Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-MPL-MPL384_8_I21.5
        

               Conread position:
               1-113
               

               Cow position:
               chrX:20789234-20789124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               1-131
               

               Cow position:
               chrX:488048-488180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               1-131
               

               Cow position:
               chrX:22125355-22125224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1-172
               

               Cow position:
               chrX:2648849-2648673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               132, 27
               

               Conread position:
               1-233
               

               Cow position:
               chrX:16733238-16733002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               135, 66
               

               Conread position:
               1-248
               

               Cow position:
               chrX:8517116-8517367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 66
               

               Conread position:
               1-252
               

               Cow position:
               chrX:25404845-25404592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               130, 66
               

               Conread position:
               1-253
               

               Cow position:
               chrX:2146826-2147080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               133, 58
               

               Conread position:
               1-255
               

               Cow position:
               chrX:12980835-12980581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-255
               

               Cow position:
               chrX:19878545-19878805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               1-255
               

               Cow position:
               chrX:25436420-25436162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               131, 41
               

               Conread position:
               1-288
               

               Cow position:
               chrX:42540111-42540402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               126, 267
               

               Conread position:
               1-346
               

               Cow position:
               chrX:19742000-19741647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               61, 315
               

               Conread position:
               1-346
               

               Cow position:
               chrX:33803509-33803156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 206
               

               Conread position:
               1-356
               

               Cow position:
               chrX:28111007-28111373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               253
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               140, 50
               

               Conread position:
               1-391
               

               Cow position:
               chrX:33827537-33827120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               67, 175
               

               Conread position:
               1-496
               

               Cow position:
               chrX:151415-151910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 111
               

               Conread position:
               2-110
               

               Cow position:
               chrX:25361075-25361182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               2-117
               

               Cow position:
               chrX:40365231-40365116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-121
               

               Cow position:
               chrX:21625466-21625348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               2-122
               

               Cow position:
               chrX:20544592-20544472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-123
               

               Cow position:
               chrX:18455270-18455148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               2-129
               

               Cow position:
               chrX:4768229-4768354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               2-129
               

               Cow position:
               chrX:42380328-42380200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               2-130
               

               Cow position:
               chrX:4794995-4794867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-173
               

               Cow position:
               chrX:18215444-18215616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               89, 154
               

               Conread position:
               2-175
               

               Cow position:
               chrX:17158315-17158139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               126, 163
               

               Conread position:
               2-178
               

               Cow position:
               chrX:25198952-25199134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               123, 85
               

               Conread position:
               2-183
               

               Cow position:
               chrX:2701324-2701137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               2-192
               

               Cow position:
               chrX:18468281-18468477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               2-219
               

               Cow position:
               chrX:37128365-37128589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 94
               

               Conread position:
               2-221
               

               Cow position:
               chrX:34866320-34866103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               134, 56
               

               Conread position:
               2-228
               

               Cow position:
               chrX:20734158-20734388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               127, 65
               

               Conread position:
               2-231
               

               Cow position:
               chrX:29031892-29032128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               2-232
               

               Cow position:
               chrX:35441058-35441294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               2-233
               

               Cow position:
               chrX:9538055-9538287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               126, 75
               

               Conread position:
               2-233
               

               Cow position:
               chrX:12724280-12724513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               115, 96
               

               Conread position:
               2-244
               

               Cow position:
               chrX:8541979-8542226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               14, 21
               

               Conread position:
               2-245
               

               Cow position:
               chrX:3471235-3471483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               2-245
               

               Cow position:
               chrX:4415363-4415608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               128, 33
               

               Conread position:
               2-247
               

               Cow position:
               chrX:3145516-3145762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               138, 50
               

               Conread position:
               2-247
               

               Cow position:
               chrX:6043976-6043727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               129, 102
               

               Conread position:
               2-247
               

               Cow position:
               chrX:25425646-25425896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               123, 224
               

               Conread position:
               2-248
               

               Cow position:
               chrX:21815679-21815928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               127, 20
               

               Conread position:
               2-248
               

               Cow position:
               chrX:28214847-28215098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               127, 91
               

               Conread position:
               2-249
               

               Cow position:
               chrX:4329572-4329320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               132, 211
               

               Conread position:
               2-249
               

               Cow position:
               chrX:28993634-28993385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               129, 19
               

               Conread position:
               2-249
               

               Cow position:
               chrX:40496085-40495838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               141, 16
               

               Conread position:
               2-249
               

               Cow position:
               chrX:40788660-40788917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               78, 170
               

               Conread position:
               2-253
               

               Cow position:
               chrX:4409072-4409336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               2-253
               

               Cow position:
               chrX:17631320-17631066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               111, 96
               

               Conread position:
               2-256
               

               Cow position:
               chrX:2382979-2383218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               73, 38
               

               Conread position:
               2-256
               

               Cow position:
               chrX:9837631-9837887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               117, 75
               

               Conread position:
               2-256
               

               Cow position:
               chrX:36133698-36133445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               56, 165
               

               Conread position:
               2-257
               

               Cow position:
               chrX:22409207-22408949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               123, 238
               

               Conread position:
               2-259
               

               Cow position:
               chrX:6203020-6203279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               122, 64
               

               Conread position:
               2-259
               

               Cow position:
               chrX:6835749-6835488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               123, 146
               

               Conread position:
               2-259
               

               Cow position:
               chrX:9854786-9855050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               2-259
               

               Cow position:
               chrX:9953628-9953891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               2-259
               

               Cow position:
               chrX:33815659-33815918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               124, 236
               

               Conread position:
               2-259
               

               Cow position:
               chrX:37949298-37949561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               76, 259
               

               Conread position:
               2-259
               

               Cow position:
               chrX:42530982-42530715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               46, 71
               

               Conread position:
               2-266
               

               Cow position:
               chrX:13429949-13429697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               79, 65
               

               Conread position:
               2-267
               

               Cow position:
               chrX:17200300-17200581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               2-268
               

               Cow position:
               chrX:26728368-26728634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 134
               

               Conread position:
               2-269
               

               Cow position:
               chrX:13404839-13404565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 51
               

               Conread position:
               2-270
               

               Cow position:
               chrX:43408512-43408783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               126, 73
               

               Conread position:
               2-277
               

               Cow position:
               chrX:44367289-44367564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               123, 26
               

               Conread position:
               2-280
               

               Cow position:
               chrX:37760366-37760655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               116, 261
               

               Conread position:
               2-284
               

               Cow position:
               chrX:27450534-27450226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               30, 47
               

               Conread position:
               2-284
               

               Cow position:
               chrX:34238233-34238516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               2-288
               

               Cow position:
               chrX:12111145-12110856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               113, 153
               

               Conread position:
               2-288
               

               Cow position:
               chrX:20538790-20539069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               2-288
               

               Cow position:
               chrX:23035848-23036133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               120, 88
               

               Conread position:
               2-288
               

               Cow position:
               chrX:34993684-34993978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               2-289
               

               Cow position:
               chrX:10440328-10440039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 33
               

               Conread position:
               2-297
               

               Cow position:
               chrX:1793656-1793354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 170
               

               Conread position:
               2-319
               

               Cow position:
               chrX:41594769-41594443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               132, 301
               

               Conread position:
               2-321
               

               Cow position:
               chrX:3121354-3121028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               127, 49
               

               Conread position:
               2-322
               

               Cow position:
               chrX:34009257-34009583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 296
               

               Conread position:
               2-324
               

               Cow position:
               chrX:4123348-4123670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 148
               

               Conread position:
               2-324
               

               Cow position:
               chrX:10866354-10866033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 278
               

               Conread position:
               2-324
               

               Cow position:
               chrX:24006311-24005992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               229
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               126, 28
               

               Conread position:
               2-330
               

               Cow position:
               chrX:5566311-5565981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               106, 115
               

               Conread position:
               2-343
               

               Cow position:
               chrX:2465770-2465426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 37
               

               Conread position:
               2-344
               

               Cow position:
               chrX:9299334-9298978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               245
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               2-344
               

               Cow position:
               chrX:20383024-20382690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 142
               

               Conread position:
               2-344
               

               Cow position:
               chrX:44019208-44019554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               47, 20
               

               Conread position:
               2-345
               

               Cow position:
               chrX:502071-501731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 172
               

               Conread position:
               2-345
               

               Cow position:
               chrX:9439028-9439381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               63, 324
               

               Conread position:
               2-346
               

               Cow position:
               chrX:508647-508298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               123, 108
               

               Conread position:
               2-346
               

               Cow position:
               chrX:1518935-1518582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               23, 309
               

               Conread position:
               2-346
               

               Cow position:
               chrX:3154742-3154390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 299
               

               Conread position:
               2-346
               

               Cow position:
               chrX:3161500-3161157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 83
               

               Conread position:
               2-346
               

               Cow position:
               chrX:3208048-3207705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               134, 46
               

               Conread position:
               2-346
               

               Cow position:
               chrX:5246761-5247119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               251
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               131, 301
               

               Conread position:
               2-346
               

               Cow position:
               chrX:6012593-6012249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 47
               

               Conread position:
               2-346
               

               Cow position:
               chrX:9403615-9403974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               2-346
               

               Cow position:
               chrX:12852993-12852653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               154, 65
               

               Conread position:
               2-346
               

               Cow position:
               chrX:16354843-16354491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               237
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               29, 81
               

               Conread position:
               2-346
               

               Cow position:
               chrX:19636425-19636766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               240
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               126, 82
               

               Conread position:
               2-346
               

               Cow position:
               chrX:20504275-20504619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 61
               

               Conread position:
               2-346
               

               Cow position:
               chrX:25150701-25151052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               238
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               120, 12
               

               Conread position:
               2-346
               

               Cow position:
               chrX:25281977-25281611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               255
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               131, 319
               

               Conread position:
               2-346
               

               Cow position:
               chrX:25329533-25329870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               127, 75
               

               Conread position:
               2-346
               

               Cow position:
               chrX:25925039-25924680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               2-346
               

               Cow position:
               chrX:32743058-32743395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 71
               

               Conread position:
               2-346
               

               Cow position:
               chrX:33822611-33822956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               127, 77
               

               Conread position:
               2-346
               

               Cow position:
               chrX:34840258-34839920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               243
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               139, 206
               

               Conread position:
               2-346
               

               Cow position:
               chrX:36294647-36294985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               48, 205
               

               Conread position:
               2-346
               

               Cow position:
               chrX:38140527-38140179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               63, 210
               

               Conread position:
               2-346
               

               Cow position:
               chrX:41733682-41733331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               119, 75
               

               Conread position:
               2-346
               

               Cow position:
               chrX:43648243-43647886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               251
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               132, 16
               

               Conread position:
               2-346
               

               Cow position:
               chrX:43789344-43789001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               33, 38
               

               Conread position:
               2-356
               

               Cow position:
               chrX:27323347-27323001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               131, 65
               

               Conread position:
               2-356
               

               Cow position:
               chrX:35937552-35937209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               7, 111
               

               Conread position:
               2-366
               

               Cow position:
               chrX:39546467-39546097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 300
               

               Conread position:
               2-367
               

               Cow position:
               chrX:22330064-22329691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               69, 212
               

               Conread position:
               2-370
               

               Cow position:
               chrX:27760854-27761221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 82
               

               Conread position:
               2-373
               

               Cow position:
               chrX:20957528-20957897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 203
               

               Conread position:
               2-388
               

               Cow position:
               chrX:41304230-41303847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               265
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               134, 88
               

               Conread position:
               2-391
               

               Cow position:
               chrX:4630187-4629787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               3-112
               

               Cow position:
               chrX:10301634-10301742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               3-112
               

               Cow position:
               chrX:31496250-31496359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-117
               

               Cow position:
               chrX:11844850-11844737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               3-117
               

               Cow position:
               chrX:13030697-13030583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-117
               

               Cow position:
               chrX:37080005-37079891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               89
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-122
               

               Cow position:
               chrX:40790016-40789899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               3-131
               

               Cow position:
               chrX:1958475-1958346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               3-131
               

               Cow position:
               chrX:34663459-34663330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               3-131
               

               Cow position:
               chrX:36479121-36478993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-131
               

               Cow position:
               chrX:40187492-40187620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-134
               

               Cow position:
               chrX:10465299-10465430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-153
               

               Cow position:
               chrX:777028-777179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               3-154
               

               Cow position:
               chrX:31435841-31435991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               3-155
               

               Cow position:
               chrX:9227567-9227415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-156
               

               Cow position:
               chrX:29083592-29083746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               54, 134
               

               Conread position:
               3-163
               

               Cow position:
               chrX:5392061-5391901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-163
               

               Cow position:
               chrX:9161106-9160944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               3-163
               

               Cow position:
               chrX:35272881-35273042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               3-167
               

               Cow position:
               chrX:5639423-5639258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               3-167
               

               Cow position:
               chrX:16782794-16782958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-167
               

               Cow position:
               chrX:45421485-45421319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 5
               

               Conread position:
               3-168
               

               Cow position:
               chrX:38007464-38007299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-169
               

               Cow position:
               chrX:28558401-28558565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               3-169
               

               Cow position:
               chrX:45976071-45976239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               110, 135
               

               Conread position:
               3-175
               

               Cow position:
               chrX:38584241-38584413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-177
               

               Cow position:
               chrX:2293086-2292912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-179
               

               Cow position:
               chrX:12996345-12996171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               3-184
               

               Cow position:
               chrX:29907688-29907507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               116, 127
               

               Conread position:
               3-184
               

               Cow position:
               chrX:31251779-31251960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-187
               

               Cow position:
               chrX:21459091-21458907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-189
               

               Cow position:
               chrX:35260490-35260677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               151
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               177, 0
               

               Conread position:
               3-190
               

               Cow position:
               chrX:19333631-19333444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               149
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-201
               

               Cow position:
               chrX:21596051-21596249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               59, 31
               

               Conread position:
               3-201
               

               Cow position:
               chrX:30833917-30833710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               80, 62
               

               Conread position:
               3-202
               

               Cow position:
               chrX:3211032-3210831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               127, 136
               

               Conread position:
               3-206
               

               Cow position:
               chrX:17231014-17231217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-208
               

               Cow position:
               chrX:16808321-16808117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               143, 51
               

               Conread position:
               3-213
               

               Cow position:
               chrX:10960172-10960389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               171
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               129, 119
               

               Conread position:
               3-214
               

               Cow position:
               chrX:38642534-38642750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               3-216
               

               Cow position:
               chrX:9641918-9641705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-217
               

               Cow position:
               chrX:37831958-37831739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               120, 18
               

               Conread position:
               3-217
               

               Cow position:
               chrX:39125825-39126048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               18, 49
               

               Conread position:
               3-218
               

               Cow position:
               chrX:37753883-37754099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               129, 45
               

               Conread position:
               3-219
               

               Cow position:
               chrX:6581448-6581664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-219
               

               Cow position:
               chrX:11115655-11115437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 27
               

               Conread position:
               3-219
               

               Cow position:
               chrX:21025526-21025312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               71, 148
               

               Conread position:
               3-227
               

               Cow position:
               chrX:3813055-3813288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               3-228
               

               Cow position:
               chrX:32329538-32329760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-228
               

               Cow position:
               chrX:45992760-45992989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               3-232
               

               Cow position:
               chrX:32623075-32623308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               62, 29
               

               Conread position:
               3-233
               

               Cow position:
               chrX:18488200-18487970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-233
               

               Cow position:
               chrX:23988055-23988281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               3-233
               

               Cow position:
               chrX:33493246-33493476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-233
               

               Cow position:
               chrX:38961332-38961102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-234
               

               Cow position:
               chrX:23666697-23666928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               128, 101
               

               Conread position:
               3-238
               

               Cow position:
               chrX:28706616-28706851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-241
               

               Cow position:
               chrX:1499102-1499346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               3-242
               

               Cow position:
               chrX:11455553-11455316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               3-245
               

               Cow position:
               chrX:37489240-37489474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               56, 91
               

               Conread position:
               3-246
               

               Cow position:
               chrX:22901151-22900902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               74, 139
               

               Conread position:
               3-247
               

               Cow position:
               chrX:13030127-13029883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-247
               

               Cow position:
               chrX:24366438-24366193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 234
               

               Conread position:
               3-248
               

               Cow position:
               chrX:4482465-4482697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               3-248
               

               Cow position:
               chrX:13359906-13360152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               126, 64
               

               Conread position:
               3-248
               

               Cow position:
               chrX:17663404-17663153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               3-248
               

               Cow position:
               chrX:42499560-42499306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               3-248
               

               Cow position:
               chrX:44961227-44961472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-249
               

               Cow position:
               chrX:16086609-16086364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               3-251
               

               Cow position:
               chrX:25816741-25816496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 0
               

               Conread position:
               3-252
               

               Cow position:
               chrX:11855683-11855929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 0
               

               Conread position:
               3-252
               

               Cow position:
               chrX:23969871-23970121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-252
               

               Cow position:
               chrX:38840364-38840620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 6
               

               Conread position:
               3-252
               

               Cow position:
               chrX:44901658-44901911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               191
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               121, 236
               

               Conread position:
               3-255
               

               Cow position:
               chrX:7424941-7425196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               113, 44
               

               Conread position:
               3-255
               

               Cow position:
               chrX:13058073-13058330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 94
               

               Conread position:
               3-255
               

               Cow position:
               chrX:28624245-28623996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               85, 78
               

               Conread position:
               3-255
               

               Cow position:
               chrX:29602526-29602283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               3-255
               

               Cow position:
               chrX:33538440-33538694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-255
               

               Cow position:
               chrX:35847730-35847981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               3-256
               

               Cow position:
               chrX:3596553-3596300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-256
               

               Cow position:
               chrX:19929943-19930197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               131, 45
               

               Conread position:
               3-256
               

               Cow position:
               chrX:30688579-30688832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-256
               

               Cow position:
               chrX:38548921-38549180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 77
               

               Conread position:
               3-259
               

               Cow position:
               chrX:6695836-6695575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 204
               

               Conread position:
               3-259
               

               Cow position:
               chrX:7513006-7513262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 32
               

               Conread position:
               3-259
               

               Cow position:
               chrX:16790303-16790052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               176, 133
               

               Conread position:
               3-259
               

               Cow position:
               chrX:38934768-38935025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               3-259
               

               Cow position:
               chrX:39558851-39558597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               3-259
               

               Cow position:
               chrX:47243791-47243533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 201
               

               Conread position:
               3-262
               

               Cow position:
               chrX:30825162-30825421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-265
               

               Cow position:
               chrX:39757547-39757809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-267
               

               Cow position:
               chrX:4750858-4750601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               3-268
               

               Cow position:
               chrX:16410354-16410615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               119, 180
               

               Conread position:
               3-268
               

               Cow position:
               chrX:24205513-24205786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               51, 108
               

               Conread position:
               3-269
               

               Cow position:
               chrX:2048617-2048889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 0
               

               Conread position:
               3-269
               

               Cow position:
               chrX:13266316-13266044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 75
               

               Conread position:
               3-269
               

               Cow position:
               chrX:22603924-22603659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               3-269
               

               Cow position:
               chrX:28503850-28504106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               3-269
               

               Cow position:
               chrX:37572678-37572944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-270
               

               Cow position:
               chrX:40717454-40717718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               237, 114
               

               Conread position:
               3-272
               

               Cow position:
               chrX:8869871-8869601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 125
               

               Conread position:
               3-278
               

               Cow position:
               chrX:45658566-45658290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               113, 135
               

               Conread position:
               3-279
               

               Cow position:
               chrX:8806825-8806547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               54, 25
               

               Conread position:
               3-279
               

               Cow position:
               chrX:37905519-37905809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               3-284
               

               Cow position:
               chrX:8483604-8483883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-284
               

               Cow position:
               chrX:12691145-12690864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-284
               

               Cow position:
               chrX:27105375-27105092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               119, 25
               

               Conread position:
               3-285
               

               Cow position:
               chrX:11461357-11461076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 112
               

               Conread position:
               3-285
               

               Cow position:
               chrX:25039096-25039380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               122, 69
               

               Conread position:
               3-285
               

               Cow position:
               chrX:39292229-39291947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-287
               

               Cow position:
               chrX:2715136-2715420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-287
               

               Cow position:
               chrX:40224729-40224445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-288
               

               Cow position:
               chrX:160942-161227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-288
               

               Cow position:
               chrX:3405842-3405558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 279
               

               Conread position:
               3-288
               

               Cow position:
               chrX:4996129-4996410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 76
               

               Conread position:
               3-288
               

               Cow position:
               chrX:6406860-6407142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 50
               

               Conread position:
               3-288
               

               Cow position:
               chrX:6558364-6558649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-288
               

               Cow position:
               chrX:8591056-8591339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 64
               

               Conread position:
               3-288
               

               Cow position:
               chrX:10416011-10415727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               3-288
               

               Cow position:
               chrX:11373485-11373207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               57, 27
               

               Conread position:
               3-288
               

               Cow position:
               chrX:13648270-13647985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-288
               

               Cow position:
               chrX:16345433-16345721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               122, 182
               

               Conread position:
               3-288
               

               Cow position:
               chrX:23382669-23382373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               57, 256
               

               Conread position:
               3-288
               

               Cow position:
               chrX:25575473-25575760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 260
               

               Conread position:
               3-288
               

               Cow position:
               chrX:27705107-27705392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 106
               

               Conread position:
               3-288
               

               Cow position:
               chrX:28313939-28314224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-288
               

               Cow position:
               chrX:34222265-34222548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 100
               

               Conread position:
               3-288
               

               Cow position:
               chrX:35223816-35224100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 0
               

               Conread position:
               3-288
               

               Cow position:
               chrX:36250350-36250063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               3-288
               

               Cow position:
               chrX:38051918-38051633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-288
               

               Cow position:
               chrX:38852673-38852955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 0
               

               Conread position:
               3-288
               

               Cow position:
               chrX:41762296-41762032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               3-288
               

               Cow position:
               chrX:44930154-44930434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               40, 81
               

               Conread position:
               3-290
               

               Cow position:
               chrX:3653288-3653565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 59
               

               Conread position:
               3-290
               

               Cow position:
               chrX:8325790-8326060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               3-290
               

               Cow position:
               chrX:10256628-10256342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 204
               

               Conread position:
               3-290
               

               Cow position:
               chrX:30093850-30093564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 232
               

               Conread position:
               3-290
               

               Cow position:
               chrX:37071914-37072207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               3-291
               

               Cow position:
               chrX:17291444-17291732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-291
               

               Cow position:
               chrX:22521707-22521419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-291
               

               Cow position:
               chrX:22522317-22522029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-301
               

               Cow position:
               chrX:38940890-38941190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               3-319
               

               Cow position:
               chrX:14030532-14030846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-319
               

               Cow position:
               chrX:39185687-39186003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-324
               

               Cow position:
               chrX:2351576-2351897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-324
               

               Cow position:
               chrX:21862156-21861838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 179
               

               Conread position:
               3-324
               

               Cow position:
               chrX:24975458-24975771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 112
               

               Conread position:
               3-324
               

               Cow position:
               chrX:26617407-26617086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-324
               

               Cow position:
               chrX:48423449-48423770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-335
               

               Cow position:
               chrX:3223534-3223205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               133, 250
               

               Conread position:
               3-335
               

               Cow position:
               chrX:28752826-28752494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 296
               

               Conread position:
               3-343
               

               Cow position:
               chrX:7695294-7695613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               242
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               3-343
               

               Cow position:
               chrX:34564814-34565146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 232
               

               Conread position:
               3-346
               

               Cow position:
               chrX:3396260-3395906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               130, 290
               

               Conread position:
               3-346
               

               Cow position:
               chrX:4665107-4664760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               54, 59
               

               Conread position:
               3-346
               

               Cow position:
               chrX:12290251-12290592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 204
               

               Conread position:
               3-346
               

               Cow position:
               chrX:13912607-13912937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               278, 120
               

               Conread position:
               3-346
               

               Cow position:
               chrX:15379888-15380237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               119, 228
               

               Conread position:
               3-346
               

               Cow position:
               chrX:23514961-23514614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               128, 60
               

               Conread position:
               3-346
               

               Cow position:
               chrX:24888621-24888277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               119, 170
               

               Conread position:
               3-346
               

               Cow position:
               chrX:30052955-30052612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-346
               

               Cow position:
               chrX:33003766-33004113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               123, 25
               

               Conread position:
               3-346
               

               Cow position:
               chrX:35288168-35288516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 230
               

               Conread position:
               3-346
               

               Cow position:
               chrX:41106503-41106152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               118, 310
               

               Conread position:
               3-347
               

               Cow position:
               chrX:3417624-3417281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 64
               

               Conread position:
               3-347
               

               Cow position:
               chrX:4633343-4632993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 228
               

               Conread position:
               3-347
               

               Cow position:
               chrX:13177945-13177607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               255
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               139, 18
               

               Conread position:
               3-347
               

               Cow position:
               chrX:28866470-28866138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 49
               

               Conread position:
               3-347
               

               Cow position:
               chrX:42470422-42470079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               310, 19
               

               Conread position:
               3-348
               

               Cow position:
               chrX:878856-878514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 125
               

               Conread position:
               3-348
               

               Cow position:
               chrX:1055878-1055531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 80
               

               Conread position:
               3-348
               

               Cow position:
               chrX:1550461-1550809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-348
               

               Cow position:
               chrX:1976083-1975738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chrX:2664523-2664868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chrX:3387620-3387965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-348
               

               Cow position:
               chrX:3649294-3648950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 0
               

               Conread position:
               3-348
               

               Cow position:
               chrX:5280339-5279996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chrX:8641302-8641647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chrX:10923057-10922712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chrX:11715948-11715603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-348
               

               Cow position:
               chrX:12249316-12249662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 29
               

               Conread position:
               3-348
               

               Cow position:
               chrX:12466009-12466353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 0
               

               Conread position:
               3-348
               

               Cow position:
               chrX:14458653-14458309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chrX:14781832-14781486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 134
               

               Conread position:
               3-348
               

               Cow position:
               chrX:15781095-15781440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chrX:17497610-17497955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-348
               

               Cow position:
               chrX:18451565-18451220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chrX:20098836-20099181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chrX:24173651-24173310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               3-348
               

               Cow position:
               chrX:24292165-24291823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               76, 148
               

               Conread position:
               3-348
               

               Cow position:
               chrX:24424883-24424529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 218
               

               Conread position:
               3-348
               

               Cow position:
               chrX:24467611-24467266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chrX:25337715-25338038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 49
               

               Conread position:
               3-348
               

               Cow position:
               chrX:26506427-26506085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chrX:27446209-27446547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 71
               

               Conread position:
               3-348
               

               Cow position:
               chrX:27997165-27997505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 7
               

               Conread position:
               3-348
               

               Cow position:
               chrX:28588485-28588829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 74
               

               Conread position:
               3-348
               

               Cow position:
               chrX:29912853-29913198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-348
               

               Cow position:
               chrX:30965615-30965960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chrX:32871272-32870928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 0
               

               Conread position:
               3-348
               

               Cow position:
               chrX:37061277-37060932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chrX:37772920-37772575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chrX:37852653-37852994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chrX:38330896-38331241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-348
               

               Cow position:
               chrX:45430508-45430158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 18
               

               Conread position:
               3-349
               

               Cow position:
               chrX:2103919-2104265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-349
               

               Cow position:
               chrX:6543771-6544116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 81
               

               Conread position:
               3-349
               

               Cow position:
               chrX:7277447-7277779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 64
               

               Conread position:
               3-349
               

               Cow position:
               chrX:23135090-23135432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 139
               

               Conread position:
               3-349
               

               Cow position:
               chrX:29049491-29049828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 39
               

               Conread position:
               3-349
               

               Cow position:
               chrX:35409188-35409523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               3-349
               

               Cow position:
               chrX:37014594-37014936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               137, 59
               

               Conread position:
               3-349
               

               Cow position:
               chrX:41122584-41122930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 141
               

               Conread position:
               3-350
               

               Cow position:
               chrX:27749495-27749146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-351
               

               Cow position:
               chrX:19399292-19399640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-356
               

               Cow position:
               chrX:45413135-45412788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               3-367
               

               Cow position:
               chrX:18656291-18655927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-367
               

               Cow position:
               chrX:20801287-20801656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               262
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               125, 25
               

               Conread position:
               3-367
               

               Cow position:
               chrX:29169827-29169456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 138
               

               Conread position:
               3-367
               

               Cow position:
               chrX:37764683-37764319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-368
               

               Cow position:
               chrX:671495-671130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 27
               

               Conread position:
               3-369
               

               Cow position:
               chrX:3157132-3157498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-369
               

               Cow position:
               chrX:5408569-5408935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 130
               

               Conread position:
               3-369
               

               Cow position:
               chrX:11358551-11358185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-369
               

               Cow position:
               chrX:22557015-22557381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-369
               

               Cow position:
               chrX:27305441-27305806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-369
               

               Cow position:
               chrX:34761580-34761946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-369
               

               Cow position:
               chrX:42459686-42460060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-369
               

               Cow position:
               chrX:46297174-46297540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:361939-361572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:1576749-1576382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:2151418-2151052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:2274431-2274798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:2932206-2931838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:3096241-3095889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 203
               

               Conread position:
               3-370
               

               Cow position:
               chrX:3361335-3361699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 119
               

               Conread position:
               3-370
               

               Cow position:
               chrX:3372339-3371977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:4343263-4343630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:4622440-4622073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:4869072-4869424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               250
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:5123845-5123480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:5334305-5333940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:5406574-5406936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 7
               

               Conread position:
               3-370
               

               Cow position:
               chrX:5423552-5423185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:5599464-5599097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:5646590-5646223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:5866660-5867026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:5892742-5893109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:6196240-6195873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:6372695-6373061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               358, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:6454210-6454576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 92
               

               Conread position:
               3-370
               

               Cow position:
               chrX:6566588-6566955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:6870049-6869681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:7096972-7097338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:7119130-7118763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:7805890-7806259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 220
               

               Conread position:
               3-370
               

               Cow position:
               chrX:9011841-9012208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:9018789-9018422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:9085819-9085452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:9153874-9154241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:9169100-9168733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:10351375-10351742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:10428054-10428420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:10444901-10444533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:10915552-10915919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:10932187-10932553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 64
               

               Conread position:
               3-370
               

               Cow position:
               chrX:11145823-11145457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 64
               

               Conread position:
               3-370
               

               Cow position:
               chrX:11566428-11566795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:12001633-12001266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:12145609-12145975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:12360402-12360770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:12458211-12458579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 134
               

               Conread position:
               3-370
               

               Cow position:
               chrX:13091650-13091281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 136
               

               Conread position:
               3-370
               

               Cow position:
               chrX:13971725-13971346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 145
               

               Conread position:
               3-370
               

               Cow position:
               chrX:14122237-14121871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:14133989-14134356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:14462823-14463194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 137
               

               Conread position:
               3-370
               

               Cow position:
               chrX:14598360-14598726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 123
               

               Conread position:
               3-370
               

               Cow position:
               chrX:14801304-14800937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:15091255-15090886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:15260105-15259738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:15346455-15346088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:15439123-15438772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 64
               

               Conread position:
               3-370
               

               Cow position:
               chrX:15531638-15531274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:15621018-15620650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:16046661-16047030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:16074102-16074457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:16279165-16279530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 16
               

               Conread position:
               3-370
               

               Cow position:
               chrX:16285725-16286090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:16359495-16359134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 137
               

               Conread position:
               3-370
               

               Cow position:
               chrX:16465814-16466182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:16478429-16478783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:16735038-16735405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:17055083-17055450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:17994973-17995340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:18024554-18024920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:18462461-18462094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:19022795-19022428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:19109527-19109160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:19473646-19473279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 103
               

               Conread position:
               3-370
               

               Cow position:
               chrX:20021091-20021444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:20032317-20031950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:21343908-21344275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:21686133-21686495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 134
               

               Conread position:
               3-370
               

               Cow position:
               chrX:21768318-21768685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:22077841-22078208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:22568503-22568138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:22609078-22608711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:22612900-22613267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:22772169-22772536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:22888172-22888540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:23109278-23109640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 45
               

               Conread position:
               3-370
               

               Cow position:
               chrX:23986763-23987125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:24320758-24320395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:24447326-24447682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 64
               

               Conread position:
               3-370
               

               Cow position:
               chrX:24509381-24509748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:24769346-24768983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:24969302-24968935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:25276985-25276618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:26275653-26276020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:26760054-26759688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:26974424-26974791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:27404431-27404065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:27422767-27422401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:27594666-27594301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:27759221-27759588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 130
               

               Conread position:
               3-370
               

               Cow position:
               chrX:28513587-28513952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:28518207-28517844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 64
               

               Conread position:
               3-370
               

               Cow position:
               chrX:28559320-28558956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 120
               

               Conread position:
               3-370
               

               Cow position:
               chrX:29777556-29777922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 231
               

               Conread position:
               3-370
               

               Cow position:
               chrX:29841655-29841288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:29903256-29903624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:30159481-30159130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 103
               

               Conread position:
               3-370
               

               Cow position:
               chrX:30172194-30171829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 74
               

               Conread position:
               3-370
               

               Cow position:
               chrX:30196811-30197178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:30199478-30199111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 299
               

               Conread position:
               3-370
               

               Cow position:
               chrX:30752288-30752655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:30822098-30822465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:30836887-30837254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:30940695-30941062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:31261122-31260749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 64
               

               Conread position:
               3-370
               

               Cow position:
               chrX:31605198-31605565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:31814375-31814008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:31978327-31977965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:32039328-32038962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 94
               

               Conread position:
               3-370
               

               Cow position:
               chrX:32331145-32331508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:33763858-33764225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:34519240-34519607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:35533365-35533732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:36195606-36195973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:36535221-36534854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:36729898-36730265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:37816103-37816469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               3-370
               

               Cow position:
               chrX:37958011-37958378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:38014608-38014975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:38230753-38230386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:39560138-39559772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:40591200-40591567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:41488651-41488284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:42120817-42121184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:42591239-42591606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:43510930-43511300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 236
               

               Conread position:
               3-370
               

               Cow position:
               chrX:44168796-44168428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-370
               

               Cow position:
               chrX:45236980-45237347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               351, 343
               

               Conread position:
               3-370
               

               Cow position:
               chrX:45903691-45904059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 134
               

               Conread position:
               3-370
               

               Cow position:
               chrX:47317920-47318287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-372
               

               Cow position:
               chrX:5289173-5288804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 138
               

               Conread position:
               3-372
               

               Cow position:
               chrX:15173013-15172650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-372
               

               Cow position:
               chrX:29225992-29226359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 55
               

               Conread position:
               3-373
               

               Cow position:
               chrX:7677483-7677853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 68
               

               Conread position:
               3-373
               

               Cow position:
               chrX:8782258-8782628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-373
               

               Cow position:
               chrX:12347391-12347762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 134
               

               Conread position:
               3-373
               

               Cow position:
               chrX:15114185-15114555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 127
               

               Conread position:
               3-373
               

               Cow position:
               chrX:18222927-18223296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-373
               

               Cow position:
               chrX:20742501-20742870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               3-373
               

               Cow position:
               chrX:24735458-24735822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 64
               

               Conread position:
               3-373
               

               Cow position:
               chrX:28024777-28025145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-373
               

               Cow position:
               chrX:30816755-30816385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-373
               

               Cow position:
               chrX:39714065-39714433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 102
               

               Conread position:
               3-374
               

               Cow position:
               chrX:24317580-24317945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 49
               

               Conread position:
               3-378
               

               Cow position:
               chrX:41433895-41433535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               3-379
               

               Cow position:
               chrX:9651532-9651156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 255
               

               Conread position:
               3-379
               

               Cow position:
               chrX:22115770-22115392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 27
               

               Conread position:
               3-381
               

               Cow position:
               chrX:41156825-41157203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-384
               

               Cow position:
               chrX:31777921-31777539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               252
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               106, 56
               

               Conread position:
               3-386
               

               Cow position:
               chrX:5306115-5306496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 69
               

               Conread position:
               3-386
               

               Cow position:
               chrX:10528260-10527878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-386
               

               Cow position:
               chrX:13071090-13070705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 136
               

               Conread position:
               3-387
               

               Cow position:
               chrX:14908525-14908912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 193
               

               Conread position:
               3-387
               

               Cow position:
               chrX:19437571-19437182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               268
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               88, 20
               

               Conread position:
               3-388
               

               Cow position:
               chrX:25289165-25288780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-393
               

               Cow position:
               chrX:3081617-3081227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               143, 133
               

               Conread position:
               3-393
               

               Cow position:
               chrX:42086377-42086765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 85
               

               Conread position:
               3-418
               

               Cow position:
               chrX:30139270-30138855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-436
               

               Cow position:
               chrX:11083096-11082670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 59
               

               Conread position:
               3-459
               

               Cow position:
               chrX:3654123-3654575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 25
               

               Conread position:
               3-459
               

               Cow position:
               chrX:15140034-15139578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 64
               

               Conread position:
               3-459
               

               Cow position:
               chrX:21592801-21593255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 64
               

               Conread position:
               3-459
               

               Cow position:
               chrX:42462235-42461777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 403
               

               Conread position:
               3-468
               

               Cow position:
               chrX:12309872-12309407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 113
               

               Conread position:
               3-473
               

               Cow position:
               chrX:11073695-11073209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 45
               

               Conread position:
               3-477
               

               Cow position:
               chrX:34754678-34754201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 294
               

               Conread position:
               3-478
               

               Cow position:
               chrX:24105142-24105613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               310, 46
               

               Conread position:
               3-478
               

               Cow position:
               chrX:40452706-40452220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 74
               

               Conread position:
               3-478
               

               Cow position:
               chrX:40481356-40480878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 74
               

               Conread position:
               3-480
               

               Cow position:
               chrX:1810646-1810172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 137
               

               Conread position:
               3-480
               

               Cow position:
               chrX:11655591-11656083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 286
               

               Conread position:
               3-480
               

               Cow position:
               chrX:12115555-12116037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 254
               

               Conread position:
               3-480
               

               Cow position:
               chrX:14884448-14883967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 175
               

               Conread position:
               3-480
               

               Cow position:
               chrX:35388396-35387911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 135
               

               Conread position:
               3-483
               

               Cow position:
               chrX:10412457-10411992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 64
               

               Conread position:
               3-483
               

               Cow position:
               chrX:38439002-38439472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 38
               

               Conread position:
               3-488
               

               Cow position:
               chrX:7571417-7571904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 350
               

               Conread position:
               3-490
               

               Cow position:
               chrX:42994137-42994614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 26
               

               Conread position:
               3-491
               

               Cow position:
               chrX:22812576-22813067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               390, 283
               

               Conread position:
               3-491
               

               Cow position:
               chrX:31489025-31489519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 307
               

               Conread position:
               3-491
               

               Cow position:
               chrX:35609500-35609991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 296
               

               Conread position:
               3-491
               

               Cow position:
               chrX:46533006-46532496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               513
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 288
               

               Conread position:
               3-492
               

               Cow position:
               chrX:5871831-5872322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 92
               

               Conread position:
               3-492
               

               Cow position:
               chrX:29289091-29289583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 64
               

               Conread position:
               3-492
               

               Cow position:
               chrX:31949415-31948935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               310, 47
               

               Conread position:
               3-492
               

               Cow position:
               chrX:38072253-38071762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 229
               

               Conread position:
               3-496
               

               Cow position:
               chrX:23572286-23571788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               385, 479
               

               Conread position:
               3-496
               

               Cow position:
               chrX:38963627-38964113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 115
               

               Conread position:
               3-497
               

               Cow position:
               chrX:20340376-20339885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 134
               

               Conread position:
               3-498
               

               Cow position:
               chrX:38227579-38227084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               506
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 325
               

               Conread position:
               3-501
               

               Cow position:
               chrX:34554250-34554738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 36
               

               Conread position:
               3-518
               

               Cow position:
               chrX:40827232-40826727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               520
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 117
               

               Conread position:
               3-525
               

               Cow position:
               chrX:41526997-41526483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               529
               

               Alignm identity:
               321
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               408, 62
               

               Conread position:
               3-525
               

               Cow position:
               chrX:41790922-41790412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               535
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 108
               

               Conread position:
               3-529
               

               Cow position:
               chrX:34797548-34798074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               527
               

               Alignm identity:
               150
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-122
               

               Cow position:
               chrX:11632162-11632280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-129
               

               Cow position:
               chrX:12095070-12094945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-131
               

               Cow position:
               chrX:26508752-26508881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               4-170
               

               Cow position:
               chrX:23908660-23908490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               4-181
               

               Cow position:
               chrX:12823515-12823698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               132, 118
               

               Conread position:
               4-204
               

               Cow position:
               chrX:2579934-2580133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               142, 57
               

               Conread position:
               4-217
               

               Cow position:
               chrX:40279317-40279534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               126, 160
               

               Conread position:
               4-243
               

               Cow position:
               chrX:37781564-37781331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               4-246
               

               Cow position:
               chrX:39352140-39351891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               111, 239
               

               Conread position:
               4-246
               

               Cow position:
               chrX:46701573-46701336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               13, 61
               

               Conread position:
               4-259
               

               Cow position:
               chrX:41067348-41067609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               4-284
               

               Cow position:
               chrX:35025322-35025596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 63
               

               Conread position:
               4-285
               

               Cow position:
               chrX:28646468-28646190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 150
               

               Conread position:
               4-287
               

               Cow position:
               chrX:31460355-31460627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               36, 76
               

               Conread position:
               4-288
               

               Cow position:
               chrX:16040165-16039881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 132
               

               Conread position:
               4-288
               

               Cow position:
               chrX:34990575-34990840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               4-288
               

               Cow position:
               chrX:39383567-39383280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               118, 63
               

               Conread position:
               4-289
               

               Cow position:
               chrX:1655003-1655280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               4-322
               

               Cow position:
               chrX:35680860-35681179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 63
               

               Conread position:
               4-343
               

               Cow position:
               chrX:43217906-43218249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               77, 39
               

               Conread position:
               4-346
               

               Cow position:
               chrX:529313-529656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 265
               

               Conread position:
               4-346
               

               Cow position:
               chrX:18684294-18684632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               240
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               121, 170
               

               Conread position:
               4-346
               

               Cow position:
               chrX:18990259-18989943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               249
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               250, 63
               

               Conread position:
               4-346
               

               Cow position:
               chrX:20970434-20970780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               124, 315
               

               Conread position:
               4-346
               

               Cow position:
               chrX:26878176-26878522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 61
               

               Conread position:
               4-346
               

               Cow position:
               chrX:27135812-27135474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               124, 44
               

               Conread position:
               4-347
               

               Cow position:
               chrX:33614912-33615263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               239
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               64, 146
               

               Conread position:
               4-348
               

               Cow position:
               chrX:23414873-23414511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               89, 310
               

               Conread position:
               4-348
               

               Cow position:
               chrX:35268410-35268746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               4-348
               

               Cow position:
               chrX:41049622-41049974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 302
               

               Conread position:
               4-349
               

               Cow position:
               chrX:45113149-45113488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 233
               

               Conread position:
               4-356
               

               Cow position:
               chrX:5320204-5319850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 80
               

               Conread position:
               4-367
               

               Cow position:
               chrX:30919877-30919514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               128, 46
               

               Conread position:
               4-370
               

               Cow position:
               chrX:2559445-2559082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 0
               

               Conread position:
               4-370
               

               Cow position:
               chrX:3464561-3464197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               321, 0
               

               Conread position:
               4-370
               

               Cow position:
               chrX:8530055-8530421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 132
               

               Conread position:
               4-370
               

               Cow position:
               chrX:24413545-24413911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               311, 298
               

               Conread position:
               4-379
               

               Cow position:
               chrX:45043073-45043448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               247
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               279, 272
               

               Conread position:
               4-384
               

               Cow position:
               chrX:2524220-2523835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 301
               

               Conread position:
               4-388
               

               Cow position:
               chrX:9252656-9252280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               306, 102
               

               Conread position:
               4-388
               

               Cow position:
               chrX:17965001-17964624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 100
               

               Conread position:
               4-467
               

               Cow position:
               chrX:15120372-15119906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               387, 63
               

               Conread position:
               4-477
               

               Cow position:
               chrX:44054319-44054795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 232
               

               Conread position:
               4-519
               

               Cow position:
               chrX:40268991-40269516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               529
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               306, 295
               

               Conread position:
               5-121
               

               Cow position:
               chrX:45400523-45400408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               5-123
               

               Cow position:
               chrX:12179190-12179309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               5-123
               

               Cow position:
               chrX:16290497-16290379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-131
               

               Cow position:
               chrX:16514731-16514606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               5-131
               

               Cow position:
               chrX:38794012-38794137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               5-132
               

               Cow position:
               chrX:14924552-14924679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-132
               

               Cow position:
               chrX:44396462-44396588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               5-147
               

               Cow position:
               chrX:40559747-40559605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-153
               

               Cow position:
               chrX:26764576-26764428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-155
               

               Cow position:
               chrX:22771618-22771465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               5-160
               

               Cow position:
               chrX:39702364-39702514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               56, 63
               

               Conread position:
               5-164
               

               Cow position:
               chrX:30060404-30060563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-173
               

               Cow position:
               chrX:29859431-29859263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               141, 131
               

               Conread position:
               5-181
               

               Cow position:
               chrX:12033416-12033235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               131, 62
               

               Conread position:
               5-186
               

               Cow position:
               chrX:865912-866093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-189
               

               Cow position:
               chrX:36202907-36203089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               5-201
               

               Cow position:
               chrX:18194206-18194402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               156
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               141, 124
               

               Conread position:
               5-206
               

               Cow position:
               chrX:37906472-37906669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               116, 36
               

               Conread position:
               5-219
               

               Cow position:
               chrX:17609943-17609724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               123, 72
               

               Conread position:
               5-228
               

               Cow position:
               chrX:20726276-20726499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 47
               

               Conread position:
               5-231
               

               Cow position:
               chrX:21501134-21501365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               117, 88
               

               Conread position:
               5-233
               

               Cow position:
               chrX:21662611-21662839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 130
               

               Conread position:
               5-233
               

               Cow position:
               chrX:33707914-33708139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               153, 67
               

               Conread position:
               5-236
               

               Cow position:
               chrX:20954044-20954273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               67, 46
               

               Conread position:
               5-240
               

               Cow position:
               chrX:13405781-13405545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               5-247
               

               Cow position:
               chrX:9911258-9911009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               119, 218
               

               Conread position:
               5-247
               

               Cow position:
               chrX:16324737-16324489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               5-248
               

               Cow position:
               chrX:37955414-37955661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               129, 47
               

               Conread position:
               5-248
               

               Cow position:
               chrX:39939238-39938991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               137, 211
               

               Conread position:
               5-249
               

               Cow position:
               chrX:3582708-3582957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               134, 62
               

               Conread position:
               5-249
               

               Cow position:
               chrX:17122522-17122273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               139, 74
               

               Conread position:
               5-252
               

               Cow position:
               chrX:26752403-26752154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               5-253
               

               Cow position:
               chrX:6279092-6278852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               5-254
               

               Cow position:
               chrX:20131374-20131115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               86, 71
               

               Conread position:
               5-259
               

               Cow position:
               chrX:323431-323685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-259
               

               Cow position:
               chrX:31745981-31745727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-260
               

               Cow position:
               chrX:24826848-24827112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               5-261
               

               Cow position:
               chrX:26749362-26749101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               135, 59
               

               Conread position:
               5-266
               

               Cow position:
               chrX:47144592-47144859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               156, 128
               

               Conread position:
               5-267
               

               Cow position:
               chrX:19400340-19400608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               121, 144
               

               Conread position:
               5-269
               

               Cow position:
               chrX:41192205-41192470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               5-274
               

               Cow position:
               chrX:13138700-13138428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 100
               

               Conread position:
               5-274
               

               Cow position:
               chrX:23038481-23038212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-276
               

               Cow position:
               chrX:44874018-44873764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               5-285
               

               Cow position:
               chrX:23341477-23341201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               5-286
               

               Cow position:
               chrX:30228598-30228314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 50
               

               Conread position:
               5-287
               

               Cow position:
               chrX:12008166-12007884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-287
               

               Cow position:
               chrX:23387023-23386741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-287
               

               Cow position:
               chrX:27117479-27117762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 218
               

               Conread position:
               5-288
               

               Cow position:
               chrX:4566414-4566128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               11, 161
               

               Conread position:
               5-288
               

               Cow position:
               chrX:7572896-7573178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               5-288
               

               Cow position:
               chrX:12852181-12851894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               56, 143
               

               Conread position:
               5-288
               

               Cow position:
               chrX:16711471-16711753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               5-288
               

               Cow position:
               chrX:22449430-22449718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               262, 0
               

               Conread position:
               5-288
               

               Cow position:
               chrX:22811402-22811684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 0
               

               Conread position:
               5-288
               

               Cow position:
               chrX:23316904-23316624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 0
               

               Conread position:
               5-288
               

               Cow position:
               chrX:23831928-23831652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               72, 84
               

               Conread position:
               5-288
               

               Cow position:
               chrX:24280450-24280734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               5-288
               

               Cow position:
               chrX:28542378-28542083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 62
               

               Conread position:
               5-288
               

               Cow position:
               chrX:29780261-29780544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-288
               

               Cow position:
               chrX:29942666-29942950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 67
               

               Conread position:
               5-288
               

               Cow position:
               chrX:37134018-37133735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-288
               

               Cow position:
               chrX:44192927-44192644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 141
               

               Conread position:
               5-288
               

               Cow position:
               chrX:47368732-47368450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               120, 231
               

               Conread position:
               5-289
               

               Cow position:
               chrX:2463184-2462903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               117, 139
               

               Conread position:
               5-291
               

               Cow position:
               chrX:2479111-2478826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 0
               

               Conread position:
               5-291
               

               Cow position:
               chrX:14819229-14819514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               5-324
               

               Cow position:
               chrX:525192-525511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 76
               

               Conread position:
               5-324
               

               Cow position:
               chrX:35694555-35694880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               5-324
               

               Cow position:
               chrX:36794510-36794829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-337
               

               Cow position:
               chrX:21973455-21973786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               120, 27
               

               Conread position:
               5-342
               

               Cow position:
               chrX:19447837-19447492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               5-343
               

               Cow position:
               chrX:20976551-20976211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               120, 238
               

               Conread position:
               5-345
               

               Cow position:
               chrX:42841542-42841195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               237
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               123, 33
               

               Conread position:
               5-346
               

               Cow position:
               chrX:10409571-10409225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               52, 61
               

               Conread position:
               5-346
               

               Cow position:
               chrX:10822104-10821761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               108, 23
               

               Conread position:
               5-346
               

               Cow position:
               chrX:11674572-11674922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 16
               

               Conread position:
               5-346
               

               Cow position:
               chrX:15329169-15329509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 275
               

               Conread position:
               5-346
               

               Cow position:
               chrX:17743586-17743917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               131, 118
               

               Conread position:
               5-346
               

               Cow position:
               chrX:18293455-18293788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               130, 45
               

               Conread position:
               5-346
               

               Cow position:
               chrX:24441734-24441390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 142
               

               Conread position:
               5-346
               

               Cow position:
               chrX:37105685-37106030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               5-347
               

               Cow position:
               chrX:20582547-20582888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 44
               

               Conread position:
               5-347
               

               Cow position:
               chrX:32144646-32144305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 42
               

               Conread position:
               5-348
               

               Cow position:
               chrX:626525-626186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 27
               

               Conread position:
               5-348
               

               Cow position:
               chrX:2486114-2485772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 101
               

               Conread position:
               5-348
               

               Cow position:
               chrX:4905474-4905130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               5-348
               

               Cow position:
               chrX:7551279-7550937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 134
               

               Conread position:
               5-348
               

               Cow position:
               chrX:13069229-13068883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               241
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               86, 304
               

               Conread position:
               5-348
               

               Cow position:
               chrX:13089790-13089444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               241
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               86, 304
               

               Conread position:
               5-348
               

               Cow position:
               chrX:14407934-14407593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 294
               

               Conread position:
               5-348
               

               Cow position:
               chrX:16703187-16703529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               5-348
               

               Cow position:
               chrX:18244498-18244844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 273
               

               Conread position:
               5-348
               

               Cow position:
               chrX:19774964-19774621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 131
               

               Conread position:
               5-348
               

               Cow position:
               chrX:22600897-22600558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               5-348
               

               Cow position:
               chrX:23280523-23280865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               5-348
               

               Cow position:
               chrX:25205220-25205577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 33
               

               Conread position:
               5-348
               

               Cow position:
               chrX:26755113-26754773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 134
               

               Conread position:
               5-348
               

               Cow position:
               chrX:29864915-29864573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 0
               

               Conread position:
               5-348
               

               Cow position:
               chrX:30455106-30454763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-348
               

               Cow position:
               chrX:32094935-32094591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               5-348
               

               Cow position:
               chrX:38151204-38151547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-348
               

               Cow position:
               chrX:42733382-42733724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               5-349
               

               Cow position:
               chrX:11949977-11949633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-349
               

               Cow position:
               chrX:21226990-21227333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 171
               

               Conread position:
               5-349
               

               Cow position:
               chrX:40121487-40121155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 98
               

               Conread position:
               5-349
               

               Cow position:
               chrX:41103304-41103648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-356
               

               Cow position:
               chrX:1331452-1331801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 68
               

               Conread position:
               5-356
               

               Cow position:
               chrX:11819880-11820225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 49
               

               Conread position:
               5-362
               

               Cow position:
               chrX:30180410-30180053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-362
               

               Cow position:
               chrX:48310869-48310493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               261
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               135, 191
               

               Conread position:
               5-367
               

               Cow position:
               chrX:9898824-9898463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 86
               

               Conread position:
               5-369
               

               Cow position:
               chrX:2160281-2160645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 130
               

               Conread position:
               5-370
               

               Cow position:
               chrX:2417967-2417603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 62
               

               Conread position:
               5-370
               

               Cow position:
               chrX:7486380-7486745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 230
               

               Conread position:
               5-370
               

               Cow position:
               chrX:7755417-7755782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-370
               

               Cow position:
               chrX:17783015-17783380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 131
               

               Conread position:
               5-371
               

               Cow position:
               chrX:23121899-23122267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 213
               

               Conread position:
               5-372
               

               Cow position:
               chrX:37403507-37403139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 131
               

               Conread position:
               5-373
               

               Cow position:
               chrX:25459122-25458753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 298
               

               Conread position:
               5-373
               

               Cow position:
               chrX:27590517-27590156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 0
               

               Conread position:
               5-373
               

               Cow position:
               chrX:31202356-31202724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-373
               

               Cow position:
               chrX:41847018-41846650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               310, 275
               

               Conread position:
               5-374
               

               Cow position:
               chrX:22538438-22538069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-374
               

               Cow position:
               chrX:27498283-27498653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 295
               

               Conread position:
               5-374
               

               Cow position:
               chrX:29849115-29848746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-381
               

               Cow position:
               chrX:5353787-5353411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 294
               

               Conread position:
               5-381
               

               Cow position:
               chrX:5375881-5376261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               5-381
               

               Cow position:
               chrX:29915709-29915334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 222
               

               Conread position:
               5-381
               

               Cow position:
               chrX:30823032-30823408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 238
               

               Conread position:
               5-381
               

               Cow position:
               chrX:35240380-35240756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-386
               

               Cow position:
               chrX:18898135-18897759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 0
               

               Conread position:
               5-459
               

               Cow position:
               chrX:21785285-21785735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               383, 62
               

               Conread position:
               5-459
               

               Cow position:
               chrX:40545106-40544636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               5-467
               

               Cow position:
               chrX:6493248-6493710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               369, 252
               

               Conread position:
               5-467
               

               Cow position:
               chrX:14162707-14163174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 294
               

               Conread position:
               5-467
               

               Cow position:
               chrX:18078395-18077927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               5-467
               

               Cow position:
               chrX:22493523-22493990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               391, 0
               

               Conread position:
               5-467
               

               Cow position:
               chrX:27977315-27976848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               5-470
               

               Cow position:
               chrX:26531475-26531944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 97
               

               Conread position:
               5-474
               

               Cow position:
               chrX:27095635-27096100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 294
               

               Conread position:
               5-480
               

               Cow position:
               chrX:27443045-27442563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 239
               

               Conread position:
               5-483
               

               Cow position:
               chrX:41879414-41878938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               385, 204
               

               Conread position:
               5-490
               

               Cow position:
               chrX:15007635-15007148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 297
               

               Conread position:
               5-494
               

               Cow position:
               chrX:23396122-23396607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               383, 275
               

               Conread position:
               5-512
               

               Cow position:
               chrX:34532047-34532545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               514
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               391, 300
               

               Conread position:
               6-134
               

               Cow position:
               chrX:40542185-40542311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               6-135
               

               Cow position:
               chrX:42010551-42010678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               6-152
               

               Cow position:
               chrX:39730623-39730477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               140, 130
               

               Conread position:
               6-159
               

               Cow position:
               chrX:44802966-44803111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               6-225
               

               Cow position:
               chrX:9635736-9635516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               6-232
               

               Cow position:
               chrX:44568508-44568737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               174
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               42, 208
               

               Conread position:
               6-245
               

               Cow position:
               chrX:19127732-19127471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               94, 233
               

               Conread position:
               6-246
               

               Cow position:
               chrX:2185747-2185984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               128, 53
               

               Conread position:
               6-247
               

               Cow position:
               chrX:33589651-33589897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 105
               

               Conread position:
               6-267
               

               Cow position:
               chrX:43980262-43980529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               129, 220
               

               Conread position:
               6-275
               

               Cow position:
               chrX:158316-158048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               200
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               128, 16
               

               Conread position:
               6-284
               

               Cow position:
               chrX:30531513-30531237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 121
               

               Conread position:
               6-286
               

               Cow position:
               chrX:30163722-30163441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               6-287
               

               Cow position:
               chrX:28632960-28632682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               6-288
               

               Cow position:
               chrX:24482853-24482572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               6-310
               

               Cow position:
               chrX:26787842-26788148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               83, 15
               

               Conread position:
               6-329
               

               Cow position:
               chrX:24788193-24787881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               6-341
               

               Cow position:
               chrX:23218592-23218930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               95, 32
               

               Conread position:
               6-343
               

               Cow position:
               chrX:27485920-27486262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 234
               

               Conread position:
               6-346
               

               Cow position:
               chrX:17082892-17082550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               125, 31
               

               Conread position:
               6-347
               

               Cow position:
               chrX:45786647-45786986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               286, 0
               

               Conread position:
               6-348
               

               Cow position:
               chrX:16853872-16853530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-348
               

               Cow position:
               chrX:36513979-36514311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 188
               

               Conread position:
               6-349
               

               Cow position:
               chrX:39698844-39699187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 136
               

               Conread position:
               6-370
               

               Cow position:
               chrX:9128573-9128937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 130
               

               Conread position:
               6-372
               

               Cow position:
               chrX:32182519-32182144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               47, 72
               

               Conread position:
               6-374
               

               Cow position:
               chrX:3569968-3570334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               352, 0
               

               Conread position:
               6-381
               

               Cow position:
               chrX:24587937-24587562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-381
               

               Cow position:
               chrX:30143767-30143393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 0
               

               Conread position:
               6-525
               

               Cow position:
               chrX:30133791-30133287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               529
               

               Alignm identity:
               336
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               304, 152
               

               Conread position:
               7-225
               

               Cow position:
               chrX:41754232-41754456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               118, 137
               

               Conread position:
               7-247
               

               Cow position:
               chrX:24174436-24174191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               66, 124
               

               Conread position:
               7-255
               

               Cow position:
               chrX:13785865-13785613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 245
               

               Conread position:
               7-255
               

               Cow position:
               chrX:29875488-29875229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               118, 240
               

               Conread position:
               7-272
               

               Cow position:
               chrX:18247862-18248122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               81, 128
               

               Conread position:
               7-274
               

               Cow position:
               chrX:14974220-14973947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               84, 233
               

               Conread position:
               7-283
               

               Cow position:
               chrX:5069971-5069691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               136, 77
               

               Conread position:
               7-284
               

               Cow position:
               chrX:8434686-8434412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 127
               

               Conread position:
               7-288
               

               Cow position:
               chrX:42294619-42294906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               119, 142
               

               Conread position:
               7-290
               

               Cow position:
               chrX:45200374-45200086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               209
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               117, 72
               

               Conread position:
               7-319
               

               Cow position:
               chrX:33172450-33172128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               226
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               119, 21
               

               Conread position:
               7-324
               

               Cow position:
               chrX:31728976-31729291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 0
               

               Conread position:
               7-346
               

               Cow position:
               chrX:1978011-1978366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               134, 35
               

               Conread position:
               7-346
               

               Cow position:
               chrX:16078187-16078523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 79
               

               Conread position:
               7-347
               

               Cow position:
               chrX:19595784-19596131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               239
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               115, 21
               

               Conread position:
               7-450
               

               Cow position:
               chrX:45373765-45373329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               386, 161
               

               Conread position:
               7-467
               

               Cow position:
               chrX:20878244-20877780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               8-123
               

               Cow position:
               chrX:36900972-36900859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               8-167
               

               Cow position:
               chrX:6235138-6234979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-169
               

               Cow position:
               chrX:45464965-45465124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               8-233
               

               Cow position:
               chrX:38705080-38705312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               109, 209
               

               Conread position:
               8-248
               

               Cow position:
               chrX:36975363-36975600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 0
               

               Conread position:
               8-253
               

               Cow position:
               chrX:38999415-38999661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               126, 204
               

               Conread position:
               8-255
               

               Cow position:
               chrX:13889355-13889603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               113, 54
               

               Conread position:
               8-259
               

               Cow position:
               chrX:34543283-34543533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               8-269
               

               Cow position:
               chrX:31385236-31385495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               66, 238
               

               Conread position:
               8-283
               

               Cow position:
               chrX:15574367-15574093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               135, 109
               

               Conread position:
               8-284
               

               Cow position:
               chrX:17522698-17522416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               132, 36
               

               Conread position:
               8-285
               

               Cow position:
               chrX:11588139-11587857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               117, 87
               

               Conread position:
               8-287
               

               Cow position:
               chrX:39316587-39316315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               118, 41
               

               Conread position:
               8-288
               

               Cow position:
               chrX:9235177-9235456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               115, 14
               

               Conread position:
               8-288
               

               Cow position:
               chrX:17892062-17892342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 131
               

               Conread position:
               8-289
               

               Cow position:
               chrX:14267687-14267399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               49, 234
               

               Conread position:
               8-346
               

               Cow position:
               chrX:389025-389362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               35, 42
               

               Conread position:
               8-346
               

               Cow position:
               chrX:11904803-11904468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               146, 77
               

               Conread position:
               8-346
               

               Cow position:
               chrX:14853647-14853301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               115, 40
               

               Conread position:
               8-348
               

               Cow position:
               chrX:4325972-4325638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               241
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               120, 59
               

               Conread position:
               8-348
               

               Cow position:
               chrX:26626176-26625818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               248
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               8-374
               

               Cow position:
               chrX:27105777-27106143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 289
               

               Conread position:
               8-388
               

               Cow position:
               chrX:15596571-15596936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               258
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               8-432
               

               Cow position:
               chrX:18551425-18551849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               138, 128
               

               Conread position:
               9-207
               

               Cow position:
               chrX:37118422-37118623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               133, 42
               

               Conread position:
               9-221
               

               Cow position:
               chrX:18712052-18712270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               9-228
               

               Cow position:
               chrX:18988981-18989205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               122, 58
               

               Conread position:
               10-213
               

               Cow position:
               chrX:8518593-8518799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               47, 58
               

               Conread position:
               10-233
               

               Cow position:
               chrX:32430858-32431075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               10-248
               

               Cow position:
               chrX:42381908-42381669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 99
               

               Conread position:
               10-255
               

               Cow position:
               chrX:15038289-15038035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               179, 0
               

               Conread position:
               10-285
               

               Cow position:
               chrX:30085731-30085462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               251, 108
               

               Conread position:
               10-324
               

               Cow position:
               chrX:21319213-21319524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               114, 192
               

               Conread position:
               10-370
               

               Cow position:
               chrX:29760220-29760580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 126
               

               Conread position:
               10-384
               

               Cow position:
               chrX:42585541-42585180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               112, 43
               

               Conread position:
               10-388
               

               Cow position:
               chrX:20652919-20653294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               258
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               145, 104
               

               Conread position:
               10-496
               

               Cow position:
               chrX:34441926-34441443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               383, 225
               

               Conread position:
               11-254
               

               Cow position:
               chrX:5934694-5934948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               73, 124
               

               Conread position:
               11-255
               

               Cow position:
               chrX:22590762-22591010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               55, 46
               

               Conread position:
               11-255
               

               Cow position:
               chrX:37066792-37067040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               113, 205
               

               Conread position:
               11-270
               

               Cow position:
               chrX:18152735-18152477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               115, 10
               

               Conread position:
               11-284
               

               Cow position:
               chrX:41114719-41114999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               115, 144
               

               Conread position:
               11-287
               

               Cow position:
               chrX:487489-487767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               136, 95
               

               Conread position:
               11-287
               

               Cow position:
               chrX:19464839-19464566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               114, 17
               

               Conread position:
               11-288
               

               Cow position:
               chrX:16713719-16713996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 67
               

               Conread position:
               11-288
               

               Cow position:
               chrX:18769420-18769699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               75, 45
               

               Conread position:
               11-325
               

               Cow position:
               chrX:18459940-18459622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               49, 57
               

               Conread position:
               11-345
               

               Cow position:
               chrX:12437713-12437384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               11-346
               

               Cow position:
               chrX:15308481-15308142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               46, 55
               

               Conread position:
               11-346
               

               Cow position:
               chrX:17969334-17968992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               65, 277
               

               Conread position:
               11-346
               

               Cow position:
               chrX:23932709-23932382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               279, 126
               

               Conread position:
               11-346
               

               Cow position:
               chrX:24193639-24193967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               241
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               136, 37
               

               Conread position:
               11-346
               

               Cow position:
               chrX:27240254-27240595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               235
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               121, 66
               

               Conread position:
               11-346
               

               Cow position:
               chrX:28666453-28666113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               116, 65
               

               Conread position:
               11-348
               

               Cow position:
               chrX:18695403-18695061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 60
               

               Conread position:
               11-348
               

               Cow position:
               chrX:18950218-18949886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 103
               

               Conread position:
               11-348
               

               Cow position:
               chrX:44086826-44087164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 0
               

               Conread position:
               12-225
               

               Cow position:
               chrX:46698553-46698335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               68, 87
               

               Conread position:
               12-288
               

               Cow position:
               chrX:36219059-36219328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               13-170
               

               Cow position:
               chrX:40450111-40449948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               13-252
               

               Cow position:
               chrX:17265527-17265283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 35
               

               Conread position:
               13-288
               

               Cow position:
               chrX:31342722-31342985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               13-290
               

               Cow position:
               chrX:48287907-48287639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               13-346
               

               Cow position:
               chrX:30152072-30151738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               119, 44
               

               Conread position:
               13-348
               

               Cow position:
               chrX:17794517-17794844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 224
               

               Conread position:
               14-224
               

               Cow position:
               chrX:33799423-33799629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               14-255
               

               Cow position:
               chrX:24309594-24309357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               14-288
               

               Cow position:
               chrX:16706324-16706601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 65
               

               Conread position:
               14-288
               

               Cow position:
               chrX:23819699-23819426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               107, 47
               

               Conread position:
               14-343
               

               Cow position:
               chrX:47379950-47379613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 293
               

               Conread position:
               14-346
               

               Cow position:
               chrX:5127454-5127774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               118, 53
               

               Conread position:
               14-346
               

               Cow position:
               chrX:18896902-18896563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               61, 241
               

               Conread position:
               14-346
               

               Cow position:
               chrX:35832935-35833266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               77, 28
               

               Conread position:
               14-348
               

               Cow position:
               chrX:13868230-13868552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 50
               

               Conread position:
               15-284
               

               Cow position:
               chrX:48243925-48243657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 56
               

               Conread position:
               15-381
               

               Cow position:
               chrX:21833410-21833777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 285
               

               Conread position:
               16-219
               

               Cow position:
               chrX:729345-729134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               114, 51
               

               Conread position:
               16-289
               

               Cow position:
               chrX:21415604-21415888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               16-346
               

               Cow position:
               chrX:41306107-41305776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 262
               

               Conread position:
               17-268
               

               Cow position:
               chrX:24260086-24259833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               5, 224
               

               Conread position:
               17-491
               

               Cow position:
               chrX:27516065-27516531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 11
               

               Conread position:
               18-287
               

               Cow position:
               chrX:38067184-38066915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-370
               

               Cow position:
               chrX:15718148-15717800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 0
               

               Conread position:
               19-346
               

               Cow position:
               chrX:165418-165748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               107, 29
               

               Conread position:
               19-370
               

               Cow position:
               chrX:28058264-28057914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 48
               

               Conread position:
               20-184
               

               Cow position:
               chrX:21794465-21794624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               20-213
               

               Cow position:
               chrX:16049240-16049437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               118, 80
               

               Conread position:
               20-242
               

               Cow position:
               chrX:22623983-22624209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               20-259
               

               Cow position:
               chrX:19228550-19228302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               20-288
               

               Cow position:
               chrX:13460378-13460107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               105, 43
               

               Conread position:
               20-332
               

               Cow position:
               chrX:47654835-47655143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 280
               

               Conread position:
               20-345
               

               Cow position:
               chrX:1394143-1394470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               106, 47
               

               Conread position:
               20-525
               

               Cow position:
               chrX:47873802-47873305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               517
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 118
               

               Conread position:
               21-228
               

               Cow position:
               chrX:5648866-5648656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               30, 97
               

               Conread position:
               21-288
               

               Cow position:
               chrX:15232101-15231829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 141
               

               Conread position:
               21-288
               

               Cow position:
               chrX:15591134-15591403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               101, 72
               

               Conread position:
               21-346
               

               Cow position:
               chrX:25302203-25301896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               187, 46
               

               Conread position:
               22-268
               

               Cow position:
               chrX:32128461-32128215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-270
               

               Cow position:
               chrX:29876523-29876276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               102, 216
               

               Conread position:
               22-332
               

               Cow position:
               chrX:47965466-47965143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               232
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               17, 86
               

               Conread position:
               23-294
               

               Cow position:
               chrX:19622842-19623120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               102, 242
               

               Conread position:
               23-322
               

               Cow position:
               chrX:30162544-30162829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               217
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               24-253
               

               Cow position:
               chrX:27679886-27680125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               94, 142
               

               Conread position:
               24-290
               

               Cow position:
               chrX:10920435-10920167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               24-346
               

               Cow position:
               chrX:39288640-39288311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               62, 294
               

               Conread position:
               25-201
               

               Cow position:
               chrX:23451919-23451745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               26-195
               

               Cow position:
               chrX:42281934-42282110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               26-240
               

               Cow position:
               chrX:23696886-23696664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               6, 181
               

               Conread position:
               26-288
               

               Cow position:
               chrX:40180334-40180072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 218
               

               Conread position:
               27-255
               

               Cow position:
               chrX:25163331-25163559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               105, 166
               

               Conread position:
               27-259
               

               Cow position:
               chrX:42757188-42757427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               27-344
               

               Cow position:
               chrX:5676162-5675846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               112, 50
               

               Conread position:
               27-346
               

               Cow position:
               chrX:3807931-3808265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               27-346
               

               Cow position:
               chrX:24169782-24169458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               95, 137
               

               Conread position:
               27-346
               

               Cow position:
               chrX:40322451-40322773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               99, 72
               

               Conread position:
               27-483
               

               Cow position:
               chrX:917839-917371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 273
               

               Conread position:
               29-250
               

               Cow position:
               chrX:20675639-20675861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               29-289
               

               Cow position:
               chrX:11377109-11377373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               103, 185
               

               Conread position:
               29-334
               

               Cow position:
               chrX:27019745-27020047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 149
               

               Conread position:
               29-370
               

               Cow position:
               chrX:1781445-1781786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 107
               

               Conread position:
               29-370
               

               Cow position:
               chrX:7311533-7311874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 107
               

               Conread position:
               29-370
               

               Cow position:
               chrX:11663718-11664059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 107
               

               Conread position:
               29-370
               

               Cow position:
               chrX:18118929-18118591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               29-370
               

               Cow position:
               chrX:30981628-30981284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 90
               

               Conread position:
               29-370
               

               Cow position:
               chrX:34285524-34285182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 107
               

               Conread position:
               29-370
               

               Cow position:
               chrX:34413316-34413657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 107
               

               Conread position:
               30-389
               

               Cow position:
               chrX:45501685-45502048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               31-232
               

               Cow position:
               chrX:39952800-39952594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               29, 22
               

               Conread position:
               32-285
               

               Cow position:
               chrX:42530363-42530115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               32-290
               

               Cow position:
               chrX:13922985-13923229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               249, 45
               

               Conread position:
               32-370
               

               Cow position:
               chrX:27626898-27627236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 104
               

               Conread position:
               32-370
               

               Cow position:
               chrX:28555892-28555554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               33-284
               

               Cow position:
               chrX:42728489-42728745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               6, 252
               

               Conread position:
               33-297
               

               Cow position:
               chrX:47989307-47989564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               33-388
               

               Cow position:
               chrX:24200739-24201081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               96, 86
               

               Conread position:
               34-370
               

               Cow position:
               chrX:6652526-6652191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               35-215
               

               Cow position:
               chrX:9072760-9072945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               91, 32
               

               Conread position:
               35-278
               

               Cow position:
               chrX:35633208-35632965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               99, 56
               

               Conread position:
               35-291
               

               Cow position:
               chrX:16222172-16222427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               35-477
               

               Cow position:
               chrX:23299501-23299946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 107
               

               Conread position:
               36-288
               

               Cow position:
               chrX:24288366-24288117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               36-288
               

               Cow position:
               chrX:43800500-43800249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               99, 83
               

               Conread position:
               36-369
               

               Cow position:
               chrX:7444631-7444963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 100
               

               Conread position:
               37-262
               

               Cow position:
               chrX:45566156-45566381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               37-346
               

               Cow position:
               chrX:7108461-7108774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               84, 220
               

               Conread position:
               37-346
               

               Cow position:
               chrX:34435484-34435193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               37-489
               

               Cow position:
               chrX:8899573-8900027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 98
               

               Conread position:
               38-474
               

               Cow position:
               chrX:23564248-23563805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 104
               

               Conread position:
               38-480
               

               Cow position:
               chrX:28133897-28134337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 198
               

               Conread position:
               38-582
               

               Cow position:
               chrX:10438103-10437579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               553
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 203
               

               Conread position:
               39-210
               

               Cow position:
               chrX:13122648-13122823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               89, 105
               

               Conread position:
               42-192
               

               Cow position:
               chrX:20709586-20709741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               82, 25
               

               Conread position:
               42-259
               

               Cow position:
               chrX:27070314-27070098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               94, 34
               

               Conread position:
               42-259
               

               Cow position:
               chrX:41884882-41884666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               206, 7
               

               Conread position:
               42-271
               

               Cow position:
               chrX:35678770-35679005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               15, 20
               

               Conread position:
               42-344
               

               Cow position:
               chrX:19210842-19210541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               83, 25
               

               Conread position:
               42-346
               

               Cow position:
               chrX:13686271-13686572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 14
               

               Conread position:
               42-348
               

               Cow position:
               chrX:2945317-2945009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               42-348
               

               Cow position:
               chrX:11672334-11672640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 94
               

               Conread position:
               42-349
               

               Cow position:
               chrX:26229951-26229650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 94
               

               Conread position:
               42-383
               

               Cow position:
               chrX:19022980-19023330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               198, 150
               

               Conread position:
               42-477
               

               Cow position:
               chrX:38094972-38094533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 250
               

               Conread position:
               43-324
               

               Cow position:
               chrX:27318770-27319051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 98
               

               Conread position:
               43-346
               

               Cow position:
               chrX:16530474-16530783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 211
               

               Conread position:
               43-480
               

               Cow position:
               chrX:21666037-21665603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               267, 181
               

               Conread position:
               44-255
               

               Cow position:
               chrX:1729020-1728801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               75, 33
               

               Conread position:
               44-284
               

               Cow position:
               chrX:36692794-36693030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               122, 90
               

               Conread position:
               44-346
               

               Cow position:
               chrX:29010286-29010589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               84, 37
               

               Conread position:
               44-346
               

               Cow position:
               chrX:37575865-37576173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               44-483
               

               Cow position:
               chrX:38936247-38936691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 23
               

               Conread position:
               45-370
               

               Cow position:
               chrX:7742901-7742576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 91
               

               Conread position:
               45-490
               

               Cow position:
               chrX:37231967-37232414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 191
               

               Conread position:
               45-494
               

               Cow position:
               chrX:4044302-4043855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 255
               

               Conread position:
               46-356
               

               Cow position:
               chrX:48247285-48246970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               39, 173
               

               Conread position:
               48-254
               

               Cow position:
               chrX:3130125-3130329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               48-446
               

               Cow position:
               chrX:45967720-45968114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 306
               

               Conread position:
               49-247
               

               Cow position:
               chrX:40035909-40035713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               52-228
               

               Cow position:
               chrX:40475278-40475102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               52-259
               

               Cow position:
               chrX:16416031-16416244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               89, 23
               

               Conread position:
               52-288
               

               Cow position:
               chrX:42222005-42221769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               52-346
               

               Cow position:
               chrX:19320148-19320445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               76, 25
               

               Conread position:
               52-348
               

               Cow position:
               chrX:1947158-1946862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               52-348
               

               Cow position:
               chrX:5017841-5017549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               238, 31
               

               Conread position:
               52-348
               

               Cow position:
               chrX:28847319-28847020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 189
               

               Conread position:
               52-366
               

               Cow position:
               chrX:160476-160158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               229
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               52-374
               

               Cow position:
               chrX:6655704-6655382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 107
               

               Conread position:
               52-388
               

               Cow position:
               chrX:40515468-40515789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               95, 44
               

               Conread position:
               53-210
               

               Cow position:
               chrX:30729938-30729775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               53-322
               

               Cow position:
               chrX:12096682-12096415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 105
               

               Conread position:
               53-346
               

               Cow position:
               chrX:8703413-8703119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               73, 54
               

               Conread position:
               53-369
               

               Cow position:
               chrX:23139877-23140190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 83
               

               Conread position:
               53-370
               

               Cow position:
               chrX:13384971-13385288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 83
               

               Conread position:
               53-370
               

               Cow position:
               chrX:13396687-13396371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 35
               

               Conread position:
               53-370
               

               Cow position:
               chrX:13447834-13448151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 83
               

               Conread position:
               53-370
               

               Cow position:
               chrX:24809406-24809090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 0
               

               Conread position:
               55-373
               

               Cow position:
               chrX:47607979-47608298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 82
               

               Conread position:
               56-225
               

               Cow position:
               chrX:43049689-43049855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               56-370
               

               Cow position:
               chrX:17980162-17980476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 80
               

               Conread position:
               57-288
               

               Cow position:
               chrX:11975919-11975688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               57-324
               

               Cow position:
               chrX:15486057-15485792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 178
               

               Conread position:
               58-284
               

               Cow position:
               chrX:43198998-43199230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               21, 62
               

               Conread position:
               58-370
               

               Cow position:
               chrX:20321198-20320887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 78
               

               Conread position:
               58-370
               

               Cow position:
               chrX:46579286-46578974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 78
               

               Conread position:
               58-477
               

               Cow position:
               chrX:26441211-26440789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 244
               

               Conread position:
               59-233
               

               Cow position:
               chrX:12756366-12756191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 8
               

               Conread position:
               59-252
               

               Cow position:
               chrX:31338509-31338707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               69, 122
               

               Conread position:
               59-346
               

               Cow position:
               chrX:41377181-41377464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               226, 63
               

               Conread position:
               59-355
               

               Cow position:
               chrX:8926284-8926584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               66, 155
               

               Conread position:
               59-391
               

               Cow position:
               chrX:36840431-36840774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               71, 233
               

               Conread position:
               62-259
               

               Cow position:
               chrX:16284407-16284205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               83, 198
               

               Conread position:
               62-285
               

               Cow position:
               chrX:25966622-25966852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               61, 189
               

               Conread position:
               62-288
               

               Cow position:
               chrX:6566-6801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               64, 103
               

               Conread position:
               62-346
               

               Cow position:
               chrX:28765970-28765694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               45, 51
               

               Conread position:
               63-345
               

               Cow position:
               chrX:37544516-37544803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               66, 185
               

               Conread position:
               64-232
               

               Cow position:
               chrX:41682930-41683104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               64-267
               

               Cow position:
               chrX:25568804-25568599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               64-356
               

               Cow position:
               chrX:24886913-24886634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               65-324
               

               Cow position:
               chrX:39556239-39555982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 28
               

               Conread position:
               65-374
               

               Cow position:
               chrX:24102556-24102864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 20
               

               Conread position:
               67-191
               

               Cow position:
               chrX:11590044-11589921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               67-241
               

               Cow position:
               chrX:45448234-45448408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               67-244
               

               Cow position:
               chrX:19019517-19019337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               146
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               67-259
               

               Cow position:
               chrX:20167731-20167924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               155
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               67-264
               

               Cow position:
               chrX:44206863-44207054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               67-280
               

               Cow position:
               chrX:43730613-43730401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               21, 53
               

               Conread position:
               67-283
               

               Cow position:
               chrX:30134910-30134692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               164
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               187, 0
               

               Conread position:
               67-284
               

               Cow position:
               chrX:47219677-47219460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               67-325
               

               Cow position:
               chrX:6906244-6905979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               72, 48
               

               Conread position:
               67-346
               

               Cow position:
               chrX:6654739-6654445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               72, 156
               

               Conread position:
               67-346
               

               Cow position:
               chrX:20710768-20711045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               55, 75
               

               Conread position:
               67-348
               

               Cow position:
               chrX:23047358-23047639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 69
               

               Conread position:
               67-349
               

               Cow position:
               chrX:10916326-10916613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 249
               

               Conread position:
               67-356
               

               Cow position:
               chrX:12810692-12810989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               20, 13
               

               Conread position:
               67-370
               

               Cow position:
               chrX:3079009-3078707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 69
               

               Conread position:
               67-370
               

               Cow position:
               chrX:19674226-19674529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 69
               

               Conread position:
               67-372
               

               Cow position:
               chrX:21626382-21626068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               60, 237
               

               Conread position:
               67-388
               

               Cow position:
               chrX:48370673-48370995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 309
               

               Conread position:
               67-459
               

               Cow position:
               chrX:38967229-38967615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 158
               

               Conread position:
               67-491
               

               Cow position:
               chrX:42171721-42171293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 171
               

               Conread position:
               67-496
               

               Cow position:
               chrX:14599114-14599541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 116
               

               Conread position:
               68-228
               

               Cow position:
               chrX:16689110-16689270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               23, 30
               

               Conread position:
               68-269
               

               Cow position:
               chrX:19842303-19842106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               68-370
               

               Cow position:
               chrX:14134760-14135062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 68
               

               Conread position:
               68-370
               

               Cow position:
               chrX:19495381-19495079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 68
               

               Conread position:
               69-256
               

               Cow position:
               chrX:32419770-32419953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               154
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               94, 8
               

               Conread position:
               69-306
               

               Cow position:
               chrX:22284088-22284333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               59, 240
               

               Conread position:
               69-370
               

               Cow position:
               chrX:40581566-40581871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               223
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               10, 25
               

               Conread position:
               69-483
               

               Cow position:
               chrX:1616477-1616050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 170
               

               Conread position:
               70-288
               

               Cow position:
               chrX:19772038-19771829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               53, 167
               

               Conread position:
               70-346
               

               Cow position:
               chrX:23034471-23034753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               61, 195
               

               Conread position:
               70-370
               

               Cow position:
               chrX:38442543-38442843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 66
               

               Conread position:
               72-319
               

               Cow position:
               chrX:15341449-15341208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               146, 42
               

               Conread position:
               72-369
               

               Cow position:
               chrX:2362082-2362379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 64
               

               Conread position:
               73-233
               

               Cow position:
               chrX:28878671-28878510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               116, 63
               

               Conread position:
               73-254
               

               Cow position:
               chrX:36351458-36351639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-324
               

               Cow position:
               chrX:11581521-11581769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               73-343
               

               Cow position:
               chrX:19540771-19540494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               40, 239
               

               Conread position:
               73-389
               

               Cow position:
               chrX:14262252-14261926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               52, 99
               

               Conread position:
               74-255
               

               Cow position:
               chrX:34663275-34663093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               74-366
               

               Cow position:
               chrX:44737406-44737114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               14, 10
               

               Conread position:
               74-495
               

               Cow position:
               chrX:48248404-48248830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               280
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               67, 231
               

               Conread position:
               75-288
               

               Cow position:
               chrX:38827055-38826840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               76-191
               

               Cow position:
               chrX:4963656-4963541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               70, 60
               

               Conread position:
               76-256
               

               Cow position:
               chrX:6277874-6277689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               49, 92
               

               Conread position:
               76-288
               

               Cow position:
               chrX:36373130-36373343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               77-288
               

               Cow position:
               chrX:5856929-5856713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               52, 20
               

               Conread position:
               77-288
               

               Cow position:
               chrX:38577120-38577331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 181
               

               Conread position:
               77-291
               

               Cow position:
               chrX:34006901-34007115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 59
               

               Conread position:
               77-324
               

               Cow position:
               chrX:28097719-28097959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               29, 61
               

               Conread position:
               77-348
               

               Cow position:
               chrX:21495346-21495617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               77-370
               

               Cow position:
               chrX:32010619-32010912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               77-502
               

               Cow position:
               chrX:47211264-47210835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 224
               

               Conread position:
               78-207
               

               Cow position:
               chrX:48021002-48020872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               78-249
               

               Cow position:
               chrX:14050395-14050566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               68, 58
               

               Conread position:
               78-370
               

               Cow position:
               chrX:10992207-10992499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 58
               

               Conread position:
               79-199
               

               Cow position:
               chrX:42242883-42242764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               79-256
               

               Cow position:
               chrX:4943417-4943237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               79-288
               

               Cow position:
               chrX:42142043-42141830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               47, 162
               

               Conread position:
               79-330
               

               Cow position:
               chrX:48224598-48224345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 218
               

               Conread position:
               79-343
               

               Cow position:
               chrX:17282405-17282135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               43, 236
               

               Conread position:
               79-348
               

               Cow position:
               chrX:20888054-20887787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 60
               

               Conread position:
               79-348
               

               Cow position:
               chrX:40106101-40105832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               15, 212
               

               Conread position:
               79-496
               

               Cow position:
               chrX:8796841-8797261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 120
               

               Conread position:
               80-381
               

               Cow position:
               chrX:25946249-25945945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               225
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               100, 18
               

               Conread position:
               80-459
               

               Cow position:
               chrX:15147591-15147220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 63
               

               Conread position:
               81-285
               

               Cow position:
               chrX:16529597-16529801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               81-324
               

               Cow position:
               chrX:39174621-39174379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 0
               

               Conread position:
               81-346
               

               Cow position:
               chrX:34376546-34376812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               198
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               99, 70
               

               Conread position:
               81-366
               

               Cow position:
               chrX:2499747-2499463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               81-370
               

               Cow position:
               chrX:828472-828772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               215
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               65, 55
               

               Conread position:
               81-373
               

               Cow position:
               chrX:45467628-45467335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 55
               

               Conread position:
               83-231
               

               Cow position:
               chrX:4177651-4177798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               83-254
               

               Cow position:
               chrX:7341398-7341573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               42, 23
               

               Conread position:
               83-349
               

               Cow position:
               chrX:25452144-25452407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               83-370
               

               Cow position:
               chrX:15504885-15505172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 53
               

               Conread position:
               84-218
               

               Cow position:
               chrX:14901390-14901251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               84-289
               

               Cow position:
               chrX:23484777-23484992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               44, 199
               

               Conread position:
               84-374
               

               Cow position:
               chrX:23583153-23583443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 218
               

               Conread position:
               84-501
               

               Cow position:
               chrX:42587834-42587414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               226, 215
               

               Conread position:
               85-247
               

               Cow position:
               chrX:41083499-41083663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               85-291
               

               Cow position:
               chrX:15590276-15590070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               86-369
               

               Cow position:
               chrX:12776389-12776106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               86-370
               

               Cow position:
               chrX:44557676-44557960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               60, 50
               

               Conread position:
               86-500
               

               Cow position:
               chrX:6413643-6414057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               264
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               316, 239
               

               Conread position:
               87-259
               

               Cow position:
               chrX:33519177-33519349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               87-324
               

               Cow position:
               chrX:29723049-29723285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 0
               

               Conread position:
               87-348
               

               Cow position:
               chrX:5455102-5454851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               87-370
               

               Cow position:
               chrX:30543689-30543410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               38, 19
               

               Conread position:
               87-459
               

               Cow position:
               chrX:45674442-45674815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               60, 119
               

               Conread position:
               87-492
               

               Cow position:
               chrX:7054134-7053728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 55
               

               Conread position:
               87-496
               

               Cow position:
               chrX:10831914-10831485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 0
               

               Conread position:
               92-233
               

               Cow position:
               chrX:44839785-44839926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-233
               

               Cow position:
               chrX:48221319-48221178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-259
               

               Cow position:
               chrX:37205316-37205486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               53, 146
               

               Conread position:
               92-262
               

               Cow position:
               chrX:17010699-17010529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               54, 44
               

               Conread position:
               92-273
               

               Cow position:
               chrX:17933730-17933916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 127
               

               Conread position:
               92-335
               

               Cow position:
               chrX:21749855-21749612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 98
               

               Conread position:
               92-346
               

               Cow position:
               chrX:36678070-36677813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               40, 139
               

               Conread position:
               92-347
               

               Cow position:
               chrX:126388-126650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               36, 211
               

               Conread position:
               92-348
               

               Cow position:
               chrX:19196915-19196659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 44
               

               Conread position:
               92-348
               

               Cow position:
               chrX:21063900-21064143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               218, 47
               

               Conread position:
               92-348
               

               Cow position:
               chrX:44907919-44908181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               169, 118
               

               Conread position:
               92-348
               

               Cow position:
               chrX:46448231-46447969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               56, 140
               

               Conread position:
               92-370
               

               Cow position:
               chrX:9593532-9593254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-370
               

               Cow position:
               chrX:10495836-10496114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 44
               

               Conread position:
               92-370
               

               Cow position:
               chrX:14409784-14409506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 43
               

               Conread position:
               92-370
               

               Cow position:
               chrX:31450017-31449741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               92-383
               

               Cow position:
               chrX:37299196-37299490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               49, 21
               

               Conread position:
               92-387
               

               Cow position:
               chrX:37377656-37377368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               199, 49
               

               Conread position:
               92-459
               

               Cow position:
               chrX:23024306-23024673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 166
               

               Conread position:
               93-290
               

               Cow position:
               chrX:21795099-21795297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               15, 50
               

               Conread position:
               95-259
               

               Cow position:
               chrX:46721184-46721014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               95-267
               

               Cow position:
               chrX:12671881-12671709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               140
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               95-288
               

               Cow position:
               chrX:22821020-22821213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               162
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               95-345
               

               Cow position:
               chrX:13363879-13363622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               27, 186
               

               Conread position:
               95-345
               

               Cow position:
               chrX:19847382-19847127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               31, 151
               

               Conread position:
               95-348
               

               Cow position:
               chrX:40602570-40602821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 0
               

               Conread position:
               95-370
               

               Cow position:
               chrX:5112950-5112675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 41
               

               Conread position:
               95-370
               

               Cow position:
               chrX:15561209-15560933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 41
               

               Conread position:
               95-373
               

               Cow position:
               chrX:20617191-20616913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 41
               

               Conread position:
               95-373
               

               Cow position:
               chrX:24125456-24125188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               195, 79
               

               Conread position:
               95-466
               

               Cow position:
               chrX:32584205-32583831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 44
               

               Conread position:
               96-348
               

               Cow position:
               chrX:25741507-25741255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 40
               

               Conread position:
               96-379
               

               Cow position:
               chrX:32978650-32978367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 204
               

               Conread position:
               96-501
               

               Cow position:
               chrX:32309701-32310116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               270
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               35, 213
               

               Conread position:
               97-346
               

               Cow position:
               chrX:22325680-22325933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               34, 77
               

               Conread position:
               97-356
               

               Cow position:
               chrX:42508035-42507780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               213, 18
               

               Conread position:
               98-260
               

               Cow position:
               chrX:27288139-27287970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               98-495
               

               Cow position:
               chrX:34401607-34402006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               269
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               232, 112
               

               Conread position:
               98-497
               

               Cow position:
               chrX:42247566-42247178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               361, 36
               

               Conread position:
               99-207
               

               Cow position:
               chrX:2962519-2962411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               86
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-249
               

               Cow position:
               chrX:45599289-45599139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               39, 25
               

               Conread position:
               99-492
               

               Cow position:
               chrX:38218328-38218708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               360, 136
               

               Conread position:
               100-370
               

               Cow position:
               chrX:5739602-5739332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               46, 36
               

               Conread position:
               100-370
               

               Cow position:
               chrX:21062828-21063097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               100-388
               

               Cow position:
               chrX:25419553-25419263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               16, 148
               

               Conread position:
               101-217
               

               Cow position:
               chrX:10399607-10399723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               45, 35
               

               Conread position:
               101-346
               

               Cow position:
               chrX:2300537-2300790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               101-370
               

               Cow position:
               chrX:43979230-43979499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 35
               

               Conread position:
               102-288
               

               Cow position:
               chrX:32188746-32188560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               102-348
               

               Cow position:
               chrX:34095174-34095420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 34
               

               Conread position:
               103-386
               

               Cow position:
               chrX:23235444-23235727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 33
               

               Conread position:
               104-288
               

               Cow position:
               chrX:34192296-34192476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               104-370
               

               Cow position:
               chrX:37497832-37497566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               191
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               42, 32
               

               Conread position:
               105-348
               

               Cow position:
               chrX:16722201-16721943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               44, 209
               

               Conread position:
               106-245
               

               Cow position:
               chrX:41198703-41198842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               106-329
               

               Cow position:
               chrX:31373195-31373413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               204, 112
               

               Conread position:
               106-370
               

               Cow position:
               chrX:47386314-47386051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               42, 30
               

               Conread position:
               106-489
               

               Cow position:
               chrX:7718469-7718854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               261
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               39, 130
               

               Conread position:
               107-288
               

               Cow position:
               chrX:40648283-40648462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               150
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               9, 129
               

               Conread position:
               107-373
               

               Cow position:
               chrX:44851709-44851978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               39, 29
               

               Conread position:
               109-322
               

               Cow position:
               chrX:7178528-7178740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               24, 130
               

               Conread position:
               109-348
               

               Cow position:
               chrX:7509757-7509996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               37, 27
               

               Conread position:
               110-247
               

               Cow position:
               chrX:45228438-45228303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               110-387
               

               Cow position:
               chrX:25035765-25035490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               200, 124
               

               Conread position:
               111-348
               

               Cow position:
               chrX:17691883-17692119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               179
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               179, 51
               

               Conread position:
               111-459
               

               Cow position:
               chrX:33855618-33855266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               139, 93
               

               Conread position:
               111-477
               

               Cow position:
               chrX:41743535-41743900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               282, 181
               

               Conread position:
               112-288
               

               Cow position:
               chrX:19290395-19290571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               112-489
               

               Cow position:
               chrX:16289939-16289557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               249
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               178, 187
               

               Conread position:
               113-233
               

               Cow position:
               chrX:6262806-6262687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               113-282
               

               Cow position:
               chrX:5292267-5292094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               113-347
               

               Cow position:
               chrX:22578536-22578306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               113-348
               

               Cow position:
               chrX:9096291-9096525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               167, 0
               

               Conread position:
               114-450
               

               Cow position:
               chrX:45399875-45399533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               9, 187
               

               Conread position:
               115-252
               

               Cow position:
               chrX:11412161-11412025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               115-324
               

               Cow position:
               chrX:12179594-12179802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               115-349
               

               Cow position:
               chrX:11844612-11844383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 120
               

               Conread position:
               115-377
               

               Cow position:
               chrX:30141699-30141437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               175, 184
               

               Conread position:
               115-501
               

               Cow position:
               chrX:11718152-11717776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               262
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               195, 49
               

               Conread position:
               116-324
               

               Cow position:
               chrX:47343919-47344129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               85, 185
               

               Conread position:
               116-348
               

               Cow position:
               chrX:27616465-27616693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               116-378
               

               Cow position:
               chrX:28105553-28105809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               194, 93
               

               Conread position:
               116-388
               

               Cow position:
               chrX:17271663-17271390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               19, 44
               

               Conread position:
               116-474
               

               Cow position:
               chrX:20697977-20697622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               9, 120
               

               Conread position:
               119-233
               

               Cow position:
               chrX:16542076-16541962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-256
               

               Cow position:
               chrX:41167398-41167262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               128, 17
               

               Conread position:
               119-259
               

               Cow position:
               chrX:46044650-46044788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               119-282
               

               Cow position:
               chrX:5118853-5118692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               94, 117
               

               Conread position:
               119-348
               

               Cow position:
               chrX:47362256-47362027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               188, 174
               

               Conread position:
               119-496
               

               Cow position:
               chrX:31250022-31250393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 71
               

               Conread position:
               120-241
               

               Cow position:
               chrX:40184004-40183882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               120-291
               

               Cow position:
               chrX:48205286-48205111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               120-370
               

               Cow position:
               chrX:10718141-10718390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               120-370
               

               Cow position:
               chrX:30950159-30950409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               122-253
               

               Cow position:
               chrX:5640986-5640855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               122-282
               

               Cow position:
               chrX:48490251-48490094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               122-288
               

               Cow position:
               chrX:11583510-11583347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               122-370
               

               Cow position:
               chrX:30863566-30863318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               123-330
               

               Cow position:
               chrX:11806383-11806176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               6, 82
               

               Conread position:
               124-233
               

               Cow position:
               chrX:22866885-22866776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               124-284
               

               Cow position:
               chrX:38225719-38225878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               125-225
               

               Cow position:
               chrX:39071319-39071419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               125-248
               

               Cow position:
               chrX:41673511-41673634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               32, 118
               

               Conread position:
               125-269
               

               Cow position:
               chrX:1823698-1823842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               125-291
               

               Cow position:
               chrX:39386629-39386464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               139
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               125-348
               

               Cow position:
               chrX:44980401-44980178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               125-370
               

               Cow position:
               chrX:6828771-6829017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               125-370
               

               Cow position:
               chrX:15578005-15577760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               125-370
               

               Cow position:
               chrX:29508419-29508658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               125-370
               

               Cow position:
               chrX:30538516-30538271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               125-370
               

               Cow position:
               chrX:30899752-30899506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               125-370
               

               Cow position:
               chrX:36240031-36240276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               125-370
               

               Cow position:
               chrX:36479568-36479813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               125-370
               

               Cow position:
               chrX:39548966-39549211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               125-370
               

               Cow position:
               chrX:48165159-48165404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               125-370
               

               Cow position:
               chrX:48328751-48328506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               23, 11
               

               Conread position:
               125-373
               

               Cow position:
               chrX:27982509-27982262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               125-483
               

               Cow position:
               chrX:34502559-34502916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               246
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               185, 110
               

               Conread position:
               126-291
               

               Cow position:
               chrX:10348200-10348032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               6, 27
               

               Conread position:
               126-346
               

               Cow position:
               chrX:11981757-11981987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               16, 177
               

               Conread position:
               126-348
               

               Cow position:
               chrX:25283503-25283287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               126-370
               

               Cow position:
               chrX:43767899-43767656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               127-322
               

               Cow position:
               chrX:11614359-11614554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               183, 172
               

               Conread position:
               127-322
               

               Cow position:
               chrX:11917024-11917215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               64, 71
               

               Conread position:
               127-346
               

               Cow position:
               chrX:25848553-25848773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               122, 172
               

               Conread position:
               127-374
               

               Cow position:
               chrX:6659013-6659257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               128-288
               

               Cow position:
               chrX:40321266-40321428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               128-288
               

               Cow position:
               chrX:45932644-45932803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               128-346
               

               Cow position:
               chrX:15304682-15304468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               162, 40
               

               Conread position:
               129-347
               

               Cow position:
               chrX:7381964-7382181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               181, 77
               

               Conread position:
               129-348
               

               Cow position:
               chrX:29877541-29877322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               129-370
               

               Cow position:
               chrX:39731153-39731394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               129-370
               

               Cow position:
               chrX:45263428-45263188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               130-370
               

               Cow position:
               chrX:35612903-35612664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               130-460
               

               Cow position:
               chrX:14009012-14008680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               16, 6
               

               Conread position:
               130-468
               

               Cow position:
               chrX:37843361-37843700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               242
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               160, 165
               

               Conread position:
               131-349
               

               Cow position:
               chrX:20029889-20030114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 6
               

               Conread position:
               133-324
               

               Cow position:
               chrX:45089081-45089277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               119, 172
               

               Conread position:
               133-525
               

               Cow position:
               chrX:47967244-47967638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               157, 117
               

               Conread position:
               136-346
               

               Cow position:
               chrX:30784510-30784721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 101
               

               Conread position:
               137-290
               

               Cow position:
               chrX:47177947-47177793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               116, 98
               

               Conread position:
               138-256
               

               Cow position:
               chrX:42492881-42492763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               138-288
               

               Cow position:
               chrX:26754136-26753986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               138-370
               

               Cow position:
               chrX:22567181-22567413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               142-272
               

               Cow position:
               chrX:23091459-23091586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               142-480
               

               Cow position:
               chrX:41403614-41403970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               142-480
               

               Cow position:
               chrX:41410162-41410518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               143-248
               

               Cow position:
               chrX:22821667-22821772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               143-256
               

               Cow position:
               chrX:47715432-47715545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               143-259
               

               Cow position:
               chrX:10394297-10394413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               143-278
               

               Cow position:
               chrX:18455797-18455933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               123, 114
               

               Conread position:
               143-284
               

               Cow position:
               chrX:38667980-38667838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               143-287
               

               Cow position:
               chrX:44983635-44983491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               143-288
               

               Cow position:
               chrX:20945222-20945367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               143-328
               

               Cow position:
               chrX:32171228-32171043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               147, 154
               

               Conread position:
               143-332
               

               Cow position:
               chrX:45945287-45945473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               159, 92
               

               Conread position:
               143-345
               

               Cow position:
               chrX:22873051-22873254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               143-346
               

               Cow position:
               chrX:25232240-25232447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               100, 156
               

               Conread position:
               143-348
               

               Cow position:
               chrX:29048687-29048885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               143-366
               

               Cow position:
               chrX:46771318-46771093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               156, 137
               

               Conread position:
               143-370
               

               Cow position:
               chrX:35803466-35803695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               143-370
               

               Cow position:
               chrX:44096207-44096434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               164, 150
               

               Conread position:
               143-373
               

               Cow position:
               chrX:21255691-21255920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               168, 155
               

               Conread position:
               143-374
               

               Cow position:
               chrX:32747312-32747545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               166, 0
               

               Conread position:
               143-391
               

               Cow position:
               chrX:9227330-9227080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               113, 142
               

               Conread position:
               143-479
               

               Cow position:
               chrX:31436134-31436466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               138, 217
               

               Conread position:
               144-255
               

               Cow position:
               chrX:9417098-9416987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               144-284
               

               Cow position:
               chrX:18999553-18999692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               144-288
               

               Cow position:
               chrX:45851586-45851731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               144-348
               

               Cow position:
               chrX:21844289-21844496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               144-370
               

               Cow position:
               chrX:24577910-24577684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-288
               

               Cow position:
               chrX:20954260-20954404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               145-348
               

               Cow position:
               chrX:34333544-34333341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               145, 154
               

               Conread position:
               145-348
               

               Cow position:
               chrX:36820576-36820373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-348
               

               Cow position:
               chrX:37079883-37079680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-348
               

               Cow position:
               chrX:39954882-39954679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-356
               

               Cow position:
               chrX:31839165-31839376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               145, 164
               

               Conread position:
               145-369
               

               Cow position:
               chrX:44387646-44387865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               148, 90
               

               Conread position:
               145-370
               

               Cow position:
               chrX:11725611-11725382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               145-370
               

               Cow position:
               chrX:11860586-11860361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-370
               

               Cow position:
               chrX:14846418-14846193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-370
               

               Cow position:
               chrX:20038562-20038338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               219, 0
               

               Conread position:
               145-370
               

               Cow position:
               chrX:24758041-24757816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-491
               

               Cow position:
               chrX:47481456-47481804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               116, 56
               

               Conread position:
               146-370
               

               Cow position:
               chrX:23215764-23215988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               146-496
               

               Cow position:
               chrX:31443163-31442824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               164, 62
               

               Conread position:
               147-288
               

               Cow position:
               chrX:48310082-48309944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               148-288
               

               Cow position:
               chrX:30686937-30686797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               148-374
               

               Cow position:
               chrX:26492660-26492887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               16, 145
               

               Conread position:
               148-460
               

               Cow position:
               chrX:36778064-36778380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               148-476
               

               Cow position:
               chrX:7645917-7646240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               151, 140
               

               Conread position:
               149-259
               

               Cow position:
               chrX:1514766-1514656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               149-346
               

               Cow position:
               chrX:23876459-23876261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               48, 161
               

               Conread position:
               149-346
               

               Cow position:
               chrX:29024109-29024303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               141, 153
               

               Conread position:
               149-348
               

               Cow position:
               chrX:24966929-24967128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               150-288
               

               Cow position:
               chrX:43114833-43114970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               38, 108
               

               Conread position:
               150-459
               

               Cow position:
               chrX:2425461-2425150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               233, 0
               

               Conread position:
               150-480
               

               Cow position:
               chrX:14924662-14924992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               232
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               246, 7
               

               Conread position:
               151-388
               

               Cow position:
               chrX:43527164-43527398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 146
               

               Conread position:
               151-490
               

               Cow position:
               chrX:40558014-40557678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               159, 148
               

               Conread position:
               152-288
               

               Cow position:
               chrX:34006479-34006342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               152-370
               

               Cow position:
               chrX:13196308-13196090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               152-388
               

               Cow position:
               chrX:42855073-42855307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               11, 85
               

               Conread position:
               153-370
               

               Cow position:
               chrX:2812745-2812531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               153-370
               

               Cow position:
               chrX:23452934-23452717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               154-327
               

               Cow position:
               chrX:12021939-12022112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               136, 151
               

               Conread position:
               155-255
               

               Cow position:
               chrX:6487666-6487766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               155-388
               

               Cow position:
               chrX:38007102-38006869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               158, 147
               

               Conread position:
               157-291
               

               Cow position:
               chrX:30337227-30337362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               158-288
               

               Cow position:
               chrX:10306342-10306469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               158-379
               

               Cow position:
               chrX:45421004-45420783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               99, 11
               

               Conread position:
               159-288
               

               Cow position:
               chrX:19291792-19291917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               159-343
               

               Cow position:
               chrX:34454344-34454523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               151, 35
               

               Conread position:
               159-346
               

               Cow position:
               chrX:8103423-8103236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               131, 139
               

               Conread position:
               159-370
               

               Cow position:
               chrX:29083795-29084001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               159-371
               

               Cow position:
               chrX:30060861-30060649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               159-459
               

               Cow position:
               chrX:5638498-5638201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               151, 73
               

               Conread position:
               160-284
               

               Cow position:
               chrX:16783165-16783289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               160-370
               

               Cow position:
               chrX:29844805-29844595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               161-324
               

               Cow position:
               chrX:32214799-32214636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               161-346
               

               Cow position:
               chrX:21217915-21217737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               161-370
               

               Cow position:
               chrX:12850804-12851013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               162-344
               

               Cow position:
               chrX:23080966-23081144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               162-349
               

               Cow position:
               chrX:33205319-33205132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               151, 140
               

               Conread position:
               163-370
               

               Cow position:
               chrX:15008758-15008551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               163-370
               

               Cow position:
               chrX:29356261-29356468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               163-477
               

               Cow position:
               chrX:15545571-15545880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               147, 123
               

               Conread position:
               164-370
               

               Cow position:
               chrX:36364893-36365100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               9, 91
               

               Conread position:
               164-373
               

               Cow position:
               chrX:27458930-27459140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               117, 148
               

               Conread position:
               167-274
               

               Cow position:
               chrX:36311277-36311384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               167-346
               

               Cow position:
               chrX:9161266-9161444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               137, 113
               

               Conread position:
               167-370
               

               Cow position:
               chrX:27469976-27469773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               168-291
               

               Cow position:
               chrX:14018806-14018928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               168-370
               

               Cow position:
               chrX:42779446-42779245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               170-324
               

               Cow position:
               chrX:28157168-28157320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               170-369
               

               Cow position:
               chrX:3658373-3658174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               171-356
               

               Cow position:
               chrX:33639650-33639838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               78, 35
               

               Conread position:
               171-384
               

               Cow position:
               chrX:12826429-12826642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               113, 122
               

               Conread position:
               172-348
               

               Cow position:
               chrX:616720-616547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               138, 63
               

               Conread position:
               172-370
               

               Cow position:
               chrX:39667510-39667312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               173-349
               

               Cow position:
               chrX:28845528-28845705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               77, 121
               

               Conread position:
               174-370
               

               Cow position:
               chrX:14152530-14152334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               174-370
               

               Cow position:
               chrX:43101212-43101408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               175-370
               

               Cow position:
               chrX:42165761-42165956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               115, 126
               

               Conread position:
               175-480
               

               Cow position:
               chrX:19188622-19188929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               218, 200
               

               Conread position:
               176-370
               

               Cow position:
               chrX:3895289-3895095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               176-370
               

               Cow position:
               chrX:4404222-4404416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               177-483
               

               Cow position:
               chrX:7350990-7351295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               216, 58
               

               Conread position:
               178-290
               

               Cow position:
               chrX:170260-170148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               178-370
               

               Cow position:
               chrX:12032660-12032852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               180-322
               

               Cow position:
               chrX:23061145-23061286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               130, 112
               

               Conread position:
               180-368
               

               Cow position:
               chrX:30021407-30021219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               180-388
               

               Cow position:
               chrX:25618227-25618013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               181-370
               

               Cow position:
               chrX:6038230-6038041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               182-370
               

               Cow position:
               chrX:21011629-21011440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               59, 55
               

               Conread position:
               184-289
               

               Cow position:
               chrX:45414605-45414500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               189-348
               

               Cow position:
               chrX:33020186-33020344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               121, 103
               

               Conread position:
               190-348
               

               Cow position:
               chrX:18194614-18194772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               190-348
               

               Cow position:
               chrX:23451470-23451312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               190-374
               

               Cow position:
               chrX:23264736-23264552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               191-387
               

               Cow position:
               chrX:39347084-39346888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               129, 101
               

               Conread position:
               191-519
               

               Cow position:
               chrX:19015144-19015462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               119, 108
               

               Conread position:
               194-348
               

               Cow position:
               chrX:35497791-35497945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               194-370
               

               Cow position:
               chrX:41886090-41885914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               196-388
               

               Cow position:
               chrX:4269360-4269172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               113, 35
               

               Conread position:
               197-500
               

               Cow position:
               chrX:25237886-25238181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               113, 66
               

               Conread position:
               199-370
               

               Cow position:
               chrX:24903794-24903965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               203-370
               

               Cow position:
               chrX:16808042-16807874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               203-373
               

               Cow position:
               chrX:46033004-46032838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               203-522
               

               Cow position:
               chrX:46723027-46722706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               190, 274
               

               Conread position:
               206-370
               

               Cow position:
               chrX:10293445-10293281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               206-497
               

               Cow position:
               chrX:2467597-2467889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               187, 48
               

               Conread position:
               208-370
               

               Cow position:
               chrX:1749790-1749628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               208-492
               

               Cow position:
               chrX:42874697-42874987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               102, 72
               

               Conread position:
               209-522
               

               Cow position:
               chrX:8730799-8731122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               104, 94
               

               Conread position:
               211-373
               

               Cow position:
               chrX:23703043-23702881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 23
               
Show alignments to all cow chromosomes.
Conread position:	1-113
Cow position:	chrX:20789234-20789124 (view UCSC Genome Browser custom track)
Alignm length:	113
Alignm identity:	90
Alignm E-value:	8e-21
Alignm gaps (pig, cow):	66, 0
Conread position:	1-131
Cow position:	chrX:488048-488180 (view UCSC Genome Browser custom track)
Alignm length:	133
Alignm identity:	108
Alignm E-value:	6e-29
Alignm gaps (pig, cow):	64, 0
Conread position:	1-172
Cow position:	chrX:2648849-2648673 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	128
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	132, 27
Conread position:	1-233
Cow position:	chrX:16733238-16733002 (view UCSC Genome Browser custom track)
Alignm length:	239
Alignm identity:	169
Alignm E-value:	9e-32
Alignm gaps (pig, cow):	135, 66
Conread position:	1-248
Cow position:	chrX:8517116-8517367 (view UCSC Genome Browser custom track)
Alignm length:	254
Alignm identity:	197
Alignm E-value:	0
Alignm gaps (pig, cow):	133, 66
Conread position:	1-252
Cow position:	chrX:25404845-25404592 (view UCSC Genome Browser custom track)
Alignm length:	261
Alignm identity:	192
Alignm E-value:	6e-39
Alignm gaps (pig, cow):	130, 66
Conread position:	1-253
Cow position:	chrX:2146826-2147080 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	186
Alignm E-value:	5e-37
Alignm gaps (pig, cow):	133, 58
Conread position:	1-255
Cow position:	chrX:12980835-12980581 (view UCSC Genome Browser custom track)
Alignm length:	255
Alignm identity:	198
Alignm E-value:	0
Alignm gaps (pig, cow):	0, 0
Conread position:	1-288
Cow position:	chrX:42540111-42540402 (view UCSC Genome Browser custom track)
Alignm length:	293
Alignm identity:	200
Alignm E-value:	2e-37
Alignm gaps (pig, cow):	126, 267
Conread position:	1-346
Cow position:	chrX:19742000-19741647 (view UCSC Genome Browser custom track)
Alignm length:	358
Alignm identity:	237
Alignm E-value:	3e-33
Alignm gaps (pig, cow):	61, 315
Conread position:	1-356
Cow position:	chrX:28111007-28111373 (view UCSC Genome Browser custom track)
Alignm length:	370
Alignm identity:	253
Alignm E-value:	9.94922e-44
Alignm gaps (pig, cow):	140, 50
Conread position:	1-391
Cow position:	chrX:33827537-33827120 (view UCSC Genome Browser custom track)
Alignm length:	420
Alignm identity:	276
Alignm E-value:	1e-33
Alignm gaps (pig, cow):	67, 175
Conread position:	1-496
Cow position:	chrX:151415-151910 (view UCSC Genome Browser custom track)
Alignm length:	507
Alignm identity:	342
Alignm E-value:	0
Alignm gaps (pig, cow):	141, 111
Conread position:	2-110
Cow position:	chrX:25361075-25361182 (view UCSC Genome Browser custom track)
Alignm length:	109
Alignm identity:	90
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	10, 0
Conread position:	2-117
Cow position:	chrX:40365231-40365116 (view UCSC Genome Browser custom track)
Alignm length:	116
Alignm identity:	92
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	0, 0
Conread position:	2-121
Cow position:	chrX:21625466-21625348 (view UCSC Genome Browser custom track)
Alignm length:	120
Alignm identity:	94
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	65, 0
Conread position:	2-122
Cow position:	chrX:20544592-20544472 (view UCSC Genome Browser custom track)
Alignm length:	121
Alignm identity:	97
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	0, 0
Conread position:	2-123
Cow position:	chrX:18455270-18455148 (view UCSC Genome Browser custom track)
Alignm length:	123
Alignm identity:	96
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	47, 0
Conread position:	2-129
Cow position:	chrX:4768229-4768354 (view UCSC Genome Browser custom track)
Alignm length:	128
Alignm identity:	98
Alignm E-value:	9e-22
Alignm gaps (pig, cow):	114, 0
Conread position:	2-130
Cow position:	chrX:4794995-4794867 (view UCSC Genome Browser custom track)
Alignm length:	129
Alignm identity:	101
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	0, 0