42845946-42845563 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 248
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 166, 146

Conread position: 145-269
Cow position: chr5:48926038-48925914 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 145-288
Cow position: chr5:60215449-60215589 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 119
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 90, 0

Conread position: 145-348
Cow position: chr5:14278825-14279028 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 145-370
Cow position: chr5:18514327-18514102 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 145-370
Cow position: chr5:58516449-58516224 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 147-287
Cow position: chr5:6219760-6219901 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 147-370
Cow position: chr5:472971-472745 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 13, 0

Conread position: 148-367
Cow position: chr5:51315190-51314969 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 105, 126

Conread position: 148-370
Cow position: chr5:29240127-29240349 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 148-370
Cow position: chr5:45837502-45837724 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 149-288
Cow position: chr5:56137235-56137370 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 149-324
Cow position: chr5:20783286-20783458 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 71

Conread position: 149-324
Cow position: chr5:58208403-58208585 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 42, 151

Conread position: 149-346
Cow position: chr5:5881087-5880890 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 141, 160

Conread position: 149-348
Cow position: chr5:39284620-39284420 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 150, 23

Conread position: 150-346
Cow position: chr5:23647349-23647153 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 23, 128

Conread position: 150-349
Cow position: chr5:52645420-52645217 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 98, 132

Conread position: 150-489
Cow position: chr5:47313133-47313473 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 241
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 131, 143

Conread position: 150-500
Cow position: chr5:39936763-39937117 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 160, 138

Conread position: 151-330
Cow position: chr5:35123883-35123699 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 105, 151

Conread position: 151-348
Cow position: chr5:17631212-17631012 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 139, 99

Conread position: 151-498
Cow position: chr5:45226167-45225817 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 246
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 101, 7

Conread position: 152-274
Cow position: chr5:73551398-73551276 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 105
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 152-284
Cow position: chr5:75726141-75726009 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 114
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 152-291
Cow position: chr5:43446495-43446356 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 117
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 152-346
Cow position: chr5:24539284-24539093 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 138, 58

Conread position: 152-346
Cow position: chr5:67584058-67584253 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 44

Conread position: 152-369
Cow position: chr5:3453797-3453580 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 152-370
Cow position: chr5:52243753-52243535 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 152-370
Cow position: chr5:64650790-64651008 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 152-386
Cow position: chr5:75725892-75725660 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 134, 0

Conread position: 152-477
Cow position: chr5:60519837-60520149 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 158, 83

Conread position: 154-279
Cow position: chr5:10253257-10253382 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 105
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 154-288
Cow position: chr5:5725401-5725271 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 154-348
Cow position: chr5:47347019-47347213 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 154-370
Cow position: chr5:35807285-35807069 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 90, 83

Conread position: 155-289
Cow position: chr5:40961892-40962028 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 155-346
Cow position: chr5:29563886-29564074 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 127, 136

Conread position: 155-348
Cow position: chr5:40559502-40559311 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 129, 143

Conread position: 155-384
Cow position: chr5:60947891-60948109 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 135, 41

Conread position: 157-288
Cow position: chr5:20344835-20344967 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 6, 0

Conread position: 157-322
Cow position: chr5:43330026-43329861 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 157-324
Cow position: chr5:52269521-52269352 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 144

Conread position: 157-388
Cow position: chr5:61725638-61725867 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 153, 56

Conread position: 158-324
Cow position: chr5:26990066-26990227 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 62, 39

Conread position: 158-347
Cow position: chr5:57787045-57787234 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 36, 81

Conread position: 158-498
Cow position: chr5:43858760-43858428 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 232
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 301, 173

Conread position: 159-288
Cow position: chr5:75244617-75244492 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 159-367
Cow position: chr5:5685390-5685183 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 143, 0

Conread position: 159-370
Cow position: chr5:39361437-39361226 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 159-370
Cow position: chr5:62397024-62397236 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 162, 0

Conread position: 159-373
Cow position: chr5:45965983-45965771 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 181, 0

Conread position: 159-400
Cow position: chr5:43677007-43676767 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 131, 140

Conread position: 160-346
Cow position: chr5:14781217-14781033 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 143, 0

Conread position: 160-348
Cow position: chr5:44797045-44796861 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 150, 75

Conread position: 160-373
Cow position: chr5:46052134-46051922 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 147, 138

Conread position: 160-459
Cow position: chr5:67913450-67913750 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 189
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 233, 100

Conread position: 161-288
Cow position: chr5:34560812-34560939 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 161-368
Cow position: chr5:34915812-34916019 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 120

Conread position: 161-370
Cow position: chr5:1641568-1641777 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 161-370
Cow position: chr5:51357831-51357624 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 149, 95

Conread position: 162-284
Cow position: chr5:53825198-53825318 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 162-288
Cow position: chr5:6151158-6151032 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 162-370
Cow position: chr5:12212501-12212293 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 162-373
Cow position: chr5:42533044-42532833 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 163-370
Cow position: chr5:37084371-37084578 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 163-384
Cow position: chr5:66119583-66119359 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 92, 136

Conread position: 165-370
Cow position: chr5:4537875-4538079 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 165-370
Cow position: chr5:11618467-11618262 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 166-346
Cow position: chr5:14668602-14668781 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 124, 111

Conread position: 166-489
Cow position: chr5:42747838-42748157 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 209
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 293, 50

Conread position: 167-346
Cow position: chr5:31437333-31437155 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 167-373
Cow position: chr5:60037972-60037766 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 169-388
Cow position: chr5:20555069-20554852 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 5, 0

Conread position: 170-335
Cow position: chr5:31694025-31693860 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 170-370
Cow position: chr5:366305-366105 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 170-370
Cow position: chr5:51902474-51902274 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 170-495
Cow position: chr5:60715675-60715358 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 213
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 140, 126

Conread position: 171-290
Cow position: chr5:74003965-74003842 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 171-324
Cow position: chr5:47857305-47857462 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 78, 132

Conread position: 171-370
Cow position: chr5:37271332-37271531 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 73, 64

Conread position: 171-374
Cow position: chr5:43990074-43990277 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 119, 129

Conread position: 172-370
Cow position: chr5:47036771-47036969 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 135, 130

Conread position: 173-348
Cow position: chr5:35280775-35280950 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 174-389
Cow position: chr5:50722731-50722943 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 20, 125

Conread position: 175-344
Cow position: chr5:56234143-56233978 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 175-370
Cow position: chr5:40767926-40767730 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 175-483
Cow position: chr5:5111392-5111082 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 198
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 286, 227

Conread position: 176-288
Cow position: chr5:18716445-18716333 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 176-478
Cow position: chr5:65941566-65941264 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 195
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 134, 36

Conread position: 177-288
Cow position: chr5:40831000-40831111 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 177-288
Cow position: chr5:63033060-63033172 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 177-370
Cow position: chr5:34249304-34249497 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 133
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 178-288
Cow position: chr5:53735875-53735985 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 178-349
Cow position: chr5:6190634-6190806 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 16, 111

Conread position: 178-379
Cow position: chr5:3281519-3281720 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 132, 121

Conread position: 179-288
Cow position: chr5:53055864-53055755 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 179-348
Cow position: chr5:58037573-58037404 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 179-370
Cow position: chr5:262139-261948 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 179-370
Cow position: chr5:11676041-11675850 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 179-370
Cow position: chr5:20341617-20341426 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 114, 120

Conread position: 180-286
Cow position: chr5:50483172-50483067 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 181-291
Cow position: chr5:20777734-20777624 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 181-348
Cow position: chr5:65752550-65752714 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 84

Conread position: 181-370
Cow position: chr5:10536243-10536432 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 181-370
Cow position: chr5:37819881-37820071 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 182-348
Cow position: chr5:64392846-64393012 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 128, 120

Conread position: 183-388
Cow position: chr5:4551825-4552029 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 184-379
Cow position: chr5:54746162-54745967 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 186-370
Cow position: chr5:24918200-24918384 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 186-370
Cow position: chr5:73139877-73139693 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 187-370
Cow position: chr5:35174607-35174424 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 126
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 190-348
Cow position: chr5:45170061-45170220 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 105

Conread position: 190-370
Cow position: chr5:59269443-59269622 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 190-467
Cow position: chr5:73484887-73484605 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 180
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 193, 0

Conread position: 193-381
Cow position: chr5:37653983-37654169 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 149, 132

Conread position: 193-483
Cow position: chr5:50950256-50950549 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 194
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 92, 103

Conread position: 194-348
Cow position: chr5:33661558-33661712 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 102

Conread position: 194-370
Cow position: chr5:5235558-5235381 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 194-370
Cow position: chr5:46721183-46721359 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 99, 105

Conread position: 195-525
Cow position: chr5:59443546-59443218 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 211
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 115, 95

Conread position: 196-348
Cow position: chr5:52732451-52732299 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 197-373
Cow position: chr5:50839555-50839731 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 91, 102

Conread position: 200-370
Cow position: chr5:31261761-31261931 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 200-370
Cow position: chr5:76098537-76098367 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 203-348
Cow position: chr5:50582580-50582435 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 203-459
Cow position: chr5:43474567-43474813 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 174
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 190, 27

Conread position: 204-381
Cow position: chr5:26173652-26173472 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 205-370
Cow position: chr5:31740495-31740330 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 217-492
Cow position: chr5:4507234-4506952 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 182
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 179, 0

Show alignments to all cow chromosomes.