Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-MPL-MPL384_8_I21.5
        

               Conread position:
               1-123
               

               Cow position:
               chr6:9839454-9839333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               120, 27
               

               Conread position:
               1-252
               

               Cow position:
               chr6:16596664-16596917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               130, 220
               

               Conread position:
               1-288
               

               Cow position:
               chr6:15046569-15046281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               121, 188
               

               Conread position:
               1-291
               

               Cow position:
               chr6:39416855-39417148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               114, 80
               

               Conread position:
               1-298
               

               Cow position:
               chr6:4698658-4698353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               73, 168
               

               Conread position:
               1-322
               

               Cow position:
               chr6:6187791-6188099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               71, 25
               

               Conread position:
               1-324
               

               Cow position:
               chr6:25783830-25784160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 287
               

               Conread position:
               1-370
               

               Cow position:
               chr6:31568172-31567805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 7
               

               Conread position:
               1-384
               

               Cow position:
               chr6:48946845-48946463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               114, 217
               

               Conread position:
               2-117
               

               Cow position:
               chr6:9025571-9025686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-130
               

               Cow position:
               chr6:25178649-25178518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               2-131
               

               Cow position:
               chr6:6160250-6160379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-131
               

               Cow position:
               chr6:29833564-29833435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-132
               

               Cow position:
               chr6:40137729-40137599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-172
               

               Cow position:
               chr6:208678-208847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               141, 54
               

               Conread position:
               2-175
               

               Cow position:
               chr6:22225325-22225150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               45, 157
               

               Conread position:
               2-191
               

               Cow position:
               chr6:38896346-38896157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               127, 136
               

               Conread position:
               2-205
               

               Cow position:
               chr6:14148260-14148467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               127, 65
               

               Conread position:
               2-217
               

               Cow position:
               chr6:59277676-59277454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               2-221
               

               Cow position:
               chr6:13406008-13406234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               72, 57
               

               Conread position:
               2-225
               

               Cow position:
               chr6:143832-143610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               149, 50
               

               Conread position:
               2-228
               

               Cow position:
               chr6:21222462-21222692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               128, 142
               

               Conread position:
               2-233
               

               Cow position:
               chr6:7824139-7824374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               117, 92
               

               Conread position:
               2-233
               

               Cow position:
               chr6:35121729-35121492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               72, 225
               

               Conread position:
               2-233
               

               Cow position:
               chr6:52401318-52401550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               128, 45
               

               Conread position:
               2-240
               

               Cow position:
               chr6:828158-827917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               122, 173
               

               Conread position:
               2-247
               

               Cow position:
               chr6:5122829-5122581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               120, 46
               

               Conread position:
               2-249
               

               Cow position:
               chr6:1077589-1077332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               2-253
               

               Cow position:
               chr6:15181803-15182052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               137, 58
               

               Conread position:
               2-254
               

               Cow position:
               chr6:10570231-10569979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               210, 16
               

               Conread position:
               2-254
               

               Cow position:
               chr6:44375416-44375672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               134, 28
               

               Conread position:
               2-254
               

               Cow position:
               chr6:44949758-44949494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               96, 182
               

               Conread position:
               2-255
               

               Cow position:
               chr6:29084724-29084464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               2-255
               

               Cow position:
               chr6:42617152-42617403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               16, 113
               

               Conread position:
               2-255
               

               Cow position:
               chr6:55456401-55456141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               123, 16
               

               Conread position:
               2-255
               

               Cow position:
               chr6:66550235-66550493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               132, 65
               

               Conread position:
               2-256
               

               Cow position:
               chr6:610933-611192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               127, 65
               

               Conread position:
               2-259
               

               Cow position:
               chr6:52240015-52239752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               122, 255
               

               Conread position:
               2-270
               

               Cow position:
               chr6:35725612-35725886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               72, 105
               

               Conread position:
               2-272
               

               Cow position:
               chr6:40157860-40157587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 147
               

               Conread position:
               2-272
               

               Cow position:
               chr6:63768339-63768063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               120, 60
               

               Conread position:
               2-283
               

               Cow position:
               chr6:10337515-10337237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               26, 176
               

               Conread position:
               2-288
               

               Cow position:
               chr6:38594972-38594692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               89, 14
               

               Conread position:
               2-288
               

               Cow position:
               chr6:52556948-52556662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 236
               

               Conread position:
               2-289
               

               Cow position:
               chr6:27365843-27366136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               131, 284
               

               Conread position:
               2-289
               

               Cow position:
               chr6:30076597-30076303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               212
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               124, 82
               

               Conread position:
               2-317
               

               Cow position:
               chr6:33852261-33851940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 70
               

               Conread position:
               2-323
               

               Cow position:
               chr6:36918646-36918325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 199
               

               Conread position:
               2-324
               

               Cow position:
               chr6:46528949-46529260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               132, 74
               

               Conread position:
               2-324
               

               Cow position:
               chr6:59507867-59508198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 283
               

               Conread position:
               2-328
               

               Cow position:
               chr6:41357327-41357650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               126, 87
               

               Conread position:
               2-340
               

               Cow position:
               chr6:37735304-37735649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               71, 213
               

               Conread position:
               2-343
               

               Cow position:
               chr6:6166926-6167269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               127, 8
               

               Conread position:
               2-345
               

               Cow position:
               chr6:6079383-6079033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               127, 49
               

               Conread position:
               2-345
               

               Cow position:
               chr6:33470787-33471134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               56, 278
               

               Conread position:
               2-346
               

               Cow position:
               chr6:1733991-1733644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 135
               

               Conread position:
               2-346
               

               Cow position:
               chr6:6340680-6341023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               123, 229
               

               Conread position:
               2-346
               

               Cow position:
               chr6:11704719-11705066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               92, 50
               

               Conread position:
               2-346
               

               Cow position:
               chr6:12387799-12387454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 260
               

               Conread position:
               2-346
               

               Cow position:
               chr6:31688860-31688512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               132, 224
               

               Conread position:
               2-346
               

               Cow position:
               chr6:31953155-31952806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               109, 59
               

               Conread position:
               2-346
               

               Cow position:
               chr6:35274947-35274597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               117, 269
               

               Conread position:
               2-346
               

               Cow position:
               chr6:38988150-38987805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 258
               

               Conread position:
               2-346
               

               Cow position:
               chr6:45155649-45155979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               151, 123
               

               Conread position:
               2-346
               

               Cow position:
               chr6:47942970-47943313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               129, 78
               

               Conread position:
               2-346
               

               Cow position:
               chr6:50800891-50800533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               255
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               132, 216
               

               Conread position:
               2-346
               

               Cow position:
               chr6:52001901-52002239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               2-346
               

               Cow position:
               chr6:55842646-55842292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               113, 306
               

               Conread position:
               2-346
               

               Cow position:
               chr6:58594590-58594236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               245
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               64, 52
               

               Conread position:
               2-346
               

               Cow position:
               chr6:58707821-58707461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               2-346
               

               Cow position:
               chr6:60781932-60781580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               248
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               123, 37
               

               Conread position:
               2-346
               

               Cow position:
               chr6:60891123-60890773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               122, 174
               

               Conread position:
               2-346
               

               Cow position:
               chr6:61324993-61324650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               113, 162
               

               Conread position:
               2-347
               

               Cow position:
               chr6:16675343-16675687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 232
               

               Conread position:
               2-348
               

               Cow position:
               chr6:1914156-1914490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               238
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               303, 134
               

               Conread position:
               2-348
               

               Cow position:
               chr6:4824487-4824835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               239
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               122, 258
               

               Conread position:
               2-356
               

               Cow position:
               chr6:35181718-35181373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 37
               

               Conread position:
               2-366
               

               Cow position:
               chr6:44510770-44511131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               259, 24
               

               Conread position:
               2-372
               

               Cow position:
               chr6:16625467-16625841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 310
               

               Conread position:
               2-373
               

               Cow position:
               chr6:5501270-5500897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 161
               

               Conread position:
               2-383
               

               Cow position:
               chr6:28811473-28811089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 24
               

               Conread position:
               2-387
               

               Cow position:
               chr6:55660207-55659807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               126, 72
               

               Conread position:
               2-480
               

               Cow position:
               chr6:58073563-58074051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 305
               

               Conread position:
               2-483
               

               Cow position:
               chr6:32121423-32121912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 10
               

               Conread position:
               2-496
               

               Cow position:
               chr6:53178163-53178655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 309
               

               Conread position:
               3-116
               

               Cow position:
               chr6:67969435-67969322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-117
               

               Cow position:
               chr6:8207903-8208017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-117
               

               Cow position:
               chr6:10536302-10536188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-117
               

               Cow position:
               chr6:37217316-37217430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-117
               

               Cow position:
               chr6:53537753-53537867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-120
               

               Cow position:
               chr6:19684290-19684173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-122
               

               Cow position:
               chr6:5610130-5610011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-122
               

               Cow position:
               chr6:44623476-44623357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-128
               

               Cow position:
               chr6:57329955-57330080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-129
               

               Cow position:
               chr6:61268651-61268777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-134
               

               Cow position:
               chr6:28401322-28401451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               3-134
               

               Cow position:
               chr6:34386807-34386938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-134
               

               Cow position:
               chr6:54900766-54900897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-138
               

               Cow position:
               chr6:36830709-36830844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-140
               

               Cow position:
               chr6:22332819-22332682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-145
               

               Cow position:
               chr6:1498837-1498978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               111, 116
               

               Conread position:
               3-151
               

               Cow position:
               chr6:41567361-41567507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               3-156
               

               Cow position:
               chr6:8442880-8442727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-163
               

               Cow position:
               chr6:26324524-26324364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-166
               

               Cow position:
               chr6:51544401-51544238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-171
               

               Cow position:
               chr6:28558964-28559132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               61, 75
               

               Conread position:
               3-174
               

               Cow position:
               chr6:4022204-4022381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               3-175
               

               Cow position:
               chr6:2366617-2366439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               121, 20
               

               Conread position:
               3-177
               

               Cow position:
               chr6:8432568-8432740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               69, 47
               

               Conread position:
               3-178
               

               Cow position:
               chr6:20410660-20410492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               3-178
               

               Cow position:
               chr6:54293662-54293843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               3-181
               

               Cow position:
               chr6:45160857-45160680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               3-181
               

               Cow position:
               chr6:50637933-50638111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-186
               

               Cow position:
               chr6:39897386-39897203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               147
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-188
               

               Cow position:
               chr6:451587-451402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-189
               

               Cow position:
               chr6:28164200-28164392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               54, 62
               

               Conread position:
               3-191
               

               Cow position:
               chr6:60379840-60380028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               143, 130
               

               Conread position:
               3-192
               

               Cow position:
               chr6:6614974-6615167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               3-205
               

               Cow position:
               chr6:55289493-55289291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-206
               

               Cow position:
               chr6:41495161-41494958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               159
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-208
               

               Cow position:
               chr6:43086938-43086733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               62, 98
               

               Conread position:
               3-209
               

               Cow position:
               chr6:29298893-29299099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 133
               

               Conread position:
               3-209
               

               Cow position:
               chr6:53461494-53461291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               3-209
               

               Cow position:
               chr6:55170147-55170346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-210
               

               Cow position:
               chr6:28675205-28675412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               163
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-211
               

               Cow position:
               chr6:30705052-30705260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-212
               

               Cow position:
               chr6:2582287-2582502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               3-213
               

               Cow position:
               chr6:223822-223626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               3-222
               

               Cow position:
               chr6:47574462-47574675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               3-224
               

               Cow position:
               chr6:40760706-40760939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               3-227
               

               Cow position:
               chr6:40169501-40169277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-228
               

               Cow position:
               chr6:18474380-18474155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-228
               

               Cow position:
               chr6:51970339-51970106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               125, 194
               

               Conread position:
               3-231
               

               Cow position:
               chr6:209394-209620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               146, 18
               

               Conread position:
               3-233
               

               Cow position:
               chr6:1468262-1468035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               94, 168
               

               Conread position:
               3-233
               

               Cow position:
               chr6:4468291-4468518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               176, 74
               

               Conread position:
               3-233
               

               Cow position:
               chr6:44131176-44130946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-233
               

               Cow position:
               chr6:50114373-50114603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 50
               

               Conread position:
               3-233
               

               Cow position:
               chr6:56556935-56556705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-241
               

               Cow position:
               chr6:34476079-34475843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               3-242
               

               Cow position:
               chr6:47988588-47988827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-243
               

               Cow position:
               chr6:6038582-6038337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               140, 64
               

               Conread position:
               3-243
               

               Cow position:
               chr6:18142658-18142890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               3-244
               

               Cow position:
               chr6:26636315-26636563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               38, 47
               

               Conread position:
               3-245
               

               Cow position:
               chr6:44098360-44098606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               124, 53
               

               Conread position:
               3-247
               

               Cow position:
               chr6:35435111-35435372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               43, 246
               

               Conread position:
               3-248
               

               Cow position:
               chr6:1510099-1510348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               124, 92
               

               Conread position:
               3-248
               

               Cow position:
               chr6:7175597-7175346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-248
               

               Cow position:
               chr6:9751524-9751273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               12, 82
               

               Conread position:
               3-248
               

               Cow position:
               chr6:29239236-29239481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               232, 99
               

               Conread position:
               3-248
               

               Cow position:
               chr6:39957889-39958138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               113, 27
               

               Conread position:
               3-249
               

               Cow position:
               chr6:1887120-1886874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-249
               

               Cow position:
               chr6:47381347-47381597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               113, 237
               

               Conread position:
               3-249
               

               Cow position:
               chr6:50983710-50983956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-249
               

               Cow position:
               chr6:54865666-54865422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-250
               

               Cow position:
               chr6:32665107-32665354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-250
               

               Cow position:
               chr6:53918201-53917954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-252
               

               Cow position:
               chr6:23532123-23532378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               3-252
               

               Cow position:
               chr6:26914626-26914871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               3-252
               

               Cow position:
               chr6:40139618-40139372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-253
               

               Cow position:
               chr6:42742278-42742521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               3-253
               

               Cow position:
               chr6:65871441-65871695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               121, 7
               

               Conread position:
               3-254
               

               Cow position:
               chr6:16103723-16103470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               3-254
               

               Cow position:
               chr6:19044867-19045116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               3-254
               

               Cow position:
               chr6:22017503-22017250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               127, 96
               

               Conread position:
               3-255
               

               Cow position:
               chr6:17344872-17345126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 24
               

               Conread position:
               3-255
               

               Cow position:
               chr6:21541601-21541858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               3-255
               

               Cow position:
               chr6:46251437-46251182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               24, 9
               

               Conread position:
               3-255
               

               Cow position:
               chr6:47977608-47977859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               3-255
               

               Cow position:
               chr6:67950458-67950708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               3-257
               

               Cow position:
               chr6:68048778-68049031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               3-259
               

               Cow position:
               chr6:3118713-3118452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               69, 200
               

               Conread position:
               3-259
               

               Cow position:
               chr6:24583714-24583453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               109, 65
               

               Conread position:
               3-259
               

               Cow position:
               chr6:45065504-45065249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               130, 49
               

               Conread position:
               3-259
               

               Cow position:
               chr6:57384040-57384283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               3-259
               

               Cow position:
               chr6:66873858-66874111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               3-260
               

               Cow position:
               chr6:6068160-6067905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 81
               

               Conread position:
               3-262
               

               Cow position:
               chr6:28136415-28136674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-267
               

               Cow position:
               chr6:20515252-20515516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-268
               

               Cow position:
               chr6:539812-540071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               56, 149
               

               Conread position:
               3-268
               

               Cow position:
               chr6:33509112-33509366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               3-269
               

               Cow position:
               chr6:89572-89312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               3-269
               

               Cow position:
               chr6:529177-528905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               138, 49
               

               Conread position:
               3-270
               

               Cow position:
               chr6:16276408-16276681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               3-272
               

               Cow position:
               chr6:21396542-21396276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 207
               

               Conread position:
               3-272
               

               Cow position:
               chr6:44598374-44598105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-272
               

               Cow position:
               chr6:60441672-60441932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               195
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               182, 0
               

               Conread position:
               3-276
               

               Cow position:
               chr6:42131300-42131016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               3-279
               

               Cow position:
               chr6:10706381-10706104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 19
               

               Conread position:
               3-280
               

               Cow position:
               chr6:24713697-24713419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-282
               

               Cow position:
               chr6:46283429-46283150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 78
               

               Conread position:
               3-283
               

               Cow position:
               chr6:9320957-9321237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-284
               

               Cow position:
               chr6:4903121-4902847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 141
               

               Conread position:
               3-284
               

               Cow position:
               chr6:10612384-10612668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 226
               

               Conread position:
               3-284
               

               Cow position:
               chr6:11442293-11442014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 87
               

               Conread position:
               3-284
               

               Cow position:
               chr6:15328443-15328740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 223
               

               Conread position:
               3-284
               

               Cow position:
               chr6:18961993-18961714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 0
               

               Conread position:
               3-284
               

               Cow position:
               chr6:21590254-21590525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 170
               

               Conread position:
               3-284
               

               Cow position:
               chr6:33865565-33865282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               3-284
               

               Cow position:
               chr6:38233532-38233785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               211, 38
               

               Conread position:
               3-284
               

               Cow position:
               chr6:49411149-49410872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 69
               

               Conread position:
               3-284
               

               Cow position:
               chr6:50973627-50973349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               210
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               137, 219
               

               Conread position:
               3-285
               

               Cow position:
               chr6:22995452-22995171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               128, 35
               

               Conread position:
               3-285
               

               Cow position:
               chr6:27852179-27851895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 64
               

               Conread position:
               3-285
               

               Cow position:
               chr6:42106518-42106242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               3-285
               

               Cow position:
               chr6:59687281-59687559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               215
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               63, 75
               

               Conread position:
               3-287
               

               Cow position:
               chr6:11388937-11388660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               176
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               3-287
               

               Cow position:
               chr6:39080594-39080878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-287
               

               Cow position:
               chr6:42518496-42518786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               3-287
               

               Cow position:
               chr6:53933320-53933029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 74
               

               Conread position:
               3-288
               

               Cow position:
               chr6:222911-222628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               3-288
               

               Cow position:
               chr6:8210054-8209777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               3-288
               

               Cow position:
               chr6:8284098-8283815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 6
               

               Conread position:
               3-288
               

               Cow position:
               chr6:9737587-9737301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 279
               

               Conread position:
               3-288
               

               Cow position:
               chr6:12622998-12623283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-288
               

               Cow position:
               chr6:14929121-14929405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-288
               

               Cow position:
               chr6:17556908-17557186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-288
               

               Cow position:
               chr6:19809209-19809488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 43
               

               Conread position:
               3-288
               

               Cow position:
               chr6:27240436-27240169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               3-288
               

               Cow position:
               chr6:28156596-28156305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 260
               

               Conread position:
               3-288
               

               Cow position:
               chr6:28322644-28322367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               3-288
               

               Cow position:
               chr6:35238490-35238205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               121, 93
               

               Conread position:
               3-288
               

               Cow position:
               chr6:39137168-39137437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               207
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               3-288
               

               Cow position:
               chr6:40497099-40497389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               114, 64
               

               Conread position:
               3-288
               

               Cow position:
               chr6:46948492-46948774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 27
               

               Conread position:
               3-288
               

               Cow position:
               chr6:51869614-51869897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               3-288
               

               Cow position:
               chr6:63094334-63094619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-289
               

               Cow position:
               chr6:39093293-39093572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 71
               

               Conread position:
               3-290
               

               Cow position:
               chr6:28180436-28180152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 77
               

               Conread position:
               3-290
               

               Cow position:
               chr6:59296312-59296593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 133
               

               Conread position:
               3-291
               

               Cow position:
               chr6:19707106-19707394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-291
               

               Cow position:
               chr6:20268206-20268492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 119
               

               Conread position:
               3-291
               

               Cow position:
               chr6:26771445-26771156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-291
               

               Cow position:
               chr6:28065665-28065952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 64
               

               Conread position:
               3-291
               

               Cow position:
               chr6:45723448-45723159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 134
               

               Conread position:
               3-291
               

               Cow position:
               chr6:45747331-45747042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 134
               

               Conread position:
               3-291
               

               Cow position:
               chr6:59077035-59076746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-291
               

               Cow position:
               chr6:65921078-65920794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 64
               

               Conread position:
               3-299
               

               Cow position:
               chr6:12648052-12648356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 286
               

               Conread position:
               3-303
               

               Cow position:
               chr6:28161086-28161383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 64
               

               Conread position:
               3-317
               

               Cow position:
               chr6:61136693-61137002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 234
               

               Conread position:
               3-318
               

               Cow position:
               chr6:12578104-12578420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               99, 40
               

               Conread position:
               3-319
               

               Cow position:
               chr6:6721650-6721955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               142, 19
               

               Conread position:
               3-321
               

               Cow position:
               chr6:33949487-33949151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               121, 20
               

               Conread position:
               3-322
               

               Cow position:
               chr6:43345912-43345614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               147, 62
               

               Conread position:
               3-322
               

               Cow position:
               chr6:60851470-60851154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               145, 25
               

               Conread position:
               3-324
               

               Cow position:
               chr6:5302872-5302556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 123
               

               Conread position:
               3-324
               

               Cow position:
               chr6:11638211-11637900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 64
               

               Conread position:
               3-324
               

               Cow position:
               chr6:14696844-14696524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 125
               

               Conread position:
               3-324
               

               Cow position:
               chr6:16737548-16737868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 277
               

               Conread position:
               3-324
               

               Cow position:
               chr6:19712568-19712252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               3-324
               

               Cow position:
               chr6:24757821-24757500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-324
               

               Cow position:
               chr6:54647998-54647674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 0
               

               Conread position:
               3-324
               

               Cow position:
               chr6:55762917-55763235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 0
               

               Conread position:
               3-324
               

               Cow position:
               chr6:58370094-58370425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 292
               

               Conread position:
               3-324
               

               Cow position:
               chr6:62015173-62015493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 159
               

               Conread position:
               3-324
               

               Cow position:
               chr6:67544765-67544444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 299
               

               Conread position:
               3-327
               

               Cow position:
               chr6:50755550-50755874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-328
               

               Cow position:
               chr6:21831984-21831657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               3-340
               

               Cow position:
               chr6:327686-327350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-342
               

               Cow position:
               chr6:5866866-5866513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               3-344
               

               Cow position:
               chr6:6998925-6999264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               119, 47
               

               Conread position:
               3-345
               

               Cow position:
               chr6:19115452-19115784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               65, 27
               

               Conread position:
               3-345
               

               Cow position:
               chr6:57303264-57303608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               140, 52
               

               Conread position:
               3-346
               

               Cow position:
               chr6:12662656-12662310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 136
               

               Conread position:
               3-346
               

               Cow position:
               chr6:15991271-15990932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               119, 76
               

               Conread position:
               3-346
               

               Cow position:
               chr6:16430890-16430552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               149, 29
               

               Conread position:
               3-346
               

               Cow position:
               chr6:17887360-17887013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               119, 152
               

               Conread position:
               3-346
               

               Cow position:
               chr6:19842107-19841753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               88, 74
               

               Conread position:
               3-346
               

               Cow position:
               chr6:21694238-21694570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               129, 75
               

               Conread position:
               3-346
               

               Cow position:
               chr6:28147783-28148121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               235
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               307, 174
               

               Conread position:
               3-346
               

               Cow position:
               chr6:48107560-48107900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               123, 32
               

               Conread position:
               3-347
               

               Cow position:
               chr6:3449806-3449459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               119, 92
               

               Conread position:
               3-348
               

               Cow position:
               chr6:366743-367088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 296
               

               Conread position:
               3-348
               

               Cow position:
               chr6:6557548-6557893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr6:6839264-6839606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               120, 35
               

               Conread position:
               3-348
               

               Cow position:
               chr6:8636803-8637147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 136
               

               Conread position:
               3-348
               

               Cow position:
               chr6:9733304-9732962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 203
               

               Conread position:
               3-348
               

               Cow position:
               chr6:10695387-10695739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 169
               

               Conread position:
               3-348
               

               Cow position:
               chr6:11032666-11032321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr6:13307721-13307385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               3-348
               

               Cow position:
               chr6:13945534-13945885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               3-348
               

               Cow position:
               chr6:14389049-14388704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr6:19103231-19102885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 134
               

               Conread position:
               3-348
               

               Cow position:
               chr6:21712383-21712728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr6:25363228-25363573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr6:25374431-25374086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr6:26667348-26667002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 134
               

               Conread position:
               3-348
               

               Cow position:
               chr6:27541238-27541583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr6:28486984-28486640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr6:33466632-33466972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 64
               

               Conread position:
               3-348
               

               Cow position:
               chr6:37736597-37736942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr6:41470594-41470939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr6:41823160-41822815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr6:45751610-45751955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr6:46465356-46465700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 40
               

               Conread position:
               3-348
               

               Cow position:
               chr6:49794635-49794980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr6:55720845-55721190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chr6:56501840-56502181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 68
               

               Conread position:
               3-348
               

               Cow position:
               chr6:60516257-60516602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 125
               

               Conread position:
               3-348
               

               Cow position:
               chr6:65016362-65016018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 155
               

               Conread position:
               3-349
               

               Cow position:
               chr6:39088299-39088645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-356
               

               Cow position:
               chr6:33921726-33921373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 246
               

               Conread position:
               3-356
               

               Cow position:
               chr6:50120258-50119907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 74
               

               Conread position:
               3-357
               

               Cow position:
               chr6:50527179-50527536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 295
               

               Conread position:
               3-367
               

               Cow position:
               chr6:60485216-60485580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               251
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               178, 25
               

               Conread position:
               3-368
               

               Cow position:
               chr6:11401997-11402361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-368
               

               Cow position:
               chr6:44146274-44145908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 268
               

               Conread position:
               3-369
               

               Cow position:
               chr6:2196361-2196731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-369
               

               Cow position:
               chr6:16049619-16049260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-369
               

               Cow position:
               chr6:18912057-18911691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 296
               

               Conread position:
               3-369
               

               Cow position:
               chr6:19719247-19719613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-369
               

               Cow position:
               chr6:26830204-26830570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-369
               

               Cow position:
               chr6:31548902-31548538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 0
               

               Conread position:
               3-369
               

               Cow position:
               chr6:33884406-33884040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-369
               

               Cow position:
               chr6:39358804-39358448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               3-369
               

               Cow position:
               chr6:58940694-58940329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 85
               

               Conread position:
               3-369
               

               Cow position:
               chr6:59052095-59052461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:76764-76398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 74
               

               Conread position:
               3-370
               

               Cow position:
               chr6:444251-443884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:1406476-1406108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:2390000-2389633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:2867783-2867416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 136
               

               Conread position:
               3-370
               

               Cow position:
               chr6:2875359-2875001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr6:2898439-2898806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:3095440-3095062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 144
               

               Conread position:
               3-370
               

               Cow position:
               chr6:3152889-3153257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:6568557-6568198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr6:7137665-7137299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:7449172-7449539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:7466974-7466607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:8194821-8195187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 39
               

               Conread position:
               3-370
               

               Cow position:
               chr6:9235189-9235556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:10044883-10045250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:11020335-11020702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:11453190-11452823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:11869259-11868893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 64
               

               Conread position:
               3-370
               

               Cow position:
               chr6:12972073-12972440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:12998093-12998460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:13494416-13494047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr6:13531341-13531708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:14198324-14198688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 74
               

               Conread position:
               3-370
               

               Cow position:
               chr6:16418014-16417647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr6:17632093-17631725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr6:18503137-18502770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:18649236-18648870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 90
               

               Conread position:
               3-370
               

               Cow position:
               chr6:19515527-19515894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:19819121-19819488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:20174059-20174426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:20581102-20580735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:21163980-21164347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:21857413-21857779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:22043333-22042969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:22737029-22736666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:23567931-23567564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:23879382-23879015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:25207113-25207480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:25375935-25376303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:27093910-27093544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:27152352-27152719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:27173518-27173885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:28000719-28000354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr6:28184644-28184277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:28294148-28293781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:28700888-28700521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:31520115-31520482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:33489557-33489191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:34017047-34016679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 134
               

               Conread position:
               3-370
               

               Cow position:
               chr6:36258631-36258998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:38061289-38061655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:38917362-38916995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:40251126-40250761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 18
               

               Conread position:
               3-370
               

               Cow position:
               chr6:40278729-40279096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:40449991-40449623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 134
               

               Conread position:
               3-370
               

               Cow position:
               chr6:41158644-41158277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:41834977-41835344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:42481558-42481922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:43039589-43039953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 130
               

               Conread position:
               3-370
               

               Cow position:
               chr6:43049688-43050052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr6:43621696-43622058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr6:43921313-43921680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr6:43955229-43955596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:43999487-43999115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 138
               

               Conread position:
               3-370
               

               Cow position:
               chr6:45591822-45592193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:45765444-45765077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:45901316-45900949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:45937956-45938323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:45976176-45976543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:46607830-46607465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 58
               

               Conread position:
               3-370
               

               Cow position:
               chr6:49579774-49580141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:49963486-49963123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:52482022-52482389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:53271331-53271698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:55361633-55362000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:55388414-55388780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:56080240-56079875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:56441403-56441036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:56888089-56888447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:56926719-56927091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               60, 113
               

               Conread position:
               3-370
               

               Cow position:
               chr6:57308898-57309265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:57521852-57522219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr6:59834755-59835122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:61051446-61051079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-370
               

               Cow position:
               chr6:61443583-61443209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 242
               

               Conread position:
               3-370
               

               Cow position:
               chr6:61549050-61548683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:62665452-62665820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 134
               

               Conread position:
               3-370
               

               Cow position:
               chr6:63040658-63040291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:65863001-65863368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:67403691-67403324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chr6:67553909-67554275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 49
               

               Conread position:
               3-372
               

               Cow position:
               chr6:8145355-8144972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               267
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               129, 208
               

               Conread position:
               3-373
               

               Cow position:
               chr6:1797302-1797672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-373
               

               Cow position:
               chr6:2089935-2090305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 232
               

               Conread position:
               3-373
               

               Cow position:
               chr6:18803382-18803013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-373
               

               Cow position:
               chr6:22628051-22627681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-373
               

               Cow position:
               chr6:36901687-36902057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-373
               

               Cow position:
               chr6:54886938-54886568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-374
               

               Cow position:
               chr6:67187223-67187583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 214
               

               Conread position:
               3-381
               

               Cow position:
               chr6:10013474-10013852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-381
               

               Cow position:
               chr6:16645548-16645926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-386
               

               Cow position:
               chr6:20215719-20215336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-388
               

               Cow position:
               chr6:21312228-21311846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 81
               

               Conread position:
               3-436
               

               Cow position:
               chr6:6613968-6614395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 18
               

               Conread position:
               3-446
               

               Cow position:
               chr6:8562248-8562687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 74
               

               Conread position:
               3-451
               

               Cow position:
               chr6:46666634-46667084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 171
               

               Conread position:
               3-459
               

               Cow position:
               chr6:1784238-1783797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 0
               

               Conread position:
               3-459
               

               Cow position:
               chr6:12629546-12630005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 64
               

               Conread position:
               3-459
               

               Cow position:
               chr6:53345324-53345777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 74
               

               Conread position:
               3-460
               

               Cow position:
               chr6:28476694-28477159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               312
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               100, 137
               

               Conread position:
               3-476
               

               Cow position:
               chr6:643066-642565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 0
               

               Conread position:
               3-480
               

               Cow position:
               chr6:18447986-18447505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 294
               

               Conread position:
               3-480
               

               Cow position:
               chr6:64431474-64431939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               453, 151
               

               Conread position:
               3-485
               

               Cow position:
               chr6:2012550-2013027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 105
               

               Conread position:
               3-489
               

               Cow position:
               chr6:3979135-3978651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 233
               

               Conread position:
               3-491
               

               Cow position:
               chr6:606790-607275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 120
               

               Conread position:
               3-491
               

               Cow position:
               chr6:14839498-14839011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 134
               

               Conread position:
               3-491
               

               Cow position:
               chr6:16410731-16411206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               458, 78
               

               Conread position:
               3-492
               

               Cow position:
               chr6:11169242-11169714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 35
               

               Conread position:
               3-492
               

               Cow position:
               chr6:42565214-42565705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 65
               

               Conread position:
               3-494
               

               Cow position:
               chr6:12550795-12551288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               408, 289
               

               Conread position:
               3-495
               

               Cow position:
               chr6:15938317-15937833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               323
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               255, 64
               

               Conread position:
               3-496
               

               Cow position:
               chr6:1770666-1770180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               378, 46
               

               Conread position:
               3-496
               

               Cow position:
               chr6:34075553-34076047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               508
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 233
               

               Conread position:
               3-496
               

               Cow position:
               chr6:47540051-47540550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 301
               

               Conread position:
               3-500
               

               Cow position:
               chr6:36471040-36470542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               509
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 45
               

               Conread position:
               3-501
               

               Cow position:
               chr6:40031721-40032211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 80
               

               Conread position:
               3-577
               

               Cow position:
               chr6:30708520-30707946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               576
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               4-125
               

               Cow position:
               chr6:12927246-12927365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               4-131
               

               Cow position:
               chr6:10487129-10487251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               4-134
               

               Cow position:
               chr6:15987108-15987237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               4-154
               

               Cow position:
               chr6:10176825-10176676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               4-192
               

               Cow position:
               chr6:51393331-51393521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               126, 138
               

               Conread position:
               4-233
               

               Cow position:
               chr6:62486824-62486589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               4-244
               

               Cow position:
               chr6:55141156-55140914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               121, 63
               

               Conread position:
               4-247
               

               Cow position:
               chr6:59620168-59620412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               4-248
               

               Cow position:
               chr6:28415183-28414929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               61, 219
               

               Conread position:
               4-249
               

               Cow position:
               chr6:24623468-24623210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               112, 187
               

               Conread position:
               4-265
               

               Cow position:
               chr6:41707140-41707404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               115, 136
               

               Conread position:
               4-266
               

               Cow position:
               chr6:28503865-28504132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 192
               

               Conread position:
               4-268
               

               Cow position:
               chr6:47171725-47171985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               68, 88
               

               Conread position:
               4-289
               

               Cow position:
               chr6:54433487-54433198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               120, 87
               

               Conread position:
               4-289
               

               Cow position:
               chr6:66169903-66170192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               124, 36
               

               Conread position:
               4-290
               

               Cow position:
               chr6:47026005-47026296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               130, 177
               

               Conread position:
               4-322
               

               Cow position:
               chr6:33451499-33451813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 157
               

               Conread position:
               4-346
               

               Cow position:
               chr6:19328313-19327980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               125, 210
               

               Conread position:
               4-346
               

               Cow position:
               chr6:30892993-30892651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 230
               

               Conread position:
               4-346
               

               Cow position:
               chr6:37761917-37762259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 127
               

               Conread position:
               4-346
               

               Cow position:
               chr6:39099563-39099213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               15, 25
               

               Conread position:
               4-346
               

               Cow position:
               chr6:61066609-61066956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 298
               

               Conread position:
               4-346
               

               Cow position:
               chr6:61162237-61162583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               110, 259
               

               Conread position:
               4-346
               

               Cow position:
               chr6:64426716-64427060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 248
               

               Conread position:
               4-347
               

               Cow position:
               chr6:9755937-9755616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               124, 51
               

               Conread position:
               4-347
               

               Cow position:
               chr6:18987750-18988087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               306, 73
               

               Conread position:
               4-348
               

               Cow position:
               chr6:6342962-6343298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 62
               

               Conread position:
               4-348
               

               Cow position:
               chr6:32867677-32867334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               4-348
               

               Cow position:
               chr6:51674443-51674790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 63
               

               Conread position:
               4-348
               

               Cow position:
               chr6:60456358-60456703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 26
               

               Conread position:
               4-348
               

               Cow position:
               chr6:65862214-65862558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               286, 291
               

               Conread position:
               4-370
               

               Cow position:
               chr6:13489072-13489438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-370
               

               Cow position:
               chr6:16518346-16517968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 294
               

               Conread position:
               4-370
               

               Cow position:
               chr6:19570253-19569893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               4-370
               

               Cow position:
               chr6:52120760-52121128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               250
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               98, 107
               

               Conread position:
               4-370
               

               Cow position:
               chr6:53542792-53542426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 133
               

               Conread position:
               4-384
               

               Cow position:
               chr6:6471241-6470867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 26
               

               Conread position:
               4-384
               

               Cow position:
               chr6:38900229-38899850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               252
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               136, 181
               

               Conread position:
               4-391
               

               Cow position:
               chr6:13741226-13741606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               306, 226
               

               Conread position:
               4-495
               

               Cow position:
               chr6:4865007-4864529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 88
               

               Conread position:
               4-522
               

               Cow position:
               chr6:36928179-36928702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               528
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 242
               

               Conread position:
               5-132
               

               Cow position:
               chr6:10422673-10422799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               122, 37
               

               Conread position:
               5-132
               

               Cow position:
               chr6:39916499-39916625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               5-132
               

               Cow position:
               chr6:50446377-50446250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-179
               

               Cow position:
               chr6:36892391-36892565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-187
               

               Cow position:
               chr6:40300337-40300148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               120, 76
               

               Conread position:
               5-189
               

               Cow position:
               chr6:1274179-1273999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               5-189
               

               Cow position:
               chr6:12389386-12389579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               5-192
               

               Cow position:
               chr6:26697385-26697199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               175, 0
               

               Conread position:
               5-208
               

               Cow position:
               chr6:65898491-65898289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               5-210
               

               Cow position:
               chr6:55040957-55041162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-217
               

               Cow position:
               chr6:53811244-53811455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               65, 150
               

               Conread position:
               5-232
               

               Cow position:
               chr6:41466610-41466391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               132, 113
               

               Conread position:
               5-233
               

               Cow position:
               chr6:7009274-7009494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               5-233
               

               Cow position:
               chr6:57680856-57680624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               129, 37
               

               Conread position:
               5-240
               

               Cow position:
               chr6:726459-726228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               5-245
               

               Cow position:
               chr6:41557003-41557252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               5-246
               

               Cow position:
               chr6:32420619-32420859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               5-249
               

               Cow position:
               chr6:11466392-11466143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               119, 62
               

               Conread position:
               5-249
               

               Cow position:
               chr6:48579044-48578783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               5-253
               

               Cow position:
               chr6:15182417-15182665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 137
               

               Conread position:
               5-254
               

               Cow position:
               chr6:23366244-23365995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               123, 34
               

               Conread position:
               5-255
               

               Cow position:
               chr6:1096058-1095799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               68, 242
               

               Conread position:
               5-255
               

               Cow position:
               chr6:2894759-2895007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               5-255
               

               Cow position:
               chr6:49733464-49733714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               132, 173
               

               Conread position:
               5-255
               

               Cow position:
               chr6:55143595-55143345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-255
               

               Cow position:
               chr6:58880850-58881101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               129, 82
               

               Conread position:
               5-259
               

               Cow position:
               chr6:16298178-16298444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               5-259
               

               Cow position:
               chr6:45793331-45793586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               129, 62
               

               Conread position:
               5-259
               

               Cow position:
               chr6:47640971-47640714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 78
               

               Conread position:
               5-266
               

               Cow position:
               chr6:25773945-25773688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               5-267
               

               Cow position:
               chr6:1637278-1637015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 0
               

               Conread position:
               5-267
               

               Cow position:
               chr6:31979059-31978802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               118, 67
               

               Conread position:
               5-267
               

               Cow position:
               chr6:52697295-52697557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-268
               

               Cow position:
               chr6:479225-479488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-268
               

               Cow position:
               chr6:39330853-39330590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-269
               

               Cow position:
               chr6:1834673-1834934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               5-269
               

               Cow position:
               chr6:27477531-27477796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               5-270
               

               Cow position:
               chr6:46633789-46634057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 234
               

               Conread position:
               5-271
               

               Cow position:
               chr6:63252369-63252100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               182, 32
               

               Conread position:
               5-274
               

               Cow position:
               chr6:19443129-19443395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               129, 184
               

               Conread position:
               5-278
               

               Cow position:
               chr6:46246566-46246304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 134
               

               Conread position:
               5-279
               

               Cow position:
               chr6:65866749-65866476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 143
               

               Conread position:
               5-285
               

               Cow position:
               chr6:47039532-47039261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               262, 136
               

               Conread position:
               5-286
               

               Cow position:
               chr6:16251720-16252005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 9
               

               Conread position:
               5-288
               

               Cow position:
               chr6:3885828-3885544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               5-288
               

               Cow position:
               chr6:4389391-4389669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               5-288
               

               Cow position:
               chr6:15310334-15310051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-288
               

               Cow position:
               chr6:17865070-17865351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               5-288
               

               Cow position:
               chr6:28343180-28343462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 0
               

               Conread position:
               5-288
               

               Cow position:
               chr6:33460621-33460900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 0
               

               Conread position:
               5-288
               

               Cow position:
               chr6:34405306-34405021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 67
               

               Conread position:
               5-288
               

               Cow position:
               chr6:41193026-41193312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               5-288
               

               Cow position:
               chr6:49444798-49445078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               5-288
               

               Cow position:
               chr6:65910004-65910287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-288
               

               Cow position:
               chr6:65930899-65931192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 115
               

               Conread position:
               5-289
               

               Cow position:
               chr6:28791357-28791646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 221
               

               Conread position:
               5-289
               

               Cow position:
               chr6:40814040-40814325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               5-290
               

               Cow position:
               chr6:23008527-23008241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               121, 30
               

               Conread position:
               5-290
               

               Cow position:
               chr6:54218197-54218486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               5-291
               

               Cow position:
               chr6:11185103-11185389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 131
               

               Conread position:
               5-291
               

               Cow position:
               chr6:15275562-15275276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-324
               

               Cow position:
               chr6:17050049-17050369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 0
               

               Conread position:
               5-324
               

               Cow position:
               chr6:17111487-17111170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 222
               

               Conread position:
               5-324
               

               Cow position:
               chr6:17122068-17122385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 222
               

               Conread position:
               5-324
               

               Cow position:
               chr6:49707069-49706750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-327
               

               Cow position:
               chr6:46584813-46585135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 152
               

               Conread position:
               5-330
               

               Cow position:
               chr6:46391224-46391546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 231
               

               Conread position:
               5-344
               

               Cow position:
               chr6:2088188-2088530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               236
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               69, 23
               

               Conread position:
               5-344
               

               Cow position:
               chr6:48807456-48807127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               84, 42
               

               Conread position:
               5-345
               

               Cow position:
               chr6:36826286-36826630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               121, 48
               

               Conread position:
               5-345
               

               Cow position:
               chr6:57473924-57474249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               81, 112
               

               Conread position:
               5-346
               

               Cow position:
               chr6:2074177-2074515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 0
               

               Conread position:
               5-346
               

               Cow position:
               chr6:14306618-14306961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               123, 54
               

               Conread position:
               5-346
               

               Cow position:
               chr6:29430508-29430841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               93, 85
               

               Conread position:
               5-346
               

               Cow position:
               chr6:42008820-42008476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               102, 88
               

               Conread position:
               5-346
               

               Cow position:
               chr6:51296671-51296349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               240
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               305, 136
               

               Conread position:
               5-346
               

               Cow position:
               chr6:65891405-65891065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               229
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               151, 296
               

               Conread position:
               5-347
               

               Cow position:
               chr6:1278982-1278640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 178
               

               Conread position:
               5-347
               

               Cow position:
               chr6:10425948-10426301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               76, 138
               

               Conread position:
               5-347
               

               Cow position:
               chr6:11192905-11192581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               5-347
               

               Cow position:
               chr6:54872513-54872169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               60, 281
               

               Conread position:
               5-348
               

               Cow position:
               chr6:181863-181521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 42
               

               Conread position:
               5-348
               

               Cow position:
               chr6:3271802-3271457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 289
               

               Conread position:
               5-348
               

               Cow position:
               chr6:5851894-5851558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               5-348
               

               Cow position:
               chr6:18418923-18418580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 131
               

               Conread position:
               5-348
               

               Cow position:
               chr6:20552574-20552230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 42
               

               Conread position:
               5-348
               

               Cow position:
               chr6:24075025-24074694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               5-348
               

               Cow position:
               chr6:25218459-25218801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 62
               

               Conread position:
               5-348
               

               Cow position:
               chr6:40550022-40549679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               302, 287
               

               Conread position:
               5-348
               

               Cow position:
               chr6:47339834-47339476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 48
               

               Conread position:
               5-348
               

               Cow position:
               chr6:51733760-51734102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 0
               

               Conread position:
               5-348
               

               Cow position:
               chr6:65711356-65711699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 294
               

               Conread position:
               5-348
               

               Cow position:
               chr6:65844734-65845077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 130
               

               Conread position:
               5-348
               

               Cow position:
               chr6:68829972-68830315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 272
               

               Conread position:
               5-349
               

               Cow position:
               chr6:15137494-15137147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 105
               

               Conread position:
               5-357
               

               Cow position:
               chr6:29077257-29077610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 72
               

               Conread position:
               5-367
               

               Cow position:
               chr6:48872677-48872316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 134
               

               Conread position:
               5-373
               

               Cow position:
               chr6:24242964-24243326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 89
               

               Conread position:
               5-373
               

               Cow position:
               chr6:25790059-25789690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               5-373
               

               Cow position:
               chr6:38872849-38872483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               5-373
               

               Cow position:
               chr6:40358199-40357830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 295
               

               Conread position:
               5-374
               

               Cow position:
               chr6:27526326-27525958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 191
               

               Conread position:
               5-374
               

               Cow position:
               chr6:42267395-42267762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 230
               

               Conread position:
               5-378
               

               Cow position:
               chr6:26412913-26413283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 41
               

               Conread position:
               5-379
               

               Cow position:
               chr6:3719513-3719887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-379
               

               Cow position:
               chr6:44017149-44016769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 332
               

               Conread position:
               5-381
               

               Cow position:
               chr6:706673-707049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               302, 288
               

               Conread position:
               5-381
               

               Cow position:
               chr6:6182048-6181671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               5-381
               

               Cow position:
               chr6:8205866-8206241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               320, 0
               

               Conread position:
               5-381
               

               Cow position:
               chr6:8753779-8753404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               5-381
               

               Cow position:
               chr6:28172746-28173124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 277
               

               Conread position:
               5-381
               

               Cow position:
               chr6:39998802-39998426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 294
               

               Conread position:
               5-381
               

               Cow position:
               chr6:40975844-40976218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 21
               

               Conread position:
               5-381
               

               Cow position:
               chr6:55903768-55904138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               5-384
               

               Cow position:
               chr6:27870287-27870681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               276
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               124, 20
               

               Conread position:
               5-386
               

               Cow position:
               chr6:41232143-41232519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               5-387
               

               Cow position:
               chr6:52627139-52627516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               124, 143
               

               Conread position:
               5-388
               

               Cow position:
               chr6:12739120-12739490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               261
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               124, 139
               

               Conread position:
               5-391
               

               Cow position:
               chr6:31256615-31256998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               266
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               117, 62
               

               Conread position:
               5-393
               

               Cow position:
               chr6:60931374-60930982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               273
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               27, 100
               

               Conread position:
               5-453
               

               Cow position:
               chr6:23695527-23695968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 287
               

               Conread position:
               5-456
               

               Cow position:
               chr6:55040688-55040234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 0
               

               Conread position:
               5-459
               

               Cow position:
               chr6:60876974-60877430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               383, 0
               

               Conread position:
               5-460
               

               Cow position:
               chr6:66235018-66235464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               295
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               306, 62
               

               Conread position:
               5-461
               

               Cow position:
               chr6:2607143-2607596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 230
               

               Conread position:
               5-467
               

               Cow position:
               chr6:11288789-11288325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 295
               

               Conread position:
               5-467
               

               Cow position:
               chr6:20451635-20452097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 153
               

               Conread position:
               5-467
               

               Cow position:
               chr6:36531954-36532420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 134
               

               Conread position:
               5-467
               

               Cow position:
               chr6:64720826-64721284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               407, 132
               

               Conread position:
               5-469
               

               Cow position:
               chr6:55538596-55538129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 268
               

               Conread position:
               5-503
               

               Cow position:
               chr6:2185823-2185322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               505
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               388, 275
               

               Conread position:
               5-503
               

               Cow position:
               chr6:35873056-35872557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               506
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               262, 151
               

               Conread position:
               5-503
               

               Cow position:
               chr6:43789689-43789193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 47
               

               Conread position:
               6-168
               

               Cow position:
               chr6:37611653-37611820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               128, 57
               

               Conread position:
               6-201
               

               Cow position:
               chr6:51385932-51386135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               6-205
               

               Cow position:
               chr6:39092081-39092274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               134, 75
               

               Conread position:
               6-213
               

               Cow position:
               chr6:14289842-14289630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               128, 61
               

               Conread position:
               6-233
               

               Cow position:
               chr6:32335109-32335350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               6-253
               

               Cow position:
               chr6:44869623-44869376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               147, 107
               

               Conread position:
               6-254
               

               Cow position:
               chr6:16132686-16132935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               113, 131
               

               Conread position:
               6-254
               

               Cow position:
               chr6:40323642-40323889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               133, 204
               

               Conread position:
               6-255
               

               Cow position:
               chr6:65904977-65905223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               24, 62
               

               Conread position:
               6-259
               

               Cow position:
               chr6:20747187-20747449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               107, 71
               

               Conread position:
               6-259
               

               Cow position:
               chr6:51191307-51191572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               58, 20
               

               Conread position:
               6-283
               

               Cow position:
               chr6:3445134-3444863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               6-287
               

               Cow position:
               chr6:6768817-6769088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               6-288
               

               Cow position:
               chr6:27887601-27887869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               123, 167
               

               Conread position:
               6-288
               

               Cow position:
               chr6:66199321-66199598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 61
               

               Conread position:
               6-290
               

               Cow position:
               chr6:32262461-32262165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               133, 78
               

               Conread position:
               6-291
               

               Cow position:
               chr6:50625139-50625430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               97, 61
               

               Conread position:
               6-302
               

               Cow position:
               chr6:28112158-28111861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 155
               

               Conread position:
               6-324
               

               Cow position:
               chr6:42420798-42421109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 130
               

               Conread position:
               6-346
               

               Cow position:
               chr6:41215918-41216264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               25, 305
               

               Conread position:
               6-346
               

               Cow position:
               chr6:62211275-62211622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               22, 60
               

               Conread position:
               6-348
               

               Cow position:
               chr6:35613880-35613542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               90, 135
               

               Conread position:
               6-348
               

               Cow position:
               chr6:46161982-46161652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               6-349
               

               Cow position:
               chr6:14826880-14827200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               275, 82
               

               Conread position:
               6-370
               

               Cow position:
               chr6:22804842-22804473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 200
               

               Conread position:
               6-370
               

               Cow position:
               chr6:55239370-55239734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-373
               

               Cow position:
               chr6:20689792-20689431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               6-374
               

               Cow position:
               chr6:43394214-43394565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 26
               

               Conread position:
               6-459
               

               Cow position:
               chr6:44098618-44099067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 127
               

               Conread position:
               6-459
               

               Cow position:
               chr6:46570656-46571097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 152
               

               Conread position:
               6-477
               

               Cow position:
               chr6:10332578-10332089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               6-491
               

               Cow position:
               chr6:5958481-5958010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 47
               

               Conread position:
               6-497
               

               Cow position:
               chr6:66304308-66303822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               383, 106
               

               Conread position:
               7-164
               

               Cow position:
               chr6:34503844-34503687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-242
               

               Cow position:
               chr6:22663183-22662941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               7-246
               

               Cow position:
               chr6:22216050-22215803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               120, 202
               

               Conread position:
               7-259
               

               Cow position:
               chr6:12518759-12519016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               123, 220
               

               Conread position:
               7-259
               

               Cow position:
               chr6:55944761-55944502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               69, 14
               

               Conread position:
               7-260
               

               Cow position:
               chr6:48327887-48328142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               122, 60
               

               Conread position:
               7-264
               

               Cow position:
               chr6:6459790-6460047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-269
               

               Cow position:
               chr6:34494349-34494611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-288
               

               Cow position:
               chr6:7174969-7174697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               207
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               72, 88
               

               Conread position:
               7-288
               

               Cow position:
               chr6:13688280-13687999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 70
               

               Conread position:
               7-291
               

               Cow position:
               chr6:13597488-13597204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 129
               

               Conread position:
               7-319
               

               Cow position:
               chr6:32287151-32287462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 95
               

               Conread position:
               7-323
               

               Cow position:
               chr6:51877435-51877758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               65, 144
               

               Conread position:
               7-324
               

               Cow position:
               chr6:12506045-12505730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 7
               

               Conread position:
               7-346
               

               Cow position:
               chr6:35132691-35133036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 299
               

               Conread position:
               7-348
               

               Cow position:
               chr6:7801829-7801494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 60
               

               Conread position:
               7-348
               

               Cow position:
               chr6:16765860-16765520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               7-371
               

               Cow position:
               chr6:4156013-4155642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 14
               

               Conread position:
               7-373
               

               Cow position:
               chr6:45666259-45665893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-391
               

               Cow position:
               chr6:25358608-25358986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               347, 285
               

               Conread position:
               7-467
               

               Cow position:
               chr6:51718236-51718701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               389, 0
               

               Conread position:
               7-480
               

               Cow position:
               chr6:67214276-67214747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 81
               

               Conread position:
               7-484
               

               Cow position:
               chr6:61575124-61575616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 60
               

               Conread position:
               7-489
               

               Cow position:
               chr6:58075753-58076243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 234
               

               Conread position:
               7-510
               

               Cow position:
               chr6:52478912-52478383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               536
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 308
               

               Conread position:
               8-130
               

               Cow position:
               chr6:40511557-40511435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-134
               

               Cow position:
               chr6:44216911-44217037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-139
               

               Cow position:
               chr6:20329039-20329170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-187
               

               Cow position:
               chr6:15962267-15962081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               8-190
               

               Cow position:
               chr6:19059955-19060137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               148
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-248
               

               Cow position:
               chr6:14949978-14949743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               189, 0
               

               Conread position:
               8-248
               

               Cow position:
               chr6:30315594-30315351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               114, 233
               

               Conread position:
               8-255
               

               Cow position:
               chr6:7104554-7104308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               8-255
               

               Cow position:
               chr6:25223740-25223492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               124, 31
               

               Conread position:
               8-255
               

               Cow position:
               chr6:42726987-42726736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               122, 231
               

               Conread position:
               8-259
               

               Cow position:
               chr6:13717346-13717601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               126, 30
               

               Conread position:
               8-270
               

               Cow position:
               chr6:46292797-46292533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               204
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               64, 121
               

               Conread position:
               8-273
               

               Cow position:
               chr6:53100568-53100843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               7, 14
               

               Conread position:
               8-285
               

               Cow position:
               chr6:18905041-18904762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               7, 120
               

               Conread position:
               8-288
               

               Cow position:
               chr6:24044872-24044589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               118, 87
               

               Conread position:
               8-324
               

               Cow position:
               chr6:64888634-64888937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               134, 62
               

               Conread position:
               8-346
               

               Cow position:
               chr6:23889141-23888794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               71, 212
               

               Conread position:
               8-346
               

               Cow position:
               chr6:37644099-37644438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               186, 112
               

               Conread position:
               8-346
               

               Cow position:
               chr6:38797824-38798168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               247
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               119, 105
               

               Conread position:
               8-348
               

               Cow position:
               chr6:22507284-22507618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 48
               

               Conread position:
               8-348
               

               Cow position:
               chr6:25822466-25822132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               8-369
               

               Cow position:
               chr6:2324681-2324302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               24, 301
               

               Conread position:
               8-370
               

               Cow position:
               chr6:9226200-9226560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 128
               

               Conread position:
               9-159
               

               Cow position:
               chr6:6201012-6201161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               9-233
               

               Cow position:
               chr6:9469194-9469433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               9-282
               

               Cow position:
               chr6:65818549-65818275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               9-288
               

               Cow position:
               chr6:51467996-51468272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 228
               

               Conread position:
               9-348
               

               Cow position:
               chr6:32427782-32428117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               95, 148
               

               Conread position:
               9-467
               

               Cow position:
               chr6:47876-47415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 255
               

               Conread position:
               9-467
               

               Cow position:
               chr6:1817332-1816873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               452, 271
               

               Conread position:
               9-483
               

               Cow position:
               chr6:61632063-61631601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 37
               

               Conread position:
               9-494
               

               Cow position:
               chr6:16593628-16594100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               379, 63
               

               Conread position:
               10-134
               

               Cow position:
               chr6:11907643-11907767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-219
               

               Cow position:
               chr6:51879408-51879626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 58
               

               Conread position:
               10-255
               

               Cow position:
               chr6:3375061-3374812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               115, 82
               

               Conread position:
               10-256
               

               Cow position:
               chr6:52189316-52189066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               113, 196
               

               Conread position:
               10-259
               

               Cow position:
               chr6:42931562-42931313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               234, 143
               

               Conread position:
               10-284
               

               Cow position:
               chr6:53739975-53740249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-290
               

               Cow position:
               chr6:7835564-7835835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               246, 123
               

               Conread position:
               10-290
               

               Cow position:
               chr6:34253319-34253606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               117, 166
               

               Conread position:
               10-345
               

               Cow position:
               chr6:55573578-55573238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               237
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               112, 39
               

               Conread position:
               10-346
               

               Cow position:
               chr6:41152198-41152516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               10-346
               

               Cow position:
               chr6:47155065-47155412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               85, 29
               

               Conread position:
               10-346
               

               Cow position:
               chr6:58390340-58390004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 126
               

               Conread position:
               10-346
               

               Cow position:
               chr6:64815495-64815142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               10-356
               

               Cow position:
               chr6:22877616-22877281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               10-384
               

               Cow position:
               chr6:60673084-60673453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 81
               

               Conread position:
               10-491
               

               Cow position:
               chr6:51834938-51835412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 27
               

               Conread position:
               11-208
               

               Cow position:
               chr6:42839449-42839656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               77, 52
               

               Conread position:
               11-232
               

               Cow position:
               chr6:50685289-50685065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               110, 153
               

               Conread position:
               11-284
               

               Cow position:
               chr6:14064122-14063850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               11-284
               

               Cow position:
               chr6:28519230-28519503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               50, 74
               

               Conread position:
               11-288
               

               Cow position:
               chr6:10598664-10598934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 0
               

               Conread position:
               11-346
               

               Cow position:
               chr6:54357846-54357504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 113
               

               Conread position:
               11-349
               

               Cow position:
               chr6:16699807-16700132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 31
               

               Conread position:
               11-349
               

               Cow position:
               chr6:23987204-23986863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 291
               

               Conread position:
               11-367
               

               Cow position:
               chr6:31752588-31752941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 10
               

               Conread position:
               11-373
               

               Cow position:
               chr6:10266450-10266089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 326
               

               Conread position:
               11-456
               

               Cow position:
               chr6:32211090-32210651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 79
               

               Conread position:
               11-478
               

               Cow position:
               chr6:48567810-48567344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 282
               

               Conread position:
               12-255
               

               Cow position:
               chr6:56376854-56376603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               12-341
               

               Cow position:
               chr6:66751422-66751749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               230, 55
               

               Conread position:
               12-387
               

               Cow position:
               chr6:7253902-7253515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 105
               

               Conread position:
               13-209
               

               Cow position:
               chr6:41677644-41677848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               13-290
               

               Cow position:
               chr6:39301284-39301007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               66, 8
               

               Conread position:
               13-346
               

               Cow position:
               chr6:51370638-51370969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               109, 83
               

               Conread position:
               13-459
               

               Cow position:
               chr6:43188430-43188877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               363, 285
               

               Conread position:
               14-192
               

               Cow position:
               chr6:47923767-47923581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               14-255
               

               Cow position:
               chr6:58439530-58439760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 126
               

               Conread position:
               14-284
               

               Cow position:
               chr6:35590641-35590905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               107, 98
               

               Conread position:
               14-346
               

               Cow position:
               chr6:38454931-38454590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               232
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               111, 204
               

               Conread position:
               14-374
               

               Cow position:
               chr6:3574975-3575338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 322
               

               Conread position:
               15-237
               

               Cow position:
               chr6:23248569-23248345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               15-247
               

               Cow position:
               chr6:38440502-38440740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               15-296
               

               Cow position:
               chr6:9322682-9322957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               43, 6
               

               Conread position:
               16-318
               

               Cow position:
               chr6:13366839-13367137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 97
               

               Conread position:
               16-346
               

               Cow position:
               chr6:57397277-57397617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               115, 90
               

               Conread position:
               16-370
               

               Cow position:
               chr6:10865630-10865984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 120
               

               Conread position:
               16-370
               

               Cow position:
               chr6:41876511-41876159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 0
               

               Conread position:
               16-483
               

               Cow position:
               chr6:36651963-36652428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               321
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               5, 203
               

               Conread position:
               17-189
               

               Cow position:
               chr6:2833521-2833357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               17-284
               

               Cow position:
               chr6:40238541-40238270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               17-389
               

               Cow position:
               chr6:9375820-9375461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 73
               

               Conread position:
               18-250
               

               Cow position:
               chr6:12406903-12407136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               56, 189
               

               Conread position:
               18-288
               

               Cow position:
               chr6:46681351-46681620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 0
               

               Conread position:
               19-324
               

               Cow position:
               chr6:19170827-19171133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 278
               

               Conread position:
               20-153
               

               Cow position:
               chr6:7131303-7131170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               20-247
               

               Cow position:
               chr6:17326740-17326509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               104, 175
               

               Conread position:
               20-290
               

               Cow position:
               chr6:18955489-18955218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 0
               

               Conread position:
               20-324
               

               Cow position:
               chr6:24030919-24031223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 279
               

               Conread position:
               20-346
               

               Cow position:
               chr6:44372404-44372073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 195
               

               Conread position:
               20-348
               

               Cow position:
               chr6:10605228-10605557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 119
               

               Conread position:
               20-373
               

               Cow position:
               chr6:2668764-2668410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               262, 0
               

               Conread position:
               21-206
               

               Cow position:
               chr6:6596130-6596319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               21-269
               

               Cow position:
               chr6:3484711-3484463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 23
               

               Conread position:
               22-214
               

               Cow position:
               chr6:68365727-68365536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               126, 110
               

               Conread position:
               22-225
               

               Cow position:
               chr6:66453047-66453256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               22-228
               

               Cow position:
               chr6:7302458-7302663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               162
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               124, 80
               

               Conread position:
               22-251
               

               Cow position:
               chr6:24659404-24659178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               62, 193
               

               Conread position:
               22-259
               

               Cow position:
               chr6:30826513-30826269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               11, 38
               

               Conread position:
               22-324
               

               Cow position:
               chr6:18049481-18049178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 272
               

               Conread position:
               22-343
               

               Cow position:
               chr6:12977362-12977682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               107, 43
               

               Conread position:
               22-346
               

               Cow position:
               chr6:12515697-12516015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               232
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               112, 91
               

               Conread position:
               22-378
               

               Cow position:
               chr6:63197629-63197270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               14, 44
               

               Conread position:
               22-388
               

               Cow position:
               chr6:65261164-65260798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               109, 226
               

               Conread position:
               23-180
               

               Cow position:
               chr6:18969140-18968978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               47, 152
               

               Conread position:
               23-272
               

               Cow position:
               chr6:50571865-50572114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               23-289
               

               Cow position:
               chr6:48169492-48169758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               23-370
               

               Cow position:
               chr6:67818653-67818306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 113
               

               Conread position:
               24-225
               

               Cow position:
               chr6:15783297-15783086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               24-228
               

               Cow position:
               chr6:67304329-67304533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               24-370
               

               Cow position:
               chr6:63177818-63178164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 112
               

               Conread position:
               25-324
               

               Cow position:
               chr6:32916369-32916072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 38
               

               Conread position:
               26-191
               

               Cow position:
               chr6:26344393-26344558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               120, 110
               

               Conread position:
               26-346
               

               Cow position:
               chr6:14932176-14931850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               26-348
               

               Cow position:
               chr6:37634347-37634661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 41
               

               Conread position:
               26-496
               

               Cow position:
               chr6:5096000-5095527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 126
               

               Conread position:
               27-324
               

               Cow position:
               chr6:119516-119826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               64, 50
               

               Conread position:
               29-270
               

               Cow position:
               chr6:34115570-34115810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               179
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               29-273
               

               Cow position:
               chr6:3758845-3759089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               102, 180
               

               Conread position:
               29-284
               

               Cow position:
               chr6:54979212-54979467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 107
               

               Conread position:
               29-370
               

               Cow position:
               chr6:25095577-25095918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 107
               

               Conread position:
               29-432
               

               Cow position:
               chr6:64097098-64096695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 107
               

               Conread position:
               31-480
               

               Cow position:
               chr6:17414898-17414446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 305
               

               Conread position:
               32-287
               

               Cow position:
               chr6:45661037-45661294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               104, 24
               

               Conread position:
               32-329
               

               Cow position:
               chr6:56651963-56651667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 242
               

               Conread position:
               32-467
               

               Cow position:
               chr6:66566013-66566451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               356, 54
               

               Conread position:
               33-324
               

               Cow position:
               chr6:48422108-48421811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 272
               

               Conread position:
               35-176
               

               Cow position:
               chr6:49422189-49422048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               35-233
               

               Cow position:
               chr6:60166792-60166589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               35-291
               

               Cow position:
               chr6:63714580-63714325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               35-320
               

               Cow position:
               chr6:29210059-29210345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 236
               

               Conread position:
               35-324
               

               Cow position:
               chr6:8599347-8599639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 267
               

               Conread position:
               35-346
               

               Cow position:
               chr6:29284248-29284566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               99, 158
               

               Conread position:
               35-370
               

               Cow position:
               chr6:24262826-24263161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               36-255
               

               Cow position:
               chr6:44195064-44194830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               36-255
               

               Cow position:
               chr6:53140834-53140616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 183
               

               Conread position:
               36-275
               

               Cow position:
               chr6:51968723-51968963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               125, 87
               

               Conread position:
               36-324
               

               Cow position:
               chr6:1174941-1174656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 0
               

               Conread position:
               36-324
               

               Cow position:
               chr6:20245644-20245932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 263
               

               Conread position:
               36-370
               

               Cow position:
               chr6:25410166-25410500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 100
               

               Conread position:
               36-370
               

               Cow position:
               chr6:60066033-60066367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 100
               

               Conread position:
               36-373
               

               Cow position:
               chr6:10682302-10682644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 282
               

               Conread position:
               37-233
               

               Cow position:
               chr6:24961728-24961923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               113, 90
               

               Conread position:
               37-272
               

               Cow position:
               chr6:19695103-19695338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               37-347
               

               Cow position:
               chr6:16618731-16619034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               37-347
               

               Cow position:
               chr6:38770864-38771165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               35, 129
               

               Conread position:
               37-370
               

               Cow position:
               chr6:12947791-12947460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               37-370
               

               Cow position:
               chr6:47674685-47675016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 30
               

               Conread position:
               37-372
               

               Cow position:
               chr6:47773662-47773316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               96, 226
               

               Conread position:
               42-211
               

               Cow position:
               chr6:28977483-28977312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               42-267
               

               Cow position:
               chr6:32269286-32269063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               100, 31
               

               Conread position:
               42-323
               

               Cow position:
               chr6:60017640-60017915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               268, 35
               

               Conread position:
               42-325
               

               Cow position:
               chr6:19429027-19429315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               99, 272
               

               Conread position:
               42-346
               

               Cow position:
               chr6:6944119-6943811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               47, 139
               

               Conread position:
               42-346
               

               Cow position:
               chr6:33895688-33895390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               83, 34
               

               Conread position:
               42-369
               

               Cow position:
               chr6:46224969-46224642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 94
               

               Conread position:
               42-370
               

               Cow position:
               chr6:45617878-45617546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               104, 19
               

               Conread position:
               42-370
               

               Cow position:
               chr6:45694577-45694905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 94
               

               Conread position:
               42-370
               

               Cow position:
               chr6:52424587-52424915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 94
               

               Conread position:
               42-370
               

               Cow position:
               chr6:54202328-54202000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 94
               

               Conread position:
               42-450
               

               Cow position:
               chr6:38994081-38993665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 372
               

               Conread position:
               43-370
               

               Cow position:
               chr6:49684999-49684672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 93
               

               Conread position:
               43-388
               

               Cow position:
               chr6:49626922-49627264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 98
               

               Conread position:
               44-272
               

               Cow position:
               chr6:34030962-34031179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               45-246
               

               Cow position:
               chr6:62921676-62921472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               47-346
               

               Cow position:
               chr6:47848134-47847831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               218
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               78, 30
               

               Conread position:
               47-384
               

               Cow position:
               chr6:619113-619464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               84, 268
               

               Conread position:
               48-255
               

               Cow position:
               chr6:12100159-12100366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               24, 110
               

               Conread position:
               48-284
               

               Cow position:
               chr6:46205591-46205827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 18
               

               Conread position:
               48-370
               

               Cow position:
               chr6:33863328-33863650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               51-216
               

               Cow position:
               chr6:42731945-42731781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               95, 10
               

               Conread position:
               51-290
               

               Cow position:
               chr6:31636119-31635872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               74, 230
               

               Conread position:
               52-221
               

               Cow position:
               chr6:41534209-41534382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               84, 161
               

               Conread position:
               52-244
               

               Cow position:
               chr6:29484688-29484880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               154
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               52-249
               

               Cow position:
               chr6:6100150-6099954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               52-288
               

               Cow position:
               chr6:24125696-24125472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               52-288
               

               Cow position:
               chr6:44578818-44578583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 0
               

               Conread position:
               52-346
               

               Cow position:
               chr6:66513491-66513205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               22, 77
               

               Conread position:
               52-347
               

               Cow position:
               chr6:56842736-56843030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 0
               

               Conread position:
               52-381
               

               Cow position:
               chr6:58747787-58748115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               53-248
               

               Cow position:
               chr6:56885538-56885733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               158
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               93, 83
               

               Conread position:
               53-255
               

               Cow position:
               chr6:66433496-66433695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               158
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               53-259
               

               Cow position:
               chr6:444905-445109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               96, 46
               

               Conread position:
               53-264
               

               Cow position:
               chr6:24988402-24988193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               53-282
               

               Cow position:
               chr6:65870604-65870830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               53-328
               

               Cow position:
               chr6:35180765-35180485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               76, 115
               

               Conread position:
               53-346
               

               Cow position:
               chr6:33177016-33176732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               216, 67
               

               Conread position:
               53-480
               

               Cow position:
               chr6:24781992-24781550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 233
               

               Conread position:
               54-282
               

               Cow position:
               chr6:23891120-23891346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               80, 208
               

               Conread position:
               54-290
               

               Cow position:
               chr6:64039690-64039934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               65, 5
               

               Conread position:
               55-345
               

               Cow position:
               chr6:3561875-3562164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               75, 36
               

               Conread position:
               55-348
               

               Cow position:
               chr6:17935447-17935154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 81
               

               Conread position:
               55-349
               

               Cow position:
               chr6:55266045-55265756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               204
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               55-356
               

               Cow position:
               chr6:27815897-27815616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               96, 12
               

               Conread position:
               56-346
               

               Cow position:
               chr6:41824248-41823956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 224
               

               Conread position:
               58-348
               

               Cow position:
               chr6:6578192-6577902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 78
               

               Conread position:
               59-254
               

               Cow position:
               chr6:53968900-53968702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               70, 18
               

               Conread position:
               59-348
               

               Cow position:
               chr6:53448630-53448920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 241
               

               Conread position:
               59-381
               

               Cow position:
               chr6:51150629-51150949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 77
               

               Conread position:
               60-323
               

               Cow position:
               chr6:64895666-64895932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               70, 141
               

               Conread position:
               60-346
               

               Cow position:
               chr6:62828567-62828288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               62, 95
               

               Conread position:
               61-256
               

               Cow position:
               chr6:39995522-39995328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               46, 75
               

               Conread position:
               61-267
               

               Cow position:
               chr6:40774784-40774581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               61-370
               

               Cow position:
               chr6:31081635-31081943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               62-243
               

               Cow position:
               chr6:240457-240641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               62-340
               

               Cow position:
               chr6:13694003-13693725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               75, 163
               

               Conread position:
               63-210
               

               Cow position:
               chr6:15944113-15943960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               63-356
               

               Cow position:
               chr6:10649437-10649142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               61, 223
               

               Conread position:
               63-490
               

               Cow position:
               chr6:62925413-62924984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               301
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               61, 126
               

               Conread position:
               64-266
               

               Cow position:
               chr6:457893-457692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               146, 13
               

               Conread position:
               67-233
               

               Cow position:
               chr6:49694030-49694192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               67-246
               

               Cow position:
               chr6:51581804-51581623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               67-248
               

               Cow position:
               chr6:46866197-46866021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               67-255
               

               Cow position:
               chr6:43788925-43788744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               67-259
               

               Cow position:
               chr6:49685151-49685342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               151
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               67-272
               

               Cow position:
               chr6:28636437-28636232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               162
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               79, 69
               

               Conread position:
               67-288
               

               Cow position:
               chr6:24327550-24327323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               67-324
               

               Cow position:
               chr6:55205849-55205591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 10
               

               Conread position:
               67-346
               

               Cow position:
               chr6:3017028-3017317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               62, 225
               

               Conread position:
               67-346
               

               Cow position:
               chr6:27942627-27942906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               62, 11
               

               Conread position:
               67-348
               

               Cow position:
               chr6:62323441-62323160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 69
               

               Conread position:
               67-356
               

               Cow position:
               chr6:23003817-23003532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               59, 149
               

               Conread position:
               67-369
               

               Cow position:
               chr6:5751573-5751873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 69
               

               Conread position:
               67-370
               

               Cow position:
               chr6:757963-758267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 70
               

               Conread position:
               67-370
               

               Cow position:
               chr6:19843014-19843317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 69
               

               Conread position:
               67-370
               

               Cow position:
               chr6:31192736-31192432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 69
               

               Conread position:
               67-372
               

               Cow position:
               chr6:44906069-44906383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               12, 203
               

               Conread position:
               67-373
               

               Cow position:
               chr6:40912809-40912507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 69
               

               Conread position:
               67-381
               

               Cow position:
               chr6:2110523-2110212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 149
               

               Conread position:
               67-459
               

               Cow position:
               chr6:66363654-66363263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 300
               

               Conread position:
               67-476
               

               Cow position:
               chr6:17090177-17090599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               270
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               14, 226
               

               Conread position:
               67-479
               

               Cow position:
               chr6:32125658-32126065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 232
               

               Conread position:
               68-308
               

               Cow position:
               chr6:16662529-16662768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               215, 90
               

               Conread position:
               68-310
               

               Cow position:
               chr6:5276075-5275827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 96
               

               Conread position:
               69-284
               

               Cow position:
               chr6:52216162-52215941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               179, 0
               

               Conread position:
               69-284
               

               Cow position:
               chr6:52235653-52235432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               179, 0
               

               Conread position:
               69-370
               

               Cow position:
               chr6:9741910-9742209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 9
               

               Conread position:
               69-501
               

               Cow position:
               chr6:35103728-35103308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 10
               

               Conread position:
               70-288
               

               Cow position:
               chr6:21732517-21732297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               172
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               63, 207
               

               Conread position:
               70-391
               

               Cow position:
               chr6:49399023-49398703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 281
               

               Conread position:
               72-255
               

               Cow position:
               chr6:30473876-30474065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               72-324
               

               Cow position:
               chr6:37331558-37331814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               66, 165
               

               Conread position:
               72-332
               

               Cow position:
               chr6:62979652-62979390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               68, 183
               

               Conread position:
               74-348
               

               Cow position:
               chr6:50802585-50802301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               56, 69
               

               Conread position:
               75-370
               

               Cow position:
               chr6:1910918-1911212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 5
               

               Conread position:
               76-288
               

               Cow position:
               chr6:7994880-7994658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               134, 43
               

               Conread position:
               76-346
               

               Cow position:
               chr6:47441172-47440903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               10, 151
               

               Conread position:
               76-349
               

               Cow position:
               chr6:24652580-24652309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 179
               

               Conread position:
               77-272
               

               Cow position:
               chr6:7111989-7111796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               80, 143
               

               Conread position:
               77-348
               

               Cow position:
               chr6:23426794-23427065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 59
               

               Conread position:
               77-348
               

               Cow position:
               chr6:34842958-34842687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 222
               

               Conread position:
               77-356
               

               Cow position:
               chr6:2405176-2404899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               51, 137
               

               Conread position:
               77-368
               

               Cow position:
               chr6:48290548-48290834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 59
               

               Conread position:
               77-370
               

               Cow position:
               chr6:14225592-14225299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 59
               

               Conread position:
               77-370
               

               Cow position:
               chr6:68340198-68339905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 59
               

               Conread position:
               77-381
               

               Cow position:
               chr6:14690556-14690856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               78-288
               

               Cow position:
               chr6:1293663-1293452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               172, 138
               

               Conread position:
               78-324
               

               Cow position:
               chr6:1866283-1866532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               77, 163
               

               Conread position:
               78-348
               

               Cow position:
               chr6:21004256-21004528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               17, 193
               

               Conread position:
               78-467
               

               Cow position:
               chr6:67430287-67429893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 221
               

               Conread position:
               79-255
               

               Cow position:
               chr6:30159440-30159622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               79-279
               

               Cow position:
               chr6:31927653-31927850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               79-348
               

               Cow position:
               chr6:17364757-17364488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 57
               

               Conread position:
               79-370
               

               Cow position:
               chr6:46371841-46371552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 57
               

               Conread position:
               79-373
               

               Cow position:
               chr6:23117797-23117502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               5, 61
               

               Conread position:
               80-356
               

               Cow position:
               chr6:33302015-33302292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 136
               

               Conread position:
               81-288
               

               Cow position:
               chr6:34549010-34549227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               81-345
               

               Cow position:
               chr6:24965565-24965300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               51, 75
               

               Conread position:
               81-370
               

               Cow position:
               chr6:21719173-21718886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               81-386
               

               Cow position:
               chr6:3157620-3157316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               81-387
               

               Cow position:
               chr6:20056231-20056539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               48, 63
               

               Conread position:
               81-391
               

               Cow position:
               chr6:5367080-5366770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 55
               

               Conread position:
               81-467
               

               Cow position:
               chr6:11721173-11720782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 218
               

               Conread position:
               82-346
               

               Cow position:
               chr6:19427050-19427319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               46, 168
               

               Conread position:
               82-348
               

               Cow position:
               chr6:9008993-9008739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               228, 24
               

               Conread position:
               82-386
               

               Cow position:
               chr6:4948548-4948852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               83-370
               

               Cow position:
               chr6:126351-126064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 53
               

               Conread position:
               83-373
               

               Cow position:
               chr6:32854652-32854373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               59, 25
               

               Conread position:
               83-373
               

               Cow position:
               chr6:37389066-37389356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 53
               

               Conread position:
               83-374
               

               Cow position:
               chr6:68272514-68272230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               198, 102
               

               Conread position:
               84-291
               

               Cow position:
               chr6:31739153-31739366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               166
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               172, 0
               

               Conread position:
               84-370
               

               Cow position:
               chr6:27401474-27401190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 52
               

               Conread position:
               85-232
               

               Cow position:
               chr6:64304015-64303868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               85-362
               

               Cow position:
               chr6:59597266-59597543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               228, 214
               

               Conread position:
               85-370
               

               Cow position:
               chr6:11034498-11034213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 51
               

               Conread position:
               85-373
               

               Cow position:
               chr6:58031732-58032017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 150
               

               Conread position:
               86-255
               

               Cow position:
               chr6:45690999-45690833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               86-288
               

               Cow position:
               chr6:55688661-55688852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               87-291
               

               Cow position:
               chr6:26915994-26916198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               59, 49
               

               Conread position:
               87-348
               

               Cow position:
               chr6:55594007-55594264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               255, 13
               

               Conread position:
               87-370
               

               Cow position:
               chr6:6060946-6060663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 215
               

               Conread position:
               91-256
               

               Cow position:
               chr6:32300944-32300779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               55, 45
               

               Conread position:
               91-288
               

               Cow position:
               chr6:40320310-40320494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               92-243
               

               Cow position:
               chr6:20170756-20170912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               92-252
               

               Cow position:
               chr6:31048933-31048772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               92-254
               

               Cow position:
               chr6:16288840-16288682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               92-259
               

               Cow position:
               chr6:63054288-63054128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               156, 50
               

               Conread position:
               92-269
               

               Cow position:
               chr6:33855433-33855607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               92-285
               

               Cow position:
               chr6:6642969-6642779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               92-288
               

               Cow position:
               chr6:40450391-40450582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               92-340
               

               Cow position:
               chr6:33215756-33215516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               187, 42
               

               Conread position:
               92-342
               

               Cow position:
               chr6:37390625-37390882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               45, 187
               

               Conread position:
               92-348
               

               Cow position:
               chr6:24004157-24004419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               32, 219
               

               Conread position:
               92-348
               

               Cow position:
               chr6:53052345-53052601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 44
               

               Conread position:
               92-370
               

               Cow position:
               chr6:17352237-17351959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 44
               

               Conread position:
               92-370
               

               Cow position:
               chr6:62038161-62038435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 44
               

               Conread position:
               92-370
               

               Cow position:
               chr6:65041216-65040938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 44
               

               Conread position:
               93-290
               

               Cow position:
               chr6:55453106-55452900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               93-370
               

               Cow position:
               chr6:61257630-61257904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               268, 43
               

               Conread position:
               93-370
               

               Cow position:
               chr6:64338005-64337728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 43
               

               Conread position:
               93-468
               

               Cow position:
               chr6:25407787-25407398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               265
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               149, 50
               

               Conread position:
               94-370
               

               Cow position:
               chr6:8207729-8207454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               94-381
               

               Cow position:
               chr6:14631207-14631496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 42
               

               Conread position:
               95-255
               

               Cow position:
               chr6:64314376-64314215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 139
               

               Conread position:
               95-370
               

               Cow position:
               chr6:24237584-24237309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               95-480
               

               Cow position:
               chr6:14958723-14958341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               257
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               162, 85
               

               Conread position:
               95-511
               

               Cow position:
               chr6:65874335-65873920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               277, 71
               

               Conread position:
               96-255
               

               Cow position:
               chr6:14897138-14896985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               96-267
               

               Cow position:
               chr6:46860578-46860409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               96-288
               

               Cow position:
               chr6:180743-180551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               149
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-288
               

               Cow position:
               chr6:68252404-68252596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               158
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-373
               

               Cow position:
               chr6:5944681-5944404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 196
               

               Conread position:
               97-232
               

               Cow position:
               chr6:51525967-51525832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               97-249
               

               Cow position:
               chr6:42566392-42566548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               98-322
               

               Cow position:
               chr6:16706632-16706853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               174
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               192, 137
               

               Conread position:
               98-348
               

               Cow position:
               chr6:33147685-33147931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               189
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               192, 45
               

               Conread position:
               98-356
               

               Cow position:
               chr6:42416465-42416721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               98-367
               

               Cow position:
               chr6:4164769-4164508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               211, 28
               

               Conread position:
               99-370
               

               Cow position:
               chr6:45130300-45130029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               47, 37
               

               Conread position:
               100-221
               

               Cow position:
               chr6:21184184-21184305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               100-261
               

               Cow position:
               chr6:53553118-53553278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               100-288
               

               Cow position:
               chr6:55610614-55610423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               100-370
               

               Cow position:
               chr6:62331293-62331026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               46, 36
               

               Conread position:
               100-459
               

               Cow position:
               chr6:47383626-47383987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               190, 91
               

               Conread position:
               101-243
               

               Cow position:
               chr6:8804918-8804777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               101-321
               

               Cow position:
               chr6:66431464-66431690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               27, 204
               

               Conread position:
               102-370
               

               Cow position:
               chr6:14891206-14890938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               44, 34
               

               Conread position:
               103-288
               

               Cow position:
               chr6:37487675-37487491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               103-357
               

               Cow position:
               chr6:55608185-55607925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               25, 202
               

               Conread position:
               104-288
               

               Cow position:
               chr6:52209296-52209479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               104-348
               

               Cow position:
               chr6:1944358-1944598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               123, 196
               

               Conread position:
               105-341
               

               Cow position:
               chr6:41961342-41961103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 206
               

               Conread position:
               105-356
               

               Cow position:
               chr6:16397553-16397303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               25, 37
               

               Conread position:
               105-384
               

               Cow position:
               chr6:16492277-16492012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               106-269
               

               Cow position:
               chr6:5462645-5462486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               106-370
               

               Cow position:
               chr6:14133587-14133851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               40, 29
               

               Conread position:
               107-284
               

               Cow position:
               chr6:18080885-18080706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               107-288
               

               Cow position:
               chr6:1264240-1264420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               107-373
               

               Cow position:
               chr6:54447803-54447531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               40, 32
               

               Conread position:
               109-254
               

               Cow position:
               chr6:15923592-15923447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               110-370
               

               Cow position:
               chr6:52431399-52431139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               71, 192
               

               Conread position:
               113-288
               

               Cow position:
               chr6:22921024-22921199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               148
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               113-349
               

               Cow position:
               chr6:6569758-6569994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               114-348
               

               Cow position:
               chr6:43604409-43604643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               32, 22
               

               Conread position:
               114-370
               

               Cow position:
               chr6:596098-595842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               115-251
               

               Cow position:
               chr6:28100877-28100741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               116-273
               

               Cow position:
               chr6:47150055-47150213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               65, 42
               

               Conread position:
               119-323
               

               Cow position:
               chr6:12927766-12927967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               191, 105
               

               Conread position:
               119-324
               

               Cow position:
               chr6:16230540-16230736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               200, 114
               

               Conread position:
               119-324
               

               Cow position:
               chr6:62851636-62851432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               42, 144
               

               Conread position:
               119-373
               

               Cow position:
               chr6:2546887-2547137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               119-381
               

               Cow position:
               chr6:50423757-50423500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               119-467
               

               Cow position:
               chr6:875682-875328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               33, 48
               

               Conread position:
               120-292
               

               Cow position:
               chr6:33918495-33918320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               18, 71
               

               Conread position:
               120-319
               

               Cow position:
               chr6:61268979-61269173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               120-346
               

               Cow position:
               chr6:42693011-42693233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               135, 21
               

               Conread position:
               120-347
               

               Cow position:
               chr6:24902492-24902271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               121-246
               

               Cow position:
               chr6:44623129-44623004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               121-373
               

               Cow position:
               chr6:323665-323412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               181, 190
               

               Conread position:
               122-288
               

               Cow position:
               chr6:41162055-41161888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               122-291
               

               Cow position:
               chr6:54963724-54963555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               123-228
               

               Cow position:
               chr6:51398079-51398184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               123-348
               

               Cow position:
               chr6:58761741-58761966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               23, 5
               

               Conread position:
               124-370
               

               Cow position:
               chr6:13605581-13605335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               124-370
               

               Cow position:
               chr6:13619823-13619577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               125-287
               

               Cow position:
               chr6:62592911-62592749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               125-288
               

               Cow position:
               chr6:34608886-34608722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               125-290
               

               Cow position:
               chr6:67968982-67968811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               125-348
               

               Cow position:
               chr6:1957122-1956899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               125-348
               

               Cow position:
               chr6:38053538-38053761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               125-370
               

               Cow position:
               chr6:15882025-15881780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               125-370
               

               Cow position:
               chr6:19737326-19737571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               125-370
               

               Cow position:
               chr6:27939576-27939821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               125-370
               

               Cow position:
               chr6:39797930-39797685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               125-370
               

               Cow position:
               chr6:40710174-40710419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               125-370
               

               Cow position:
               chr6:45210943-45211188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               125-386
               

               Cow position:
               chr6:55582348-55582087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               125-459
               

               Cow position:
               chr6:35842310-35842635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               185, 146
               

               Conread position:
               126-255
               

               Cow position:
               chr6:7157104-7157233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               126-348
               

               Cow position:
               chr6:43389715-43389937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               126-495
               

               Cow position:
               chr6:20231170-20230809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               254
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               184, 8
               

               Conread position:
               127-346
               

               Cow position:
               chr6:37393062-37392847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               157, 141
               

               Conread position:
               128-284
               

               Cow position:
               chr6:15305241-15305394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               128-284
               

               Cow position:
               chr6:47304980-47305135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               128-290
               

               Cow position:
               chr6:12844962-12845131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               128-291
               

               Cow position:
               chr6:21608149-21608306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               128-324
               

               Cow position:
               chr6:59577001-59577196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               185, 126
               

               Conread position:
               128-346
               

               Cow position:
               chr6:2640470-2640244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               13, 89
               

               Conread position:
               128-346
               

               Cow position:
               chr6:48655411-48655200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               14, 31
               

               Conread position:
               128-348
               

               Cow position:
               chr6:48468454-48468675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               87, 172
               

               Conread position:
               128-451
               

               Cow position:
               chr6:10106348-10106019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               107, 175
               

               Conread position:
               128-477
               

               Cow position:
               chr6:63047229-63047580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               182, 72
               

               Conread position:
               128-481
               

               Cow position:
               chr6:35990574-35990230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               249
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               101, 26
               

               Conread position:
               128-483
               

               Cow position:
               chr6:8318514-8318156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               14, 107
               

               Conread position:
               129-348
               

               Cow position:
               chr6:10107303-10107521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               129-348
               

               Cow position:
               chr6:33897573-33897361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               129-370
               

               Cow position:
               chr6:452284-452526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               129-370
               

               Cow position:
               chr6:26925737-26925497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               130-348
               

               Cow position:
               chr6:456835-457058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               71, 55
               

               Conread position:
               131-253
               

               Cow position:
               chr6:67218977-67219099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               131-330
               

               Cow position:
               chr6:58605937-58606137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               137-288
               

               Cow position:
               chr6:66532141-66531989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               137-346
               

               Cow position:
               chr6:14706751-14706545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               150, 25
               

               Conread position:
               142-500
               

               Cow position:
               chr6:50746645-50747012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               37, 25
               

               Conread position:
               143-288
               

               Cow position:
               chr6:35260515-35260660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               143-288
               

               Cow position:
               chr6:37148489-37148633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               143-345
               

               Cow position:
               chr6:55474917-55475115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               143-346
               

               Cow position:
               chr6:54806890-54807093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               142, 155
               

               Conread position:
               143-347
               

               Cow position:
               chr6:44078184-44078392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               106, 31
               

               Conread position:
               143-367
               

               Cow position:
               chr6:28482681-28482906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               17, 152
               

               Conread position:
               143-373
               

               Cow position:
               chr6:28276329-28276557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               150, 11
               

               Conread position:
               143-392
               

               Cow position:
               chr6:17871065-17871314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               147, 156
               

               Conread position:
               143-459
               

               Cow position:
               chr6:36195881-36196192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               220
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               161, 156
               

               Conread position:
               143-477
               

               Cow position:
               chr6:54867186-54867516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               162, 46
               

               Conread position:
               144-254
               

               Cow position:
               chr6:9453144-9453038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               144-269
               

               Cow position:
               chr6:16060104-16059979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               144-284
               

               Cow position:
               chr6:26837716-26837578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               144-287
               

               Cow position:
               chr6:60152704-60152847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               144-345
               

               Cow position:
               chr6:48794337-48794135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               39, 30
               

               Conread position:
               144-391
               

               Cow position:
               chr6:51071372-51071623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               113, 142
               

               Conread position:
               144-490
               

               Cow position:
               chr6:10176630-10176283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               166, 91
               

               Conread position:
               145-287
               

               Cow position:
               chr6:54980771-54980913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-288
               

               Cow position:
               chr6:36603838-36603982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               145-288
               

               Cow position:
               chr6:58589705-58589845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               145-328
               

               Cow position:
               chr6:1228953-1228770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-348
               

               Cow position:
               chr6:57796228-57796025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-349
               

               Cow position:
               chr6:7216501-7216705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-370
               

               Cow position:
               chr6:10536120-10535895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-370
               

               Cow position:
               chr6:34111265-34111040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-370
               

               Cow position:
               chr6:37217437-37217662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-370
               

               Cow position:
               chr6:41033732-41033957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-370
               

               Cow position:
               chr6:43404259-43404484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-370
               

               Cow position:
               chr6:68871110-68870885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-381
               

               Cow position:
               chr6:68663242-68663004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               146-342
               

               Cow position:
               chr6:31151768-31151961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               146-348
               

               Cow position:
               chr6:8526966-8527168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               146-348
               

               Cow position:
               chr6:54140489-54140685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               164, 12
               

               Conread position:
               147-346
               

               Cow position:
               chr6:34924425-34924233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               148-373
               

               Cow position:
               chr6:10459410-10459633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               149-324
               

               Cow position:
               chr6:3936220-3936390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               149-370
               

               Cow position:
               chr6:38776274-38776495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               149-483
               

               Cow position:
               chr6:26728853-26728519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               161, 143
               

               Conread position:
               150-290
               

               Cow position:
               chr6:62808833-62808973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               150-468
               

               Cow position:
               chr6:50446085-50445768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               247, 142
               

               Conread position:
               151-288
               

               Cow position:
               chr6:63716080-63716217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               151-341
               

               Cow position:
               chr6:12934464-12934273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               129, 75
               

               Conread position:
               151-346
               

               Cow position:
               chr6:55387872-55388067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               128, 53
               

               Conread position:
               151-388
               

               Cow position:
               chr6:5672905-5673141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               159, 55
               

               Conread position:
               151-457
               

               Cow position:
               chr6:19681841-19681544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               159, 99
               

               Conread position:
               152-346
               

               Cow position:
               chr6:57685835-57686030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               153-370
               

               Cow position:
               chr6:62578610-62578827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               155-288
               

               Cow position:
               chr6:57597320-57597180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               158-288
               

               Cow position:
               chr6:21302301-21302428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               158-378
               

               Cow position:
               chr6:6239849-6240073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               158-381
               

               Cow position:
               chr6:1538486-1538700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               159-284
               

               Cow position:
               chr6:47625275-47625151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               159-289
               

               Cow position:
               chr6:60859620-60859493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               159-370
               

               Cow position:
               chr6:32054851-32054644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               160-374
               

               Cow position:
               chr6:54841219-54841001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               56, 172
               

               Conread position:
               160-386
               

               Cow position:
               chr6:36299494-36299268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               161-346
               

               Cow position:
               chr6:32461881-32461696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               148, 140
               

               Conread position:
               161-348
               

               Cow position:
               chr6:6117871-6117677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               74, 145
               

               Conread position:
               161-361
               

               Cow position:
               chr6:13345228-13345028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               161-391
               

               Cow position:
               chr6:30285374-30285605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               97, 115
               

               Conread position:
               162-280
               

               Cow position:
               chr6:37468428-37468309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               162-346
               

               Cow position:
               chr6:60344045-60344227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               46, 141
               

               Conread position:
               162-480
               

               Cow position:
               chr6:12500543-12500862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               92, 221
               

               Conread position:
               162-495
               

               Cow position:
               chr6:12337671-12338009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               148, 130
               

               Conread position:
               163-284
               

               Cow position:
               chr6:50042793-50042914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               163-348
               

               Cow position:
               chr6:43014494-43014309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               163-348
               

               Cow position:
               chr6:52308021-52308212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               164-284
               

               Cow position:
               chr6:7010422-7010304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               7, 72
               

               Conread position:
               164-328
               

               Cow position:
               chr6:41052555-41052719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               126, 145
               

               Conread position:
               164-396
               

               Cow position:
               chr6:50527774-50527542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               165-276
               

               Cow position:
               chr6:34693269-34693380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               165-322
               

               Cow position:
               chr6:67044660-67044816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               145, 41
               

               Conread position:
               165-565
               

               Cow position:
               chr6:46557747-46558140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               145, 107
               

               Conread position:
               166-288
               

               Cow position:
               chr6:1104358-1104237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               166-343
               

               Cow position:
               chr6:61452201-61452376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               49, 61
               

               Conread position:
               166-345
               

               Cow position:
               chr6:60467718-60467894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               147, 126
               

               Conread position:
               166-348
               

               Cow position:
               chr6:21587731-21587549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               144, 136
               

               Conread position:
               166-374
               

               Cow position:
               chr6:68127144-68127352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               144, 126
               

               Conread position:
               168-284
               

               Cow position:
               chr6:56596967-56597083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               168-348
               

               Cow position:
               chr6:611260-611433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               142, 9
               

               Conread position:
               172-370
               

               Cow position:
               chr6:21300825-21300627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               173-356
               

               Cow position:
               chr6:45775700-45775518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               141, 107
               

               Conread position:
               173-500
               

               Cow position:
               chr6:31525749-31526067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               137, 62
               

               Conread position:
               175-335
               

               Cow position:
               chr6:41214386-41214545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               176-343
               

               Cow position:
               chr6:53401071-53401236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               134, 82
               

               Conread position:
               177-370
               

               Cow position:
               chr6:12913785-12913592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               179-416
               

               Cow position:
               chr6:23545763-23545527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               180-467
               

               Cow position:
               chr6:12389803-12390090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               208, 91
               

               Conread position:
               184-368
               

               Cow position:
               chr6:38257447-38257263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               184-370
               

               Cow position:
               chr6:47387204-47387392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               184-477
               

               Cow position:
               chr6:54369188-54368900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               126, 52
               

               Conread position:
               186-381
               

               Cow position:
               chr6:20951669-20951864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               191-370
               

               Cow position:
               chr6:41798590-41798411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               192-370
               

               Cow position:
               chr6:13597175-13596998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               194-347
               

               Cow position:
               chr6:6136607-6136761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               194-370
               

               Cow position:
               chr6:32778811-32778635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               196-377
               

               Cow position:
               chr6:60274503-60274324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               197-348
               

               Cow position:
               chr6:56808368-56808217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               197-349
               

               Cow position:
               chr6:21534780-21534932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               113, 102
               

               Conread position:
               199-348
               

               Cow position:
               chr6:32298745-32298596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               94, 100
               

               Conread position:
               199-370
               

               Cow position:
               chr6:44705618-44705447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               199-374
               

               Cow position:
               chr6:1273634-1273458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               81, 95
               

               Conread position:
               200-348
               

               Cow position:
               chr6:54899827-54899975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               200-370
               

               Cow position:
               chr6:25348046-25347876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               203-370
               

               Cow position:
               chr6:1331699-1331532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               203-370
               

               Cow position:
               chr6:62418803-62418636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               203-525
               

               Cow position:
               chr6:54365596-54365284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               69, 78
               

               Conread position:
               204-370
               

               Cow position:
               chr6:43896944-43896778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               207-459
               

               Cow position:
               chr6:35471795-35471539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               102, 89
               
Show alignments to all cow chromosomes.
Conread position:	1-123
Cow position:	chr6:9839454-9839333 (view UCSC Genome Browser custom track)
Alignm length:	124
Alignm identity:	97
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	120, 27
Conread position:	1-252
Cow position:	chr6:16596664-16596917 (view UCSC Genome Browser custom track)
Alignm length:	258
Alignm identity:	179
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	130, 220
Conread position:	1-288
Cow position:	chr6:15046569-15046281 (view UCSC Genome Browser custom track)
Alignm length:	297
Alignm identity:	212
Alignm E-value:	1e-39
Alignm gaps (pig, cow):	121, 188
Conread position:	1-291
Cow position:	chr6:39416855-39417148 (view UCSC Genome Browser custom track)
Alignm length:	300
Alignm identity:	197
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	114, 80
Conread position:	1-298
Cow position:	chr6:4698658-4698353 (view UCSC Genome Browser custom track)
Alignm length:	309
Alignm identity:	212
Alignm E-value:	6e-35
Alignm gaps (pig, cow):	73, 168
Conread position:	1-322
Cow position:	chr6:6187791-6188099 (view UCSC Genome Browser custom track)
Alignm length:	324
Alignm identity:	224
Alignm E-value:	2e-37
Alignm gaps (pig, cow):	71, 25
Conread position:	1-324
Cow position:	chr6:25783830-25784160 (view UCSC Genome Browser custom track)
Alignm length:	334
Alignm identity:	239
Alignm E-value:	0
Alignm gaps (pig, cow):	24, 287
Conread position:	1-370
Cow position:	chr6:31568172-31567805 (view UCSC Genome Browser custom track)
Alignm length:	371
Alignm identity:	230
Alignm E-value:	0
Alignm gaps (pig, cow):	148, 7
Conread position:	1-384
Cow position:	chr6:48946845-48946463 (view UCSC Genome Browser custom track)
Alignm length:	390
Alignm identity:	259
Alignm E-value:	3e-40
Alignm gaps (pig, cow):	114, 217
Conread position:	2-117
Cow position:	chr6:9025571-9025686 (view UCSC Genome Browser custom track)
Alignm length:	116
Alignm identity:	92
Alignm E-value:	5e-23
Alignm gaps (pig, cow):	0, 0
Conread position:	2-130
Cow position:	chr6:25178649-25178518 (view UCSC Genome Browser custom track)
Alignm length:	132
Alignm identity:	109
Alignm E-value:	9e-29
Alignm gaps (pig, cow):	117, 0
Conread position:	2-131
Cow position:	chr6:6160250-6160379 (view UCSC Genome Browser custom track)
Alignm length:	130
Alignm identity:	99
Alignm E-value:	5e-23
Alignm gaps (pig, cow):	0, 0
Conread position:	2-132
Cow position:	chr6:40137729-40137599 (view UCSC Genome Browser custom track)
Alignm length:	131
Alignm identity:	102
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	0, 0
Conread position:	2-172
Cow position:	chr6:208678-208847 (view UCSC Genome Browser custom track)
Alignm length:	174
Alignm identity:	125
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	141, 54
Conread position:	2-175
Cow position:	chr6:22225325-22225150 (view UCSC Genome Browser custom track)
Alignm length:	177
Alignm identity:	133
Alignm E-value:	3e-29
Alignm gaps (pig, cow):	45, 157
Conread position:	2-191
Cow position:	chr6:38896346-38896157 (view UCSC Genome Browser custom track)
Alignm length:	191
Alignm identity:	147
Alignm E-value:	8e-38
Alignm gaps (pig, cow):	127, 136
Conread position:	2-205
Cow position:	chr6:14148260-14148467 (view UCSC Genome Browser custom track)
Alignm length:	210
Alignm identity:	153
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	127, 65
Conread position:	2-217
Cow position:	chr6:59277676-59277454 (view UCSC Genome Browser custom track)
Alignm length:	223
Alignm identity:	155
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	100, 0
Conread position:	2-221
Cow position:	chr6:13406008-13406234 (view UCSC Genome Browser custom track)
Alignm length:	228
Alignm identity:	162
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	72, 57
Conread position:	2-225
Cow position:	chr6:143832-143610 (view UCSC Genome Browser custom track)
Alignm length:	225
Alignm identity:	165
Alignm E-value:	8e-38
Alignm gaps (pig, cow):	149, 50