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Cow genome map

           
Conread name:
           
Ss1.1-Mixc-0025o19.5
        

               
Conread position:
               
10-473
               

               
Cow position:
               
chr11:39462374-39462828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 150
               

               
Conread position:
               
14-302
               

               
Cow position:
               
chr11:2811962-2811690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
244, 18
               

               
Conread position:
               
18-425
               

               
Cow position:
               
chr11:81406395-81406006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
19, 63
               

               
Conread position:
               
19-213
               

               
Cow position:
               
chr11:18372843-18373033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
22, 13
               

               
Conread position:
               
24-200
               

               
Cow position:
               
chr11:37100591-37100410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
14, 58
               

               
Conread position:
               
26-373
               

               
Cow position:
               
chr11:70838533-70838179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
9, 68
               

               
Conread position:
               
26-412
               

               
Cow position:
               
chr11:2925518-2925160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
52, 135
               

               
Conread position:
               
27-353
               

               
Cow position:
               
chr11:69810677-69810994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
50, 124
               

               
Conread position:
               
29-355
               

               
Cow position:
               
chr11:67246581-67246878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
218, 22
               

               
Conread position:
               
29-425
               

               
Cow position:
               
chr11:46746408-46746797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
29-432
               

               
Cow position:
               
chr11:65762821-65762416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 46
               

               
Conread position:
               
29-462
               

               
Cow position:
               
chr11:61202938-61203366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
48, 119
               

               
Conread position:
               
31-195
               

               
Cow position:
               
chr11:44818872-44819042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
31-362
               

               
Cow position:
               
chr11:18588803-18588486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 89
               

               
Conread position:
               
34-167
               

               
Cow position:
               
chr11:22103535-22103668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 45
               

               
Conread position:
               
34-244
               

               
Cow position:
               
chr11:40486155-40485948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
5, 50
               

               
Conread position:
               
35-175
               

               
Cow position:
               
chr11:70709773-70709633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
35-256
               

               
Cow position:
               
chr11:59156090-59155885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
35-366
               

               
Cow position:
               
chr11:36799517-36799204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
90, 42
               

               
Conread position:
               
35-432
               

               
Cow position:
               
chr11:49152735-49153108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
35-450
               

               
Cow position:
               
chr11:259397-258991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
36-185
               

               
Cow position:
               
chr11:86926137-86925997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
93, 33
               

               
Conread position:
               
36-202
               

               
Cow position:
               
chr11:65495545-65495379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
36-211
               

               
Cow position:
               
chr11:21819662-21819489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
123, 42
               

               
Conread position:
               
36-314
               

               
Cow position:
               
chr11:45898273-45897998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
41, 169
               

               
Conread position:
               
36-356
               

               
Cow position:
               
chr11:22499569-22499273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 83
               

               
Conread position:
               
36-372
               

               
Cow position:
               
chr11:23232731-23232410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
41, 56
               

               
Conread position:
               
36-417
               

               
Cow position:
               
chr11:81162649-81162294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
36-420
               

               
Cow position:
               
chr11:13499797-13500171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
36-421
               

               
Cow position:
               
chr11:19592216-19591836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 176
               

               
Conread position:
               
36-422
               

               
Cow position:
               
chr11:48672484-48672872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
41, 171
               

               
Conread position:
               
36-451
               

               
Cow position:
               
chr11:40818856-40818445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 41
               

               
Conread position:
               
36-460
               

               
Cow position:
               
chr11:7458501-7458087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
37-201
               

               
Cow position:
               
chr11:67951179-67951019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 103
               

               
Conread position:
               
38-142
               

               
Cow position:
               
chr11:64405552-64405447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
38-155
               

               
Cow position:
               
chr11:16795368-16795252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 69
               

               
Conread position:
               
38-172
               

               
Cow position:
               
chr11:55117257-55117397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 133
               

               
Conread position:
               
38-180
               

               
Cow position:
               
chr11:37118269-37118414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-189
               

               
Cow position:
               
chr11:38638905-38639053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 59
               

               
Conread position:
               
38-191
               

               
Cow position:
               
chr11:25336859-25337012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
39, 89
               

               
Conread position:
               
38-191
               

               
Cow position:
               
chr11:35238613-35238770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-191
               

               
Cow position:
               
chr11:41239490-41239335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-191
               

               
Cow position:
               
chr11:41438440-41438284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
38-192
               

               
Cow position:
               
chr11:81138010-81138160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-193
               

               
Cow position:
               
chr11:3769504-3769352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 56
               

               
Conread position:
               
38-195
               

               
Cow position:
               
chr11:41426698-41426852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
88, 39
               

               
Conread position:
               
38-195
               

               
Cow position:
               
chr11:71309744-71309588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
38-196
               

               
Cow position:
               
chr11:25165228-25165383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-197
               

               
Cow position:
               
chr11:64904780-64904939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
39, 31
               

               
Conread position:
               
38-198
               

               
Cow position:
               
chr11:35363279-35363441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-198
               

               
Cow position:
               
chr11:38193936-38194097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
38-199
               

               
Cow position:
               
chr11:10388810-10388654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
86, 39
               

               
Conread position:
               
38-199
               

               
Cow position:
               
chr11:35276085-35276245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
39, 81
               

               
Conread position:
               
38-199
               

               
Cow position:
               
chr11:47586561-47586405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
38-200
               

               
Cow position:
               
chr11:4384409-4384566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
38-200
               

               
Cow position:
               
chr11:17321442-17321604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 145
               

               
Conread position:
               
38-200
               

               
Cow position:
               
chr11:49105842-49106002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
86, 39
               

               
Conread position:
               
38-201
               

               
Cow position:
               
chr11:61246673-61246513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
84, 26
               

               
Conread position:
               
38-201
               

               
Cow position:
               
chr11:81174674-81174836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
81, 40
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr11:2514808-2514648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
40, 100
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr11:17192497-17192335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
113, 39
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr11:30866923-30867087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr11:30879464-30879624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 125
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr11:40860932-40860762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr11:41577224-41577067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr11:44642501-44642342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr11:51144502-51144666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr11:63518799-63518959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr11:73478405-73478566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
105, 39
               

               
Conread position:
               
38-206
               

               
Cow position:
               
chr11:32609776-32609953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
38-207
               

               
Cow position:
               
chr11:51044152-51043979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
38-208
               

               
Cow position:
               
chr11:84924314-84924142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 136
               

               
Conread position:
               
38-211
               

               
Cow position:
               
chr11:48901293-48901125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
38-211
               

               
Cow position:
               
chr11:85764736-85764893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
38-212
               

               
Cow position:
               
chr11:9837312-9837142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
38-212
               

               
Cow position:
               
chr11:77241158-77241327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
48, 61
               

               
Conread position:
               
38-213
               

               
Cow position:
               
chr11:1485576-1485400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 161
               

               
Conread position:
               
38-213
               

               
Cow position:
               
chr11:17112842-17112675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
38-213
               

               
Cow position:
               
chr11:18210564-18210388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-213
               

               
Cow position:
               
chr11:30475783-30475960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 137
               

               
Conread position:
               
38-213
               

               
Cow position:
               
chr11:48932799-48932627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-213
               

               
Cow position:
               
chr11:62979262-62979445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
39, 175
               

               
Conread position:
               
38-213
               

               
Cow position:
               
chr11:80530155-80530326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
38-214
               

               
Cow position:
               
chr11:77207833-77208005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-216
               

               
Cow position:
               
chr11:75748219-75748394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
81, 38
               

               
Conread position:
               
38-217
               

               
Cow position:
               
chr11:8105567-8105744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
87, 39
               

               
Conread position:
               
38-217
               

               
Cow position:
               
chr11:58588129-58588307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 129
               

               
Conread position:
               
38-217
               

               
Cow position:
               
chr11:62965769-62965587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
43, 54
               

               
Conread position:
               
38-217
               

               
Cow position:
               
chr11:81614848-81614679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
38-222
               

               
Cow position:
               
chr11:63520557-63520740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
38-226
               

               
Cow position:
               
chr11:12555636-12555442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
85, 163
               

               
Conread position:
               
38-230
               

               
Cow position:
               
chr11:34412881-34413072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 40
               

               
Conread position:
               
38-239
               

               
Cow position:
               
chr11:31885305-31885502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
96, 39
               

               
Conread position:
               
38-250
               

               
Cow position:
               
chr11:25319835-25320042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
38-256
               

               
Cow position:
               
chr11:16251464-16251252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
199, 166
               

               
Conread position:
               
38-256
               

               
Cow position:
               
chr11:21830568-21830356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
38-256
               

               
Cow position:
               
chr11:42793191-42792981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
40, 165
               

               
Conread position:
               
38-257
               

               
Cow position:
               
chr11:65857642-65857853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 39
               

               
Conread position:
               
38-267
               

               
Cow position:
               
chr11:81066797-81066575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
38-275
               

               
Cow position:
               
chr11:17968791-17968571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
185, 39
               

               
Conread position:
               
38-303
               

               
Cow position:
               
chr11:22932185-22931930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
38-308
               

               
Cow position:
               
chr11:16910582-16910313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 179
               

               
Conread position:
               
38-311
               

               
Cow position:
               
chr11:42003172-42002899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 177
               

               
Conread position:
               
38-311
               

               
Cow position:
               
chr11:64638739-64638477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
38-313
               

               
Cow position:
               
chr11:56728731-56729000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 82
               

               
Conread position:
               
38-319
               

               
Cow position:
               
chr11:50951335-50951613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
39, 213
               

               
Conread position:
               
38-319
               

               
Cow position:
               
chr11:62880841-62880575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
81, 42
               

               
Conread position:
               
38-319
               

               
Cow position:
               
chr11:71168793-71168533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
243, 31
               

               
Conread position:
               
38-320
               

               
Cow position:
               
chr11:32377972-32378245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 38
               

               
Conread position:
               
38-322
               

               
Cow position:
               
chr11:61859115-61858843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 94
               

               
Conread position:
               
38-325
               

               
Cow position:
               
chr11:77766817-77766532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 50
               

               
Conread position:
               
38-328
               

               
Cow position:
               
chr11:80788126-80787841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
90, 39
               

               
Conread position:
               
38-345
               

               
Cow position:
               
chr11:30120877-30120580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
292, 39
               

               
Conread position:
               
38-346
               

               
Cow position:
               
chr11:56654331-56654639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
38-349
               

               
Cow position:
               
chr11:31352788-31352465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
40, 218
               

               
Conread position:
               
38-350
               

               
Cow position:
               
chr11:3833563-3833276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
38-350
               

               
Cow position:
               
chr11:34829995-34829698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
8, 40
               

               
Conread position:
               
38-350
               

               
Cow position:
               
chr11:63469667-63469963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
220, 41
               

               
Conread position:
               
38-353
               

               
Cow position:
               
chr11:35874201-35873912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
246, 28
               

               
Conread position:
               
38-354
               

               
Cow position:
               
chr11:36986746-36987041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
39, 112
               

               
Conread position:
               
38-356
               

               
Cow position:
               
chr11:41271923-41272231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
39, 103
               

               
Conread position:
               
38-360
               

               
Cow position:
               
chr11:23128755-23128442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
202, 48
               

               
Conread position:
               
38-361
               

               
Cow position:
               
chr11:63482641-63482332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
38-362
               

               
Cow position:
               
chr11:17660879-17661183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
38-362
               

               
Cow position:
               
chr11:42358909-42359219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
235, 39
               

               
Conread position:
               
38-363
               

               
Cow position:
               
chr11:1362696-1362367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 171
               

               
Conread position:
               
38-363
               

               
Cow position:
               
chr11:34032413-34032098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
92, 30
               

               
Conread position:
               
38-363
               

               
Cow position:
               
chr11:36659028-36658723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
38-363
               

               
Cow position:
               
chr11:76114440-76114743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
231, 40
               

               
Conread position:
               
38-366
               

               
Cow position:
               
chr11:17495961-17495638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
38-366
               

               
Cow position:
               
chr11:33310756-33311081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
38-367
               

               
Cow position:
               
chr11:18572588-18572904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
39, 55
               

               
Conread position:
               
38-367
               

               
Cow position:
               
chr11:42083264-42083574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
38-369
               

               
Cow position:
               
chr11:3233865-3234182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 132
               

               
Conread position:
               
38-372
               

               
Cow position:
               
chr11:377864-377533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 164
               

               
Conread position:
               
38-372
               

               
Cow position:
               
chr11:44234139-44234465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
220, 39
               

               
Conread position:
               
38-373
               

               
Cow position:
               
chr11:30924937-30925265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 38
               

               
Conread position:
               
38-373
               

               
Cow position:
               
chr11:67747066-67747390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
40, 193
               

               
Conread position:
               
38-373
               

               
Cow position:
               
chr11:83230603-83230290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
232, 28
               

               
Conread position:
               
38-375
               

               
Cow position:
               
chr11:29947142-29946800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 39
               

               
Conread position:
               
38-376
               

               
Cow position:
               
chr11:7589975-7590302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
39, 107
               

               
Conread position:
               
38-378
               

               
Cow position:
               
chr11:62155411-62155752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 21
               

               
Conread position:
               
38-380
               

               
Cow position:
               
chr11:1071307-1070973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
60, 40
               

               
Conread position:
               
38-381
               

               
Cow position:
               
chr11:2092125-2092446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
38-381
               

               
Cow position:
               
chr11:17831443-17831102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
40, 97
               

               
Conread position:
               
38-381
               

               
Cow position:
               
chr11:28643866-28644206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
38-381
               

               
Cow position:
               
chr11:35684713-35684383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
40, 159
               

               
Conread position:
               
38-381
               

               
Cow position:
               
chr11:36238566-36238897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
38-381
               

               
Cow position:
               
chr11:42044206-42043876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
37, 109
               

               
Conread position:
               
38-381
               

               
Cow position:
               
chr11:63847634-63847963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
39, 61
               

               
Conread position:
               
38-381
               

               
Cow position:
               
chr11:70609572-70609917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
38-384
               

               
Cow position:
               
chr11:54334119-54334450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
38-393
               

               
Cow position:
               
chr11:56518528-56518181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
39, 168
               

               
Conread position:
               
38-394
               

               
Cow position:
               
chr11:79728889-79728535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
37, 161
               

               
Conread position:
               
38-395
               

               
Cow position:
               
chr11:6835313-6835666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
39, 82
               

               
Conread position:
               
38-398
               

               
Cow position:
               
chr11:7924805-7924458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
40, 115
               

               
Conread position:
               
38-398
               

               
Cow position:
               
chr11:38236028-38236387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
38-400
               

               
Cow position:
               
chr11:59872710-59873059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
32, 173
               

               
Conread position:
               
38-402
               

               
Cow position:
               
chr11:32436113-32436476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 115
               

               
Conread position:
               
38-405
               

               
Cow position:
               
chr11:18244157-18243804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
40, 151
               

               
Conread position:
               
38-405
               

               
Cow position:
               
chr11:30934209-30934558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
92, 39
               

               
Conread position:
               
38-409
               

               
Cow position:
               
chr11:4663254-4662909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-409
               

               
Cow position:
               
chr11:36112202-36112563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
38, 100
               

               
Conread position:
               
38-409
               

               
Cow position:
               
chr11:59902672-59903037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 167
               

               
Conread position:
               
38-409
               

               
Cow position:
               
chr11:67804533-67804890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
38, 154
               

               
Conread position:
               
38-409
               

               
Cow position:
               
chr11:82940833-82940481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 20
               

               
Conread position:
               
38-412
               

               
Cow position:
               
chr11:41549550-41549185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
132, 38
               

               
Conread position:
               
38-413
               

               
Cow position:
               
chr11:3393426-3393065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
38-417
               

               
Cow position:
               
chr11:10687103-10686734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 109
               

               
Conread position:
               
38-417
               

               
Cow position:
               
chr11:29960089-29960446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
40, 31
               

               
Conread position:
               
38-417
               

               
Cow position:
               
chr11:31413235-31413613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
78, 169
               

               
Conread position:
               
38-417
               

               
Cow position:
               
chr11:80923550-80923170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 167
               

               
Conread position:
               
38-417
               

               
Cow position:
               
chr11:81300828-81300468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
39, 159
               

               
Conread position:
               
38-417
               

               
Cow position:
               
chr11:83357175-83357549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
39, 111
               

               
Conread position:
               
38-417
               

               
Cow position:
               
chr11:87155299-87155674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 148
               

               
Conread position:
               
38-418
               

               
Cow position:
               
chr11:68207053-68206692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
219, 39
               

               
Conread position:
               
38-420
               

               
Cow position:
               
chr11:21894369-21893993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
38-420
               

               
Cow position:
               
chr11:26117932-26117578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
38-421
               

               
Cow position:
               
chr11:30191954-30192338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 163
               

               
Conread position:
               
38-421
               

               
Cow position:
               
chr11:34120982-34121355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
40, 134
               

               
Conread position:
               
38-421
               

               
Cow position:
               
chr11:44222685-44223041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
38-421
               

               
Cow position:
               
chr11:65826947-65826594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
38-422
               

               
Cow position:
               
chr11:4732123-4732502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
39, 160
               

               
Conread position:
               
38-422
               

               
Cow position:
               
chr11:33349917-33349544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
39, 152
               

               
Conread position:
               
38-422
               

               
Cow position:
               
chr11:40467339-40466965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
39, 169
               

               
Conread position:
               
38-422
               

               
Cow position:
               
chr11:51293625-51293253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
38-422
               

               
Cow position:
               
chr11:70459359-70459715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
302, 34
               

               
Conread position:
               
38-424
               

               
Cow position:
               
chr11:13191004-13191396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
49, 163
               

               
Conread position:
               
38-425
               

               
Cow position:
               
chr11:39115278-39115634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 55
               

               
Conread position:
               
38-425
               

               
Cow position:
               
chr11:48544227-48544597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
121, 39
               

               
Conread position:
               
38-427
               

               
Cow position:
               
chr11:11469849-11469490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
220, 39
               

               
Conread position:
               
38-427
               

               
Cow position:
               
chr11:57725044-57724660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
39, 170
               

               
Conread position:
               
38-430
               

               
Cow position:
               
chr11:41986259-41985882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 40
               

               
Conread position:
               
38-430
               

               
Cow position:
               
chr11:49148833-49149212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
38-430
               

               
Cow position:
               
chr11:75177673-75178064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
102, 40
               

               
Conread position:
               
38-431
               

               
Cow position:
               
chr11:6400288-6399897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
40, 66
               

               
Conread position:
               
38-431
               

               
Cow position:
               
chr11:19487691-19487312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
92, 40
               

               
Conread position:
               
38-431
               

               
Cow position:
               
chr11:25791907-25791526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
38-431
               

               
Cow position:
               
chr11:46748082-46747692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 145
               

               
Conread position:
               
38-431
               

               
Cow position:
               
chr11:51687941-51687558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
84, 42
               

               
Conread position:
               
38-431
               

               
Cow position:
               
chr11:53778397-53778787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 54
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr11:1625430-1625054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
93, 40
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr11:6594464-6594061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
86, 46
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr11:8525329-8524950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 156
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr11:17227855-17227483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
189, 26
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr11:23251819-23251431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 168
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr11:25620611-25620222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr11:26535559-26535952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr11:32198724-32199111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
81, 53
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr11:33414018-33414405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 66
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr11:34145132-34144751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 91
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr11:45277372-45276980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 168
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr11:52381086-52380704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
234, 39
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr11:66041058-66041440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 40
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr11:66188536-66188153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr11:67600552-67600946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
39, 181
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr11:68910063-68909685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 40
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr11:70484077-70483683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 167
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr11:74316490-74316874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 60
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr11:75480242-75479854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 40
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr11:77750983-77750593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
231, 39
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr11:81143774-81143376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
39, 204
               

               
Conread position:
               
38-434
               

               
Cow position:
               
chr11:40792909-40792523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
212, 39
               

               
Conread position:
               
38-439
               

               
Cow position:
               
chr11:15285833-15285449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
38-439
               

               
Cow position:
               
chr11:60302173-60301802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
199, 39
               

               
Conread position:
               
38-447
               

               
Cow position:
               
chr11:73354269-73353883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
38-451
               

               
Cow position:
               
chr11:6580598-6581022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
40, 234
               

               
Conread position:
               
38-458
               

               
Cow position:
               
chr11:30708287-30708694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 39
               

               
Conread position:
               
38-458
               

               
Cow position:
               
chr11:30720882-30721292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
88, 39
               

               
Conread position:
               
38-458
               

               
Cow position:
               
chr11:33294007-33293589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
33, 143
               

               
Conread position:
               
38-458
               

               
Cow position:
               
chr11:34962846-34963260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
73, 41
               

               
Conread position:
               
38-461
               

               
Cow position:
               
chr11:15632775-15632367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 162
               

               
Conread position:
               
38-462
               

               
Cow position:
               
chr11:18698659-18699068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
40, 171
               

               
Conread position:
               
38-462
               

               
Cow position:
               
chr11:42836176-42835758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
81, 47
               

               
Conread position:
               
38-462
               

               
Cow position:
               
chr11:55333693-55334116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 167
               

               
Conread position:
               
38-462
               

               
Cow position:
               
chr11:61454750-61454308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 144
               

               
Conread position:
               
38-462
               

               
Cow position:
               
chr11:64044023-64044411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 166
               

               
Conread position:
               
38-463
               

               
Cow position:
               
chr11:15016830-15017253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
160, 40
               

               
Conread position:
               
38-467
               

               
Cow position:
               
chr11:53773457-53773885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 173
               

               
Conread position:
               
38-469
               

               
Cow position:
               
chr11:80564089-80564504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 69
               

               
Conread position:
               
38-470
               

               
Cow position:
               
chr11:42016854-42016432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 172
               

               
Conread position:
               
38-470
               

               
Cow position:
               
chr11:77758976-77758558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 132
               

               
Conread position:
               
38-473
               

               
Cow position:
               
chr11:77745466-77745039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
38-478
               

               
Cow position:
               
chr11:15772938-15772505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 97
               

               
Conread position:
               
38-479
               

               
Cow position:
               
chr11:11125448-11125881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 39
               

               
Conread position:
               
38-480
               

               
Cow position:
               
chr11:15503885-15504328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
39, 169
               

               
Conread position:
               
38-482
               

               
Cow position:
               
chr11:84385862-84385425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 177
               

               
Conread position:
               
38-485
               

               
Cow position:
               
chr11:5433052-5433486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
202, 39
               

               
Conread position:
               
38-494
               

               
Cow position:
               
chr11:44031784-44032243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 130
               

               
Conread position:
               
38-494
               

               
Cow position:
               
chr11:62620169-62620601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 37
               

               
Conread position:
               
38-499
               

               
Cow position:
               
chr11:36182473-36182923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 39
               

               
Conread position:
               
39-172
               

               
Cow position:
               
chr11:55348048-55348183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
39-193
               

               
Cow position:
               
chr11:6329031-6329187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 38
               

               
Conread position:
               
39-195
               

               
Cow position:
               
chr11:18591648-18591492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
39-196
               

               
Cow position:
               
chr11:84890967-84890809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
39-198
               

               
Cow position:
               
chr11:58990296-58990446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 38
               

               
Conread position:
               
39-200
               

               
Cow position:
               
chr11:37347259-37347424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
39-200
               

               
Cow position:
               
chr11:57111523-57111362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
39-202
               

               
Cow position:
               
chr11:36647146-36647304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
36, 137
               

               
Conread position:
               
39-202
               

               
Cow position:
               
chr11:59370800-59370959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 58
               

               
Conread position:
               
39-202
               

               
Cow position:
               
chr11:62808863-62808702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
39-213
               

               
Cow position:
               
chr11:63516609-63516784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
39-256
               

               
Cow position:
               
chr11:6154197-6154401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
39-299
               

               
Cow position:
               
chr11:8339619-8339369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
39-324
               

               
Cow position:
               
chr11:18341253-18340979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
38, 89
               

               
Conread position:
               
39-325
               

               
Cow position:
               
chr11:38874617-38874339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
80, 40
               

               
Conread position:
               
39-349
               

               
Cow position:
               
chr11:11232667-11232369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
243, 25
               

               
Conread position:
               
39-350
               

               
Cow position:
               
chr11:33341361-33341057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 38
               

               
Conread position:
               
39-373
               

               
Cow position:
               
chr11:37974711-37975044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
39-381
               

               
Cow position:
               
chr11:48271980-48272319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 168
               

               
Conread position:
               
39-381
               

               
Cow position:
               
chr11:59702270-59702610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
51, 33
               

               
Conread position:
               
39-381
               

               
Cow position:
               
chr11:73924773-73924446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
243, 38
               

               
Conread position:
               
39-387
               

               
Cow position:
               
chr11:33754114-33753785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
39-388
               

               
Cow position:
               
chr11:43430661-43430328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
298, 15
               

               
Conread position:
               
39-413
               

               
Cow position:
               
chr11:71868818-71868454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
39-422
               

               
Cow position:
               
chr11:19593604-19593977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
39-431
               

               
Cow position:
               
chr11:83066281-83066659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
39-432
               

               
Cow position:
               
chr11:43361011-43360619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 193
               

               
Conread position:
               
39-435
               

               
Cow position:
               
chr11:55744259-55744640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 60
               

               
Conread position:
               
39-439
               

               
Cow position:
               
chr11:45872533-45872135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 38
               

               
Conread position:
               
39-451
               

               
Cow position:
               
chr11:55761664-55762043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
39-461
               

               
Cow position:
               
chr11:4436118-4436527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
39-461
               

               
Cow position:
               
chr11:47899062-47899448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
42, 166
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr11:85723487-85723909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 39
               

               
Conread position:
               
39-489
               

               
Cow position:
               
chr11:29916323-29916768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
163, 41
               

               
Conread position:
               
40-148
               

               
Cow position:
               
chr11:83033914-83033805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
40-170
               

               
Cow position:
               
chr11:62376651-62376521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
40-180
               

               
Cow position:
               
chr11:47165351-47165215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 64
               

               
Conread position:
               
40-189
               

               
Cow position:
               
chr11:41809691-41809546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
37, 109
               

               
Conread position:
               
40-192
               

               
Cow position:
               
chr11:43593779-43593929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
40-200
               

               
Cow position:
               
chr11:71846562-71846401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
40-201
               

               
Cow position:
               
chr11:10992068-10992227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
40-213
               

               
Cow position:
               
chr11:5031991-5031816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
40-217
               

               
Cow position:
               
chr11:30110754-30110923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
33, 52
               

               
Conread position:
               
40-217
               

               
Cow position:
               
chr11:43914008-43914175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
79, 23
               

               
Conread position:
               
40-225
               

               
Cow position:
               
chr11:74929566-74929750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
37, 168
               

               
Conread position:
               
40-227
               

               
Cow position:
               
chr11:14094638-14094457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 58
               

               
Conread position:
               
40-304
               

               
Cow position:
               
chr11:48697234-48697486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
79, 37
               

               
Conread position:
               
40-312
               

               
Cow position:
               
chr11:8564188-8563913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 196
               

               
Conread position:
               
40-327
               

               
Cow position:
               
chr11:70273087-70273371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 52
               

               
Conread position:
               
40-338
               

               
Cow position:
               
chr11:27939273-27939558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
233, 37
               

               
Conread position:
               
40-345
               

               
Cow position:
               
chr11:8428281-8428595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
36, 52
               

               
Conread position:
               
40-351
               

               
Cow position:
               
chr11:65409371-65409068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
37, 165
               

               
Conread position:
               
40-360
               

               
Cow position:
               
chr11:26483505-26483803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 22
               

               
Conread position:
               
40-381
               

               
Cow position:
               
chr11:23138275-23137936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
23, 38
               

               
Conread position:
               
40-415
               

               
Cow position:
               
chr11:8988443-8988085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
40-417
               

               
Cow position:
               
chr11:30764266-30764645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
37, 175
               

               
Conread position:
               
40-420
               

               
Cow position:
               
chr11:33348398-33348038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
79, 37
               

               
Conread position:
               
40-422
               

               
Cow position:
               
chr11:70382909-70382531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
37, 111
               

               
Conread position:
               
40-424
               

               
Cow position:
               
chr11:45646806-45646433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
228, 7
               

               
Conread position:
               
40-425
               

               
Cow position:
               
chr11:9221939-9221561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
200, 104
               

               
Conread position:
               
40-430
               

               
Cow position:
               
chr11:36981354-36981731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
79, 40
               

               
Conread position:
               
40-432
               

               
Cow position:
               
chr11:6234092-6233710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 35
               

               
Conread position:
               
40-432
               

               
Cow position:
               
chr11:17889940-17889559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
30, 39
               

               
Conread position:
               
40-432
               

               
Cow position:
               
chr11:21844349-21843971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 144
               

               
Conread position:
               
40-432
               

               
Cow position:
               
chr11:35347971-35347583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
38, 177
               

               
Conread position:
               
40-451
               

               
Cow position:
               
chr11:13043355-13042961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 24
               

               
Conread position:
               
40-451
               

               
Cow position:
               
chr11:17860367-17859970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
79, 37
               

               
Conread position:
               
40-451
               

               
Cow position:
               
chr11:30639162-30638765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
37, 111
               

               
Conread position:
               
40-458
               

               
Cow position:
               
chr11:10095131-10095533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 29
               

               
Conread position:
               
40-462
               

               
Cow position:
               
chr11:62490220-62490618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
38, 52
               

               
Conread position:
               
40-470
               

               
Cow position:
               
chr11:2788166-2788601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
40-472
               

               
Cow position:
               
chr11:58102988-58102552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
38, 108
               

               
Conread position:
               
40-504
               

               
Cow position:
               
chr11:1486080-1485623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
90, 38
               

               
Conread position:
               
41-408
               

               
Cow position:
               
chr11:4207100-4207460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
41-432
               

               
Cow position:
               
chr11:42292048-42291672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 93
               

               
Conread position:
               
42-202
               

               
Cow position:
               
chr11:53719733-53719890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 50
               

               
Conread position:
               
42-212
               

               
Cow position:
               
chr11:83196287-83196455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 35
               

               
Conread position:
               
42-222
               

               
Cow position:
               
chr11:53130600-53130777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
77, 35
               

               
Conread position:
               
42-299
               

               
Cow position:
               
chr11:27386551-27386302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
77, 35
               

               
Conread position:
               
42-299
               

               
Cow position:
               
chr11:65430850-65431091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
42-319
               

               
Cow position:
               
chr11:24937450-24937722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
36, 77
               

               
Conread position:
               
42-349
               

               
Cow position:
               
chr11:50778159-50778454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
36, 163
               

               
Conread position:
               
42-350
               

               
Cow position:
               
chr11:16342453-16342141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
132, 86
               

               
Conread position:
               
42-350
               

               
Cow position:
               
chr11:44036504-44036807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
36, 162
               

               
Conread position:
               
42-377
               

               
Cow position:
               
chr11:47544916-47545247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
36, 157
               

               
Conread position:
               
42-391
               

               
Cow position:
               
chr11:69119088-69119420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
34, 103
               

               
Conread position:
               
42-402
               

               
Cow position:
               
chr11:81281733-81282091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
35, 283
               

               
Conread position:
               
42-409
               

               
Cow position:
               
chr11:1849377-1849016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
42-418
               

               
Cow position:
               
chr11:11557957-11558325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 36
               

               
Conread position:
               
42-422
               

               
Cow position:
               
chr11:3726074-3726445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
77, 43
               

               
Conread position:
               
42-422
               

               
Cow position:
               
chr11:31525652-31526038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
35, 157
               

               
Conread position:
               
42-422
               

               
Cow position:
               
chr11:35580042-35580419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
33, 156
               

               
Conread position:
               
42-431
               

               
Cow position:
               
chr11:27405280-27404904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
36, 106
               

               
Conread position:
               
42-431
               

               
Cow position:
               
chr11:50153030-50152646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 163
               

               
Conread position:
               
42-432
               

               
Cow position:
               
chr11:17036764-17036364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
36, 185
               

               
Conread position:
               
42-432
               

               
Cow position:
               
chr11:19247406-19247037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 35
               

               
Conread position:
               
42-432
               

               
Cow position:
               
chr11:20761633-20762020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
240, 154
               

               
Conread position:
               
42-432
               

               
Cow position:
               
chr11:35154039-35153652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
36, 163
               

               
Conread position:
               
42-451
               

               
Cow position:
               
chr11:65607905-65607502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
35, 167
               

               
Conread position:
               
42-452
               

               
Cow position:
               
chr11:40969-41354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
42-466
               

               
Cow position:
               
chr11:27746709-27747117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 164
               

               
Conread position:
               
42-466
               

               
Cow position:
               
chr11:83043572-83043169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
289, 36
               

               
Conread position:
               
43-367
               

               
Cow position:
               
chr11:68905279-68904973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
230, 13
               

               
Conread position:
               
45-200
               

               
Cow position:
               
chr11:60470388-60470232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
45-202
               

               
Cow position:
               
chr11:36286490-36286643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 47
               

               
Conread position:
               
45-202
               

               
Cow position:
               
chr11:36672259-36672095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
45-213
               

               
Cow position:
               
chr11:36301289-36301118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
45-213
               

               
Cow position:
               
chr11:71455579-71455750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 153
               

               
Conread position:
               
45-366
               

               
Cow position:
               
chr11:44636968-44636651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
45-381
               

               
Cow position:
               
chr11:952060-952386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 96
               

               
Conread position:
               
45-381
               

               
Cow position:
               
chr11:61958958-61958624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 144
               

               
Conread position:
               
45-399
               

               
Cow position:
               
chr11:43897929-43898274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 107
               

               
Conread position:
               
45-422
               

               
Cow position:
               
chr11:67931704-67931333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
32, 9
               

               
Conread position:
               
45-432
               

               
Cow position:
               
chr11:48474499-48474877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
45-451
               

               
Cow position:
               
chr11:65157616-65157222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
45-458
               

               
Cow position:
               
chr11:63434267-63433872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 155
               

               
Conread position:
               
45-461
               

               
Cow position:
               
chr11:26067388-26066996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
45-462
               

               
Cow position:
               
chr11:27248283-27248686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
415, 30
               

               
Conread position:
               
45-482
               

               
Cow position:
               
chr11:2907730-2907315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 153
               

               
Conread position:
               
46-202
               

               
Cow position:
               
chr11:31900840-31900993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 31
               

               
Conread position:
               
46-366
               

               
Cow position:
               
chr11:45631972-45631662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
35, 159
               

               
Conread position:
               
46-378
               

               
Cow position:
               
chr11:41812120-41811799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 101
               

               
Conread position:
               
46-381
               

               
Cow position:
               
chr11:25386858-25387184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
118, 18
               

               
Conread position:
               
46-408
               

               
Cow position:
               
chr11:23586427-23586784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
31, 127
               

               
Conread position:
               
46-415
               

               
Cow position:
               
chr11:46329290-46329652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
46-425
               

               
Cow position:
               
chr11:71493068-71492701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
32, 162
               

               
Conread position:
               
46-432
               

               
Cow position:
               
chr11:20238466-20238844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
31, 46
               

               
Conread position:
               
46-440
               

               
Cow position:
               
chr11:24601763-24602135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
32, 137
               

               
Conread position:
               
46-462
               

               
Cow position:
               
chr11:30165299-30165705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
31, 154
               

               
Conread position:
               
46-464
               

               
Cow position:
               
chr11:52297431-52297024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 159
               

               
Conread position:
               
46-484
               

               
Cow position:
               
chr11:72375896-72375447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
35, 161
               

               
Conread position:
               
46-489
               

               
Cow position:
               
chr11:62239541-62239961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
149, 21
               

               
Conread position:
               
47-222
               

               
Cow position:
               
chr11:64090293-64090117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
47-331
               

               
Cow position:
               
chr11:49231667-49231940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
30, 98
               

               
Conread position:
               
47-416
               

               
Cow position:
               
chr11:9463622-9463989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
30, 175
               

               
Conread position:
               
48-352
               

               
Cow position:
               
chr11:49934947-49934641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
49-329
               

               
Cow position:
               
chr11:10620531-10620261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 66
               

               
Conread position:
               
49-470
               

               
Cow position:
               
chr11:27913070-27913493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
70, 28
               

               
Conread position:
               
50-202
               

               
Cow position:
               
chr11:68570876-68570719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
69, 27
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr11:32749904-32750214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
27, 151
               

               
Conread position:
               
50-381
               

               
Cow position:
               
chr11:27932062-27932401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
27, 105
               

               
Conread position:
               
50-432
               

               
Cow position:
               
chr11:24438431-24438051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
26, 116
               

               
Conread position:
               
52-257
               

               
Cow position:
               
chr11:79666990-79666785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 25
               

               
Conread position:
               
52-434
               

               
Cow position:
               
chr11:14470169-14470531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
52-455
               

               
Cow position:
               
chr11:68912941-68913330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
52-488
               

               
Cow position:
               
chr11:64077703-64077281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
53-402
               

               
Cow position:
               
chr11:34113062-34113400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
24, 67
               

               
Conread position:
               
54-422
               

               
Cow position:
               
chr11:38071154-38071502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
23, 156
               

               
Conread position:
               
54-456
               

               
Cow position:
               
chr11:41215544-41215921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
23, 38
               

               
Conread position:
               
56-365
               

               
Cow position:
               
chr11:80761581-80761275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
21, 143
               

               
Conread position:
               
57-462
               

               
Cow position:
               
chr11:3920501-3920106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 20
               

               
Conread position:
               
58-422
               

               
Cow position:
               
chr11:83397701-83398065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
20, 170
               

               
Conread position:
               
58-462
               

               
Cow position:
               
chr11:70601019-70600633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 157
               

               
Conread position:
               
58-477
               

               
Cow position:
               
chr11:36058610-36059005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
216, 19
               

               
Conread position:
               
59-301
               

               
Cow position:
               
chr11:48042233-48041994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
60-432
               

               
Cow position:
               
chr11:2874192-2874570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 142
               

               
Conread position:
               
61-433
               

               
Cow position:
               
chr11:37804746-37804383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
62-217
               

               
Cow position:
               
chr11:10076577-10076729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
57, 15
               

               
Conread position:
               
62-363
               

               
Cow position:
               
chr11:77128468-77128761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
62-434
               

               
Cow position:
               
chr11:13592542-13592909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
62-479
               

               
Cow position:
               
chr11:48383333-48383742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
8, 39
               

               
Conread position:
               
63-429
               

               
Cow position:
               
chr11:20684770-20684405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
14, 145
               

               
Conread position:
               
66-419
               

               
Cow position:
               
chr11:26144287-26143939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
66-478
               

               
Cow position:
               
chr11:66572691-66572281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
65, 150
               

               
Conread position:
               
69-431
               

               
Cow position:
               
chr11:34646404-34646762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
12, 82
               

               
Conread position:
               
70-415
               

               
Cow position:
               
chr11:2917772-2917442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
8, 135
               

               
Conread position:
               
70-432
               

               
Cow position:
               
chr11:77705573-77705918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
11, 51
               

               
Conread position:
               
72-395
               

               
Cow position:
               
chr11:70086141-70086459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
47, 149
               

               
Conread position:
               
74-385
               

               
Cow position:
               
chr11:39118579-39118874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
170, 10
               

               
Conread position:
               
74-432
               

               
Cow position:
               
chr11:45282746-45283095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
45, 102
               

               
Conread position:
               
74-470
               

               
Cow position:
               
chr11:2083957-2084346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
75-211
               

               
Cow position:
               
chr11:18399512-18399371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 25
               

               
Conread position:
               
75-300
               

               
Cow position:
               
chr11:67136620-67136393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
75-305
               

               
Cow position:
               
chr11:30596807-30597036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
55, 11
               

               
Conread position:
               
75-356
               

               
Cow position:
               
chr11:71501317-71501039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 129
               

               
Conread position:
               
75-378
               

               
Cow position:
               
chr11:40573514-40573220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
36, 132
               

               
Conread position:
               
75-387
               

               
Cow position:
               
chr11:16233116-16232810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
165, 94
               

               
Conread position:
               
76-361
               

               
Cow position:
               
chr11:8148076-8147800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
171, 74
               

               
Conread position:
               
78-381
               

               
Cow position:
               
chr11:63909835-63909548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
41, 78
               

               
Conread position:
               
80-357
               

               
Cow position:
               
chr11:60143474-60143205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
80-369
               

               
Cow position:
               
chr11:1157469-1157749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 120
               

               
Conread position:
               
80-379
               

               
Cow position:
               
chr11:30954823-30955117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
50, 125
               

               
Conread position:
               
80-420
               

               
Cow position:
               
chr11:30830791-30830462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 124
               

               
Conread position:
               
80-431
               

               
Cow position:
               
chr11:38670507-38670857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 119
               

               
Conread position:
               
80-432
               

               
Cow position:
               
chr11:28993904-28993580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
193, 19
               

               
Conread position:
               
80-470
               

               
Cow position:
               
chr11:7873972-7874343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
81-256
               

               
Cow position:
               
chr11:15525779-15525959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
81-434
               

               
Cow position:
               
chr11:1380507-1380847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
81-447
               

               
Cow position:
               
chr11:42296791-42296443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
332, 5
               

               
Conread position:
               
82-314
               

               
Cow position:
               
chr11:53511908-53512134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
37, 126
               

               
Conread position:
               
85-199
               

               
Cow position:
               
chr11:29266370-29266485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
85-222
               

               
Cow position:
               
chr11:18509189-18509051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 121
               

               
Conread position:
               
85-323
               

               
Cow position:
               
chr11:41176120-41175888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
149, 121
               

               
Conread position:
               
85-376
               

               
Cow position:
               
chr11:16907213-16906937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
250, 43
               

               
Conread position:
               
85-423
               

               
Cow position:
               
chr11:30209991-30209661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
156, 43
               

               
Conread position:
               
85-432
               

               
Cow position:
               
chr11:77319242-77319580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
185, 121
               

               
Conread position:
               
86-480
               

               
Cow position:
               
chr11:69844200-69844585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
88-373
               

               
Cow position:
               
chr11:40479022-40478742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
33, 121
               

               
Conread position:
               
88-431
               

               
Cow position:
               
chr11:8545180-8544849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
88-432
               

               
Cow position:
               
chr11:64104226-64103883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 64
               

               
Conread position:
               
88-458
               

               
Cow position:
               
chr11:6245154-6245511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
36, 110
               

               
Conread position:
               
88-463
               

               
Cow position:
               
chr11:45619182-45619552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
89-373
               

               
Cow position:
               
chr11:7460784-7460503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
90-202
               

               
Cow position:
               
chr11:63499489-63499375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
90-417
               

               
Cow position:
               
chr11:39499193-39499508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
182, 57
               

               
Conread position:
               
91-422
               

               
Cow position:
               
chr11:42919392-42919058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
196, 45
               

               
Conread position:
               
91-432
               

               
Cow position:
               
chr11:51729124-51729442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
179, 71
               

               
Conread position:
               
92-463
               

               
Cow position:
               
chr11:48295869-48296223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
87, 55
               

               
Conread position:
               
92-469
               

               
Cow position:
               
chr11:76889885-76890251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
33, 93
               

               
Conread position:
               
92-470
               

               
Cow position:
               
chr11:80556057-80556421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
93-202
               

               
Cow position:
               
chr11:29786768-29786658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
93-479
               

               
Cow position:
               
chr11:80756946-80756580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 114
               

               
Conread position:
               
94-458
               

               
Cow position:
               
chr11:59862051-59862400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
95-361
               

               
Cow position:
               
chr11:20602067-20602325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
27, 79
               

               
Conread position:
               
96-430
               

               
Cow position:
               
chr11:71390723-71390408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
173, 108
               

               
Conread position:
               
98-353
               

               
Cow position:
               
chr11:55494522-55494770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
159, 74
               

               
Conread position:
               
99-468
               

               
Cow position:
               
chr11:32126454-32126816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
31, 66
               

               
Conread position:
               
100-432
               

               
Cow position:
               
chr11:63435362-63435690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 106
               

               
Conread position:
               
102-432
               

               
Cow position:
               
chr11:7273382-7273070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
150, 91
               

               
Conread position:
               
103-468
               

               
Cow position:
               
chr11:32254371-32254011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
104-425
               

               
Cow position:
               
chr11:84228865-84228562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
23, 59
               

               
Conread position:
               
106-409
               

               
Cow position:
               
chr11:45742232-45742520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
107-400
               

               
Cow position:
               
chr11:61560774-61560489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
107-416
               

               
Cow position:
               
chr11:68112411-68112107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
165, 20
               

               
Conread position:
               
110-431
               

               
Cow position:
               
chr11:49057257-49057550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
110-471
               

               
Cow position:
               
chr11:23407316-23407663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
146, 94
               

               
Conread position:
               
111-379
               

               
Cow position:
               
chr11:69075764-69076025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 93
               

               
Conread position:
               
112-451
               

               
Cow position:
               
chr11:21422079-21421750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 87
               

               
Conread position:
               
114-451
               

               
Cow position:
               
chr11:48428964-48429306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 134
               

               
Conread position:
               
115-432
               

               
Cow position:
               
chr11:5211879-5211558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
96, 140
               

               
Conread position:
               
119-422
               

               
Cow position:
               
chr11:62788992-62789285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
150, 79
               

               
Conread position:
               
119-458
               

               
Cow position:
               
chr11:5201776-5201456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
100, 28
               

               
Conread position:
               
120-422
               

               
Cow position:
               
chr11:76652887-76653179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
121, 24
               

               
Conread position:
               
120-431
               

               
Cow position:
               
chr11:64009586-64009893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
137, 14
               

               
Conread position:
               
120-432
               

               
Cow position:
               
chr11:59024489-59024185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
154, 75
               

               
Conread position:
               
120-439
               

               
Cow position:
               
chr11:63202382-63202074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
140, 31
               

               
Conread position:
               
120-462
               

               
Cow position:
               
chr11:48659797-48660124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
125, 8
               

               
Conread position:
               
120-470
               

               
Cow position:
               
chr11:40794486-40794145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
120-478
               

               
Cow position:
               
chr11:13864233-13863889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
120, 39
               

               
Conread position:
               
121-424
               

               
Cow position:
               
chr11:18425372-18425079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
147, 23
               

               
Conread position:
               
121-432
               

               
Cow position:
               
chr11:40395304-40395604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
156, 50
               

               
Conread position:
               
121-432
               

               
Cow position:
               
chr11:70756348-70756642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
121-432
               

               
Cow position:
               
chr11:75285902-75285588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
128, 87
               

               
Conread position:
               
121-445
               

               
Cow position:
               
chr11:53462809-53463123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
148, 85
               

               
Conread position:
               
122-432
               

               
Cow position:
               
chr11:40608730-40608425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
162, 81
               

               
Conread position:
               
122-432
               

               
Cow position:
               
chr11:50472182-50472486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
128-415
               

               
Cow position:
               
chr11:13067798-13067512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
128-415
               

               
Cow position:
               
chr11:13162199-13162492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
128-432
               

               
Cow position:
               
chr11:47837186-47837487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
128-432
               

               
Cow position:
               
chr11:49873015-49872719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
128-486
               

               
Cow position:
               
chr11:52690649-52690302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
156, 75
               

               
Conread position:
               
129-385
               

               
Cow position:
               
chr11:33345317-33345566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
130, 82
               

               
Conread position:
               
129-463
               

               
Cow position:
               
chr11:81168158-81167834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
110, 80
               

               
Conread position:
               
130-439
               

               
Cow position:
               
chr11:47772517-47772207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
154, 21
               

               
Conread position:
               
130-470
               

               
Cow position:
               
chr11:13940066-13940389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 69
               

               
Conread position:
               
131-432
               

               
Cow position:
               
chr11:67615053-67614757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
93, 67
               

               
Conread position:
               
133-432
               

               
Cow position:
               
chr11:3739831-3740132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
106, 22
               

               
Conread position:
               
133-559
               

               
Cow position:
               
chr11:42066738-42067149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 34
               

               
Conread position:
               
134-422
               

               
Cow position:
               
chr11:29308461-29308740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
140, 19
               

               
Conread position:
               
134-431
               

               
Cow position:
               
chr11:47311106-47310817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
87, 62
               

               
Conread position:
               
135-431
               

               
Cow position:
               
chr11:26275078-26274799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
136-479
               

               
Cow position:
               
chr11:375335-375668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
48, 65
               

               
Conread position:
               
138-473
               

               
Cow position:
               
chr11:8669889-8670223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 60
               

               
Conread position:
               
142-425
               

               
Cow position:
               
chr11:31874979-31875255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
98, 41
               

               
Conread position:
               
151-420
               

               
Cow position:
               
chr11:30808706-30808436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
88, 75
               

               
Conread position:
               
152-463
               

               
Cow position:
               
chr11:63999193-63998891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
123, 51
               

               
Conread position:
               
152-470
               

               
Cow position:
               
chr11:16314769-16315082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
122, 45
               

               
Conread position:
               
154-455
               

               
Cow position:
               
chr11:67615348-67615065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
118, 39
               

               
Conread position:
               
155-413
               

               
Cow position:
               
chr11:53510604-53510352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
156-432
               

               
Cow position:
               
chr11:53816759-53817023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
117, 32
               

               
Conread position:
               
157-451
               

               
Cow position:
               
chr11:42160159-42159874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
65, 40
               

               
Conread position:
               
158-417
               

               
Cow position:
               
chr11:30370010-30370255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
82, 39
               

               
Conread position:
               
160-451
               

               
Cow position:
               
chr11:62813045-62812769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
124, 13
               

               
Conread position:
               
166-417
               

               
Cow position:
               
chr11:1067532-1067285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
109, 32
               

               
Conread position:
               
166-417
               

               
Cow position:
               
chr11:3715146-3715395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
32, 41
               

               
Conread position:
               
166-458
               

               
Cow position:
               
chr11:6642719-6643004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
131, 36
               

               
Conread position:
               
167-413
               

               
Cow position:
               
chr11:35926995-35926759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
72, 39
               

               
Conread position:
               
167-425
               

               
Cow position:
               
chr11:82289486-82289749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
56, 37
               

               
Conread position:
               
170-416
               

               
Cow position:
               
chr11:31410969-31410728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
171-409
               

               
Cow position:
               
chr11:36920664-36920429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
174-432
               

               
Cow position:
               
chr11:46922980-46922719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
28, 114
               

               
Conread position:
               
177-481
               

               
Cow position:
               
chr11:17721883-17721584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
179-418
               

               
Cow position:
               
chr11:4637250-4637021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 19
               

               
Conread position:
               
189-391
               

               
Cow position:
               
chr11:76835697-76835496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
203-454
               

               
Cow position:
               
chr11:1932555-1932302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
209-427
               

               
Cow position:
               
chr11:33409317-33409100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
50, 75
               

               
Conread position:
               
209-432
               

               
Cow position:
               
chr11:30867128-30867345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
209-432
               

               
Cow position:
               
chr11:39855067-39854854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
209-462
               

               
Cow position:
               
chr11:29659503-29659759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
9, 180
               

               
Conread position:
               
210-412
               

               
Cow position:
               
chr11:85571859-85571656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
49, 34
               

               
Conread position:
               
211-422
               

               
Cow position:
               
chr11:5416831-5417044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
211-462
               

               
Cow position:
               
chr11:37436039-37435791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
64, 51
               

               
Conread position:
               
213-470
               

               
Cow position:
               
chr11:63866710-63866454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
51, 167
               

               
Conread position:
               
214-432
               

               
Cow position:
               
chr11:56311646-56311432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
66, 60
               

               
Conread position:
               
215-462
               

               
Cow position:
               
chr11:68883669-68883918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 31
               

               
Conread position:
               
216-456
               

               
Cow position:
               
chr11:27907734-27907958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
217-432
               

               
Cow position:
               
chr11:7500696-7500917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 6
               

               
Conread position:
               
218-432
               

               
Cow position:
               
chr11:62811251-62811464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
219-417
               

               
Cow position:
               
chr11:8437733-8437534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
137, 23
               

               
Conread position:
               
219-432
               

               
Cow position:
               
chr11:18924700-18924915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
219-433
               

               
Cow position:
               
chr11:8684128-8683909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
219-454
               

               
Cow position:
               
chr11:54742126-54741893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 97
               

               
Conread position:
               
219-462
               

               
Cow position:
               
chr11:25119976-25119737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
220-421
               

               
Cow position:
               
chr11:80893738-80893939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
220-449
               

               
Cow position:
               
chr11:29786544-29786312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
5, 65
               

               
Conread position:
               
220-458
               

               
Cow position:
               
chr11:35723926-35724165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 30
               

               
Conread position:
               
221-417
               

               
Cow position:
               
chr11:35109581-35109384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
221-432
               

               
Cow position:
               
chr11:43914250-43914461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
221-495
               

               
Cow position:
               
chr11:3714782-3715045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
52, 38
               

               
Conread position:
               
223-646
               

               
Cow position:
               
chr11:5187896-5188311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
226-447
               

               
Cow position:
               
chr11:39057551-39057777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 113
               

               
Conread position:
               
234-431
               

               
Cow position:
               
chr11:21173464-21173270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
236-432
               

               
Cow position:
               
chr11:45350540-45350342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
246-461
               

               
Cow position:
               
chr11:25968869-25968654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
190, 28
               

               
Conread position:
               
250-461
               

               
Cow position:
               
chr11:36361653-36361448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
255-432
               

               
Cow position:
               
chr11:34968621-34968445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
255-473
               

               
Cow position:
               
chr11:46884366-46884583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
198, 0
               

               
Conread position:
               
260-422
               

               
Cow position:
               
chr11:47411837-47412000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
263-409
               

               
Cow position:
               
chr11:25783713-25783859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
10, 15
               

               
Conread position:
               
263-418
               

               
Cow position:
               
chr11:34136241-34136395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
263-422
               

               
Cow position:
               
chr11:60720455-60720296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
263-431
               

               
Cow position:
               
chr11:87172076-87171909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
263-432
               

               
Cow position:
               
chr11:2835859-2836028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
263-432
               

               
Cow position:
               
chr11:9836456-9836287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
263-434
               

               
Cow position:
               
chr11:60296731-60296908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
263-451
               

               
Cow position:
               
chr11:20117074-20117260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
263-458
               

               
Cow position:
               
chr11:80370115-80370309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
263-462
               

               
Cow position:
               
chr11:1980267-1980071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
263-463
               

               
Cow position:
               
chr11:86895377-86895567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
263-467
               

               
Cow position:
               
chr11:42084675-42084474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
263-481
               

               
Cow position:
               
chr11:17517399-17517619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
264-432
               

               
Cow position:
               
chr11:63695843-63695671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
67, 10
               

               
Conread position:
               
266-432
               

               
Cow position:
               
chr11:34778440-34778274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
276-432
               

               
Cow position:
               
chr11:76896361-76896205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
278-463
               

               
Cow position:
               
chr11:41278201-41278382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
279-430
               

               
Cow position:
               
chr11:30600175-30600024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
279-432
               

               
Cow position:
               
chr11:21830193-21830043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
279-432
               

               
Cow position:
               
chr11:34644671-34644826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
54, 42
               

               
Conread position:
               
279-432
               

               
Cow position:
               
chr11:68570364-68570213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
279-458
               

               
Cow position:
               
chr11:81041953-81041771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
279-461
               

               
Cow position:
               
chr11:26442488-26442305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
279-469
               

               
Cow position:
               
chr11:66939576-66939391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
280-434
               

               
Cow position:
               
chr11:6320115-6319961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
281-417
               

               
Cow position:
               
chr11:62889875-62889739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
281-422
               

               
Cow position:
               
chr11:12555287-12555146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
281-422
               

               
Cow position:
               
chr11:18509012-18508871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
281-431
               

               
Cow position:
               
chr11:26057632-26057480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
281-431
               

               
Cow position:
               
chr11:63407714-63407861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
281-431
               

               
Cow position:
               
chr11:63475654-63475504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
71, 78
               

               
Conread position:
               
281-432
               

               
Cow position:
               
chr11:26343120-26343270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
281-435
               

               
Cow position:
               
chr11:19549499-19549647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
281-455
               

               
Cow position:
               
chr11:69417420-69417595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
281-461
               

               
Cow position:
               
chr11:63484956-63485132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
155, 84
               

               
Conread position:
               
281-462
               

               
Cow position:
               
chr11:44619973-44620153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
281-463
               

               
Cow position:
               
chr11:37041990-37042169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
90, 139
               

               
Conread position:
               
281-465
               

               
Cow position:
               
chr11:35733065-35732880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
155, 89
               

               
Conread position:
               
281-465
               

               
Cow position:
               
chr11:81175615-81175801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
26, 80
               

               
Conread position:
               
281-470
               

               
Cow position:
               
chr11:7652048-7651860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
281-470
               

               
Cow position:
               
chr11:83028012-83028195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
94, 73
               

               
Conread position:
               
281-484
               

               
Cow position:
               
chr11:6094384-6094184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
155, 77
               

               
Conread position:
               
281-484
               

               
Cow position:
               
chr11:21590404-21590605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
79, 147
               

               
Conread position:
               
282-422
               

               
Cow position:
               
chr11:35922178-35922038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
20, 14
               

               
Conread position:
               
283-432
               

               
Cow position:
               
chr11:33369171-33369320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
283-432
               

               
Cow position:
               
chr11:63849931-63849782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
283-479
               

               
Cow position:
               
chr11:4621410-4621224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
286-405
               

               
Cow position:
               
chr11:46010230-46010111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
286-417
               

               
Cow position:
               
chr11:36300558-36300428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
286-432
               

               
Cow position:
               
chr11:44176619-44176761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
286-432
               

               
Cow position:
               
chr11:46314034-46314181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
287-432
               

               
Cow position:
               
chr11:62102423-62102278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
288-412
               

               
Cow position:
               
chr11:37100147-37100024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
291-462
               

               
Cow position:
               
chr11:30986667-30986835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
145, 79
               

               
Conread position:
               
291-462
               

               
Cow position:
               
chr11:51683244-51683410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
295-421
               

               
Cow position:
               
chr11:64096633-64096507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
36, 49
               

               
Conread position:
               
295-439
               

               
Cow position:
               
chr11:85986017-85985875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
297-475
               

               
Cow position:
               
chr11:33271465-33271635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
298-464
               

               
Cow position:
               
chr11:1265508-1265341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
302-464
               

               
Cow position:
               
chr11:68592057-68592215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
365-646
               

               
Cow position:
               
chr11:373228-372957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
249, 13
               

               
Conread position:
               
436-645
               

               
Cow position:
               
chr11:6729640-6729848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
439-638
               

               
Cow position:
               
chr11:7143425-7143628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
8, 29
               

               
Conread position:
               
451-631
               

               
Cow position:
               
chr11:35668457-35668278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
453-644
               

               
Cow position:
               
chr11:49218356-49218163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
160, 14
               

               
Conread position:
               
455-611
               

               
Cow position:
               
chr11:56796537-56796382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
456-612
               

               
Cow position:
               
chr11:21136808-21136962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
456-612
               

               
Cow position:
               
chr11:34136497-34136650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
461-612
               

               
Cow position:
               
chr11:19501968-19502116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
461-612
               

               
Cow position:
               
chr11:43646413-43646262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
130, 113
               

               
Conread position:
               
461-625
               

               
Cow position:
               
chr11:696349-696186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
153, 43
               

               
Conread position:
               
463-607
               

               
Cow position:
               
chr11:14941609-14941467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
466-616
               

               
Cow position:
               
chr11:50951560-50951707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
7, 47
               

               
Conread position:
               
467-595
               

               
Cow position:
               
chr11:45553764-45553889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
467-613
               

               
Cow position:
               
chr11:59366070-59365925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
467-617
               

               
Cow position:
               
chr11:62215187-62215038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
141, 45
               

               
Conread position:
               
467-646
               

               
Cow position:
               
chr11:50937740-50937555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
73, 8
               

               
Conread position:
               
468-586
               

               
Cow position:
               
chr11:35775343-35775460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
468-595
               

               
Cow position:
               
chr11:61427600-61427724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
468-611
               

               
Cow position:
               
chr11:11752511-11752369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
468-611
               

               
Cow position:
               
chr11:64905004-64905145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
468-612
               

               
Cow position:
               
chr11:5648750-5648887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
468-612
               

               
Cow position:
               
chr11:11785338-11785481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
468-612
               

               
Cow position:
               
chr11:35881916-35882059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
468-612
               

               
Cow position:
               
chr11:54244680-54244821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
468-623
               

               
Cow position:
               
chr11:6041744-6041592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
468-625
               

               
Cow position:
               
chr11:48900839-48900675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
468-626
               

               
Cow position:
               
chr11:20491575-20491729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
468-626
               

               
Cow position:
               
chr11:29978331-29978168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
86, 108
               

               
Conread position:
               
468-626
               

               
Cow position:
               
chr11:52832715-52832563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
146, 44
               

               
Conread position:
               
468-626
               

               
Cow position:
               
chr11:72869812-72869656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 17
               

               
Conread position:
               
468-631
               

               
Cow position:
               
chr11:50953557-50953393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
146, 45
               

               
Conread position:
               
468-635
               

               
Cow position:
               
chr11:32438945-32438778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
146, 44
               

               
Conread position:
               
468-637
               

               
Cow position:
               
chr11:14046070-14045909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
468-639
               

               
Cow position:
               
chr11:16232931-16232756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 107
               

               
Conread position:
               
468-640
               

               
Cow position:
               
chr11:15592776-15592599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 111
               

               
Conread position:
               
468-641
               

               
Cow position:
               
chr11:40269588-40269417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
128, 18
               

               
Conread position:
               
468-645
               

               
Cow position:
               
chr11:54134080-54133901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
146, 70
               

               
Conread position:
               
468-646
               

               
Cow position:
               
chr11:44609571-44609744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
146, 34
               

               
Conread position:
               
469-633
               

               
Cow position:
               
chr11:19259506-19259338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
145, 104
               

               
Conread position:
               
469-645
               

               
Cow position:
               
chr11:27722399-27722577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
145, 105
               

               
Conread position:
               
469-648
               

               
Cow position:
               
chr11:62574002-62573824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
61, 88
               

               
Conread position:
               
471-612
               

               
Cow position:
               
chr11:32072154-32072291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
472-608
               

               
Cow position:
               
chr11:62599212-62599346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
472-610
               

               
Cow position:
               
chr11:19586468-19586607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 104
               

               
Conread position:
               
472-612
               

               
Cow position:
               
chr11:56821233-56821094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
472-645
               

               
Cow position:
               
chr11:41272147-41272324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
142, 101
               

               
Conread position:
               
473-623
               

               
Cow position:
               
chr11:13219072-13219220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
473-627
               

               
Cow position:
               
chr11:78818250-78818404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
135, 13
               

               
Conread position:
               
473-648
               

               
Cow position:
               
chr11:67871593-67871409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
141, 100
               

               
Conread position:
               
475-611
               

               
Cow position:
               
chr11:24216151-24216284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
475-612
               

               
Cow position:
               
chr11:19606327-19606460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
475-634
               

               
Cow position:
               
chr11:8828619-8828457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
139, 37
               

               
Conread position:
               
475-646
               

               
Cow position:
               
chr11:23047751-23047579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
139, 28
               

               
Conread position:
               
476-632
               

               
Cow position:
               
chr11:31422745-31422899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
477-641
               

               
Cow position:
               
chr11:22009372-22009208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
134, 96
               

               
Conread position:
               
484-646
               

               
Cow position:
               
chr11:7333089-7332926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
6, 29
               

               
Conread position:
               
485-646
               

               
Cow position:
               
chr11:47193537-47193699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
129, 27
               

               
Conread position:
               
494-636
               

               
Cow position:
               
chr11:9368856-9369001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
510-612
               

               
Cow position:
               
chr11:52935834-52935731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               
Show alignments to all cow chromosomes.