Cow genome map

Conread name: Ss1.1-MPL-MPL384_8_I21.5

Conread position: 1-122
Cow position: chr9:42901845-42901724 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-224
Cow position: chr9:44553322-44553091 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 177
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-228
Cow position: chr9:8163064-8162832 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 139, 66

Conread position: 1-233
Cow position: chr9:2910638-2910402 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 125, 77

Conread position: 1-249
Cow position: chr9:8656845-8657111 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 1-249
Cow position: chr9:64105536-64105282 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 124, 0

Conread position: 1-256
Cow position: chr9:61236849-61236589 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 59, 72

Conread position: 1-259
Cow position: chr9:33659025-33658772 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 144, 166

Conread position: 1-261
Cow position: chr9:8951452-8951208 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 79, 133

Conread position: 1-284
Cow position: chr9:2863973-2863691 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 46, 176

Conread position: 1-287
Cow position: chr9:45942968-45942683 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 188
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 55, 49

Conread position: 1-346
Cow position: chr9:33669269-33668906 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 245
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 131, 0

Conread position: 1-346
Cow position: chr9:43038056-43037682 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 242
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 1-346
Cow position: chr9:53641233-53640896 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 222
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 124, 66

Conread position: 1-387
Cow position: chr9:44518105-44517721 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 282

Conread position: 1-391
Cow position: chr9:49301722-49301333 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 263
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 131, 47

Conread position: 2-121
Cow position: chr9:23527332-23527452 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 2-123
Cow position: chr9:11156072-11155951 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-131
Cow position: chr9:34568242-34568370 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 2-132
Cow position: chr9:422763-422633 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-180
Cow position: chr9:30648805-30648621 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 61

Conread position: 2-191
Cow position: chr9:371629-371436 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 123, 65

Conread position: 2-192
Cow position: chr9:44218445-44218648 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 72, 0

Conread position: 2-200
Cow position: chr9:5327761-5327565 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 19, 0

Conread position: 2-201
Cow position: chr9:3582165-3582364 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 126, 70

Conread position: 2-201
Cow position: chr9:25617464-25617256 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 200

Conread position: 2-209
Cow position: chr9:32728119-32728331 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 119, 65

Conread position: 2-210
Cow position: chr9:47836379-47836593 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 90, 75

Conread position: 2-212
Cow position: chr9:63555907-63555698 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 195

Conread position: 2-219
Cow position: chr9:3844520-3844740 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 132, 0

Conread position: 2-219
Cow position: chr9:7619476-7619696 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 125, 50

Conread position: 2-219
Cow position: chr9:31092347-31092124 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 122, 0

Conread position: 2-224
Cow position: chr9:5030330-5030105 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 96, 26

Conread position: 2-228
Cow position: chr9:20897648-20897420 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 74, 47

Conread position: 2-228
Cow position: chr9:35225421-35225189 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 114, 0

Conread position: 2-232
Cow position: chr9:19568195-19567959 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 51, 66

Conread position: 2-234
Cow position: chr9:31341949-31341716 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 92

Conread position: 2-241
Cow position: chr9:47263638-47263881 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 139, 0

Conread position: 2-242
Cow position: chr9:8600194-8599933 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 68, 0

Conread position: 2-245
Cow position: chr9:27009967-27009727 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 123, 141

Conread position: 2-246
Cow position: chr9:8600907-8600654 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 51, 0

Conread position: 2-246
Cow position: chr9:53531297-53531546 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 128, 211

Conread position: 2-247
Cow position: chr9:31062282-31062532 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 134, 61

Conread position: 2-247
Cow position: chr9:33077759-33078011 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 80, 12

Conread position: 2-248
Cow position: chr9:43643048-43642801 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 168
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 68

Conread position: 2-253
Cow position: chr9:53614928-53614671 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 72, 26

Conread position: 2-254
Cow position: chr9:37098389-37098642 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 117, 46

Conread position: 2-254
Cow position: chr9:49653134-49652877 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 47, 214

Conread position: 2-255
Cow position: chr9:10665493-10665748 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 137, 35

Conread position: 2-255
Cow position: chr9:31406351-31406092 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 130, 240

Conread position: 2-277
Cow position: chr9:24730390-24730114 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 185
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 125, 65

Conread position: 2-284
Cow position: chr9:3932507-3932228 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 19

Conread position: 2-284
Cow position: chr9:15987621-15987889 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 127, 70

Conread position: 2-284
Cow position: chr9:26555657-26555934 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 113, 65

Conread position: 2-284
Cow position: chr9:51691997-51691714 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 76

Conread position: 2-288
Cow position: chr9:2223246-2223526 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 51, 92

Conread position: 2-289
Cow position: chr9:5864187-5864472 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 117, 257

Conread position: 2-289
Cow position: chr9:9649805-9650098 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 124, 254

Conread position: 2-289
Cow position: chr9:17816788-17817085 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 120, 26

Conread position: 2-289
Cow position: chr9:20238497-20238218 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 140, 75

Conread position: 2-321
Cow position: chr9:13303854-13304176 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 72, 46

Conread position: 2-322
Cow position: chr9:41932617-41932293 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 255

Conread position: 2-324
Cow position: chr9:4859093-4858755 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 260

Conread position: 2-324
Cow position: chr9:32265858-32266170 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 123, 33

Conread position: 2-325
Cow position: chr9:3439093-3439414 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 221
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 84, 52

Conread position: 2-325
Cow position: chr9:15501994-15501664 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 145

Conread position: 2-328
Cow position: chr9:9889737-9890058 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 221
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 141, 75

Conread position: 2-329
Cow position: chr9:20817317-20817648 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 215
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 124, 258

Conread position: 2-329
Cow position: chr9:21462296-21462625 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 218

Conread position: 2-341
Cow position: chr9:62719908-62720259 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 227
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 31

Conread position: 2-344
Cow position: chr9:14343471-14343119 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 236
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 72, 288

Conread position: 2-345
Cow position: chr9:32396494-32396147 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 122, 88

Conread position: 2-345
Cow position: chr9:62793649-62793302 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 217
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 47

Conread position: 2-346
Cow position: chr9:3724531-3724862 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 237
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 128, 65

Conread position: 2-346
Cow position: chr9:8099281-8099623 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 50

Conread position: 2-346
Cow position: chr9:9200180-9200526 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 79

Conread position: 2-346
Cow position: chr9:11286299-11285951 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 250
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 21, 197

Conread position: 2-346
Cow position: chr9:25011311-25010960 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 240
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 121, 70

Conread position: 2-346
Cow position: chr9:35592533-35592184 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 306

Conread position: 2-346
Cow position: chr9:39371167-39370814 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 242
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 123, 46

Conread position: 2-346
Cow position: chr9:49683313-49682962 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 232
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 133, 61

Conread position: 2-346
Cow position: chr9:59529770-59530111 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 40

Conread position: 2-346
Cow position: chr9:62763748-62763397 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 253
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 55, 176

Conread position: 2-348
Cow position: chr9:32408919-32408568 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 19, 116

Conread position: 2-348
Cow position: chr9:34310585-34310231 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 296

Conread position: 2-348
Cow position: chr9:44579620-44579271 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 19

Conread position: 2-350
Cow position: chr9:20320311-20320662 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 242
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 127, 65

Conread position: 2-356
Cow position: chr9:5886794-5886442 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 271

Conread position: 2-370
Cow position: chr9:64453576-64453945 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 247
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 85, 65

Conread position: 2-372
Cow position: chr9:50872874-50872490 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 264
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 84, 124

Conread position: 2-391
Cow position: chr9:42956895-42956515 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 270
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 43, 207

Conread position: 3-112
Cow position: chr9:15215119-15215228 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-117
Cow position: chr9:20810290-20810405 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 3-126
Cow position: chr9:12162205-12162328 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 108

Conread position: 3-131
Cow position: chr9:33823651-33823523 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 3-134
Cow position: chr9:5452034-5451903 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-134
Cow position: chr9:16639880-16640010 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 3-134
Cow position: chr9:20417246-20417115 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-134
Cow position: chr9:27107368-27107499 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-147
Cow position: chr9:3060794-3060938 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-153
Cow position: chr9:5345805-5345655 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 3-153
Cow position: chr9:24887801-24887651 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 69, 84

Conread position: 3-153
Cow position: chr9:37908454-37908604 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 143, 133

Conread position: 3-167
Cow position: chr9:26087405-26087239 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 3-168
Cow position: chr9:3717969-3718134 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 143, 133

Conread position: 3-168
Cow position: chr9:32229087-32228923 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 133, 0

Conread position: 3-168
Cow position: chr9:44264496-44264332 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 143, 133

Conread position: 3-171
Cow position: chr9:34957301-34957462 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 19

Conread position: 3-174
Cow position: chr9:5500226-5500048 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 3-177
Cow position: chr9:3311892-3312066 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 143, 133

Conread position: 3-178
Cow position: chr9:41054449-41054628 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 122, 138

Conread position: 3-180
Cow position: chr9:9120045-9119868 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 143, 133

Conread position: 3-185
Cow position: chr9:26171569-26171751 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-186
Cow position: chr9:8187717-8187534 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 3-192
Cow position: chr9:6549290-6549101 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 151
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 143, 133

Conread position: 3-195
Cow position: chr9:50841052-50841243 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 133, 0

Conread position: 3-195
Cow position: chr9:59541032-59541221 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 39, 0

Conread position: 3-198
Cow position: chr9:34879209-34879405 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 69, 134

Conread position: 3-205
Cow position: chr9:45383829-45384031 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 159
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 3-205
Cow position: chr9:46524607-46524403 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 125, 73

Conread position: 3-206
Cow position: chr9:48794690-48794487 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-209
Cow position: chr9:18243377-18243171 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-210
Cow position: chr9:51011114-51011320 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 3-211
Cow position: chr9:64025240-64025023 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 104

Conread position: 3-212
Cow position: chr9:36844340-36844126 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 119, 39

Conread position: 3-213
Cow position: chr9:12566902-12566687 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 121, 74

Conread position: 3-215
Cow position: chr9:59495578-59495366 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-224
Cow position: chr9:36829446-36829231 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 3-228
Cow position: chr9:18343516-18343292 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 198, 0

Conread position: 3-233
Cow position: chr9:29625251-29625480 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 95

Conread position: 3-233
Cow position: chr9:31587449-31587683 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 100, 227

Conread position: 3-233
Cow position: chr9:33067759-33067529 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 61

Conread position: 3-233
Cow position: chr9:56531397-56531167 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-234
Cow position: chr9:58133426-58133661 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 125, 48

Conread position: 3-242
Cow position: chr9:52632973-52633207 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 134, 111

Conread position: 3-244
Cow position: chr9:9405486-9405715 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 93, 0

Conread position: 3-245
Cow position: chr9:9402624-9402861 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 125, 0

Conread position: 3-246
Cow position: chr9:25958997-25958753 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 0

Conread position: 3-247
Cow position: chr9:49292548-49292792 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-247
Cow position: chr9:58615088-58614845 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 25

Conread position: 3-248
Cow position: chr9:10143891-10144137 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 3-248
Cow position: chr9:34689047-34689289 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 82

Conread position: 3-249
Cow position: chr9:17309993-17310244 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 76, 50

Conread position: 3-249
Cow position: chr9:55983185-55983434 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 208

Conread position: 3-251
Cow position: chr9:22439972-22440209 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 32, 0

Conread position: 3-253
Cow position: chr9:19266606-19266861 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 33, 116

Conread position: 3-253
Cow position: chr9:42172323-42172569 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 123, 0

Conread position: 3-254
Cow position: chr9:1983964-1984215 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-254
Cow position: chr9:2119492-2119737 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 134, 62

Conread position: 3-254
Cow position: chr9:4191923-4192174 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-254
Cow position: chr9:23004991-23004757 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 79, 0

Conread position: 3-255
Cow position: chr9:2978053-2977805 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 0

Conread position: 3-255
Cow position: chr9:17905216-17905469 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 3-256
Cow position: chr9:29825851-29825600 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 100

Conread position: 3-259
Cow position: chr9:38546946-38546690 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 55, 7

Conread position: 3-260
Cow position: chr9:56739842-56740105 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 121, 79

Conread position: 3-262
Cow position: chr9:4861972-4861708 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 122, 45

Conread position: 3-268
Cow position: chr9:17871263-17871527 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 45

Conread position: 3-269
Cow position: chr9:4631010-4630762 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 200
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 27, 0

Conread position: 3-269
Cow position: chr9:54789568-54789299 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 52

Conread position: 3-269
Cow position: chr9:61846142-61846397 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 3-283
Cow position: chr9:4939888-4939608 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-284
Cow position: chr9:6305350-6305630 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-284
Cow position: chr9:48773872-48773585 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 3-284
Cow position: chr9:54458526-54458247 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 119

Conread position: 3-284
Cow position: chr9:59161502-59161222 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 0

Conread position: 3-285
Cow position: chr9:9780343-9780059 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 135

Conread position: 3-285
Cow position: chr9:30281416-30281122 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 227
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 85, 38

Conread position: 3-287
Cow position: chr9:11841554-11841270 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-287
Cow position: chr9:31416910-31416625 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-287
Cow position: chr9:37510554-37510275 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 0

Conread position: 3-288
Cow position: chr9:5839537-5839242 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 3-288
Cow position: chr9:10634488-10634761 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 3-288
Cow position: chr9:12389289-12389008 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 123, 36

Conread position: 3-288
Cow position: chr9:13471986-13471706 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 3-288
Cow position: chr9:16218106-16218386 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 3-288
Cow position: chr9:20901595-20901880 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 18

Conread position: 3-288
Cow position: chr9:22471624-22471339 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 12, 141

Conread position: 3-288
Cow position: chr9:35129366-35129080 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 0

Conread position: 3-288
Cow position: chr9:39971576-39971290 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 3-288
Cow position: chr9:46237649-46237359 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 190
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 123, 80

Conread position: 3-288
Cow position: chr9:49982563-49982840 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 0

Conread position: 3-288
Cow position: chr9:51078318-51078591 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 193
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 3-288
Cow position: chr9:60590388-60590675 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 3-289
Cow position: chr9:54049142-54048855 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 75, 255

Conread position: 3-290
Cow position: chr9:3959596-3959308 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 126, 64

Conread position: 3-290
Cow position: chr9:11097479-11097760 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 3-290
Cow position: chr9:36446167-36445876 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 3-291
Cow position: chr9:1100190-1100478 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-291
Cow position: chr9:15670457-15670745 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-291
Cow position: chr9:22732671-22732383 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-292
Cow position: chr9:54473676-54473387 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-297
Cow position: chr9:19743520-19743224 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 18

Conread position: 3-322
Cow position: chr9:35904212-35904528 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 50

Conread position: 3-322
Cow position: chr9:44500302-44500616 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 3-324
Cow position: chr9:648313-647997 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 45

Conread position: 3-324
Cow position: chr9:5524732-5524413 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 232

Conread position: 3-324
Cow position: chr9:11477654-11477331 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 134

Conread position: 3-324
Cow position: chr9:18252388-18252702 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 232

Conread position: 3-324
Cow position: chr9:21459620-21459936 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 176

Conread position: 3-324
Cow position: chr9:24873369-24873070 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 69, 45

Conread position: 3-324
Cow position: chr9:30162738-30162425 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 3-324
Cow position: chr9:38421472-38421800 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 234
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 81, 45

Conread position: 3-324
Cow position: chr9:46316247-46316567 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 74

Conread position: 3-328
Cow position: chr9:1846472-1846794 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 136

Conread position: 3-328
Cow position: chr9:4304892-4304582 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 235
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 71, 131

Conread position: 3-337
Cow position: chr9:51773578-51773243 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-343
Cow position: chr9:7634805-7634469 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 139

Conread position: 3-343
Cow position: chr9:11299149-11299494 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 93

Conread position: 3-344
Cow position: chr9:18407308-18406961 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 221
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 65

Conread position: 3-346
Cow position: chr9:125912-125569 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-346
Cow position: chr9:11146122-11146456 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 243
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 86, 45

Conread position: 3-346
Cow position: chr9:16010781-16010431 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 235
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 119, 309

Conread position: 3-346
Cow position: chr9:19382878-19382522 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 250
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 77, 168

Conread position: 3-346
Cow position: chr9:34132074-34131740 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 216
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 279, 25

Conread position: 3-346
Cow position: chr9:42628136-42628474 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 122, 223

Conread position: 3-346
Cow position: chr9:47079118-47079466 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 217
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 81

Conread position: 3-346
Cow position: chr9:59197453-59197791 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 53

Conread position: 3-347
Cow position: chr9:37017426-37017082 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-347
Cow position: chr9:59386254-59386579 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 245
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 69, 98

Conread position: 3-348
Cow position: chr9:2676444-2676095 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 39

Conread position: 3-348
Cow position: chr9:3744420-3744765 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-348
Cow position: chr9:5861714-5862068 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 252
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 51

Conread position: 3-348
Cow position: chr9:7384622-7384967 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr9:8154717-8154376 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 3-348
Cow position: chr9:12275495-12275150 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr9:17410647-17410987 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 0

Conread position: 3-348
Cow position: chr9:18008318-18008670 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 240

Conread position: 3-348
Cow position: chr9:19222500-19222844 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr9:27994252-27993907 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr9:28244895-28244550 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr9:28293072-28292727 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr9:28746984-28747325 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-348
Cow position: chr9:28948401-28948049 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 134

Conread position: 3-348
Cow position: chr9:29338494-29338836 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 156

Conread position: 3-348
Cow position: chr9:29534425-29534770 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr9:32236801-32236457 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr9:35101420-35101064 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 76, 7

Conread position: 3-348
Cow position: chr9:36025499-36025154 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr9:44920871-44921209 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 120

Conread position: 3-348
Cow position: chr9:50694815-50695160 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr9:55796268-55795955 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 240
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 98, 26

Conread position: 3-348
Cow position: chr9:56529948-56529603 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr9:56530806-56530461 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-348
Cow position: chr9:62817615-62817269 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 134

Conread position: 3-349
Cow position: chr9:5069650-5069316 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 58

Conread position: 3-349
Cow position: chr9:13186185-13186530 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 219

Conread position: 3-349
Cow position: chr9:25969890-25969541 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 138

Conread position: 3-349
Cow position: chr9:30187311-30187656 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 64

Conread position: 3-349
Cow position: chr9:34523763-34523416 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 18

Conread position: 3-349
Cow position: chr9:49689467-49689132 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 236
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 154, 189

Conread position: 3-356
Cow position: chr9:18139764-18140105 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 122

Conread position: 3-356
Cow position: chr9:64344479-64344827 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 62, 162

Conread position: 3-363
Cow position: chr9:9817436-9817087 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 255
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 249, 176

Conread position: 3-366
Cow position: chr9:1855817-1855459 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 36

Conread position: 3-366
Cow position: chr9:39302947-39302583 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-367
Cow position: chr9:19546124-19546488 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-368
Cow position: chr9:13313148-13313513 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-369
Cow position: chr9:3004739-3004367 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 137

Conread position: 3-369
Cow position: chr9:18427274-18426904 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 137

Conread position: 3-369
Cow position: chr9:51780095-51779729 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:174169-173802 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr9:198936-198570 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 232

Conread position: 3-370
Cow position: chr9:771643-771277 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 3-370
Cow position: chr9:874259-874627 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 64

Conread position: 3-370
Cow position: chr9:1062090-1061724 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:1070678-1070313 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:1838557-1838924 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:2394019-2393652 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:2682094-2682456 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 3-370
Cow position: chr9:2715480-2715114 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:2857449-2857816 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:3058022-3057655 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:3997167-3996798 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 103

Conread position: 3-370
Cow position: chr9:6887184-6887553 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 0

Conread position: 3-370
Cow position: chr9:7103625-7103258 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 133

Conread position: 3-370
Cow position: chr9:7830289-7829926 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 0

Conread position: 3-370
Cow position: chr9:9093708-9093341 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:9567093-9566728 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:9611281-9610914 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:10284166-10283813 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:10803278-10803642 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:10919008-10919375 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:11057321-11056956 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 34

Conread position: 3-370
Cow position: chr9:11750838-11750465 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 133

Conread position: 3-370
Cow position: chr9:12379051-12379418 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:12545701-12546066 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:13620391-13620024 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:14591747-14592115 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 0

Conread position: 3-370
Cow position: chr9:15014038-15014399 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 20

Conread position: 3-370
Cow position: chr9:15843024-15843390 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 92

Conread position: 3-370
Cow position: chr9:17018360-17018727 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr9:17296500-17296130 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 140

Conread position: 3-370
Cow position: chr9:17617181-17617548 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 344

Conread position: 3-370
Cow position: chr9:23000611-23000978 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:25239921-25239558 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 108

Conread position: 3-370
Cow position: chr9:25597186-25597561 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:25645474-25645107 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:25701587-25701223 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 107

Conread position: 3-370
Cow position: chr9:25997039-25996670 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 64

Conread position: 3-370
Cow position: chr9:26431564-26431197 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:26518292-26518661 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:26718682-26719049 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:28681806-28682173 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:28785947-28786313 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:29082961-29082593 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 0

Conread position: 3-370
Cow position: chr9:29516282-29515915 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:30118580-30118214 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 135

Conread position: 3-370
Cow position: chr9:30334460-30334094 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:31361567-31361200 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:32495856-32495492 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 45

Conread position: 3-370
Cow position: chr9:34238149-34237783 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 3-370
Cow position: chr9:35304352-35304719 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:37108712-37109079 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:37251618-37251985 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:41145979-41145612 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:41313338-41313705 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr9:42357597-42357230 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:42475481-42475114 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:42696574-42696941 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:43494654-43495021 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:44202474-44202119 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 110

Conread position: 3-370
Cow position: chr9:44211110-44211477 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:44269119-44268753 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:46627916-46628283 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:46667177-46666816 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 18

Conread position: 3-370
Cow position: chr9:46682999-46683362 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 27

Conread position: 3-370
Cow position: chr9:46875209-46874842 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:47045553-47045920 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:47171659-47172029 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:47799698-47799331 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 234

Conread position: 3-370
Cow position: chr9:49073498-49073126 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 138

Conread position: 3-370
Cow position: chr9:49434053-49434420 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:49872843-49872475 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:50327307-50327674 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr9:50519828-50519457 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 3-370
Cow position: chr9:50900044-50899679 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 74

Conread position: 3-370
Cow position: chr9:53564882-53565249 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:55886631-55886268 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 3-370
Cow position: chr9:56177480-56177845 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:56300989-56300625 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 3-370
Cow position: chr9:60410008-60410375 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:60554157-60554524 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:62075404-62075784 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 132

Conread position: 3-370
Cow position: chr9:63564095-63564462 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-370
Cow position: chr9:64011624-64011262 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 3-370
Cow position: chr9:64014260-64013898 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 3-370
Cow position: chr9:64017612-64017231 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-372
Cow position: chr9:45974733-45974368 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 260
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 181, 64

Conread position: 3-373
Cow position: chr9:1296311-1295941 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-373
Cow position: chr9:2707875-2707519 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-373
Cow position: chr9:13181515-13181884 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 255

Conread position: 3-373
Cow position: chr9:17879537-17879906 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 134

Conread position: 3-373
Cow position: chr9:22623545-22623175 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-373
Cow position: chr9:33056365-33055989 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 81

Conread position: 3-373
Cow position: chr9:52407704-52407342 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 135

Conread position: 3-374
Cow position: chr9:54413025-54412654 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-374
Cow position: chr9:54996229-54996597 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 207

Conread position: 3-379
Cow position: chr9:39681900-39681523 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 298

Conread position: 3-379
Cow position: chr9:53607852-53608225 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 0

Conread position: 3-381
Cow position: chr9:1990948-1990567 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 58

Conread position: 3-381
Cow position: chr9:9682068-9681690 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-382
Cow position: chr9:37254010-37254389 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-386
Cow position: chr9:10643332-10642945 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-386
Cow position: chr9:14003582-14003964 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-386
Cow position: chr9:20092249-20092633 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-386
Cow position: chr9:38676282-38676665 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-388
Cow position: chr9:5269098-5268713 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 11

Conread position: 3-388
Cow position: chr9:13994719-13994347 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 113

Conread position: 3-388
Cow position: chr9:34696754-34697136 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 277

Conread position: 3-388
Cow position: chr9:47499658-47500046 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 64

Conread position: 3-391
Cow position: chr9:27936132-27936514 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 103

Conread position: 3-391
Cow position: chr9:50002468-50002081 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-391
Cow position: chr9:62668946-62668556 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 162

Conread position: 3-395
Cow position: chr9:9723342-9723730 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 3-453
Cow position: chr9:22617160-22616719 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 3-459
Cow position: chr9:3807198-3807652 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 232

Conread position: 3-459
Cow position: chr9:17740406-17740859 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 167

Conread position: 3-459
Cow position: chr9:32812876-32812433 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 130

Conread position: 3-459
Cow position: chr9:62442832-62442379 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 299

Conread position: 3-468
Cow position: chr9:5510266-5509800 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 299

Conread position: 3-476
Cow position: chr9:44466811-44467282 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 70

Conread position: 3-477
Cow position: chr9:20988899-20989388 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 324
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 30, 245

Conread position: 3-478
Cow position: chr9:24726137-24726611 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 193

Conread position: 3-480
Cow position: chr9:7410321-7409842 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 167

Conread position: 3-483
Cow position: chr9:1950455-1949981 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 41

Conread position: 3-483
Cow position: chr9:19539637-19539153 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 387, 189

Conread position: 3-490
Cow position: chr9:24996957-24997465 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 310

Conread position: 3-492
Cow position: chr9:34000071-34000569 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 112

Conread position: 3-492
Cow position: chr9:55074596-55075081 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 18

Conread position: 3-493
Cow position: chr9:29007109-29006612 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 303

Conread position: 3-495
Cow position: chr9:54997501-54997980 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 323
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 405, 79

Conread position: 3-496
Cow position: chr9:64050019-64050511 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 166

Conread position: 3-497
Cow position: chr9:6089645-6089139 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 190

Conread position: 3-498
Cow position: chr9:5501381-5500904 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 110

Conread position: 3-498
Cow position: chr9:44821763-44822259 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 84

Conread position: 3-500
Cow position: chr9:30401874-30402376 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 303

Conread position: 3-501
Cow position: chr9:8998884-8998398 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 73

Conread position: 3-502
Cow position: chr9:44914572-44915044 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 156

Conread position: 3-519
Cow position: chr9:22361555-22361041 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 246

Conread position: 3-522
Cow position: chr9:37173799-37173278 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 3-525
Cow position: chr9:15805383-15805898 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 193

Conread position: 3-525
Cow position: chr9:45756904-45756388 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 142

Conread position: 3-559
Cow position: chr9:22243066-22242510 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 133

Conread position: 4-120
Cow position: chr9:9640549-9640665 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 4-128
Cow position: chr9:51743572-51743696 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 4-167
Cow position: chr9:51929238-51929072 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 132, 82

Conread position: 4-172
Cow position: chr9:33026176-33026349 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 118, 0

Conread position: 4-225
Cow position: chr9:27050752-27050979 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 130, 0

Conread position: 4-228
Cow position: chr9:23540903-23541128 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 4-233
Cow position: chr9:26088904-26088662 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 31, 88

Conread position: 4-243
Cow position: chr9:3075743-3075988 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 130, 106

Conread position: 4-244
Cow position: chr9:5400304-5400064 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 4-245
Cow position: chr9:1429349-1429104 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 129, 38

Conread position: 4-248
Cow position: chr9:20900574-20900818 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-249
Cow position: chr9:18072087-18072327 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 4-249
Cow position: chr9:25993369-25993122 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 118, 55

Conread position: 4-251
Cow position: chr9:29330115-29330356 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 24, 64

Conread position: 4-253
Cow position: chr9:60459811-60459559 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 114, 236

Conread position: 4-284
Cow position: chr9:53110060-53109783 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 4-285
Cow position: chr9:47926450-47926166 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 210
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 126, 73

Conread position: 4-287
Cow position: chr9:55425440-55425723 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-288
Cow position: chr9:1464238-1463955 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 63

Conread position: 4-288
Cow position: chr9:39428267-39428553 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 121, 73

Conread position: 4-288
Cow position: chr9:39430703-39430987 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 124, 38

Conread position: 4-289
Cow position: chr9:29361898-29362180 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 64

Conread position: 4-290
Cow position: chr9:48755592-48755872 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 195
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 64

Conread position: 4-324
Cow position: chr9:3722332-3722644 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 218
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 128, 61

Conread position: 4-324
Cow position: chr9:24428071-24428397 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 231

Conread position: 4-324
Cow position: chr9:41999719-42000039 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 307

Conread position: 4-324
Cow position: chr9:61739448-61739138 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 55, 70

Conread position: 4-330
Cow position: chr9:62906951-62907273 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 195
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 89, 28

Conread position: 4-335
Cow position: chr9:26992640-26992965 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 4-346
Cow position: chr9:10127124-10127469 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 241
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 108, 45

Conread position: 4-346
Cow position: chr9:10675987-10676327 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 234
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 120, 92

Conread position: 4-347
Cow position: chr9:6952626-6952288 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 190

Conread position: 4-347
Cow position: chr9:23388137-23388480 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 231

Conread position: 4-348
Cow position: chr9:9443057-9443400 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 252
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 46, 74

Conread position: 4-348
Cow position: chr9:55651575-55651218 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 240
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 116, 63

Conread position: 4-349
Cow position: chr9:13221357-13221697 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 132

Conread position: 4-370
Cow position: chr9:17060751-17060385 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-370
Cow position: chr9:34070341-34070707 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 250
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 120, 179

Conread position: 4-370
Cow position: chr9:43225302-43224937 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 132

Conread position: 4-373
Cow position: chr9:6253171-6253539 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 68

Conread position: 4-373
Cow position: chr9:10326840-10327210 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 4-388
Cow position: chr9:26478096-26477720 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 22

Conread position: 4-459
Cow position: chr9:15982541-15982996 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 223

Conread position: 4-491
Cow position: chr9:38960895-38961380 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 297

Conread position: 4-501
Cow position: chr9:1997672-1997186 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 146

Conread position: 5-153
Cow position: chr9:26056573-26056722 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 143, 62

Conread position: 5-165
Cow position: chr9:12847706-12847547 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 128, 0

Conread position: 5-167
Cow position: chr9:18506221-18506059 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 5-167
Cow position: chr9:40142752-40142590 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 5-168
Cow position: chr9:16179192-16179351 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 5-200
Cow position: chr9:17634096-17634284 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 158
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 31, 0

Conread position: 5-200
Cow position: chr9:30675677-30675872 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 5-201
Cow position: chr9:1570190-1570005 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 5-204
Cow position: chr9:36483420-36483222 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 158
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 104, 0

Conread position: 5-213
Cow position: chr9:23297320-23297107 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 120, 62

Conread position: 5-219
Cow position: chr9:36089165-36089385 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 65, 32

Conread position: 5-223
Cow position: chr9:44617462-44617241 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 136

Conread position: 5-223
Cow position: chr9:47448162-47447939 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 123, 208

Conread position: 5-223
Cow position: chr9:52536484-52536702 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 131, 69

Conread position: 5-223
Cow position: chr9:55341758-55341978 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 44, 0

Conread position: 5-225
Cow position: chr9:34987-34767 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 70, 77

Conread position: 5-232
Cow position: chr9:9957584-9957355 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 120, 177

Conread position: 5-233
Cow position: chr9:5518070-5518303 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 124, 159

Conread position: 5-233
Cow position: chr9:13971781-13972018 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 5-237
Cow position: chr9:41417002-41416770 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 5-245
Cow position: chr9:30138695-30138444 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 72, 172

Conread position: 5-245
Cow position: chr9:50668364-50668119 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 112, 210

Conread position: 5-246
Cow position: chr9:25238808-25238568 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 163, 62

Conread position: 5-247
Cow position: chr9:19278854-19278603 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 96, 106

Conread position: 5-254
Cow position: chr9:12184362-12184105 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 129, 0

Conread position: 5-255
Cow position: chr9:9260667-9260417 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 239

Conread position: 5-256
Cow position: chr9:34945418-34945160 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 250

Conread position: 5-259
Cow position: chr9:7159298-7159547 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 55

Conread position: 5-259
Cow position: chr9:41782482-41782225 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 75, 95

Conread position: 5-259
Cow position: chr9:55365453-55365199 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 125, 77

Conread position: 5-259
Cow position: chr9:58674295-58674043 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 0

Conread position: 5-269
Cow position: chr9:34059026-34058762 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-269
Cow position: chr9:59432109-59432378 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 85, 47

Conread position: 5-270
Cow position: chr9:31777110-31777384 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 26, 0

Conread position: 5-273
Cow position: chr9:2173968-2174232 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 132

Conread position: 5-274
Cow position: chr9:50988405-50988678 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 123, 72

Conread position: 5-275
Cow position: chr9:15006237-15006514 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 5-275
Cow position: chr9:30736897-30736626 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 130

Conread position: 5-275
Cow position: chr9:34956251-34955980 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 183
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 120, 17

Conread position: 5-288
Cow position: chr9:6764163-6763880 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-288
Cow position: chr9:7058447-7058163 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 5-288
Cow position: chr9:8720298-8720016 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 5-288
Cow position: chr9:8778659-8778950 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 283

Conread position: 5-288
Cow position: chr9:8908965-8908684 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 231

Conread position: 5-288
Cow position: chr9:20816381-20816098 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-288
Cow position: chr9:24406554-24406844 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 188
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 152, 233

Conread position: 5-288
Cow position: chr9:26115312-26115593 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 64

Conread position: 5-288
Cow position: chr9:27038721-27039004 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-288
Cow position: chr9:28017220-28016939 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 0

Conread position: 5-288
Cow position: chr9:28025428-28025712 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 0

Conread position: 5-288
Cow position: chr9:29106636-29106920 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 5-288
Cow position: chr9:30722466-30722200 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 5-288
Cow position: chr9:31115291-31115568 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 111

Conread position: 5-288
Cow position: chr9:38634387-38634668 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 5-288
Cow position: chr9:42570823-42571106 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-289
Cow position: chr9:22841906-22841621 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 196
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 66, 141

Conread position: 5-290
Cow position: chr9:32238923-32238637 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 72

Conread position: 5-291
Cow position: chr9:2201197-2201484 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 132

Conread position: 5-291
Cow position: chr9:21412909-21413196 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 0

Conread position: 5-291
Cow position: chr9:47088055-47088341 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 131

Conread position: 5-318
Cow position: chr9:52753613-52753302 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 0

Conread position: 5-322
Cow position: chr9:55299025-55298709 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 221
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 44, 37

Conread position: 5-323
Cow position: chr9:20393590-20393906 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 72

Conread position: 5-324
Cow position: chr9:3756240-3755921 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 39

Conread position: 5-324
Cow position: chr9:9558519-9558189 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 138

Conread position: 5-324
Cow position: chr9:21383302-21383635 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 229
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 86, 62

Conread position: 5-324
Cow position: chr9:51305081-51304766 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 211
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 120, 62

Conread position: 5-324
Cow position: chr9:62131636-62131958 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 222
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 131, 208

Conread position: 5-330
Cow position: chr9:55534069-55534397 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 300

Conread position: 5-346
Cow position: chr9:17568682-17568337 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 242
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 33, 63

Conread position: 5-346
Cow position: chr9:22443075-22443412 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 30

Conread position: 5-346
Cow position: chr9:22481679-22482031 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 236
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 120, 105

Conread position: 5-346
Cow position: chr9:23859095-23858740 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 64, 80

Conread position: 5-346
Cow position: chr9:48374556-48374213 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 238
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 122, 281

Conread position: 5-347
Cow position: chr9:35564931-35564589 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 131

Conread position: 5-348
Cow position: chr9:8387720-8388063 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-348
Cow position: chr9:9016680-9017022 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 5-348
Cow position: chr9:12259651-12259305 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 5-348
Cow position: chr9:17579855-17579512 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-348
Cow position: chr9:18381396-18381056 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 21

Conread position: 5-348
Cow position: chr9:19155677-19155337 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 5-348
Cow position: chr9:22755331-22754988 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 271

Conread position: 5-348
Cow position: chr9:26978468-26978804 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 0

Conread position: 5-348
Cow position: chr9:28773658-28773314 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 298

Conread position: 5-348
Cow position: chr9:33100614-33100943 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 199

Conread position: 5-348
Cow position: chr9:38753636-38753991 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 5-349
Cow position: chr9:9461126-9461459 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 73

Conread position: 5-349
Cow position: chr9:53777784-53778129 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 249

Conread position: 5-367
Cow position: chr9:39696308-39695945 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 360

Conread position: 5-369
Cow position: chr9:5707818-5707465 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 249
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 166

Conread position: 5-370
Cow position: chr9:217499-217137 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 0

Conread position: 5-370
Cow position: chr9:3878465-3878812 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 251
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 131, 176

Conread position: 5-370
Cow position: chr9:26326353-26326718 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 131

Conread position: 5-370
Cow position: chr9:29149324-29148975 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 107

Conread position: 5-370
Cow position: chr9:33843931-33844293 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 62

Conread position: 5-370
Cow position: chr9:38728632-38728272 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 0

Conread position: 5-370
Cow position: chr9:62546543-62546178 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 131

Conread position: 5-372
Cow position: chr9:777203-776826 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 137

Conread position: 5-373
Cow position: chr9:24917681-24917316 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 76

Conread position: 5-373
Cow position: chr9:51178045-51177678 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 0

Conread position: 5-374
Cow position: chr9:3053698-3054060 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 53

Conread position: 5-378
Cow position: chr9:13493647-13494016 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 231

Conread position: 5-380
Cow position: chr9:59454291-59453915 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 0

Conread position: 5-381
Cow position: chr9:5628426-5628800 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 299

Conread position: 5-381
Cow position: chr9:22656406-22656782 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-381
Cow position: chr9:37158004-37157629 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 5-381
Cow position: chr9:41319129-41319503 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 5-381
Cow position: chr9:47882678-47882303 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 0

Conread position: 5-458
Cow position: chr9:38183938-38184395 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 288

Conread position: 5-459
Cow position: chr9:3379669-3379211 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 313
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 120, 49

Conread position: 5-459
Cow position: chr9:12285099-12284643 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 0

Conread position: 5-459
Cow position: chr9:32972973-32973423 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 116

Conread position: 5-459
Cow position: chr9:51318309-51317844 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 23

Conread position: 5-460
Cow position: chr9:4977092-4976634 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 5-467
Cow position: chr9:10857639-10858091 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 391, 21

Conread position: 5-467
Cow position: chr9:40327010-40327474 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 36

Conread position: 5-467
Cow position: chr9:56293888-56293432 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 307
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 67, 170

Conread position: 5-467
Cow position: chr9:58252099-58251621 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 409

Conread position: 5-467
Cow position: chr9:59539612-59540076 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 90

Conread position: 5-473
Cow position: chr9:9491326-9490864 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 56

Conread position: 5-479
Cow position: chr9:34016015-34016496 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 47

Conread position: 5-483
Cow position: chr9:28726189-28726659 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 187

Conread position: 5-483
Cow position: chr9:35203441-35202940 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 313

Conread position: 5-492
Cow position: chr9:1520189-1520685 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 275

Conread position: 5-501
Cow position: chr9:29184598-29185088 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 83

Conread position: 5-503
Cow position: chr9:8235853-8236356 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 403

Conread position: 6-131
Cow position: chr9:54438380-54438255 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 6-193
Cow position: chr9:56253468-56253282 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 118, 155

Conread position: 6-195
Cow position: chr9:9086862-9086673 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 70, 104

Conread position: 6-225
Cow position: chr9:52037959-52038183 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 107, 187

Conread position: 6-240
Cow position: chr9:2208064-2207830 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 155, 73

Conread position: 6-240
Cow position: chr9:34762125-34762365 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 130, 0

Conread position: 6-246
Cow position: chr9:22398687-22398446 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 116, 78

Conread position: 6-252
Cow position: chr9:8289517-8289262 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 58, 72

Conread position: 6-255
Cow position: chr9:28657172-28656924 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 105

Conread position: 6-259
Cow position: chr9:16746259-16746002 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 49, 72

Conread position: 6-259
Cow position: chr9:20762178-20761926 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 122, 78

Conread position: 6-264
Cow position: chr9:8234672-8234410 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 119, 8

Conread position: 6-277
Cow position: chr9:62729804-62730074 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 6-280
Cow position: chr9:39728036-39727754 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 20, 177

Conread position: 6-288
Cow position: chr9:23343134-23342846 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 96, 275

Conread position: 6-288
Cow position: chr9:55635102-55634813 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 70, 42

Conread position: 6-288
Cow position: chr9:59479249-59478956 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 0

Conread position: 6-289
Cow position: chr9:3388229-3387946 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 115

Conread position: 6-321
Cow position: chr9:2717921-2718234 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 12

Conread position: 6-324
Cow position: chr9:32582362-32582687 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 207
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 120, 59

Conread position: 6-344
Cow position: chr9:49493018-49492678 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 242
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 68, 24

Conread position: 6-346
Cow position: chr9:20098468-20098124 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 219
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 116, 89

Conread position: 6-346
Cow position: chr9:23428689-23429034 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 235
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 103, 163

Conread position: 6-346
Cow position: chr9:49544520-49544861 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 233

Conread position: 6-373
Cow position: chr9:22803053-22802692 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 0

Conread position: 6-381
Cow position: chr9:29809001-29808630 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 265
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 133, 15

Conread position: 6-391
Cow position: chr9:50689502-50689898 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 264
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 122, 308

Conread position: 6-458
Cow position: chr9:5161531-5161975 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 36

Conread position: 6-467
Cow position: chr9:27781303-27780837 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 386, 0

Conread position: 7-207
Cow position: chr9:64296952-64297155 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 118, 23

Conread position: 7-233
Cow position: chr9:34553644-34553416 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 116, 23

Conread position: 7-234
Cow position: chr9:3354242-3354014 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 130, 101

Conread position: 7-255
Cow position: chr9:8338588-8338340 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-269
Cow position: chr9:15241444-15241706 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 129

Conread position: 7-269
Cow position: chr9:22754388-22754143 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 7, 0

Conread position: 7-284
Cow position: chr9:35023470-35023747 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 132, 108

Conread position: 7-297
Cow position: chr9:2482359-2482066 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 197
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 123, 166

Conread position: 7-324
Cow position: chr9:31663003-31662691 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 88

Conread position: 7-346
Cow position: chr9:27314348-27314677 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 96, 68

Conread position: 7-346
Cow position: chr9:35747839-35747491 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 225
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 25, 299

Conread position: 7-348
Cow position: chr9:7006349-7006691 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 7-370
Cow position: chr9:6693734-6694098 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 130

Conread position: 7-370
Cow position: chr9:6707301-6706937 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 130

Conread position: 7-381
Cow position: chr9:40316732-40317105 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 7-384
Cow position: chr9:2597141-2597515 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 249
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 120, 112

Conread position: 7-388
Cow position: chr9:2859077-2858699 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 257
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 112, 60

Conread position: 7-389
Cow position: chr9:5414979-5415359 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 7-459
Cow position: chr9:10566754-10566295 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 173

Conread position: 7-477
Cow position: chr9:4929158-4928695 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 158

Conread position: 8-147
Cow position: chr9:16086652-16086791 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 8-173
Cow position: chr9:37379820-37379984 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 96, 0

Conread position: 8-224
Cow position: chr9:50293988-50294206 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 122, 168

Conread position: 8-225
Cow position: chr9:23043493-23043267 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 125, 18

Conread position: 8-225
Cow position: chr9:51592428-51592649 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 118, 31

Conread position: 8-228
Cow position: chr9:3216728-3216503 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 117, 0

Conread position: 8-233
Cow position: chr9:25000254-25000485 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 122, 0

Conread position: 8-279
Cow position: chr9:48017288-48017557 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 8-282
Cow position: chr9:59507608-59507333 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 133, 107

Conread position: 8-284
Cow position: chr9:19380156-19379877 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 119, 40

Conread position: 8-325
Cow position: chr9:13115879-13115560 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 218
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 115, 20

Conread position: 8-362
Cow position: chr9:5608194-5607842 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 121, 78

Conread position: 8-370
Cow position: chr9:19592924-19593284 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 128

Conread position: 8-519
Cow position: chr9:16300033-16300538 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 59

Conread position: 9-187
Cow position: chr9:52724666-52724848 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 121, 12

Conread position: 9-232
Cow position: chr9:11312979-11313201 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 63, 0

Conread position: 9-259
Cow position: chr9:32688229-32688481 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 116, 47

Conread position: 9-260
Cow position: chr9:26281671-26281932 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 23, 75

Conread position: 9-349
Cow position: chr9:10355021-10355363 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 241
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 129, 14

Conread position: 9-496
Cow position: chr9:45285008-45285478 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 219

Conread position: 10-204
Cow position: chr9:35057726-35057923 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 99, 20

Conread position: 10-249
Cow position: chr9:55042848-55042606 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 118, 13

Conread position: 10-256
Cow position: chr9:25547207-25546965 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 126, 0

Conread position: 10-342
Cow position: chr9:25214144-25214487 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 230
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 114, 53

Conread position: 10-346
Cow position: chr9:27689909-27689590 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 218
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 79

Conread position: 11-153
Cow position: chr9:25764661-25764520 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 11-177
Cow position: chr9:21840669-21840503 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 11-191
Cow position: chr9:3730603-3730780 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 66, 0

Conread position: 11-213
Cow position: chr9:20091810-20091610 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 16, 160

Conread position: 11-225
Cow position: chr9:18381973-18381753 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 122, 10

Conread position: 11-228
Cow position: chr9:25020762-25020540 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 37

Conread position: 11-228
Cow position: chr9:31539733-31539957 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 79

Conread position: 11-255
Cow position: chr9:43194018-43194268 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 169
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 28, 69

Conread position: 11-287
Cow position: chr9:30891472-30891754 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 60, 246

Conread position: 11-287
Cow position: chr9:42930966-42930690 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 185
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 71

Conread position: 11-288
Cow position: chr9:59411524-59411799 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 120, 37

Conread position: 11-325
Cow position: chr9:6684249-6684565 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 63, 154

Conread position: 11-346
Cow position: chr9:26099879-26099536 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 107, 28

Conread position: 11-346
Cow position: chr9:27369102-27368761 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 233
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 114, 61

Conread position: 11-346
Cow position: chr9:27892093-27892437 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 11-346
Cow position: chr9:37423800-37423452 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 237
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 48

Conread position: 11-346
Cow position: chr9:51760692-51761030 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 222
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 63

Conread position: 11-374
Cow position: chr9:2548081-2547723 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 10

Conread position: 11-388
Cow position: chr9:20407166-20406795 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 37

Conread position: 11-467
Cow position: chr9:43301993-43301539 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 242

Conread position: 12-348
Cow position: chr9:53602950-53602610 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 231

Conread position: 12-348
Cow position: chr9:61762757-61763089 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 225
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 112, 74

Conread position: 13-231
Cow position: chr9:51822700-51822483 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 127, 59

Conread position: 13-231
Cow position: chr9:51871639-51871422 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 127, 59

Conread position: 13-246
Cow position: chr9:5692008-5692242 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 126, 37

Conread position: 13-272
Cow position: chr9:51621233-51620974 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 13-324
Cow position: chr9:5880145-5880463 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 205
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 26, 61

Conread position: 13-346
Cow position: chr9:8612838-8612486 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 244
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 112, 147

Conread position: 14-246
Cow position: chr9:35745888-35745658 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 60, 168

Conread position: 14-287
Cow position: chr9:34742095-34742368 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 14-324
Cow position: chr9:23438301-23438604 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 214
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 115, 108

Conread position: 14-370
Cow position: chr9:19303158-19303514 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 122

Conread position: 15-202
Cow position: chr9:2113230-2113424 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 15-228
Cow position: chr9:64516294-64516498 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 15-284
Cow position: chr9:53055509-53055236 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 113, 78

Conread position: 15-356
Cow position: chr9:36506732-36507078 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 238
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 113, 192

Conread position: 16-379
Cow position: chr9:34092877-34093259 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 259
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 108, 300

Conread position: 17-250
Cow position: chr9:38032598-38032842 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 17-266
Cow position: chr9:52999586-52999823 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 41, 61

Conread position: 17-346
Cow position: chr9:27085997-27085656 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 50

Conread position: 17-370
Cow position: chr9:18478276-18477923 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 119

Conread position: 17-372
Cow position: chr9:25037779-25037423 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 120

Conread position: 18-250
Cow position: chr9:19118494-19118733 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 61

Conread position: 18-253
Cow position: chr9:56746520-56746752 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 52, 70

Conread position: 18-372
Cow position: chr9:12656152-12656503 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 19-258
Cow position: chr9:27076731-27076979 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 186
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 105, 0

Conread position: 20-246
Cow position: chr9:63966430-63966200 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 55, 158

Conread position: 20-256
Cow position: chr9:35305559-35305800 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 108, 10

Conread position: 20-324
Cow position: chr9:22151579-22151866 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 113, 28

Conread position: 20-347
Cow position: chr9:2287572-2287245 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 66

Conread position: 20-370
Cow position: chr9:51104861-51105211 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 116

Conread position: 20-492
Cow position: chr9:8998081-8997602 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 278

Conread position: 21-518
Cow position: chr9:5434135-5433664 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 331
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 438, 35

Conread position: 22-254
Cow position: chr9:2633402-2633644 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 141

Conread position: 22-322
Cow position: chr9:31077155-31077455 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 278

Conread position: 23-254
Cow position: chr9:41317417-41317664 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 23-280
Cow position: chr9:43025061-43024802 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 171
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 205, 0

Conread position: 23-288
Cow position: chr9:8548324-8548066 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 23-370
Cow position: chr9:1053772-1053425 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 113

Conread position: 24-263
Cow position: chr9:59010672-59010894 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 25

Conread position: 26-255
Cow position: chr9:23422212-23422434 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 159, 41

Conread position: 26-330
Cow position: chr9:37193180-37192875 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 275

Conread position: 27-231
Cow position: chr9:5840737-5840943 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 110, 0

Conread position: 27-477
Cow position: chr9:42585111-42585563 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 109

Conread position: 30-346
Cow position: chr9:20960759-20961089 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 229
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 23, 133

Conread position: 30-492
Cow position: chr9:5246361-5245914 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 144

Conread position: 31-256
Cow position: chr9:24398621-24398850 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 99, 0

Conread position: 32-255
Cow position: chr9:6626981-6626763 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 124, 35

Conread position: 32-284
Cow position: chr9:22828585-22828332 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 0

Conread position: 32-348
Cow position: chr9:21963096-21963412 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 265

Conread position: 32-348
Cow position: chr9:52689129-52689427 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 272, 162

Conread position: 32-370
Cow position: chr9:11215490-11215827 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 104

Conread position: 32-461
Cow position: chr9:35375935-35375515 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 274

Conread position: 33-218
Cow position: chr9:36601905-36602091 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 15

Conread position: 33-259
Cow position: chr9:29876843-29876613 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 85, 109

Conread position: 35-192
Cow position: chr9:11831647-11831484 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 35-262
Cow position: chr9:46531602-46531829 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 35-370
Cow position: chr9:1981821-1982156 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 35-481
Cow position: chr9:52504794-52505247 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 216

Conread position: 36-256
Cow position: chr9:56861516-56861299 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 135, 51

Conread position: 36-275
Cow position: chr9:14838911-14839135 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 51, 0

Conread position: 36-284
Cow position: chr9:35357420-35357663 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 225, 89

Conread position: 37-288
Cow position: chr9:36653202-36652946 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 85, 211

Conread position: 37-346
Cow position: chr9:7327341-7327671 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 221
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 37-346
Cow position: chr9:18110355-18110666 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 217
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 83, 118

Conread position: 37-370
Cow position: chr9:3312194-3312523 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 70

Conread position: 38-234
Cow position: chr9:36581695-36581891 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 38-256
Cow position: chr9:33845927-33846150 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 41-255
Cow position: chr9:37431516-37431294 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 5, 27

Conread position: 42-225
Cow position: chr9:41958175-41957986 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 83, 0

Conread position: 42-255
Cow position: chr9:29580139-29579926 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 42-259
Cow position: chr9:51566004-51566217 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 172
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 210, 34

Conread position: 42-263
Cow position: chr9:18244947-18245161 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 7, 0

Conread position: 42-288
Cow position: chr9:25469515-25469271 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 128, 101

Conread position: 42-324
Cow position: chr9:3220621-3220344 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 268, 29

Conread position: 42-347
Cow position: chr9:41530756-41530452 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 15, 6

Conread position: 42-370
Cow position: chr9:42047997-42047669 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 94

Conread position: 42-370
Cow position: chr9:42049283-42048955 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 94

Conread position: 42-453
Cow position: chr9:57950808-57951228 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 298
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 30, 186

Conread position: 42-467
Cow position: chr9:12194590-12194152 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 372

Conread position: 42-501
Cow position: chr9:54610725-54611190 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 26

Conread position: 43-255
Cow position: chr9:27462982-27463192 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 52, 0

Conread position: 43-324
Cow position: chr9:8525566-8525285 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 16

Conread position: 43-324
Cow position: chr9:56031833-56032107 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 45-288
Cow position: chr9:31124422-31124666 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 45-313
Cow position: chr9:34204629-34204370 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 92, 65

Conread position: 46-284
Cow position: chr9:34901109-34901344 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 0

Conread position: 46-489
Cow position: chr9:41789796-41789340 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 314
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 26, 211

Conread position: 47-391
Cow position: chr9:6880273-6879924 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 235
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 77, 209

Conread position: 48-178
Cow position: chr9:7462111-7461981 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 48-356
Cow position: chr9:15999048-15999347 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 35, 0

Conread position: 48-370
Cow position: chr9:31489121-31489440 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 7

Conread position: 48-370
Cow position: chr9:31528511-31528192 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 7

Conread position: 49-370
Cow position: chr9:27040763-27041081 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 0

Conread position: 51-217
Cow position: chr9:3925228-3925062 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 52-192
Cow position: chr9:35533521-35533381 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 52-192
Cow position: chr9:38344672-38344532 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 52-256
Cow position: chr9:8724320-8724107 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 52-256
Cow position: chr9:13847880-13847671 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 186

Conread position: 52-256
Cow position: chr9:30477283-30477493 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 79, 0

Conread position: 52-287
Cow position: chr9:61023101-61022868 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 125, 0

Conread position: 52-288
Cow position: chr9:20942120-20942354 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 52-322
Cow position: chr9:789275-789016 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 109, 15

Conread position: 52-324
Cow position: chr9:50203303-50203019 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 6, 259

Conread position: 52-324
Cow position: chr9:64287540-64287269 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 228, 0

Conread position: 52-370
Cow position: chr9:14871385-14871699 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 84

Conread position: 52-373
Cow position: chr9:10940255-10940576 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 52-388
Cow position: chr9:12428014-12428349 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 87

Conread position: 52-459
Cow position: chr9:20416017-20416420 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 277
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 93, 61

Conread position: 52-459
Cow position: chr9:62360737-62361146 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 15

Conread position: 52-496
Cow position: chr9:42445480-42445932 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 91

Conread position: 53-288
Cow position: chr9:19895132-19894897 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 171

Conread position: 53-291
Cow position: chr9:5429975-5429735 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 83

Conread position: 53-348
Cow position: chr9:26462085-26462380 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 83

Conread position: 53-370
Cow position: chr9:18710504-18710187 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 83

Conread position: 55-370
Cow position: chr9:47961309-47961624 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 81

Conread position: 56-348
Cow position: chr9:32540395-32540106 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 57-291
Cow position: chr9:32347643-32347878 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 202

Conread position: 58-288
Cow position: chr9:55322137-55321902 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 190, 81

Conread position: 59-245
Cow position: chr9:25972969-25972777 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 59-248
Cow position: chr9:49404469-49404283 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 59-253
Cow position: chr9:58746856-58746661 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 59-284
Cow position: chr9:3411254-3411030 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 59-325
Cow position: chr9:13527518-13527254 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 178
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 65, 150

Conread position: 59-345
Cow position: chr9:44516188-44515897 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 199
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 66, 245

Conread position: 59-346
Cow position: chr9:19593829-19594116 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 71, 18

Conread position: 59-367
Cow position: chr9:27289639-27289331 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 60-233
Cow position: chr9:38691820-38691999 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 76, 0

Conread position: 60-370
Cow position: chr9:56837170-56837480 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 76

Conread position: 61-348
Cow position: chr9:22318824-22318535 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 237

Conread position: 61-477
Cow position: chr9:5393521-5393116 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 280
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 86, 74

Conread position: 62-259
Cow position: chr9:37069061-37069265 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 46, 0

Conread position: 62-346
Cow position: chr9:5341118-5340832 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 67, 5

Conread position: 63-388
Cow position: chr9:6191982-6192302 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 153

Conread position: 63-483
Cow position: chr9:54528996-54528573 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 43

Conread position: 64-261
Cow position: chr9:34918802-34919000 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 156
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 92, 0

Conread position: 64-348
Cow position: chr9:26226513-26226229 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 221, 235

Conread position: 64-370
Cow position: chr9:34894650-34894344 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 72

Conread position: 65-189
Cow position: chr9:57055405-57055528 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 81, 12

Conread position: 65-288
Cow position: chr9:41729010-41728790 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 78, 0

Conread position: 65-348
Cow position: chr9:47390077-47389794 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 65-364
Cow position: chr9:8534206-8534502 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 202

Conread position: 65-477
Cow position: chr9:59171899-59172317 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 145

Conread position: 67-254
Cow position: chr9:17906012-17906204 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 67-270
Cow position: chr9:4126523-4126319 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 67-288
Cow position: chr9:20401437-20401658 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 170
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 80, 72

Conread position: 67-288
Cow position: chr9:24724417-24724646 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 104

Conread position: 67-288
Cow position: chr9:26577385-26577603 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 97, 0

Conread position: 67-290
Cow position: chr9:19535690-19535461 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 152

Conread position: 67-318
Cow position: chr9:55884089-55883832 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 61, 244

Conread position: 67-330
Cow position: chr9:32071107-32070844 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 69

Conread position: 67-346
Cow position: chr9:38385394-38385671 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 58, 164

Conread position: 67-349
Cow position: chr9:10546751-10546469 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 246

Conread position: 67-370
Cow position: chr9:27898725-27899017 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 233, 82

Conread position: 67-374
Cow position: chr9:61562980-61563282 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 212
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 223, 30

Conread position: 67-467
Cow position: chr9:53631050-53631454 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 231

Conread position: 67-468
Cow position: chr9:31347422-31347032 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 265
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 246, 89

Conread position: 67-480
Cow position: chr9:20739188-20738767 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 278
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 71, 240

Conread position: 68-261
Cow position: chr9:1751885-1751697 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 95, 0

Conread position: 68-291
Cow position: chr9:61223635-61223412 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 74

Conread position: 68-344
Cow position: chr9:22827577-22827291 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 55, 132

Conread position: 68-348
Cow position: chr9:22456542-22456262 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 68-348
Cow position: chr9:37943254-37942978 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 90

Conread position: 68-374
Cow position: chr9:10308534-10308838 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 208
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 242, 56

Conread position: 69-259
Cow position: chr9:20579119-20579308 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 174, 0

Conread position: 69-287
Cow position: chr9:8937625-8937406 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 69-370
Cow position: chr9:3062279-3062580 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 67

Conread position: 69-480
Cow position: chr9:27697254-27697662 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 168

Conread position: 69-496
Cow position: chr9:31639841-31640274 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 234

Conread position: 69-501
Cow position: chr9:31078608-31079037 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 294
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 59, 38

Conread position: 70-284
Cow position: chr9:414759-414972 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 79, 66

Conread position: 70-370
Cow position: chr9:52746027-52745728 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 210, 0

Conread position: 71-255
Cow position: chr9:10876610-10876795 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 138, 168

Conread position: 71-369
Cow position: chr9:15335824-15335527 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 65

Conread position: 72-349
Cow position: chr9:26064946-26065223 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 72-370
Cow position: chr9:55589544-55589250 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 72-459
Cow position: chr9:10966413-10966027 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 255
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 316, 65

Conread position: 73-279
Cow position: chr9:18419868-18419667 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 5, 0

Conread position: 74-288
Cow position: chr9:49279929-49279708 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 7, 0

Conread position: 74-326
Cow position: chr9:9634312-9634578 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 74-370
Cow position: chr9:30821710-30821411 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 179
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 72, 0

Conread position: 74-497
Cow position: chr9:8868665-8869093 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 139

Conread position: 75-276
Cow position: chr9:9752618-9752822 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 80, 13

Conread position: 76-346
Cow position: chr9:3742264-3741994 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 77-275
Cow position: chr9:9640663-9640853 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 106, 48

Conread position: 77-370
Cow position: chr9:23576010-23576304 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 59

Conread position: 77-381
Cow position: chr9:42405555-42405858 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 203

Conread position: 77-495
Cow position: chr9:824423-824012 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 276
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 319, 268

Conread position: 78-346
Cow position: chr9:46358134-46358408 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 44, 103

Conread position: 78-370
Cow position: chr9:27301898-27302190 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 58

Conread position: 78-370
Cow position: chr9:30661402-30661694 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 78-370
Cow position: chr9:49220275-49219983 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 58

Conread position: 79-257
Cow position: chr9:13793960-13793777 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 178

Conread position: 79-345
Cow position: chr9:33388442-33388708 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 221

Conread position: 79-366
Cow position: chr9:50590666-50590385 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 189
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 100

Conread position: 79-370
Cow position: chr9:380549-380258 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 57

Conread position: 79-370
Cow position: chr9:56566765-56567048 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 57

Conread position: 80-233
Cow position: chr9:2366306-2366456 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 80-370
Cow position: chr9:17391767-17392062 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 56

Conread position: 81-269
Cow position: chr9:29192030-29191843 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 36, 0

Conread position: 81-285
Cow position: chr9:19386599-19386400 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 151, 0

Conread position: 81-288
Cow position: chr9:21279640-21279433 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 81-324
Cow position: chr9:29834738-29834495 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 81-348
Cow position: chr9:4534520-4534785 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 35

Conread position: 82-231
Cow position: chr9:11318164-11318014 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 79, 0

Conread position: 82-275
Cow position: chr9:3897519-3897321 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 44, 182

Conread position: 82-370
Cow position: chr9:2483496-2483209 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 41, 51

Conread position: 83-256
Cow position: chr9:16538056-16538229 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 83-288
Cow position: chr9:2192921-2193126 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 84-384
Cow position: chr9:21674516-21674825 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 63, 75

Conread position: 85-346
Cow position: chr9:11849982-11849711 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 181
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 118

Conread position: 86-233
Cow position: chr9:42583655-42583509 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 104, 0

Conread position: 86-334
Cow position: chr9:40415459-40415199 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 53, 129

Conread position: 86-348
Cow position: chr9:64092142-64091885 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 81, 0

Conread position: 86-370
Cow position: chr9:26380480-26380764 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 50

Conread position: 87-252
Cow position: chr9:48118218-48118380 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 52, 56

Conread position: 87-370
Cow position: chr9:26058155-26058440 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 59, 49

Conread position: 87-370
Cow position: chr9:32341502-32341786 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 59, 49

Conread position: 89-348
Cow position: chr9:24904944-24904673 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 179
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 90-356
Cow position: chr9:24424108-24424374 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 159
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 90-381
Cow position: chr9:11810541-11810254 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 56, 46

Conread position: 91-483
Cow position: chr9:33682128-33681745 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 264
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 276, 92

Conread position: 92-243
Cow position: chr9:34400521-34400372 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 92-250
Cow position: chr9:20321602-20321761 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 64, 0

Conread position: 92-278
Cow position: chr9:9495200-9495373 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 92-288
Cow position: chr9:5594950-5594757 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 158
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 43, 0

Conread position: 92-288
Cow position: chr9:6875878-6876074 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 156
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 92-288
Cow position: chr9:64055410-64055604 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 159
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 90, 39

Conread position: 92-324
Cow position: chr9:56773538-56773304 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 92, 213

Conread position: 92-347
Cow position: chr9:2528205-2528465 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 27, 0

Conread position: 92-347
Cow position: chr9:22433490-22433743 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 0

Conread position: 92-347
Cow position: chr9:44831603-44831857 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 195

Conread position: 92-348
Cow position: chr9:9404614-9404870 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 92-348
Cow position: chr9:11837285-11837541 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 92-348
Cow position: chr9:53257617-53257863 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 210, 93

Conread position: 92-370
Cow position: chr9:3208152-3208430 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 92-370
Cow position: chr9:6440877-6441155 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 92-370
Cow position: chr9:7872424-7872702 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 92-370
Cow position: chr9:12717989-12717710 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 92-370
Cow position: chr9:22572762-22573040 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 92-370
Cow position: chr9:22625966-22626244 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 92-370
Cow position: chr9:45854054-45853776 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 92-370
Cow position: chr9:53744022-53744301 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 92-373
Cow position: chr9:31281412-31281693 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 92-381
Cow position: chr9:25514733-25515022 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 92-388
Cow position: chr9:14185145-14184832 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 42, 24

Conread position: 92-391
Cow position: chr9:11555393-11555692 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 92-467
Cow position: chr9:37967564-37967187 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 175

Conread position: 92-480
Cow position: chr9:3546889-3547278 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 45

Conread position: 92-496
Cow position: chr9:9552538-9552141 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 271
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 363, 165

Conread position: 92-497
Cow position: chr9:9516318-9516715 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 200

Conread position: 93-342
Cow position: chr9:43537451-43537197 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 168
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 194

Conread position: 93-348
Cow position: chr9:40164477-40164732 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 43

Conread position: 93-490
Cow position: chr9:18162700-18163101 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 196

Conread position: 94-388
Cow position: chr9:214006-214307 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 203
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 40, 208

Conread position: 95-367
Cow position: chr9:5158636-5158908 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 30, 38

Conread position: 95-370
Cow position: chr9:45877245-45877517 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 15

Conread position: 95-373
Cow position: chr9:44169802-44170080 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 96-261
Cow position: chr9:1045356-1045521 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 50, 40

Conread position: 96-276
Cow position: chr9:18215474-18215645 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 146
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 127, 40

Conread position: 96-370
Cow position: chr9:2137136-2136862 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 50, 40

Conread position: 97-356
Cow position: chr9:48564542-48564284 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 213, 35

Conread position: 98-225
Cow position: chr9:62135593-62135466 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 38

Conread position: 100-288
Cow position: chr9:58957797-58957995 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 134, 107

Conread position: 100-325
Cow position: chr9:21741531-21741303 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 124

Conread position: 100-348
Cow position: chr9:58451662-58451900 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 127, 0

Conread position: 100-361
Cow position: chr9:8307567-8307311 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 166, 97

Conread position: 100-370
Cow position: chr9:761205-761475 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 19, 26

Conread position: 100-370
Cow position: chr9:43845358-43845088 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 36

Conread position: 101-370
Cow position: chr9:43527044-43526775 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 35

Conread position: 101-370
Cow position: chr9:58233019-58233288 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 35

Conread position: 101-480
Cow position: chr9:21888613-21888231 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 256
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 213, 199

Conread position: 102-349
Cow position: chr9:8637097-8636848 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 180, 34

Conread position: 103-281
Cow position: chr9:55032182-55032359 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 144
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 55, 0

Conread position: 103-324
Cow position: chr9:48809956-48809736 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 211, 40

Conread position: 103-348
Cow position: chr9:9010506-9010753 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 126, 61

Conread position: 103-374
Cow position: chr9:47385341-47385612 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 204, 190

Conread position: 105-269
Cow position: chr9:2495060-2494898 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 16, 131

Conread position: 106-367
Cow position: chr9:58647482-58647219 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 180
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 88, 195

Conread position: 107-282
Cow position: chr9:20810629-20810801 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 128, 0

Conread position: 108-500
Cow position: chr9:20848374-20847975 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 109-373
Cow position: chr9:10082342-10082606 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 39, 32

Conread position: 109-494
Cow position: chr9:61997169-61997547 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 258
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 284, 44

Conread position: 110-265
Cow position: chr9:29092206-29092049 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 147, 0

Conread position: 110-288
Cow position: chr9:58551408-58551231 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 27, 0

Conread position: 110-347
Cow position: chr9:28740110-28739868 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 76, 187

Conread position: 110-348
Cow position: chr9:36586384-36586622 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 163
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 18, 56

Conread position: 110-354
Cow position: chr9:23028235-23027985 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 143, 178

Conread position: 110-496
Cow position: chr9:1951835-1952220 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 32

Conread position: 110-501
Cow position: chr9:42498263-42497870 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 102

Conread position: 112-324
Cow position: chr9:12039633-12039839 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 178, 27

Conread position: 112-370
Cow position: chr9:17104071-17103813 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 34, 24

Conread position: 113-370
Cow position: chr9:36687328-36687071 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 33, 23

Conread position: 114-240
Cow position: chr9:34275142-34275268 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 114-348
Cow position: chr9:8441381-8441150 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 127, 87

Conread position: 114-520
Cow position: chr9:23430718-23431117 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 263
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 279, 94

Conread position: 115-388
Cow position: chr9:5455724-5455451 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 130

Conread position: 116-258
Cow position: chr9:1492543-1492400 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 116-356
Cow position: chr9:20680980-20681217 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 151, 119

Conread position: 116-386
Cow position: chr9:28969656-28969923 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 47, 9

Conread position: 118-324
Cow position: chr9:46669163-46668961 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 192, 6

Conread position: 120-248
Cow position: chr9:18028718-18028845 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 114, 0

Conread position: 120-288
Cow position: chr9:48628655-48628489 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 57, 0

Conread position: 120-291
Cow position: chr9:55447102-55447273 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 142
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 26, 16

Conread position: 121-252
Cow position: chr9:28027731-28027600 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 15

Conread position: 122-291
Cow position: chr9:10632468-10632300 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 141
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 34, 19

Conread position: 122-370
Cow position: chr9:8235539-8235290 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 24, 0

Conread position: 122-374
Cow position: chr9:21823482-21823734 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 167, 178

Conread position: 122-459
Cow position: chr9:18121628-18121290 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 227
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 258, 0

Conread position: 123-286
Cow position: chr9:2023116-2022953 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 123-459
Cow position: chr9:29776176-29776513 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 221
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 265, 24

Conread position: 124-255
Cow position: chr9:26311017-26310886 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 124-288
Cow position: chr9:20038738-20038904 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 11, 0

Conread position: 125-260
Cow position: chr9:17929174-17929043 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 130, 11

Conread position: 125-288
Cow position: chr9:11035472-11035310 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 33, 0

Conread position: 125-302
Cow position: chr9:22462769-22462592 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 144
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 11

Conread position: 125-348
Cow position: chr9:63028990-63028767 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 165, 174

Conread position: 125-370
Cow position: chr9:10666095-10666340 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 21, 11

Conread position: 125-386
Cow position: chr9:36357095-36357356 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 11

Conread position: 125-388
Cow position: chr9:30664362-30664621 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 110, 0

Conread position: 126-255
Cow position: chr9:6117779-6117908 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 126-288
Cow position: chr9:29357538-29357376 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 126-290
Cow position: chr9:62400374-62400210 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 102, 98

Conread position: 126-348
Cow position: chr9:42703581-42703803 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 20, 10

Conread position: 126-349
Cow position: chr9:52448894-52449115 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 119, 10

Conread position: 127-348
Cow position: chr9:21943775-21943988 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 163, 64

Conread position: 128-288
Cow position: chr9:22434688-22434840 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 128-346
Cow position: chr9:11155920-11155705 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 182, 19

Conread position: 128-379
Cow position: chr9:27345021-27345272 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 182, 51

Conread position: 128-388
Cow position: chr9:34355516-34355768 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 182, 104

Conread position: 129-370
Cow position: chr9:241421-241662 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 17, 7

Conread position: 129-387
Cow position: chr9:8729310-8729562 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 130-348
Cow position: chr9:50691153-50691387 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 132-346
Cow position: chr9:4284859-4285074 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 138, 75

Conread position: 136-269
Cow position: chr9:12414692-12414824 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 136-490
Cow position: chr9:63746210-63745866 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 237
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 174, 99

Conread position: 137-352
Cow position: chr9:62657200-62656987 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 170, 163

Conread position: 138-324
Cow position: chr9:41680138-41679956 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 120, 13

Conread position: 141-288
Cow position: chr9:8900702-8900554 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 5, 0

Conread position: 141-348
Cow position: chr9:8417975-8418178 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 142-346
Cow position: chr9:24631562-24631767 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 16, 170

Conread position: 143-248
Cow position: chr9:19068226-19068121 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 143-267
Cow position: chr9:58854006-58853882 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 143-285
Cow position: chr9:33823493-33823351 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 119
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 143-288
Cow position: chr9:34737816-34737961 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 143-321
Cow position: chr9:54205924-54206108 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 160

Conread position: 143-343
Cow position: chr9:40216663-40216464 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 20, 109

Conread position: 143-346
Cow position: chr9:5071212-5071407 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 87, 0

Conread position: 143-346
Cow position: chr9:35369282-35369079 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 138, 154

Conread position: 143-346
Cow position: chr9:46657315-46657113 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 147, 153

Conread position: 143-347
Cow position: chr9:20237606-20237809 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 166, 149

Conread position: 143-348
Cow position: chr9:6366135-6366340 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 143-348
Cow position: chr9:18540177-18539974 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 138, 0

Conread position: 143-348
Cow position: chr9:41857930-41857725 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 147, 156

Conread position: 143-348
Cow position: chr9:43814841-43814639 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 149, 0

Conread position: 143-370
Cow position: chr9:1122439-1122666 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 143-388
Cow position: chr9:3594127-3594369 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 158, 80

Conread position: 143-483
Cow position: chr9:26057050-26057380 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 246, 128

Conread position: 144-277
Cow position: chr9:7363436-7363303 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 144-343
Cow position: chr9:47905879-47906087 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 114, 158

Conread position: 144-346
Cow position: chr9:27449727-27449532 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 144-370
Cow position: chr9:27301909-27301683 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 144-374
Cow position: chr9:5345641-5345418 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 137, 65

Conread position: 145-333
Cow position: chr9:34690483-34690670 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 185, 0

Conread position: 145-346
Cow position: chr9:21689288-21689087 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 146, 164

Conread position: 145-348
Cow position: chr9:38623869-38624072 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 145-348
Cow position: chr9:42831667-42831464 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 145-356
Cow position: chr9:2398232-2398443 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 165, 154

Conread position: 145-370
Cow position: chr9:6735858-6736083 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 145-370
Cow position: chr9:36685262-36685487 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 145-370
Cow position: chr9:44751862-44751637 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 145-373
Cow position: chr9:246377-246602 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 139, 0

Conread position: 145-373
Cow position: chr9:40978368-40978140 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 146-348
Cow position: chr9:59665411-59665210 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 119, 0

Conread position: 147-370
Cow position: chr9:33725961-33726184 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 148-370
Cow position: chr9:3933837-3934059 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 149-290
Cow position: chr9:60027853-60027719 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 149-324
Cow position: chr9:19903448-19903273 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 141, 148

Conread position: 149-370
Cow position: chr9:54483695-54483916 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 158, 143

Conread position: 150-275
Cow position: chr9:975418-975294 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 122, 0

Conread position: 150-288
Cow position: chr9:16086653-16086517 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 131, 85

Conread position: 150-325
Cow position: chr9:3574727-3574557 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 154, 44

Conread position: 151-391
Cow position: chr9:54666298-54666061 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 159, 83

Conread position: 151-480
Cow position: chr9:25964430-25964766 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 219
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 156, 148

Conread position: 151-496
Cow position: chr9:42998068-42998420 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 123, 183

Conread position: 152-346
Cow position: chr9:39583214-39583022 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 138, 153

Conread position: 152-346
Cow position: chr9:42703577-42703383 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 161, 149

Conread position: 154-346
Cow position: chr9:32986838-32987030 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 151, 146

Conread position: 154-347
Cow position: chr9:13205182-13205370 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 95, 16

Conread position: 154-370
Cow position: chr9:20582071-20581855 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 67, 77

Conread position: 155-288
Cow position: chr9:50919781-50919648 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 79, 24

Conread position: 155-346
Cow position: chr9:24886232-24886424 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 155-467
Cow position: chr9:16179991-16180308 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 248, 0

Conread position: 155-468
Cow position: chr9:34957662-34957976 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 155, 137

Conread position: 155-483
Cow position: chr9:4645944-4646267 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 224
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 236, 80

Conread position: 155-492
Cow position: chr9:26391154-26390820 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 229
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 155, 135

Conread position: 155-496
Cow position: chr9:18002562-18002903 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 232
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 135, 81

Conread position: 157-346
Cow position: chr9:24218156-24218344 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 142, 0

Conread position: 158-269
Cow position: chr9:2414961-2415072 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 158-324
Cow position: chr9:52739513-52739678 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 123, 99

Conread position: 158-346
Cow position: chr9:12321676-12321859 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 158-370
Cow position: chr9:37260583-37260371 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 135, 141

Conread position: 158-373
Cow position: chr9:18505784-18505569 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 158-381
Cow position: chr9:3520554-3520777 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 132, 141

Conread position: 158-496
Cow position: chr9:28983573-28983233 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 222
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 68, 145

Conread position: 159-284
Cow position: chr9:6064908-6065033 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 159-348
Cow position: chr9:60081530-60081346 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 140, 0

Conread position: 160-288
Cow position: chr9:11438676-11438548 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 160-343
Cow position: chr9:14796399-14796576 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 160-381
Cow position: chr9:37986550-37986329 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 160-519
Cow position: chr9:5763244-5763602 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 237
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 279

Conread position: 161-284
Cow position: chr9:25657908-25657786 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 161-319
Cow position: chr9:48106733-48106894 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 96, 140

Conread position: 161-370
Cow position: chr9:10761580-10761788 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 200, 0

Conread position: 162-325
Cow position: chr9:3532533-3532689 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 128, 32

Conread position: 162-387
Cow position: chr9:16812984-16813201 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 95, 73

Conread position: 163-288
Cow position: chr9:16755926-16756051 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 163-346
Cow position: chr9:10149684-10149866 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 163-370
Cow position: chr9:16497517-16497308 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 130, 0

Conread position: 164-346
Cow position: chr9:40517335-40517512 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 164-373
Cow position: chr9:17785078-17785289 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 75

Conread position: 164-477
Cow position: chr9:50080665-50080979 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 209
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 229, 194

Conread position: 165-348
Cow position: chr9:2421895-2422078 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 166-324
Cow position: chr9:5094916-5094760 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 166-348
Cow position: chr9:59149242-59149424 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 166-370
Cow position: chr9:4674012-4674215 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 96, 0

Conread position: 167-348
Cow position: chr9:1741773-1741952 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 123, 49

Conread position: 167-391
Cow position: chr9:5621653-5621876 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 143, 80

Conread position: 169-288
Cow position: chr9:9947213-9947094 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 169-356
Cow position: chr9:52409079-52409264 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 111, 0

Conread position: 169-370
Cow position: chr9:3185650-3185454 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 64

Conread position: 169-388
Cow position: chr9:29812617-29812404 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 170-346
Cow position: chr9:56253276-56253100 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 124

Conread position: 171-370
Cow position: chr9:764284-764085 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 171-480
Cow position: chr9:22114267-22114570 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 208
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 139, 24

Conread position: 172-288
Cow position: chr9:11132561-11132673 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 175-370
Cow position: chr9:54428770-54428576 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 175-388
Cow position: chr9:26404159-26403946 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 135, 124

Conread position: 176-324
Cow position: chr9:45484530-45484385 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 109, 0

Conread position: 176-344
Cow position: chr9:31114326-31114489 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 176-370
Cow position: chr9:47604234-47604428 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 176-370
Cow position: chr9:54672496-54672302 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 176-370
Cow position: chr9:59689292-59689486 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 177-348
Cow position: chr9:13034700-13034871 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 111, 122

Conread position: 178-346
Cow position: chr9:25464718-25464884 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 179-370
Cow position: chr9:8187850-8188041 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 180-370
Cow position: chr9:42426677-42426867 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 182-492
Cow position: chr9:58439423-58439727 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 201
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 278, 48

Conread position: 182-501
Cow position: chr9:33218590-33218906 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 209
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 131, 15

Conread position: 184-474
Cow position: chr9:21030678-21030379 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 198
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 70, 0

Conread position: 185-370
Cow position: chr9:24591797-24591982 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 186-349
Cow position: chr9:36623095-36623256 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 124, 26

Conread position: 187-370
Cow position: chr9:39774801-39774618 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 187-483
Cow position: chr9:38344253-38343952 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 202
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 112, 99

Conread position: 187-483
Cow position: chr9:38793377-38793074 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 192
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 145, 0

Conread position: 187-496
Cow position: chr9:43871330-43871026 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 209
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 126, 115

Conread position: 189-348
Cow position: chr9:31811306-31811463 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 189-389
Cow position: chr9:11830364-11830165 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 118, 103

Conread position: 190-373
Cow position: chr9:19542263-19542081 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 120, 82

Conread position: 194-370
Cow position: chr9:5218829-5219004 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 116, 98

Conread position: 194-370
Cow position: chr9:14387003-14387178 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 152, 0

Conread position: 197-370
Cow position: chr9:43806291-43806118 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 197-370
Cow position: chr9:59668506-59668679 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 197-388
Cow position: chr9:49271002-49271192 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 84, 98

Conread position: 197-461
Cow position: chr9:14974579-14974843 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 173
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 113, 40

Conread position: 197-501
Cow position: chr9:5226817-5227129 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 206
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 113, 95

Conread position: 199-370
Cow position: chr9:31104132-31104303 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 199-374
Cow position: chr9:43023767-43023593 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 200-346
Cow position: chr9:26434719-26434868 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 200-386
Cow position: chr9:2065374-2065187 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 201-483
Cow position: chr9:9199441-9199719 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 189
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 109, 91

Conread position: 202-348
Cow position: chr9:12037492-12037346 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 105, 99

Conread position: 203-492
Cow position: chr9:6933730-6934021 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 194
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 110, 97

Conread position: 208-348
Cow position: chr9:15047132-15047272 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 209-490
Cow position: chr9:32677018-32676732 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 191
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 86

Show alignments to all cow chromosomes.